>input_sequence_71122
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-----------------------------ATGTATCGGCACCACCCTACCGGCGAGTACCGGATACTAGTGTATGGTAAA
AACAAGGAAACCGATTATC---------------------------------------GTCATGAGGAGGAAATCTGTTT
CTATG---------------------ATGATGCCTGCTA-----------------------------------------
------------------------------------------CATCTTGGCATTGGGCTC----CGTCCAG------CCA
TTGAGGAACATCGGGTGCCCGCCGAAGGTTGAGCAACTGCTTTTACACCGTGAGGCTAC---G------ACAGCTGTTCT
GTTTCGTGGCAACCTGCATTGGCACATAGACCAAAATGAGACTGAAAGCAACATGATAGTGGTATTCGACACCACAGCTG
AGTCGTTCCGGCAGATGCATGCTCCAGTTGTTCCGGTTTTTAGAAATGTTCCTGCCTATGCTGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGCTAAGTTGTAATGAGGCCGCGGACACCATCGATATTTGGGTGTTGCA--GGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCTGGTCATTGAGATCAAGGTATTGTGTGGACAATATGATGATTGTTGGTA
TGCCGTGGTCATGCATGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAATGGCTACTTCAGATTGACATGGATG
GCAAGTTCGTCGCCACTTTCCATCGCCATTCACTCAGTCTTACT------------------------------------
-------------------------------------------------------------------------------A
AATTGCAGTTCAAACAAACTCTTGTTCCACATACTTTCTTTTTGACACTAGAATAA------------------------
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>chr3A_1_TraesCS3A01G465500
GGAACCTTTTGTTGTGCTTTTTGATTTGTAATATTATAACACTTCTGCTTCGGTAGTAATTATGTTTGCAGATCAATAAA
GCTAGCCACGGTGCGGGGCTCCCTAAAAAAG---ATTCATTATAGACTCAATG---------------------------
-------CAGACCAACAGGATATTCATGTCAGCTAATTTTTAAAAATTAAATATTCTATTAGTCTGTGGTGATCATGTGG
ATAAAAACATAATACTCTCTCTGTTTCTGAGTAAAATGAGTGAATCTACACTCTAAAATATGTCTATATATATCCGTATA
TGGTAGTTATTTGAAATCTCTAAAAAGACAAATATTTAAGAACGAAAGGAGTGTATTTCAAAGTCTCAAGCATTTTGTTT
GATTTTAAGAAAAAACAACCGAGTCTCTATTTCTGTGTAGTCCTTGCAACGAACCTGGATAAAGATAGAGCGAGTCCGTT
CCTGGTTACTAGGAGTACCCATTTCCTCACGACCACCACTTACTCCCGGTCCCGG------GACGTGGATCTGGCGATCG
ATCGGCAGCCTCCCAGCCGGCGACCATGGCGGATGCCACGAGCGCAGGAGCGACGCCTCTCCTCCCCGGCCTCCTCGACG
ACATCGTAATCTGTGAGATCCTTGTCCGCCTGCCCCCC-AAAGCCCTCCTACGCTGCCG------------CGCATGGCG
CCGCACCACCTCCACCCGCGACTTCCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTCCTCATCACCTCCGGCCAC---G
ATTACGGCGGCCGCCTCCACGACCGAGACCTCATCACCTACGACCATCGG---GCCCGGGCCGCCGGCGCCCAGCTGCAA
CACGTCGCCCAGCTTGACG---AGAGGGACTGTGGCCTGGTGGCCTGCTGCGACGGCCTCCTCCTCATTTCACACAACAT
GAACAGGAAGGATG---CCTGCTCCTCCATCTACAACCCGGCCACTC-TCAATACGCTCCCATACCTGCGCTTTGTGACT
CCAAGGTCAGTTGCAACCATATCTTGGGGATGTATCGGCACCACCCTACCGGCGAGTACCGGATACTAGTGTATGGTAAA
AACAAGGAAACCGATTATC---------------------------------------GTCATGAGGAGGAAATCTGTTT
CTATG---------------------ATGATGCCTGCTA-----------------------------------------
------------------------------------------CATCTTGGCATTGGGCTC----CGTCCAG------CCA
TTGAGGAACATCGGGTGCCCGCCGAAGGTTGAGCAACTGCTTTTACACCGTGAGGCTAC---G------ACAGCTGTTCT
GTTTCGTGGCAACCTGCATTGGCACATAGACCAAAATGAGACTGAAAGCAACATGATAGTGGTATTCGACACCACAGCTG
AGTCGTTCCGGCAGATGCATGCTCCAGTTGTTCCGGTTTTTAGAAATGTTCCTGCCTATGCTGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGCTAAGTTGTAATGAGGCCGCGGACACCATCGATATTTGGGTGTTGCA--GGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCTGGTCATTGAGATCAAGGTATTGTGTGGACAATATGATGATTGTTGGTA
TGCCGTGGTCATGCATGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAATGGCTACTTCAGATTGACATGGATG
GCAAGTTCGTCGCCACTTTCCATCGCCATTCACTCAGTCTTACT------------------------------------
-------------------------------------------------------------------------------A
AATTGCAGTTCAAACAAACTCTTGTTCCACATACTTTCTTTTTGACACTAGAATAATA----GATGGTTCGTCTGAATG-
------------------TTGAT-GCTGT-----GATCTGGTGCTTCTTTATGTGCTAGATG-TTTGTACCTCTTCTGCT
GCAGTATGTA---TGAATCAGATCCACCATAA-GCCTACTAGCATCTTTGTAGATGCATATAAATTTATGATCAAGAAGC
TCACATTGTTTCCTATTTT-TTGCGATATATGCCTGTTTTTGACACCCTTCC---TTGACCGAAGTGATGGTTGTGCATG
TTGATTCTAATATTATCAAGTCATTTTGATGTGTGTTTGAAATGTGTGCTAACTACTCTGCGTGATG-TTCCTATTATCT
TTAACTGAAGAATTATTTTGCTCTTTT-AACTTGTGGTCTTCCTAGTATAATACGGAGTATTTACCAATCAACATGTGTT
CA-----ATCTTGACATAAGATTGAACTGGAGGAATTTATGCTTCCTCCAGTATTCAATTTCAACATAATATCAAGAACT
AAAACCTGTACTGATAAGCCGAAGAACGGCTTGTCAGGTCCTGCGTTGTGTTCCTGTTGAGACATTGTAACTGCCACCCA
----CATTTTTCTGTGCTGGCGTAGCAAGATCATCTCCACTACTGTTGGTGAAGGGAAGTTTTCTACTCATCTGGTCTAA
AGCAGAGGACAAGACCAT-CAATAATTATGTGGTGATGCAGTTGTACAAGCAAGTTGGAAGTTCCTTCTCATCATTTAAA
TTGCTCCCTCTGTAGCTTTTTACAAGACGTTTAGTGAGTCCATGGCAGTGTCAACAAATGTCTTATATATTAAAGTTACA
AAGTACTCCCTCCGTCCGGAAATACTTGTCCTCGAAATGGATAAAATGGATGTATCTATAACTAAAATAAGTCCAGATAC
AACCATTTGGAGGACAAGTATTTTCGGACGGAGGGAGTATTGTTGAAGGATAACTGATCACTTGTTACTGCATATGTTTT
ATGTGCCAATGCAGGGGCAATTGTTCAGCTGCTCAAATTTAGGCGACTCTTCTTTTTGCATTTTGT-
>chr3B_12
TTGTGCT----------TTTTTGATTTGTAATAATATTATAAACGAT-----GTAGGAATCATGTTTGCTGATCAATAAA
GCTAGCCATGGTGCGGTGTTCCCTAAAAAAAGATATTCATTATAGATTCACTG---------------------------
-------CAGACCAACAGGATATTCATGTCAGCTAATTTTTTAAAATAAAATATTCTGTTAGTCTGTGGTGATCATGTGG
ATAAAAACATA---------------------------------------------------------------------
-----------------------------------------------------TATTTCAATTTCTCAAGCATTTTATTT
GATTTTAAGAAAAAATAACCGAGTCTCTATTTCTGTGTAGTCCTTGCAACGAACCTGGATAAAGATAGAGCGAGTCCGTT
CCTGGCTACTAGGAGTATCCATTTCCTCACGACCACCACTTACTCC------CGG------GACGTGGATCTGGCGATCG
ATCGGCAGCCTCCCAGCCGGCGACCATGGCGGATGCCACGAGCGCAGGAGCGACGCCTCTCCTCCCTGGCCTCCTCGACG
ACATCGTAATCTGTGAGATCCTCGTCCGCCTGCCCCCC-AAAGCCCTCCTCCGCTGCCGCGCCGTCAGCCGCGCATGGCG
CCGCACCACCTCCACCCGCGACTTCCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTCCTCATCACCTCCGGCCAC---G
ATTACGGCGGCCGCCTCCACGACCGTGACCTCATCACCTACGACCATCGG---GCCCGGGCCGCCGGCGCCCAGCTGCAA
CACGTCGCCCAGCTTGACG---AGAGGGACTGTGGCCTGGTGGCCTGCTGCGACGGCCTCCTCCTCATTTCACACAACAT
AAACAGGAAGGATG---CCTGCTCCTCCATCTACAACCCGGCCACTCGTCAATGCGCTCCCATACCTGCGCTTTGTGACT
CCAAGGTCAGTTGCAACCATATCTTGGGGATGTATCGGCACCACCCTACCGGCGAGTACCGGATACTAGTGCATGGTAAA
AATAAGGAAACCGATT------------------------------------------ATCATGAGGAGGAAATCTATTT
TTATG---------------------ATGATGCCTGCTA-----------------------------------------
------------------------------------------CATCTTTGCATTGGGCTC----CGTCCAG------CCA
TTGAGGAACATCAGGTTCCCGCCGGAGATTGAGCAACTGCTTTTACACTGTGAGGCCGCCATG------ACAGCTGTTAT
GTTTGGTGGCAACCTGCATTGGCACATAGACCAAAATGAGACTGAAAGCAACATGATAGTGATATTCGACACCACAACTG
AGTCGTTCCGGCAGATGCATGCTCCAGTTGTTCCGGTTTTTAGAAATGTTCCTGCCTATGCTGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGCTAAGTTGTGATGAGGCCGCAAATACCATCGATATCTGGGTGTTGCGCGGGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAAGTGCCGGTCATTGAGATCAAGGCATTGTGTGGACAATATGACAATTGTTGGTA
TGCCGTAGTCATGCATGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAATGGCTACTTCAGATTGACATGGATG
GCAAGTTCGTCGCCACTTTCCATCGCCATTCACTCAGTCTTACT------------------------------------
-------------------------------------------------------------------------------A
AATTGCAGCTCAAACAAACTCTTGTTCCACATACTTTCTTTCTGACACTGGAATAATA----GATGGTTCGTCTGAATG-
------------------CTGAAGGCTGT-----GAGATGGTGCTTCTTTATGTGCTAGACG-TTTGTACCTCTTCTGCT
GCAATATGTA---TGAATCAGATCCACCATAA-GCTTATTAGCATCTTTGTTGATGCATATAAATTTATGATCAAGAAGC
TCACACTGTTTCCTGTTTT-TTGCAATCT-----------CGACACCCTTCC---TTGACCGAAGGGATGGTTGTGCATG
TTGATTCTAATATTATCAAGTCATTTTGATGTGTGTTTGAAATGTGTGCTAACTACTCTGCGTGATG-TTCCTATTATCT
TGAACTGAAGAATTATTTTGCTCCTTT-AATTTGTGGTCTTCTTGGTATAA-------TATTTACCAATCAACATGTGTT
CACTTTAATCTGAACATAAGATTGAACTGGAGGAATTTATGCTTCCTACAGTATTCAATTTTAACATAATATCAAGAACT
AAAACCTGTACTGATAAGCCGAGG-ACGGCTTGTCAGGTCCTGCGTTGTGTTCCTGTTGAGACATTGTAACTGCCAGCCA
TGTTCATTTTTCTGTGCTGACCTAGCAAGATCATCTCCGCTACTGTTGGGGAAAGGAAGTTTTTTACTCATCTTGTCTCA
AGCAGAGGACAAGACCGT-CAATTATTATGTGGTGATGCAGTTGTACAAGCAAGTTGAAAGTTCCTTCTCATCAATTGAA
TTAC----------------------------------------------------AATGTCTTATATGAAGTT------
--------------------------------------------------------------------------------
---------------------------ACAGAGGAAGTATTATTGAAGGATGACTGGGCACTTGTTACTACATATGTATT
ATGTGCCAGTGCAGGGGCAATTGTTCAGCTTCTCAAATTTAGGCGACTCTTCTTTTTGCATTTTGT-
>chr6D_53
----------------------------------------------------GTAGTAATTATGTTTGCAGATCAATAAA
GCTAGCCATCGTGTGGCGTTCGCTAAAAAAGGATATTCATTATAGATTCACTACATCTTCTAAAAAAACTACACTATAGA
TTCACTACAGACCAACAGAATATTCATGG-------------------------------------------TCACGTGG
ATAAAAACTTACTT------------------------------------------------------------------
-------------------------------------------------------TTTGAAAGTCTCAAGCATTTGGTTT
GATTTTAAGAAAAAA-AACCGACTCTCTATTTTTGTGTACTCCTTGCAACGAACCTGGATAAAGATGGAGCCAGTCCATT
-----------------------TCCTGAAGACTCCTCACTCCACGACCATGGAACGACCACGGCGGATCTGG-----CG
ATCGGCAGCCTCCCAGCCGGCGACCATGGCGGATGCCACGAGCGCAGGAGCGACGCCTCTCCTCCCTGGCCTCCTCGACG
ACGTCGTAATCTGTGAGATCCTTGTCCGCCTGCCCCCC-AAAGCCATCCTCCGCTGCCGCGCCGTCAGCCGTGCCTGGCG
CCGCACCACCTCCACCCGCGACTTCCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTCCTCATCACCTCCGGCCAC---A
GTTACGGCGGCCGCCTCCACGACCGAGACCTCATCACCTACGACCATCG---------GGCCGCCGACGCCCAGCTGCAA
CACGTCGCCCAGCTTGACG---AGAGGGACTGTGGCCTGGTGGCCTCCTGCGACGGCCTCCTCCTCATCTCACATAACAG
GTACAGCAAGGATG---CCTGCTCCTCCATCTACAACCCAGCCACTCATCAACACGCTCCCATGCCTGCGCTTTGTGACT
TCAAGGTCCGTTGCACGG---TCTTGGGGATGTATCGGCACCACCCTCCCGGCGAGTACCCGATACTATGGTATCGTATA
AATGAGGAAACCGATGATCATGAGGAGGAAA---------------------TCGATGATCATGAGGAGGAAACCTATTT
TTATG---------------------ATGATGCCTACTACTCCCTCTGTAAACTAATATAAGAGTGTTTAGATAACTAAA
ATAGTAATCTAAATACTCTTATATTAGTTTACGGAGGGAGTACATCTTTGCATTGGACTC----CGTCCAG------CCG
TTGAGGAACATCAGGTGCCCGCCGGAGGTTGAGCAAGTGCTTTTACACCGTGAGGCTAC---G------GCAGCTGTTCT
GTTTCGTGGCAACCTGCATTGGCACATAGAACAAAATGAGACTGAAAGCAACATGATGGTGATCTTCAACACCACAGCTG
AGTCGTTCCGGCAGATGCATGCTCTGGTTGTTCTGGCTTATAAAAATGATCTTGCCTACGCGGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGTTTAGTTGTAATGGGGCCGCGAATACCATTGATATCTGGGTGTTGCA--GGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCCGGTCACTGAGATCAAGGTGTTGTGTGGAGAACCTGACAATTGTTGGCA
TGCGGTAGTCATGTCTGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAGTGGCTACTTCAGATTGACATGGATG
GTAAGTTCGTTGCCACTTTCCATAACAAGTCACTCAGTCTTAC-------------------------------------
------------------------------------------------------------------------------AA
ATTTTCATCTCAAACAAACTCTTGTTCCACATACTTTCTTTCCGACACTAGAATAATAAATAGATGGTTCGTCTGAACG-
------------------CTGAAGACTGTTGAGTGAACTGGTGCTTCTTTATGTCCTAGACG-TTTGTACCTCTTCTGCT
GCAATATGTA---TGAATCAGATCCACCATAA-GCCTACTAGCATCTTTGTTGATGCATATAAATTTATGATCAAGAAAC
TCACACTGTTTCGTGTTTT-GTGCAATCTATGCCTGTTTTCGACACCATTCC---TTGAAGGAAGTGACGGTTGTGCATG
TTGATTCTAAAACTATCAAGTCATTTTGATGTGTGTTTGAAATGTGTGCTAACTACCCTGCGTGATG-TTCCTATTATCT
TGAACTGGAGAATTATTTTGCTCTGTT-----------------------------------------------------
CA-----ATCTTGACATAAGATTGAACTGGAGGAATTTATGCTTCCTCCAGTATTCAACTTCAACATAATATC--GAACT
AAAACCTGTACTGATAAGCCGAACAACGGCTTGTCAGGTCCCACA-TGTGTTCCTGTTGAGACATTGTAACTGCCAGCCA
TGTTCATTTTTCTCTGCTGGCATAGCAAGATCATCTCCGCTACTGTTGGTGAAGGGAAGTTTTCTACTCATCTGGTCTCA
AGCAGAGGACAAGACCATGCAATTATTACGTGGTGATGCAGTTGTACAAGCAAGTAGAAAGTTCCTTCTCATCATTTGAA
TTACTCCCTCTCAAGCTTTTTATAAGACGCTTTTAGAGTCCATGGCACTGTCAAAAAACGTCTTATATGAAGTT------
--------------------------------------------------------------------------------
---------------------------ACAGAGGAAGTATTATTGAAGGATGACTGGGCACTTGTTACTGCATATGTATT
ATGTGCCAGTGCAGGGGCAATTGTTCAGCTGCTCAAATTTAGGCGACTCTTCTTTTTTGCATTTTGT
>chr6B_53
----------------------------------------------------GTAGTAATTATGTTTGCAGATCAATAAA
GCTAGCCATCGTGTGGTGTTCCCAAGAAAAAGATATTCACTATAGATTCACTACATCTTCTAAAAAAACTACACTGTAGA
TTCACTACAGACCAACAGAATATTCATGG-------------------------------------------TCACGTGG
ATAAAAACTTACTT------------------------------------------------------------------
-------------------------------------------------------TTTGAAAGTCTCAAGCATTTGGTTT
GATTTTAAGAAAAAATAACTGA--CTCTATTTTTGTGTACTCCTTGCAACGAACCTGGATAAAGATGGAGCCAGTCCGTT
CCTGGTTACTAGGAGTATCCATTTCCTGAAGAC---------------CATGGAGCAACCACGGCGGATCGGG-----CG
ATCGGCAGCCTCCCAGCCGGCGACCATGGCGGATGCCACGAGCGCAGGAGCGACGCCTCTCCTCCCTGGCCTCCTCGACG
ACATCGTAATCTGTGAGATCCTTGTCCGCCTGCCCCCC-AAAGCCATCCTCCGCTGCCGCGCCGTCAGCCGTGCCTGGCG
CCGCACCACCTCCACCCGCGACTTCCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTCCTCATCACCTCCGGCCAC---A
GTTACGGCGGCCGCCTCCACGACCGAGACCTCATCACCTACGACCATCG---------GGCCGCCGACGCCCAGCTGCAA
CACGTCGCCCAGCTTGACG---AGAGGGACTGTGGCCTGGTGGCCTCCTGCGACGGCCTCCTCCTCATTTCACATAACAG
GTACAGCAAGGATG---CCTGCTCCTCCATCTACAACCCAGCCACTCATCAACACGCTCCCATGCCTGGGCTTTGTGACT
TCAAGGTCCGTTGCAGGG---TCTTGGGGATGTATCGGCACCACCCTACCGGCTAGTACCGGATACTATGTTATCGTATA
AATGAGGAAACCGATGATCATGAGGAGGAAATCGACGATAATGAGGAGGAAATTGATGATCATGAGGAGGAAACCTATTT
TTATG---------------------ATGATGCCTGCGTACATCTTTGCAA-----------------------------
-----------------------------------------------TTGCATTGGACTC----CGTCCAG------CCG
TTGAGGAACATCAGGTGCCCACCGGAGGTTGAGCAAGTGCTTTTACACCGTGAGGCTACA---------ACAGCTGTTCT
GTTTCGTGGCAACCTGCATTGGCACATAGAACAAAATGAGACTGAAAGCAACATGATAGTGATCTTCAACACCACAACTG
AGTTGTTCCGGCAAATGCATGCTCCAGTCGTTCCGGTTTATAAAAATGATCTTGCCTACGCTGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGTTTAGTTGTAATGGGGCCGCGAATACCATTCATATCTGGGTGTTGTA--GGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCCGGTCACTGAGATCAAGGTGTTGTGTGGAGAACCTGACAATTGTTGGCA
TGCGGTCGTCACGTCTGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAGTGGCTACTTCAGATTGACATGGATG
GTAAGTTTGTTGCCACTTTCCATAACAAGTCACTCAGTCTTACTCCCTCCGTCCGGAAATACTTGTCATCATAATAGATG
AAAATGAATGTATCTACAACTAAAATACATCTAGATACATCCATTTCAATGACAAGTATTTCCGGACGGAGGGAGTACAA
ATTTTCATCTCAAACAAACTCTTGTTCCACATACTTTCTTTCCGACACTAGAATAATA----GATGGTTCGTCTGAACG-
------------------CTGAAGACTGTTGAGTGAACTGGTGCTTCTTTATGTCCTAGACG-TTTGTACCTCTTCTGCT
GCAATATGTA---TGAATCAGATCCACCATAA-GCCTACTAGCATCTCTGTTGATGCATATAAATTTATGATCAAGAAGC
TCACATTGTTTCGTGTTTT-GTGCAATCTATGCCTGTTTTCGACATCATTCC---TTGAAGGAAGTGACGGTTGTGCATG
TTGATTCTAAAACTATCAAGTCATTTTGATGTGTGTTTGAAATGTGTGCTAACTACTCTGCGTGATG-TTCCTATTATCT
TGAACTGGAGAATTATTTTGCTCTTTTTAACTTGTGGTCTTCTTAGTATAA-------TATTTACCAATCAACATCTGTT
CA-----ATCTTGACATAAGATTGAACTGGAGGAATTTATGCTTCCTCCAGTATTCAATTTCAACATAATATCAAGAACT
AAAACCTGTACTGATAAGCCGAACAACGGCTTGTCAGGTCCCACG-CGTGTTCCTGTTGAGACATTGTAACTGCCAACCA
TGTTCATTTTTCTCTGCTGGCATAGCAAAATCATCTCCGCTACTGTTGGTGAAGGGAAGTTTTCTACTCATCTGGTCTCA
AGCAGAGGACAAGACCATGCAATTATTACGTGGTGATGCAGTTGCACAAGCAAGTAGAAAGTTCCTTCTCATCATTTGAA
TTACTCCCTCTCAAGCTTTTTATAAGACGTTTTTAGAGTCCATGGCGCTGTCAAAAAACGTCTTATATGAAGTT------
--------------------------------------------------------------------------------
---------------------------ACAAAGGAAGTATTATTGAAGGATGACTGGGCACTTGTTACTGCATATGTATT
ATGTGCCAGTGCAGGGGCAATTGTTCAGCTGCTCAAATTTAGGGGACTCTTCTGTTTGCATTTTGT-
>chr3D_351
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------AAGCATTTTGTTT
GAATTTAAGAAAAAATAACCGAG--TCTATTTCTGTGTAGTCCTTGCAACGAACCTGGATAAAGATAGAGCGAGTCCGTT
CCTGGTTACTAGGAGCATCCATTTCCTCACGACCACCACTTACTCC------CGGTCCCGGGACGTGGATCTGGCGATCG
ATCGGCAGCCTCCCAGCCGGCGACCATGGCGGATGCCACGAGCGCAGGAGCGCCGCCTCTCCTCCCTGGCCTCCTCGACG
ACATCGTAATCTGTGAGATCCTTGTCCGCCTGCCCCCC-AAGGCCCTCCTCCGCTGCCACGCCGTCAGCCGCGCATGGCG
CCGCACCACCTCCACCCGCGACTTCCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTCTTCATCACCTCCGGCCAC---G
ATTACGGCGGCCGCCTCCACGACCGGGACCTCATCACCTACGACCATCGG---GCCCGGGCCGCCGGCGCCCAGCTGCAA
CACGTCGCCCAGCTTGACG---AGAGGGACTGTGGCCTGGTGGCCTGCTGCGACGGCCTCCTCCTCATTTCACACAACAT
GAACAGGAAGGATG---CCTGCTCCTCCATCTACAACCCGGCCACTCGTCAATACGCTCCCATACCTGCGCTTTGTGACT
CCAAGGTCCGTTGCTCGG---TCTTGGGGATGTATCGGCACCACCCTACCGGCGAGTACCCGATACTAGTGTATGGTAAA
AATAAGGAAACCGCTTATC---------------------------------------GTCATGAGGAGGAAATCTGCTT
TTACG---------------------ATGATGCCTGCTA-----------------------------------------
------------------------------------------CATCTTTGCATTGGGCTC----CGTCCAG------CCA
TTGAGGAACATCGGGTGCCCGCCGGATGTTGAGCAACTGCTTTTACACCGTGAGGCTAC---G------ACAGCTGTTAT
GTTTCGTGGCAACCTGCATTGGCACATAGACCAAAATGAGACTGAAAGCAACATGATAGTGGTATTCGACACAACAGCTG
AGTCGTTCCGGCAGATGCATGCTCCAGTTGTTCCGGTTTTTAGAAATGTTCCTGCCTATGCTGACTTGTTTGACATGGAT
GGCGTGCTTGGCATGCTAAGTTGTGATGAGGCCGCGGATACCATCGATATCTGGGTGTTGCA--GGACTATGAAAGCGAG
GTCTGGACCTTCAAGTGCAAGATTGAAGTGCCGGTCATTGAGATCAAGGCATTGTGTGGACAATATGACGATTGTTGGTA
TGCCGTAGTCATGCATGTGGATGGTGAGTTGCTTGTGCTAGTCCAGTATGCCGAATGGCTACTTCAGATTGACATGGATG
GCAAGTTCGTCGCCACTTTCCATCGCCAGTCACTCAGTCTTACT------------------------------------
-------------------------------------------------------------------------------A
AATTGCAGCTCAAACAAACTCTTGTTCCACATACTTTCTTTCTGACACTAGAATAATA----TATGGTTCGTCTGAACA-
------------------CTGAAGACTGTTGAGTGAACTGGTGCTTCTTTATGTCCTAGACG-TTTGTACCTCTTCTGCT
GCAATATGTA---TGAATCAGATCCACCATAA-GCCTACTAGCATCTTTGTAGATGCATATAAATTTATGATCAAGAAGC
TCACACTGTTTCCTGTTTT-TTGCAATCT-----------CGACACCCTTCC---TTGACCGAAGTGATGGTTATGCATG
TTGATTCTAATATTATCAAGTCACTTTGATGTGTGTTTGAAATGTGTGCTAACTACTCTGCGTGATG-TTCCTATTATCT
TGAACTGAATAATTATTTTGCTCTTTT-AGCTTGTGGTCTTCTTGGTATAA-------TATTTACCAATCAACATGTGTT
CA-----ATCTGAACATAAGATTGAGCTGGAGGAATTTATGCTTCCTCCAGTATTCAATTTTAACATAATATCAAGAACT
AAAACCTGTACTGATAAGCCGAAGAACGGCTTGTCAGGTCCTGCGTTGTGTTCCTGTTGAGACATTGTAACTGCCAGCCA
----CATTTTTCTGTGCTGGCGTAGCAAGATCATCTCCGCTACTGTTGGTGAAGGGAAGTTTTCTACTCATCTGGTCTCA
AGCAGAGGACAAGACCAT-CAATTATTATGTGGTGATGCAGTTGTACAAGCAAGTTGGAAGTTCCTTCTCATCATTTGAA
TTACTCCCGCTGTAGCTTTTTACAAGACGTTTATAGAGTCCATGGCAGTGTCAAAAAACGTCTTATATTAA---------
--------------------------------------------------------------------------------
----------------------------------------------------ACTGATCACTTGTTACTGCATATGTTTT
ATGTGCCAATGCAGGGGCAATTGTTCAGCTGCTCAAATTTAGGCGACTCTTCTTTT--GCATTTTGT
>chr3D_530
CCAGGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CGGCGACCATGGCGGATGCCACTAGCGGAGGAACGATGCCTCTCTTACCTGGCCTCCCGGACG
ACATCGTGATCTGGGAGATCCTCGTCCGCCTGCCCCCCCAAAGCCCTTCTCCGCTGCCGCGCCGTCCACCCTTCCTGGCG
CCGCATCACCTCCACCCGCGGTTTCCTCCTCACCCACCACGCTCGCCAGCCCACCCTCCTCGTCGCCTCTGGTCACGATG
ATAACGGCAGCGGCGAATACTGCCGAGACATCATCGTTTTCGACCACCCG---GCCA---CCGCCGACGCCCAGCTCCAA
CACTTCACCCAGCTTGATG---AGAGGGACTGCAGCGTGGTAGCCTCCTGCGACGGCCTCCTCCTCCTTTCCTATG----
--ACACGGAGGGCG---CCTGCTTCTCCATCTGCAACCCGACCACTCATCAGTGCGCTCCCCTGCCGGTGCTTTGTGACT
TCATGAT---------GC---CCTTGGGAATGTACCGGCACCACCCCACGGGCGAGTACCGGATACTGCTGTATGATAAA
AATGAGGAA------------------GAAGT---------------------------------TGAGGAAATATATGT
CCGTG---------------------ATGGTGGTTGCTG-----------------------------------------
------------------------------------------CATCTTTGAATTGGGTTCCGTACGTCCAG------CCA
TCAAGGAACATCGGGTGCCCGCCCGAGGCGGAACAGGTGCTTTCACGCTGTGG---------GCATGGGGCAACTGTCTT
GTTACGTGGCAACATGCATTGGTACCTAGAGCAACGTGAGAATGGAAGCGACATGGTACTGGTATTCGACATCACAACTG
AGTCCTTTCGGCATATGCAGGCTCCAGTTGCTCAAGTTGCTCCAGACTTTCCTCTCTACAATGACCTGTTTGACATGGAC
GGCATGCTCGGCATGTTCAGCTGTAATGATGATGCGGCTATCATCGATATCTGGGTGTTGAA--GGACTATGAAAATATG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCCGGTTACTGAGATGAAGTTATTGTGTGGAGGACATGATGATTCCTTGTA
TGCGGTGGTCATACATGGGAATGGTGAGCTGCTCGTGCTAGTCCAGTTTGCTGGATGGCTACTTCAGGTTGACATGGAAG
GTAAGTTGGTCGGCAGTTTTCATCACGACAAAGTCATTGCTAGT------------------------------------
-------------------------------------------------------------------------------C
AGTTGCAGCTGAAGCAAACTCTTGTTCCACACACTTTCTTTCAGACACTATAATA-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_530
CCAGGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------CGGCGACCATGGCGGATGCCACTAGCGCAGGAGCGACGCCTCTCCTACCTGGCCTCCCGGATG
ACATCGTCATCTGGGAGATCCTCGTCCGCCTGCCG-CCCAAAGCCCTTCTCCGCAGCCGCGCCGTCCATCCTTCCTGGCG
CCGCATCACCTCCACCCGCGATTTCCTCCTCACCCACCACGCTCGCCAGCCCACCCTCCTCGTCGCCTCCGGTCAC---G
ATGACGGCAGCGGCGAATACTACCGAGACATCATTGTCTTCGGCCACCCGGCCGC------CGCCGACGCCCAGCTCGAA
CACTTCACCCAGCTTGATG---AGAGGGACTGCAGCGTGGTGGCCTCCTGCGACGGCCTCCTCCTCCTTTCCTATG----
--AGACGGAGGGCG---CCTGCTTCTCCATCTGCAACCCGGCCACTCATCAGTGCGCTCCCCTGCCGGTGCCTTGTGACC
TCATGAT---------GC---CCTTGGGAATGTACCGGCACCACCCCACGGGCGAGTACCGGATACTGATGTACGATAAA
AACGAGGAA------------------GAAA---------------------TTGAGGGTGAAAATGAGGAAATATATGT
CCGTG---------------------ATGGTGGTTGCTG-----------------------------------------
------------------------------------------CATCTTCGAATTGGGTTC----CGTCCAG------CCA
TCAAGGAACATCGGGTACCCGCCGGAGGCGGAACAAGTGCTTTCACGCTGTGG---------CCATGGGGCAGTCGTCTT
GTTACGTGGCAACATGCATTGGTACCTAGAGCAACGTGAGAATGGAGGCGACATGGTACTGGTATTCGACATCGCAACCG
AGTCGTTTCGGCATATGCAGGCTCCGGTTCTTCAAGTTGCTCCAGACTGTCCTCTCTACAATGACTTGTTTGACATGGAC
GGCACGCTCGGCATGTTCAGTTGCAATGATGATGCAGCTATCGTCGATATCTAGGTGTTGAA--GGACTATGAAAATGAG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCCGGTTATCGAGATCAAGTTATTGTGTGGAG---ATGATGATTCCTTGTA
TGTGGTGGTCATACATGGGGATGGTGAGTTGCTCGTGCTAGTCCAGTTTGCTGGATGGCTGCTTCAGGTTGACATGGAAG
GAAAGTTGGTCGGCAGTTTTCATCACGACAAAGTCATTGCTGGT------------------------------------
-------------------------------------------------------------------------------C
AATTGCAGCTGAAGCAAACTCTTGTTCCACACACTTTCTTTCAGACACTAGAATAGTA----TGTAGTCATTTATGTTGT
CTTTCATCT------------AAAGTTGTTGAGTGAGCTGGTGCTTCCTAATCTCTAGATGTTTGTATTCCTCTAGAGCT
GCAATGCGTA---CGAATGGGATCCAGTATGA-GCCTACTAGCATCTTTGTTGATGCAAATAAAGTTATGATCAATAAGC
TCTCACTATTTTGCGGTTTCGTGCAATCTATACATG-TTTTGACACCCTTCCATGTTGAAGAAAGTGACTGTTGTCCATG
TTGATTCTAAAGTTATCAGGCTCTTTTGATGTGCGTT-GAAATATGTGCAAACTATGCTACATGATG--------TTTCT
TGAACTGAAGAATTATTTTGCTCTTT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3D_536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGCGATCATGGCGGATGCCAGCAAACAACGAGCGACGGCTCACCACCACGGGCTCCGGGATG
AGATCGTGATCTGGGAGATCCTCGTCCGCCTGCCCCCC-AAATCCCTCCTCCGTTGCCGCGCCGTCTGCAGCGCCTGGCG
CCGCGCCACTTCCGCCCGCGACTTTCTCCTCGCCCACCACGCCCGCCAGCCCGCCCTTCCCATCGTCTCCGGCTAC---C
GTTACGGCGGGGATTACTACCACCGAGGCATCATCACCTTCGACCACCGG---GC------TGCCGACGCCCAGCTCCAA
CACGTCATCCAGCTTGACGTCGAGAGGTTCTGCCGTCTGGAGGCCTCCTGCGACGGCCTCCTCCTCCTCTCCTGTA----
--ACACGCCTGACGTCTCCTGCCTCTACATCTACAACCCGGCCACTCATCAGTACGCTACACTGCCGGTGCTGCGTGACT
TATTCAT---------GG---TCTTAGGAATGTACCGGCACCGCCCTACTGGCGAGTACCGGGTACTACTTATGT-----
-------------------------------------------------------------ATGAAAAGGAAATCAGGCC
CGGTCCAG---TCGTCGTCTGGGAACATGATACCTGCTG-----------------------------------------
------------------------------------------TATCTTCACATTGGGCTC----CATCCAG------CCG
CCCCGGAATATCGGGCGTCCGCCCAAGGCGGAGCAAGTGTGTTCACGTGGTGG---------G------GTGGCTCTCAT
GTTCCGTGGCAGCCTGCATTGGCACCTAAAGCAACATGGGACTGAAAGCAACATGATAGTGGTATTCGACACCACAACTG
AGTCGTTCAAGCAAATGCATGCTCCAGTGGCTTTGCGGC------------------ACGCTAAACTGTTTGAGATGGAT
GGCGTGCTCGGCATGTTCGATCGTAATGATGTTGGTGCTATCATCAATATATGGGAATTGCA--GGACTATGAAAACCAG
GTCTGGACCTTCAAGTGCAAGATTAAATTACCGGTTAATGAGATCATGGTGCTATGTCGAAATATCAACAGTTATTGGCA
TGCGGTGGTCATGCCTGGGGATGGCGAGTTGCTCGTGCTAGTCCAGTACGCCGAGTGGCTACTTCAGCTTGACATGGATG
GCAAGTTGGTTGCCAGCTTTCATCAACGGGAAGTCACTCCTACT------------------------------------
-------------------------------------------------------------------------------C
AACTGCAGCTCAAACAAACTCTTGTCCCACATACTTTCTTTCCAGATGG----------------------TTATGTTGT
GAATGCAGTGCCTCAGATCTGAAGGCTGCTGAGTGAGTTGGTGCTTCTTAACATCCTGATGTTTGCA-TCCTCAAGAGTT
GCAAGGTGTATGATGAATTGGATCAACTATGAGGCCTACTAGCGTCTTTGTTGATACATATAAAGTTATGATCAAGAAGC
TCTCACTGTTTTTTGGTTTCGTGCGACCCATACTTCTTTGA---------CCATGTTAACGGAAGTGGT--------ATG
TTAATTCTAAAGTAATCAAGTCCTCCTGATGTGCGTT-CAAATATGTGCTAATTATTCTACGTGATGTTTT-T-TTTTCT
TGAACTGAAGAATTGTTTTGCTCTTTT-AACTAATGGTCTTCTTAGTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GGCGATCATGGCGGATGCCAACAAACAACCAGCGACGGCTCACCACCACGGGCTCCCCGATG
AGATCGTGATCTGGGAGATCCTCGTCCGCCTGCCCTCC-AAATCCCTCCTCCGCTGCCGCGCCGTCTGCCGTGCGTGGCG
CCGCACCACCTCCACACGGGACTTCCTGCTCGCGCACCACGCCCGCCAGCCCGCCCTTCCCATCGTGTCCGGCTAC---G
GTTACGGCGGCCACTACTGCCACCGAGACATCATCACCTTCGACCAACGG---GC------TGTCGACGCCCAGCTCCAA
CACGTCATCCAGCTTGATGTCGAGAGGTCCTGTCGTCTGGAGGCCTCCTGCGACAGCCTCCTCCTCCTCTCCTGTA----
--ACACGCCTGACGCCTCCTGCATCTACATCTACAACCCGGCCACTCGTCAGTATGCTAGCGTGCCGGTGCTGCGTCAC-
--TTCAT---------GG---TCTTGGGGATGTACAGGCATCGCCCTACCGGCGAGTACCGGGTACTACTTATGT-----
-------------------------------------------------------------ATGAAAAAGAAATCGTGCT
CGGTCCAG---TCGTCGTCTGGGAACATGATACCTGCTG-----------------------------------------
------------------------------------------TATCTTCACACTGGGCTC----CATCCAG------CCG
TCACAGAACATCGGGCGTCCGCCCGAGGCGGAGCAAGTGTGTTCACGCGGTGG---------G------GTAGCTCTCAT
GTTCCGTGGCAGCCTGCATTGGCACCTAAAGCAACATGGGACTGAAAGCAACATGATAGTGGTATTTGACACCACAACTG
AGTCGTTCAAGCAAATGCATGCTCCAGTGGTTTTTCGGC------------------ATGCTAAACTGTTTGAGATGGAT
GGCGTGCTCGGCGTGTCCAGTCGTAATGATGTTGGTAGTATCATCAATATCTGGGAGTTGCA--GGACTATGAAAGCCAA
GTCTGGACCTTCAAGTGCAAGATTGAATTACCGGTTAATGAGATCAAGGTGCTATGTCGACAAATCGACAATTATTGGTA
TGCGGTGGTCATGCCTGGGGATGGTGAGTTGCTCGTGCTAGTCCAGTACGCCGAGTGGCTACTTCATCTTGACATGGATG
GCAAGTTGGTTGCTAGCTTTCATCAACGGGATGTCACTGCTACT------------------------------------
-------------------------------------------------------------------------------C
AATTGCAGCTCAAACAAACTCTTGTCCCACATACTTTCTTT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_538
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CGATCATGGCGGATGCCAGCAACCAACGAGCGACGGCTCACCACCACGGGCTCCCCGATG
AGATCGTGATATGGGAGATCCTCGTCCGCCTGCCCCCC-AAATCCCTCCTCCGCTGCCGCGCCGTCTGCGGCGCTTGGCG
CCGCGCCACCTCCGCCCGCGATTTCCTCCTCGCCCACCACGCCCACCAGCCCGCCCTTCCCATCGTCTCCGGCTAC---A
GTTACGGCGGCGGCTACTACGACCGAGACATCATCACCTTCGACCACCGG---GC------TGCCGACGCCCAGATCCAA
CACGTCATCCAGCTTGACGTCGAGAGGTTGTGCCGTCTGGAAGCCTCTTGCGACGGCCTCCTCCTCCTCTCCTGTA----
--ACACGCCTGACGCCTCCTGCCTCTACATCTACAACCCGGCCACTCGTCAGCACGCTACACTACCGGTGCTGCGTGACT
TATTCAT---------GG---TCTTAGGAATGTACCCACACCGCCCTACTGGCGAGTACCGGATACTACTTATGT-----
-------------------------------------------------------------ATAAAAAGGAGAACAGGCT
TGGTCCAG---TCGTCGTCCGGGAACATGATACCTGCTG-----------------------------------------
------------------------------------------TATCTTCACATTGGGCTC----CATCCAG------CCG
CCGCGGAATATCGGGCGTCCGCCCGAGGCGGAGCAAGTGTGTTCACGCGGTGG---------G------GTGGCTCTCAT
GTTCCGTGGCAGCCTGCATTGGCACCTAAAGCAACATGGGACTGAAAGCAACATGATAGTGGTATTCGACACCACAACTG
AGTCGTTCAAGCAAATGCATGCTCCAGTGGCTTTGCGGC------------------ACGCTAAACTGTTTGAGATGGAT
GGCGTGCTCGGCATGTTCGATCGTAATGATGTTGGTTCTATCATCAATATATGGGAATTGCA--GGACTATGAAAACCAG
GTCTGGACCTTCAAGTGCAAGATTAAATTACCGGTTAATGAGATCATGGTGCTATGTCGAAATATCAACAGTTATTGGCA
TGCGGTGGTCATACCTGGGGATGGTGAGTTGCTCGTGCTAGTCCAGTACGCCGAGTGGCTACTTCAGCTTGACATGGATG
GCAAGTTGGTTGCCAGCTTTCATCAACGGGAAGTCACTCCTACT------------------------------------
-------------------------------------------------------------------------------C
AACTGCAGCTCAAACAAACTCTTGTCCCACATACTTTCTTTCCAGATGG----------------------TTATGTTGT
GAATGCAGTGCCTCAGATCTGAAAGCTGCTGAGTGAGTTGGTGCTTCTTA-CATCCTGATGTTTGCA-TCCTCAAGAGTT
GCAAGGTGTATGATGAATTGGATCAACTATGAGGCCTACTAGCGTCTTTGTTGATACATATAAAGTTATGATCAAGAAGC
TTTCACTGTTTTTTGGTTTCGTGCGACCCATACTTCTTTGA---------CCATGTTAACGGAAGTGGT--------ATG
TTAATTCTAAAGTAATCAAGTCCTTCTGATGTGCGTT-CAAATATGTGCTAATTATTCTGCGTGATG-TTT-T-TTTTCT
TGAACTGAAGAATTGTTTTGCTCTTTT-AACTAATGGTCTTCTTAGTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3A_566
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGCGACGGCTCACCACCACGGGCTCCCCGATG
AGATCGTGATATGGGAGATCCTCGTCCGCCTGCCCCCC-AAATCCCTCCTCCGCTGCCGCACCGTCTGCAGCGCCTGGCG
CCGCGCCACCTCCGCCCGCAACTTCCTCCTCGCC-ACCACGCCCGCCAGCCAGCCCTTCCCATCGTCTCCGGCTAC---G
GTTACGGCGGCCACTACTGCCACCGAGACATCATCACCTTCGACCAACGG---GC------TGCCGACGCCCAGCTCCAA
CACGTCATCCAGCTTGACGTCGAGGGGTTCTGCCGTCTGGAGGCCTCCTGCGACGGCCTCCTCCTCCTCTCCTGTG----
--ACACGCCTGACGTCTCCTGCCTCTACATCTACAACCCGGCCACTCGTCAGTATACTACAGTGCCGGTGCTGCGTGACT
CATTCAT---------GG---TCTTAGGAATGTACTGGCACCGCCCTACTGGCGAGTACCGGGTACTACTTATGT-----
-------------------------------------------------------------ATGAAAAGGAAATCAGGCT
CCGTCCATTCATCGTCCTCCTGGAACATGATACCTGCTG-----------------------------------------
------------------------------------------TATCTTCACATTGGGCTC----CATCCAG------CCG
CCCCGGAATATCGGGCGTCCGCCCGAGGCGGAGCAAGTGTGTTCACGCGGTGG---------G------GTGGCTCTCAT
GTTCCGTGGCAGCCTGCATTGGCACATAGACCAAAATGAGACTGAAAGCAACATGATAGTGGTATTCGACACCACAACTG
AGTCGTTCAAGCAAATGCATGCTCCAGTGGCATTGCGGC------------------AAGCTAAACTGTTTGAGATGGAT
GGCGTGCTCGGCATGTTCGGTCGTAATGATGTTGGTGCTATCATCAATATATGGGAATTGCA--GGACTATGAAAACCAG
GTCTGGACCTTCAAGTGCAAGATTAAATTACCGGTTAATGAGATCATGGTGCTATGTCGAAATATCAACAGTTCTTGGCA
TGCGGTGGTCATGCCTGGGGATGGTGAGTTGCTCGTGCTAGTCCAGTACGCCGAGTGGCTACTTCAGCTTGACATGGATG
GCAAGTTGGTTGCCAGCTTTCATCAACGGGAAGTCACTCCCACT------------------------------------
-------------------------------------------------------------------------------C
AACTGCAGCTCAAACAAACTCTTGTCCCACATACTTTCTTTCCAGATGG----------------------TTATGTTGT
GAATGCAGTGCCTCAGATCTGAAGGCTGCTGAGTGAGTTGGTGCTTCTTAACATCCTGATGTTTGCA-TCCTCAAGAGTT
GCAAGGTGTATGATGAATTGGATCAACTATGAGGCCCACTAGCGTCTTTGTTGATACATCTAAAGTTATGATCAAGAAGC
TCTCACTGTTTTTTGGTTTCGTGCGACCCATACTTCTTTGA---------CCATGTTAACGGAAGTGGT--------ATG
TTAATTCTAAAGTAATCAAGTCCTTCTGATGTGCGTT-CAAATATGTGCTAATTATTCTACGTGATG-TTTTT-TTTTCT
TGAACTGAAGAATTGTTTTGCTCTTTT-AACTAATGGTCTTTTTAGTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3D_1100
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GATGCCTGCTA-----------------------------------------
------------------------------------------CATCTTCACATTGGGCTC----CGTCCAAGTCCAACCA
CCGAGGAACATCGGGTGGCAGCCGGAGGCGAAGGAAGTGTATTGCAGCAGTGG---------G------CAACCTGTCTT
ATTACGTGGCAGCCTGCATTGCCCCTCAGAGCAACGTGAGATTGGAAGCAACAATATCGTGGTTTTTGACACCTCAACCG
AATTGTTCCGGCAGATGCGCGCTCCAGTTGCTCCAGTTGCC---------CCTCGCTACAATGCGCTGTTTGAGATGGAT
CGTGTGCTCGGCATGTACATATGTAGTGATGGTGTAACTATCATTGATATCTGGATGTTGCT--GGACTATGAAAACGAG
GTCTGGACCTTCAAGTGCAAGATTGCATTGCCGGTTACTGAGATCAACATGATGTGTGGAATGCTTGAAGGTTCTAGGTA
TGCAGTGGTCGTGCCTGGAAATGGTGAGTTGCTCGTGCTGGTCAAATTTGCGGGGTGGCTACTTCAGGTTGACATGGATG
GCAAGTTGGTTGCCACTTTCCATCGCAAGGAAGTGTTTCCTACT------------------------------------
-------------------------------------------------------------------------------C
AATTGCAGCTCAAACAAACTCTTGTTCCACATGCTTTTTT-CCAACACTAGA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3A_1111
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CATCTTTGAATTGGGTTC----CGTCCAG------CCA
TCAAGGAACATCGGGTGCCTGCCGGAGGCGGAACAAGTGCTTTCACGCTGTGG---------GCATGGGGCAGTTATCTT
GTTACATGGCAACATGCATTGGTACCTAGAGCAACGTGAGAATGGAAGCGACATGGTACTTGTATTCGACACCACAACTG
AGTCGTTTCAGCATATGCAGGCTCCAGTTGTTCAAGTTGCTCCAGGCTTTCCTCTCTACAATGACCTGTTTGACATGGAC
GGCATGCTCGGCATGTTCAGCTGTAATGATGATGCGTCTATCATCGATATCTGGGTGTTGAA--GGACTATGAAAATATG
GTCTGGACCTTCAAGTGCAAGATTGAATTGCCGGTTACTGAGATGAAGTTATTGTGTGGAGGACATGATGATTCCTTGTA
TCCGGTGGTCATACATGGGGATGGTGAGTAGCTCGTGCTAGTCCAGTTTGCTGGATGGCTACTTCAGGTTGACATGGAAG
GTAAGTTGGTCGGCAGTTTTCATCACGACAAAGTCATTGCTAGT------------------------------------
-------------------------------------------------------------------------------C
AATTGCAGCTGAAACAAACTCTTGTTCCACACACTTTCTTTCAGACACTAGAATAGTA----CGTAGTTATTTATGTTGT
CTTTCATCT------------AAAGTTGTTGAGTGAGCTGGTGCTTCCTAATCTCTAGATGTTTGTATTCCTCTAGAGCT
GCAATATGTA---CGAATGGGATCCAGTATGA-GCCTACTAGCATCTTTGTTGATGCAAATAAAGTTATGATCAATAAGC
TCTCACTATTTTGCGGTTTCGTGCAATCTATACATG-TTTTGACACCCTTCCATGTTGAAGGAAGTGAATGTTGTCCATG
TTGATTCTAAAGTTATCAGGCTCTTTTGACGTGCGTT-GAAATATGTGCAAACTATTCTACATGATG--------TTTCT
TGAACTGAAGAATTATTCTGCTCTTTT-AACTAGTGTTCTTCATACTATA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>SNPs
SS-SS--SSSSSSSSSS----------------S---S-S-SSSSSSSSSSS----------------------------
--------S-------S-S---------------------------S---S-----------------------------
-----------------------------------------S-----S---------S----------------------
-----------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------
---------------S----------------------------------------------------------------
-----------------S----------------------------SSSSSS----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------S-----------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--------------------------------S--------------------------------------
------------------S---S-------------S-----------------------S-------------------
---S----------------------------------------------------------------------------
--------------S------------S----------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------------------------S--------SSSSSSS----------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------S---------------------------------------S-
-----------------------S-----------------------------------------------------S--
--S------------------------------SS-------------------S-------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S------S---------S----------------------------
-------------------------------------------------------------------
>forward_527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CACGACCACCACTTACTCCC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_2884
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TACTCCCTCCGTCCGGAAAT---------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
