>input_sequence_71094
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--ATGGCGAGTACCTTTCCCACCCCGACCCTCTTGACGCCCAAGCTGTCCCAGCCACCGCTCGGTCCTTCGCGCCGCAAC
GCTGCCGCTGCGGCTGCCCCGTGGCCGCATCGTGGGCGGATCAGCGCGACCACAGGAGGCGAAGCTGCCGCAGCAGCA--
-------------G------------------AAGCAAAGGCCAGGAAGGAGCAGAGGAAACGATGCCTGAGGTGCGGCG
CCCTGTACCTGGACGAGGACAACTCCGCTGCCGCCTGCGCCTTCCATGGCCACATCACCGGTAGGTACCGTATCAGCACC
ACTTACTGCTGCACTACACTACAGCACACTAGTTGCAAAATATCTTCAGGTTGCGGTTGAGCTTGCGACTCTGTGCGCGC
TGTGTGCCACGAACGTCCTGGGC------------------------------------CATACGACTGCCGCGGCCTAT
GCAAAACTACAGGGCCGAGGAGCTACCCGAGGCCCGTTTGAGAGTGGACACATGCGTGTTTGTGTTACAGGTGAGAAGGG
GCTGTTTTCGCTGTCGCCGCCGCACCAGGGGATCGACGGCGAGTGGAGCGACAAGAGCGGGGTCATCGTCTACCGGTGGA
ACGACCGTGGCGACAGCCCCAACACCGGCCGTGCCAACTGGAAGGGGAGGTGGAGCTGCTGCCAGGAGCGGGACGAGGAA
GCGCCGCCGTGCCGCCGTGGGCACCACGTCTCGTACGACGACGGCTTCACTCTCTTCTAG--------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr5D_1_TraesCS5D01G270800
TTTTTTTAGAAACACATGCATCTTTATTCATACTCATAACAATTATAGGTACACTGATTTGGACTAAAAACACGTACAGT
AGAACTATAAAATAATGAAATCCGGAGAGAACACCTTTTTTT-AGAAACACATGCATCTTTATTCATACTCATAACAATT
AT-------AGGTACACTGATTTGACC--AAAAACCAAG-AAAATACAAAGTAACTCCTATGACTAAGAATTACAATGAA
ATCTATTGAAAACA---TCTTCACGGCGTCAATCTTTGCTCGAA-GAAATATTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGAATTAGAGCAACGATGTTGTCACAC--------------TTGCACCCACATGAACAT----TACCAATAATGGTTTT
TGAAAGCGCCTTGAGTCGTCC--------GGATGGGAAGCCTTGATCGATGAAGG----TACTTCGGTCGGGGATGATCC
-CCTAGAAGTGCAGGCAGTCGAATCGCTATATCTCAACCATGGTG--TTGATGAAAGATTTCACCTCCACAAAGAATCAG
ACCAGCAGAAACG--GCTTGCGACAGCAACATAAACTCATCAGATCTGAATAATCGGATCTGCGAGGACAG-AAGACTAT
CTAACCTCATGACACTGTCAAAAGAACGATTGGGAATTTATTCTCACAAAACTATGATGATTACTAAACGATGGCGAAAA
ACATAGAAATCTTGAAGATCTGAGGTCCCCCC-ACCTCTCAGCGTCAAGATGGCAGTCAAAAGCGAGGGGACCTAAATTT
CTCAGACGGCGGCAGCGGC------CGCACGAGAAACCCTACAGATGGGTTCCTTCACACACCCCAGAGAGAGCACCTAA
AATGCGACGTGTGGCAGTCTAGGAGCACCACTTAACACGCTCACAGGCCCAAGAAGTGATCGTGGTGAGGGCCTGTCATC
TATCTGTATTACGTATGGGCTCTTACACGCTAGAAAGCCCATTAGCCCAGAGCACGTGCTAACATACC------------
--------------------------------------------------------------------------------
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----------------------------------------------------GCACATCCTCTCAGTCTCAGCTGTGAGG
CCATGGCGAGTACCTTTCCCACCCCGACCCTCTTGACGCCCAAGCTGTCCCAGCCACCGCTCGGTCCTTCGCGCCGCAAC
GCTGCCGCTGCGGCTGCCCCGTGGCCGCATCGTGGGCGGATCAGCGCGACCACAGGAGGCGAAGCTGCCGCAGCAGCA--
-------------G------------------AAGCAAAGGCCAGGAAGGAGCAGAGGAAACGATGCCTGAGGTGCGGCG
CCCTGTACCTGGACGAGGACAACTCCGCTGCCGCCTGCGCCTTCCATGGCCACATCACCGGTAGGTACCGTATCAGCACC
ACTTACTGCTGCACTACACTACAGCACACTAGTTGCAAAATATCTTCAGGTTGCGGTTGAGCTTGCGACTCTGTGCGCGC
TGTGTGCCACGAACGTCCTGGGC------------------------------------CATACGACTGCCGCGGCCTAT
GCAAAACTACAGGGCCGAGGAGCTACCCGAGGCCCGTTTGAGAGTGGACACATGCGTGTTTGTGTTACAGGTGAGAAGGG
GCTGTTTTCGCTGTCGCCGCCGCACCAGGGGATCGACGGCGAGTGGAGCGACAAGAGCGGGGTCATCGTCTACCGGTGGA
ACGACCGTGGCGACAGCCCCAACACCGGCCGTGCCAACTGGAAGGGGAGGTGGAGCTGCTGCCAGGAGCGGGACGAGGAA
GCGCCGCCGTGCCGCCGTGGGCACCACGTCTCGTACGACGACGGCTTCACTCTCTTCTAGCCACAGGTCTACACCGGTTG
TATGAATATA--GAAGTTGTTGTTTTTT-GTAACCCGATACTGCTTTATGAAATGCAACAGTGTCC-------ATTTATA
AAGGAAGAGTACAATAGAGTTAAGAACAGGAAG-------------------------------------ATGTACAACA
AACATCATGGACTAAAGATCTCGGTTGAAAAATCAAGGGGGGTCGAACCTCTCCTCGGACTTGGCTTCTTTCCATGGGAC
TAGTTCGTGCCATCAGACTTCCTTTCTTGAAGATCACTGCGTTTCTCTCTTTTAAGGTCATCCATGAGGTCACCATGAGA
ACTCAACTCCATTTCTCTGCCTCATCATTGACTATGGATTAAACGGGAAAAGAATAGGGTAGCAGATCGACTGGCGTCGT
ATTGTCGCATTGAGAGTAGCAGTGCAGTATGGCTTCAACTAGGACCACCATGTATTGAGGTGCTTCGATTATAACACTAT
CACTATGGAATACATTACTTTCACCCCGCAAAAAAAAATTCCGCAAAAACACTATGGATTATTCACAAATGACTTAGCAA
ATACTCACTTCATTCCTAAATATAAGTCTTTCTATTTAGGAACAAAGGGAGTGGTACTTATCGAGCCACGAATAGTCAAA
TATGCAGCAGTTCGGCAGGCACACCCTGCTGGCGCTTCACCGCTTTAGATTCAATTGCAACTCGCAAACCACAAGCTTGA
GAACACGCCAAATGGTTATGAAAACAACATGTGCATAGGCACAAACTAGACCCTGGTTTTATTCCAAAAGTACATAGCAA
AGCTTTGATTGATTGCTCCAAAATATTTAATATGACCAAAATATCAATTTGCTATTAATTTTAATATTATAGGACAAGAA
AGCTTGCTGGGTAGCAGATCTCCTCGCGTCGCCCTTTGTACCCCCTCGCGTTGCCTCCCCTGGGCGACGCCAGGGGTCCC
GAACCCTAAGCGCCGCCGGCCTCCAGATCAAAGCTTCTCTGCCGTCGGCGAGGACCGCGGCGGTTGG
>chr6A_115
--------------------------------------------------------------------------------
----------------------------------CTTTTTCT-AGAAACACCTGAAACTTTATTCATACTCATAACAATT
ACCAATTACAGGTACACTAATTTTGACCTAAGATCCA--AAAAATACAAAGTAACTCCTATGACTAAGAATTACAATGAA
ATCTCTTAAAAACATCTTCTTCACGGTATCAATCTCTGCTCAAA-AAAATACTCCAAAGACTTCGATAAAGAGGCTGCAA
TTGGACTGGAGCAACGTTGTTGTCACTC--------------TTTCACCCGCATGAATAT----TGCCAAGAATGATTTT
TAAAAGCGTCTTGAGTCGCTCATCCAAAAAGATGGGAAGCCTTGATCGATGTATG----TACTTGGACCGGGGATGATCC
-CCTAGAAGTGCAGTCCGTCGAATCGTTATATCTTCACCATGGTG--TTGATAAAAGATTTCACCTCCACAAAGAATCAG
ACCAACAAAAAAA--GCTTGACACGACAACATAAACTCATCAGATCCGAATAATCAGATATGCGAAGACAG-AAAACTCT
CGAACCTCATGGCACCGCCAAAGAAACGAGAGAAAGTTTATTCTCACAAAACTATGATGATCATTACACGTTGACGACAA
GCATAGAGGTTTTGAAGATCCGAGGTCCCCTC-ACCTCTCAGCGCCAAGATGGCAGCCGAAGGCGAGGGGACCTAAATTT
CTCACTTGGCGGCGGCGGC------GGCACGAGAA---------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr5D_116
--------------------------------------------------------------------------------
-----------------------------------TTTTCTT-AGAAACACCTGTAACTTTATTCATACTCATAACAATT
AC-------AGGTACACTGATTTGGACCTAAAATGCAAG-AAAATACAAAGTAACTCATATGACTAAGAATTACAATGAA
ATCTCTTGAAAACACCTTCTTCATGGCGTCAATCTCTGCTCGAA-GAAAAACTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTTAACTGGAGCAACGATGTTGTCACTC--------------TACCAGCCGCACAAACAT----TACCAATAATGGTTTT
TGAAAGTGCCTTGAGTCACCCATCCAAAGAGATGGGAAGCCTTGATCGATGAATGAACGTACTTGGGCCAGGGATGATCC
-CCTAAAAGTGCAGGTCATCGAATCACTATATCTTCACCATGTTG--TCGATGAAAGATTTCACCTCCACAAAGAATCAG
ACCAAGAAAAAAG--GCTTGACATAGTAACATAAACTCATCAGATCCGAATAATCGAATCTGAGAGGACAT-AAAACTCT
CTAACCTCATGGCAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr5B_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTT-AGGAACACCTGTAACTTTATTCATACTCATAATAATT
AC-------AGGTACACCAA----GACCTGACATC---G-AAAATACAAAGTAACTTATATGACTAAGAATTACAATGAA
ATCTCTTGGTAACATCTTCTTCATGGCATCAATCTCTGCTCGAA-GAAATACTCCAAAGACTTCTGTAAAGAGGTTGCAA
TTGGACTGGAGCAACGATGCCGTCACTCCTTCACCTGCACTCCTTCACCCACACGAACAT----TACCAATAATGGCTTT
TGAAAGCGTCTTGAGTCGCCCATCCAAAAGGACGGGAAACCTTGATTGATGAATG----TACTTGGGCCATGGATGATCC
-CCTAGAAGTGCAGGCTGTCGAATCACTATATCTTCACCATTGTG--TCGATGAAAAAATTCACCTCCACG-AGAATCAG
TCCAACAAAAAAG--GTTTGACACAACAACATAAATTCATCAGATTTGAATAATCGGATCTGCAAGGACAG-ACAACTCT
CTAATCTCATGGCACCGTCAAAAGAGCATGAGGAAATTTATTCTCACAAAACTATAATGATCAGTAGACGATGACGAAGG
ACATAGAGGTCTTGAAGATTCGAGGTCCCCCC-ACCTCTCAGCGTCAAGATGGCAGCCGGAGGCGAGGGGACCTAAATTT
CTCAGACGGCGGC---GGG------GGCACGAGAAACCCTAACAATG---------------------------------
--------------------------------------------------------------------------------
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>chr3A_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTT-AGAAACACCTATAACTTTATTCACACTCATAACAATT
AC-------AAGTACACCAATTTGGACCTAAAATTCAAG-AAAATACAAAGTAACTCCTATGACTAAGAATTACAATGAA
ATATCTTGAAAACACCTTCTTCACGGCGTCAATCTCTGCTCGAA-GAAATATTCCAAGGACTCCGGTAAAGAGGCTGTAA
TTTGACTTGAGCATCGATGTTGT--------------CACTCTTCCACCCGCACGAACAT----TACCAATAATGGTTTT
TGAAAGCGCCTTGAGTCGCCCATCCAAACAGATGGGAAGCCTTGATCGATGAAAG----TACTTGGGCCGGGGATGATCC
-CCTAGAAGTGCAGGCCGACGAATCACTATATCTTCACCATGTTG--TCGATGAAATATTTCACCCCCACAAAGAATCAA
ACCAACAAAAAAG--GCTTGACACAACAACATAAACTCATCATATCTGAATAATCGGATATGAGAGGACAG-AAAACTCT
CTAACCTCATGGCACCGCCAAAAGAACGTGAGGAAATTTATTCTCACAAAACTATGATGATCACTAGACGATGGCGAAGA
ACATAGAGGTCTTGAAGATTCGAGGTCCCCCC-ACCTCTCAGCCCCAAGATGGCAGCCGAAGGCGAGGGGACCTAAATTT
CTTAGATGACGACGGCAGT------GGCGCAATAAACCCTAC--------------------------------------
--------------------------------------------------------------------------------
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>chrUn_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTTGAGAAACAGTTGTAACTTTATTCATACTCATCACAATT
AT-------AGGTACACTGATTTAGACCTGAGATCCAAG-AAAATACAAATTAACTCCTATGACTAAGAATTACAATGAA
ATCTCTTGAAAACACTTTCTTCACGGTGTCAATCTCTGCTCAAA-GAAATATTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGGACTGGAGCAACAATGTTGT--------------CACTCTTTCACCTGCACGAACAT----TACCAATAATGGTTTT
TGAAAACGCCTTGAGTCGCCCATCCAAAAAGATGAGAAGCCTTGATCGATGAACG----TACTTGGGCCGGG-ATGATCC
-GCTAGTAGTGTAGGCCGTCGAATCACTATATCTTCACCATGGCG--TTGATGAAAGATTTCACCTCCATAAAGAATCAG
ATTAAC-AAAAAA--GCTTGACGCAGCAACATAAACTCATCAGATCTGAATAATCGGATCTGTGAGGACAG-AAAACTCT
CTAACCTCATAGCACCGCCAAAAAAATGGAAGGAAATTTATTCTCACAAAATTGTGATGATCACTAGACGATGGCGAAGA
ACATAGAGCTCTTAAAGATACGAGGTCCCCCC-ACCTCTAAGCGCCAAGATGACAGCCGAAGGCGAGGGGACCTAAATTT
CTAAGATAACGGC---GAC------AACACGAGAAACCCTACATATG---------------------------------
--------------------------------------------------------------------------------
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>chrUn_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTTGAGAAACAGTTGTAACTTTATTCATACTCATCACAATT
AT-------AGGTACACTGATTTAGACCTGAGATCCAAG-AAAATACAAATTAACTCCTATGACTAAGAATTACAATGAA
ATCTCTTGAAAACACTTTCTTCACGGTGTCAATCTCTGCTCAAA-GAAATATTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGGACTGGAGCAACAATGTTGT--------------CACTCTTTCACCTGCACGAACAT----TACCAATAATGGTTTT
TGAAAACGCCTTGAGTCGCCCATCCAAAAAGATGAGAAGCCTTGATCGATGAACG----TACTTGGGCCGGG-ATGATCC
-GCTAGTAGTGTAGGCCGTCGAATCACTATATCTTCACCATGGCG--TTGATGAAAGATTTCACCTCCATAAAGAATCAG
ATTAAC-AAAAAA--GCTTGACGCAGCAACATAAACTCATCAGATCTGAATAATCGGATCCGTGAGGACAG-AAAACTCT
CTAACCTCATAGCACCGCCAAAAAAATGGAAGGAAATTTATTCTCACAAAATTGTGATGATCACTAGACGATGGCGAAGA
ACATAGAGCTCTTAAAGATACGAGGTCCCCCC-ACCTCTAAGCGCCAAGATGACAGCCGAAGGCGAGGGGACCTAAATTT
CTAAGATAACGGC---GAC------AACACGAGAAACCCTACATATG---------------------------------
--------------------------------------------------------------------------------
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>chrUn_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTTGAGAAACACCTGTAACTTTAATCATACTCGTAACAATT
AC-------AAGTACACTGATTTGGACCTAAAATTCAAG-AAAATACAAAGTAATTCTTATGAATAAGAATTACAATGAA
ATCTCTTGAAAACACCTTCTTCACGGCGTCAATCTCTGCTCGAA-GAAATATTCCAAAGACTTCGATAAAGAGGCTGCAA
TTTGACTGGAGGAACGATGTTGT--------------CACTCTTTCACCCGCATGAACAT----TATCAATAATGGTTTT
TGAAAGCGTCTTGAGTCGTCCATCCAAAGATATTGGAAGGCTTGATCGATGA-AG----TACTTGGGCCGGGGATGATCC
-CCTAGAAGCGCAGGCCGTCGAATCACTATATCTTCACCATGTTG--CCGATGAAAGATTTTACCTCCACAAAGAATCAG
ACCAACAGAAAAG--ACTTGACACAACAACATAAACTCATCAGATCTGAATAATCG-ATCTGAGAGGACAA-AAAACTAT
CTAACCTCATGGCACTGCCAAAAGAACGAGAGGACGTTTATTCTCACA--------------------------------
--------------------------------------------------------------------------------
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>chr2B_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTTAAAAAACACCTGTAACTTTACTCACACTCACAACAATT
AC-------ATGTACACCGATTTGGACTTAAAATCCAAG-AAAATACAAAGTAACTCCTATAACTAAGAATTACAATGAA
ATCTCTTGAAAACACCTTCTTCACGGCGTCAGTCTCTGCTCGAA-GAAAAACTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTTGACTGGAGCAACGATGGTGT--------------CACTCTTCCACCCGCACGAACAT----TACAAATAATGATTTT
TGAAAGCGCCTTGAGTCGCCCATCCAAAGAGATGGAAAGCCTTGATCGATGAACG----TACTTGGGCCGGGGATGATCC
CCCTAGAAGTGCACGCCGTCAAATCACTATATCTTCACCATGTTG--TCGATGAAAGATTTCACCTCCACAAAGAATCAG
ACCAGCAAAAAAG--GCTTGGCACAGCAACATAAACTCATCAGATCTAGATAATCGGATCTGAGAGGACAG-AAAACTCT
CTAATCTCATGGCACCACCAAAAGAATGAAAGGAAATTTATTCTCACAGAACTATGATGATCACTAGACGATGGCAAAGA
ACATAGAGGTCTTGAAGATCCGAGGTCCCCCT-AGCTTTCAGTGCCAAGATGGCAGCCGGAGGCGAGGGAACCTAAATTT
CTCAGATGACGACGGTGGC------GCCGCAAGAAACCCTA---------------------------------------
--------------------------------------------------------------------------------
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>chr7D_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTTGAGAAACAGTTGTAACTATATTCATACTCATCACAATT
AT-------AGGTACACTGATTTAGACCTGAGATCCAAG-AAAATACAAATTAACTTCTATGACTAAGAATTACAATGAA
ATCTCTTGAAAACACTTTCTTCACGGTGTCAATCTCTGCTCAAA-GAAATATTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGGACTGGAGCAACAATGTTGT--------------CACTCTTTCACCTGCACGAACAT----TACCAATAATGGTTTT
TGAAAACGCCTTGAGTCGCCCATCCAAAAAGATGAGAAGCCTTGATCGATGAACG----TACTTGGGCCGGG-ATGATCC
-GCTGGTAGTGTAGGCCGTCGAATCACTATATCTTCACCATGGCGTTTTGATGAAAGATTTCACCTCCATAAAGAATCAG
ATTAAC-AAAAAA--GCTTGACGCAGCAACATAAACTCATCAGATCTGAATAATCGGATCTGTGAGGACAG-AAAACTCT
CTAACCTCATAGCACCGCCAAAAAAAGG-GAGAAAATTTATTCTCACAAAATTGTGATGATCACTAGACGATGGCGAAGA
ACATAGAGCTCTTAAAGATACGAGGTCCCCCT-ACCTCTAAGCGCCAAGATGACAGCCGAAGGCGAGGGGACCTAAATTT
CTAAGATAACGGC---GAC------AACACGAGAAACCCTACATATG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr7D_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTT-AAGAA-ACCCGTAACTTTATTCATACTCATAACAATT
AC-------AGGTACACTGATTTGGACCTAAGATCCAAT-AAAATACAAAGTAACTGCTATGACTAAGAATTACAATAAA
ATCTCTTGAAAACAATTTCTTCACGGCGTCAATCTCTGCTCGAAAAAAATACATCAAAGACTTTAGTAAACAGGCTACAA
TTGAACTGGAGCAATGATGTTAT--------------CACTCTTTCACCCGCACGAACATTTCGTACCAATAATGGTTTT
TGAAAGCGCCTTGAGTCGCCCATCCCAAGAGATGGGAAGTCTTGATCGATGAACG----TACTTGGGCTA-GAATAATTC
-CCTGGAAGTGCAGGCC-TCGAATCACTATATCTTCACCATGTTG--TCTATGAAAAATTTCACCTCCACAAAAAATCAC
ACCAACAAAAAAG--GCTTGACACAGCAACATAAACTCATCAGATCTGAATAATCGAATCTGCGAGGACATCAAAACTCA
CTAACCTCATGGCACCGCCAAAAGAACGAAAG-GAAATTATTCTCACAAAACTATGATGATCACTAGACGATGACGAAGA
ACATAGAAGTCTTGAAGATCCGAGGTCTCCCC-ACCTCTCAGCTCCAAGATGCCAGTCGGAGGCATGGGGACCTAAATTT
TTCAGATGGCGACGGCGGCAGCAGCCGCACGAGAAACCCTACAGATG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr6B_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTT-AGAAACACCTGTAACTTTATTTATACTTGTAACAATT
AC-------AGGTACATTGATTTGGATCTAAAATTTAAGAAAAATACAAAGTAACTCTTATGACTAAGAATTACAATGAA
ATCTTTTGAAAACACCTTCTTCACGGCGTCAATCTCTGCTCGAA-GAAATATACCAAAGACTTCGGTAAAGAGGCTGCAA
TTTGACTGGAGCAACGATGTTGT--------------CACTCTTTCACCCGCACAAACAT----TACCAATAATGGTTTT
TGAAAACGCCTTGAGTCGCCCATCCAAAGAGATAGAAAGCCTTGATCGATGAACG----TACTTGGGCCGGGGATTAT-C
CCCTAGAATTGCAGGTCGTCGAATCACTATATCTTCACCATGTTG--TCGATGAAAGATTTCACCTCCACAAAAAATCAG
ACCAACAAAAAAAAAGCTTGATATAGCAACATAAACTCATCAGACTTGAATAATCGGATATGAGAGGACAG-AAAATTCT
CTAACCTCATGGCACTTCCAAAAAAATGAGAGGAAATTTATTCTCACAAAACTATGACGATCACTAGACGATGATGACGA
ACATAGAGGTCTTGAAGATGTGAGGTCACCC--ACCTCTCAGTGGCAA-ATGGCAGCCGGAGGTGAGGGGACCTAAATTT
CTTAGACGACAACGGTGGC------GGCGCAAGATACCCTA---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr3D_116
--------------------------------------------------------------------------------
-----------------------------------TTTTTTT-AGAAACACCTGTAAATTTATTCATACTCATAACAATT
AC-------AGGTACATTGATTTGGACCTAAGATCCAAG-AAAATACAAAGTAACTCCTATGACTAAGAATTACAATGAA
ATCTCTTGAAATCACCTTCTTCGCGGTATCAATCTCTACTCGAA-GAAATACTCCAAAGACTT-GGTAAAGAAGCTGCAA
TTGGACTGGAGCAACAGT----------------------------ACCCACACAAACAT----TACCAGTAATGGTTTT
TGAAAGCACGTTGAGTCGCCCATCCAAAAAGATGGGAAGCCTTGATCGATGAACG----TAGTTGGGCTGGGGATGATCC
-CCTAGAAGTGGAGACCATCGAATCACTATATCTTCACCATGGTG--TCGATGCAAGATTTCACCTCCACAAAGTATCAG
ACCAACAAAAAAA--GCTTGACACAGCAACATAAACTCATCAAATTCGAATAATCGGATCTGCGAGGACAG-AAAACTCT
CAAACCTCATGGCACCGCCAAAAGGACGAGAGGAAATTTATTCTCTCAAAACTATGATGATCACTAGACGTTGACGAAGA
ACATAAAGATCTTGAAGATCCGAGGTCCCCC--ACCTCTCAGCGTCAAGATGGCAGCTGGAGGCGAGGGGACCTAAATTT
CTGAGATGGCGTCGACGACGGCG---ACACGAGAAAACCCT---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr3B_117
--------------------------------------------------------------------------------
------------------------------------TTTTTT-AGAAACACATTTAACTTTATTCATACTCATAATAATT
AT-------AGGTACACTGATTTGGACCTAAGATCCAAA-AAAATACAAAGTAACTTCTATGATGAAGAATTACAATGAA
ATCCCTTAAAAACACCTTCTTCGTGATATCAATCTCTGCTCGAA-GAAATACTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGGATTGGAGCAACGATGTTGT--------------CACTCTTTCACCTACACGAACAT----TACCAATGATGGTTTT
TAAAAGCGCCTTGAGTCGTCCATCCAAAAAGATGGGAAGTCTTGGTCGATAAACG----TACTTGGGCTGGGGATGATCC
-CCTAGAAGTGCAGACCGTCGAATTACTATATCTTCACCATGGTG--TCGATGGAAGATTCCACATCCACAAAGAATCAG
ACCAACAAAAAAAA-ACTTGACACGGCAACATAAACTCATTAAATCCGAATAATCGGTACTACGAGGATAG-AAAACTCT
CTAACCTCACGGCACTGCTAAAAGAACGAGAGAAAAATTATTCTCAC-AAACTATGATGATCACTAGACGTTGATGAAGA
ACATA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr6D_122
--------------------------------------------------------------------------------
-----------------------------------------T-AGAAACACGTGTAACTTTATTCATACTCAAAACAATT
AC-------AAGTACACTGATTTGGACCTAACATTCAAG-AAAATACAAAGTAACTCCTA--ACTAAGGATTATAATGAA
ATCTCTTAAAAAGACCTTCTTCACGGCGCCAATCTCTGCTCGAA-GAAATACTCCAAAGACTTCGGTAAAGAGGCTGCAA
TTGGACTGGAACAACGAGGTTGT--------------CACTCCTTCACCCACACGGACAC----TACCAATAATGGTTTT
TGAAAGCGCCTTGAGTCGCCCATCCAAAAAGATGGGAAGCCTTGATCGATGAACC----TACTTGGGACAGGGATGATCC
-CCTAGAAATGCAGGTCGTCGAATCACTGTATCTTCACCATGATG--TCGATGAAAGATTTCACCTCCACAAAGAACTAG
ACCAACAAAAAAG--GCTTGACACAGCAACATAAACTCATCAGATCTGAATAATTGGATCTGCGAGGACAG-AAAACTCT
TTAATCTCATGGCACCGTCAAAAGAACGAGATGAAATTTATTCTCACAAAACTATAATAATCACTAGACAATGGCGAAGG
ACATAAATATCTTGAAGATCCGAGGTCTCCCCCACCTCTCAGGGCTAAGATGGCAGCTGGAGGCGAGGGAACCTAAATTT
CTCCGATGACGACGGCGGC------GGCACGAGAAACACTAACAATG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr5B_891
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GGGCCAGTCGTG
TAGCTGTATTACGTATGGGCTCTTACACGCTAGAAATCCCATTAGCCCAGAGCACGTCCTAACATATCATTCACGTTGCA
AGTGAGAGACGTGACGACCCAAACCCTGAGAAATAGAAAAACGAGCTAATCTATGTGCTTCATAATTAACAGCACGACCC
TTGAAAATAAACTTCAAGTTATGCAACTCTGCTTTCGCCCTAATCTCCGCAATGATAGCTCCATGCGCCCCTAGGGTTCC
ATTTGTGATATCGGACACCACCTGCTTGCAGTCGCTTGAGATCACGCAATGTGTCAGGTTCATGTCCTCTGCCAACGCTA
GCGCTTCTCTGCATGCCGTTGCCTCCAATATCGTAGGATTGCTCACACCGTAAACAACCAGCGCCGAACTCCCCAGGTAG
TTTCCTCCTTCATCCCTGCAAACAGCTACAGCTGCTCCACCTCGCTCATGCCTAACAGCAGCATCCACATGGATCTTAGC
ATACCCCGATGGCGGAGCCTTGGCTCTTGGGCGGGCTGAAGTAACCGATACAGGAACCCGGGCCGGTGTTGGTTTCTGTT
GGGCTGAAGTTATCTGCAAATCATCGATGAACCTTCGAATGAATGCTTGGGTAGATTGTGGACTCTGAAAGATCCCTTCG
TGTATTGCTTTCCTCCTAGCTGACCAGATCGCCCATAGGGTGACGGAGAGCAGCACAAACTTGTCGTGCTCTAACATCTC
CATTAATGAAAACAACCAGTGTTTTGCATTAGGCTCTGTTACCGTCGTCATTTTATGCACCAATTCATTATCGATCAATG
CCCAAACGCATCGGGATGCAGCACATTCCAGCGGCGAGTGCCTCCACGAGTCTGGTGCTCCACATAATCCGCAGCTAGCC
GAATCAGCCATGTGTCTATGAGCTCGTACGTCGTTCGTGGGCAGGGAGTGTTTTGACAGTCGCCACAAAAACATTCGCAC
CTTAGCCGGGACGGGCGTTTTCCATAAAGTTTTCCACGAGCCTTCCTCAGCGTTTGAGTTTGAGGAGCCAGGGTTTCCAT
CAAGCCACGCTTCTCTTCTTTGCTTTGTAGCCACAATCATACGATAAGCGGACTTCACCGAAAAAACTCCATGCTTCTCA
TAGTGCCAGCTCCAGAAATCAGGCAAGTTACGTGTACACAGCGGGATGCTCAGGATAATTCGACTGTCCATCGGCAGAAA
GGTCGCTTCTACCCTCGCACGATCCCAAGACGCGGATGTATGATCTATTAGCTCAGAAACTCTAGCCGGTGGATGTGTTG
CTAAACACCCATATGGTCGCAGCATCTCCTCTCTCGGGATCCAATTGTCCCTCCATATATATGTTGTCTCTTCATTCCCG
ATCCTTCTAATCAATCCTTGTTTCAATGTATCTCTGCCTTCGATCACAGCCCTCCACACTTGACTAGGATGGCCTCCCAA
TTGAGCTTCTAATATATCAGATTGCGGGTGATAGATACTTCTGAGGATTCTGGCGCAAAGAGTATTGGGGTGCTGAAGTA
ACCTCCAGGCTTGCCTAGCTAACATAGCTAGATTAAACAGTTCAAAGTCCTTGAATCCCAAGCCCCCCATTCCTTTAGGT
TGGGTCATTATTTGCCAAGAAACCCAATGCGGTTTTCGTTTGCCTTCCTTACTGCCCCACCAAAACTTTCTTATCAACTT
GTTCAAATGTTCACACAGGCCCCTTGGGAGTTTAAAGCATGACATCGAGAAGACATGCACTGCTTGGGCTACAGCCTTAA
CTAACACCTCCTTACCTGCCGATGACATCGTGTTTGCAATCCACCCTTGAACTTTGCTCCACAAACTGTCCTTTAGATAT
TTAAAAGCACCGTTTTTTGAATTTCCAATATCAGATGGCATACCAAGATATTTCTCATTGAGAGTTTCATTGGGAACATT
TAGTAAATCCTTAATCTCCAACCTTGCATTTTCAGGAACTCCTTTACTGAAGAAGATTGAGAATTTAGAGTAGTTAATTC
TTTAAATATTAGTCTCAGTCGTGTCTGGTATGGCACCTCTCATGACCCTCGTTGTATCCCACATCATGTGGTTTTCGGTG
ATGAATAAATGAATTTTCACCCCTCAAAAAAAAATGTTGCAAGTGACAGACTGCGCATCCTCTCAGTCTCAGTCGTCAGG
CCATGGCGAGTTCCTTTCCCACCCCGACCCTCTTGACGCCCAAGCTGTCCCTGCCACCGCTCGGTCCTTCGCGCCGCAAC
GCTGCCGCTGCGGCTGCCCCGTGGCCGCATCGTGGGCGGATCACCGCGACTACAGGAGGCGATGCTGCCGCAGCAGTAGC
GACGACAGAGGAGG------------------AAGCAAAGGCCAGGAAGGAGAGGAGGAAACGATGCCTGAGGTGCGGCG
TCCTGTACCTGGACGAGGAGAACTCCCCTGCTGCCTGTGCCTTCCATGGCCACATCACCGGTAGGTATCGTATCAGCACC
ACCGACTGCCGCACTACACTACAGTACACTAGTTGCAAAATATCTTCAGGTTGCGGTTGGGCTTGCGACTCTGTGCGCGC
TGTGTGCCACGAACGTCAGCTGGGGGCCATAGATCCTTGATCCTTCCTTCAGGCCGAAGCATATGACTGCCGCGGCCTAT
GCAAAACAATAGGCCCGAGGAGCTTCCCGAGGCCCGTTTGAGAGTGCACACATGCGTGTTTGTGTTGCAGGTGAGAAGGG
GCTGTTTTCGCTGTCGCCGCCGCACCAGGGGGTCGACGGCGAGTGGAACGACAAGAGCGGGGTCATTGTCTACAGGTGGA
ACGAGCATGGCGACCGCCCCAACACCGGCCGTGCCAACTGGAAGGGAAGGTGGAGCTGCTGCCAGGAGCGGGACGAGGAA
GCGCCGCCGTGCCGCCGTGGGTACCACGTCTCCTACGACGATGGCTTCACTCTCTTCTAGCCACACGTCTACACCGGTTG
TATGAATATATGGAAGTTGTTGTTTTTT-GGAACATGATACTGCTTTATGAAATGCAACAGTGTCCTATGTCCATTTATA
AAGGAGGAGTACAATAGAGTTAAGAACAAGAAGAGA--------------------------AAAAAATTATGTACAACA
AACATCATGGTCTAAAGATCTCGGTTGAAAAATCAGGGTGGGTCGAACCTCTCCTCGGACTTGGCTTCTTTCCATGGGAC
TAGTTCGTGCCATCAGACTTCCTTTCTTCACTCT------GTTTCTCTCTTTTAAGGTCATCCATGAGGTTAGCATGAGA
ACTGAACTCCACTTTGCTTCCTCATCATTGACTATGGATTA---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr5B_921
--------------------------------------------------------------------------------
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------------------GCTCTTACACGCTAGAAAGCCCATTAGCCCAGAGCACGTCCTAACATACCATTCACGTTGCA
AGTGA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------CAGACTGCACATCCTCTCAGTCTCAGTCGTCAGG
CCATGGCGAGTTCCTTTCCCACCCCGACCCTCTTGACGCCCAAGCTGTCCCTGGCACCGCTTGGCCCTTCGCGCCGCAAC
GCTGCCAATGCGGCTGCCCCGTGGCCGCATCGCGGGCGGATCAGCGCGACCACAGGAGGCGACGCTGCCGCAGCAGCA--
-------------GCAGCGACGACAGAGGAGGAAGCAAAGGTCAGGGACAAGCAGAGGAAACGATGCCTGAGGTGCAGCG
CCCTGTACCTGGACGAGGAGAACTCTCCTGCTGCCTGCGCCTTCCATGGCCACATCACCGGTAGGTATCGTATCAGCACC
ACTAACTGCCGCACTACGCTACAGTACACTTGTTGCAAAATATCTTCAGGCTGCGGTTGGGCTTGCGACTCTGTGCGTGC
TGATTT-------CGTCAGCTGGGGGCCATAGATCCTTTAGAG---------GCCCATGCATACGACTGCCGCGGCCTAT
GCAAAACTACAGGCCCGAGGACCTTCCCGAGGCCCGTTTGAGAGTGGACACATGCGTGTTTGTGTTGCAGGTGAGAAGGG
GCTGTTTTCGCCGTCGCCGCCGCACCAAGGGATCGACGGCGAGTGGAGCGACAAGAGCGGTGTTA-TGTCTACAGGTGGA
ACGACTGTGGCGACCGCCCCAACACAGGCCGTGCCAACTGGAAGGGAAGGTGGAGCTGCTGCCAGGAGCGCGACGAGGAA
GCGCCGCCGTGTCGCCGTGGGTACCACGTCTCCTACGACGATGGCTTCACTCTCTTCTAGCCACACGTCTACACCGGTTG
TATAAATATA--GAAGTTGTTGTTTTTTTGTAACACGATACTGCTTTATGAAATGCAACAGTGTCT-------ATTTATA
AAGGAAGAGTACAATAGAGTCAAGAACAAGAATATCCGCAAAAAGAAAAAAGGCAAGAAGAGAAAAAATTATGTACAACA
GACATCATGGTCTAAAGATCTCGGTTGAAAAATCAAGGTGGGTCGAACCACTCCTCGGACTTGGCTTCTTTCGATGGGAC
TAGTTGGTGCCATCAGACTTCCTTTCTTCACTCT------GTTTCTCTCTTTTAAGGTCATCCATGAGGTTAGCATGAGA
ACTGAACTCCACTTTTCTGCCTCATCATTGACTATGGATTA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr5A_964
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------ACAAACT------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------GCACATCCTCTCAGTCTCAGGCGTGAGG
CCATGGCGAGTACCTTTCCCACCCCGACCCTCTCGACGCCCAAGCTGTCCCTGCCACCGCTCGGTCCTTCGCGCCGCAAC
GCTGCCGCTGCCGCTGCCCCGTGGCGGCACTGCGGGCGGATCTGCGCGACCACCGGAGGCGATGCTCCCGCAGCAGGAGC
GACGACAGAGGAGG------------------AAGCAAAGGCTAGGAAGGAGCAGAGGAAACGATGCCTGAGGTGCGGCA
TCCTGTACCTGGACGAGGAGAACTCCGCTGCTGCCTGCGCCTTCCATGGCCACATCACCGGTAGGTATCGTATCAGCACC
ACTGACTGCTGCATCACACTACAGTACACTAGTTGCAAAATATCTTCAGTTTGCGGTTGGGCTTGCGACTCTGTGCGTGC
TGTGTACCACGAACGTCCTT--------------------------------GCCCATGCATACGACTGAAGCAGCCTAT
GCAAAACTATAGGCCGGAGGAGCTTCCCGAGGCCCGTTTGAGAGTGGACATATGCGTGTTTGTGTTGCAGGTGAGAAGGG
GCTGTTTTCGCTGTCGCCGCCGCACCAAGGGATCGACGGCGAGTGGAGCGACAAGAGCGGGGTCATCGTCTACCGGTGGA
ACGACCGTGGCGACCGCCCCAACACCGGCCGTGCCAACTGGAAGGGGAGGTGGAGCTACTGCCAGGAGCAGGACGAGGAA
GTGCCGCCGTGCCGCCGTGGGCACCATGTCTCCTACGACGATGGCTTCACTCTCTTCTAGCCAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S-S-----------------------
------------------------SS-------S----------------------------------------------
----S------------------------------S--------------------------------------------
-------S------------------S-----------------S-----------------------------------
-----------------------------------------------------S----------S--S------------
----------------S-----------------SS--------------------------------------------
-----------S--------SS----------------------------------------------------S-----
-----------S-----------------SS------------------------------S----S-------------
----------------------------------------------------------S--S------------------
-------------S---------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---S-S
--S------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------SS------
---------------------------------------------------S----------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------------S-----------S-----------------------------------S------------
---S--------------------S----------------------------------S--------------------
-------------------SS-S---------------------------------------------------------
-------------S----------S-----------------------------------------S-------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------S--------S-----------------------S--------------
----------------------------------S---------------------------------------------
----------------------------S---------------------------------------------------
----------S---------------------------S-----------------------------------------
----------------------------S-SSS-SSSSSS------------------------------S-S-------
---S-------S--S--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_942
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------ACAGGCCCAAGAAGTGATCG------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_4811
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------GTAGCAGATCTCCTCGCGTC--------------------------------------------------
-------------------------------------------------------------------
