>input_sequence_71092
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-------------------ACTCATTCATCTTCTTTCCATGCCACACAGACG----GATCAAGAAGAGCAGAAAAAGTA-
-----------------------CAACAAAAGACACCATAGCGATGGGAGCGGCGGTGAAGCGCGCGAGGGAGGAGGAGC
CG---GTGTCGCTGGCGCTGGCGCTCACCACGGACTCGGCGG---CGTCG---TCCACCACGTCGG------CCGACTCG
GCCGGGGCGGCGCCGG------CCAGGAAGAGGGCGCGGCGGGGCAGAGTGGTGGCCACGTCGGGGGAGGGGGAGTTCGT
CTGCAAGACCTGCAGCCGCGCCTTCGCCACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTGCGCGGCCGCCACG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGGAGCGGAAGAAGCAAGAGGAGAAGCA---GCACGAGTGCCAC
ATCTGCGGCCTCGGCTTCGAGATGGGCCAGGCGCTGGGCGGACACATGCGCCGGCACCGGGAGGAGATGGCGCTGCGC--
-GGCGG---CGACGACGGCGA-----------------------------------------------------------
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-------------------------------------------------------------------------------T
CAGTGGGTGTGGCGCGGCGTCGG---------------------------------------------------------
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----------------------------------GCTGCCGGATCAGGAGGCGGTGGCG---CACCAG---GCCGCCGCC
AATTACGA---GCCGCCCGTCTTGCTCGAGCTGTTCGTCTAGGTAGCTAGCTGGATCTGCTAGTAGTTA-TACAATTTCT
TGATGGAGGAAATCACTTGTAAATGTCTTTGATTAGGATGATATTATGAGATG-TAGGTTAATTGT--------------
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----------------------------------------------------
>chr5A_1_TraesCS5A01G477400
TTCTTGTAGGGGAATAATTTCTGGTTCAACGTCGGTCCACCTAAAAGGTTTTTAGGCGAATCACCTGATATCCACTCCAA
CCTTAATTGGCTGGAACTTAGTCCCCAAGTACATTTTTTG--GGAGATCTTTTCGCCACACACCTTTAATTGGCTGAAAC
TTTTATAACCCCCACTGCACTTTCAATTAACTGTTCACGGTT-GGCAGGCTGGGTGTACTTTGAACGGCGAAAATAGCGG
CAGCTC--CACATCCAGCGTCGAAGAAGAAGCGAGAGCAAGTCACCGT----CTAGTCGTCAAATCACCCCGCACGTCAT
GCCAGCTCGCGCACGTCTTTGTCGACTCAGCAAAGTGCTTTTCCACACACGTCTGGCCGGAAAATATCCCGGCCG-TCGA
CCTTGGCCAGAAAGAAACTCGAGAACATTCCAGAGCGTCGACTCCCAGGCCCCAGCTCGATCCA----------------
---------GCGCGCAGCCTGGACTATTCTACTACTCCCTCCGTTTCGAATTACTTGTCTTGGATTTATCTAGATACATC
TGTTCTGAATTACTTGTCTTGGATTTGTCTAGATACAGAGATATCTAACACTAAAATGAGGATGTATCTAGACAAATCCA
AGACAAGTAATTCGGAACGGAGGGAGTAGTACTGATATTTCATTCCGATTAATCAAC-AACCGCCGAATCCGCCCACGCG
GCTAAGGTAGGTCGCTCCCGTTGCCCGCGCGGCTAAGCTACCGCGCGCCGCCGGGCACGCGCCTCGCCGCGCACCACACG
CTCGAGTCGGCTGTGCTCGAGTATATCCGATCGCTGGCGTGACACCCATCCACGTCGTGAGCGGCGCGGTGGCTTGCAGC
GATTGGTTAG-CCACCCGAGGTCGGCCACCACCCCGCCGACTTGACAACCACGTTAGCT-CCCCCGCACCACTACGCAGG
CGGCACGCCATCTCCACCGCCAC------------CGCCTCGACCCGTCGCGACACA---ACCTATATATAAAAC-----
-CGCGCCGCCGCTCCATCAACTCATTCATCTTCTTTCCATGCCACACAGACG----GATCAAGAAGAGCAGAAAAAGTA-
-----------------------CAACAAAAGACACCATAGCGATGGGAGCGGCGGTGAAGCGCGCGAGGGAGGAGGAGC
CG---GTGTCGCTGGCGCTGGCGCTCACCACGGACTCGGCGG---CGTCG---TCCACCACGTCGG------CCGACTCG
GCCGGGGCGGCGCCGG------CCAGGAAGAGGGCGCGGCGGGGCAGAGTGGTGGCCACGTCGGGGGAGGGGGAGTTCGT
CTGCAAGACCTGCAGCCGCGCCTTCGCCACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTGCGCGGCCGCCACG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGGAGCGGAAGAAGCAAGAGGAGAAGCA---GCACGAGTGCCAC
ATCTGCGGCCTCGGCTTCGAGATGGGCCAGGCGCTGGGCGGACACATGCGCCGGCACCGGGAGGAGATGGCGCTGCGC--
-GGCGG---CGACGACGGCGA-----------------------------------------------------------
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-------------------------------------------------------------------------------T
CAGTGGGTGTGGCGCGGCGTCGG---------------------------------------------------------
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----------------------------------GCTGCCGGATCAGGAGGCGGTGGCG---CACCAG---GCCGCCGCC
AATTACGA---GCCGCCCGTCTTGCTCGAGCTGTTCGTCTAGGTAGCTAGCTGGATCTGCTAGTAGTTA-TACAATTTCT
TGATGGAGGAAATCACTTGTAAATGTCTTTGATTAGGATGATATTATGAGATG-TAGGTTAATTGTTGGGCATTGTAATT
ACAAATTTACGGTTCGATAGAGTACG-TTTTGCCGGTTGGCGTTTCTGTTCTTGGAATTTTGCTTTGGATTGGCACATTT
TTTAACCGATCGACTGGAGGTTTGTGGATCTCGTATGCACTTGTACATGTTGTTCCATGAATATGGTTGCTGTTCACCCC
CAGTCCACTTCAGAACCTCAATTTGTAAAATGCTGCAATGCAATCTGTTTCTAAAAAAGAAAGACAAACTCTCAGTCGTT
GCGTAAATT-GATGCAACACGGTCTGAAAGAAGATAAACCCCAAACCGTTGCATCGATTGATACAACACGAGCTACGGTT
ACCGAAATTAAGATCATAA-----AAAAGAACATTGACAGTATATACCGGATAACTACTTAG----------CTTTTTTT
GTG--------TGAAAACTATTGTCTTTTATTTTTTTAAGGGTCACTACTGCCTTACTTGGGTTGAGTTTTAGGAGCCGC
CAC-TTATATTCGCCATCATCCGTGATCTGATTCTAAACAACATGGGTTGAAAAAATGACTTGCAGCCTAACCAAAGCAG
CTGGGAGTTCAAGATTTCACAACTGGTTAACACAAACAAAAATTCATAATTTGTTCTTTGCGAATTAGAAAAATCATCAT
AATATTTAATTAACTTATTAGAGTACTTGAGCTTAGATCAAATATATACTTGAATGTAATCAATTAACATCACAACATGT
TCTCTCAGTTTAGTTTGTATCAGGTCTTCGATTTACGGTTTCTTGGCTGGATCATCTATTTGGTCTGGCTTTTAGAACTA
TGCTAAACAGGTGTCGTAAGTTCATAACATATGAGTATATTGCCAAGTGTCGACTACCAAGAAGCAAAAAAGAAACCGAA
ACTGTGGATTTTTTTTTGCGAGAAGAAACTGTGGAATTTTTGACCGAACCGCTATAACTATCTACCCCGTTTCAAAATAG
TTGAAGTCCTAGAATTTTTCCAAATCATATTTTTAAAGTTTGATCAAATATA
>chr5B_37
CCACCT-------------------------------------AAAAGTTTTTAGGTGAATCACCTTTTATCCACTCCGT
CTAACGGAGAAG----CTTAGACCCCAAGTATATATTTGTCAGGAGATCTTTTCGCCACACACTCTTAATTGGCTGAAAC
TTTCATAACTCCCACTGCACTTTCAATTAACAGTTCACGGTT-GGCAGGCCGGGC--ACTTTGAACGTCGACTATAGCGC
CAGCTGCACACATCCAGCGTAGAAGAAGAAGCGAGAGCAAGTCACCGTCGCGCGCGTCGTCAAATCACCCCGCACGTCAT
GCCAGCTCGCGCACGTCTTCGTCGACTCAGCAAAGCGCTTTTCCACACACGTCTGGCCGGAAAATATCCCGGCCGGTCGA
CCTTGGCCAGAAAGAAACTCCAGAACATTCCGGAC--------------CCCCAGCTCGATCCAGTGTGCCTCCAGTCGA
AACGCGCGCGCGCGCAGCCTGGACTATTCTACG-----------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GACATTTCATTCCCATTAACCAACGAACCGCCGAATCCGCCCACGCG
GCTAAGGTA---------CGTTGCCCGCGCGGCTAAGCCACCGCGCGCCGCCGGCCACGCGCATCGCCGCGCGCCACACG
CTCGAGTCGGCTCGCCTCGAGCATATCCGATCGATCGCGTGACATCCATCCACGTCTTGAGCGGCGCGGTGGCTTCCGAC
GATTGGTCCACCCACCCGAGGTCGGCCACCACCCCGCCGACTTGACACCCACGTTAGCTCCCCCCGCACCACTACGCAGG
CGGCACGCCACCT------CCAC------------CGCCTCGACCCGTCGCGACACACCAACCTATATATAAAACCACCA
CCGCGCCGCCGCTCCATCAACTCATCCATCTTCTTTCCATGCCACGGAGCCAGAGCTGCG---------AGACAAAGTAC
TTGCAACAAAAAAGCACCAGAGCCCACACGGATCC----GGCGATGGGAGCGGCGGTGAAGCGCGCGAGGGAGGAGGAGC
CG---GTGTCGCTGGCGCTGGCGCTCACCACGGACTCGGCGG---CGTCG---TCCACCACGTCAG------CCGACTCG
GCCGGCGCGCCGGCGGCGT---CCAGGAAGAGGGCGCGGCGGGGCAGAGTGGTGGCCACGTCGGGGGAGGGCGAGTTCGT
GTGCAAGACCTGCAGCCGGGCCTTCGCCACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCACG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGGAGCGGAAGCGTCAGGAGGAGAAGCC---GCACGAGTGCCAC
ATCTGCGGGCTGGGGTTCGAGATGGGCCAGGCGCTCGGAGGGCACATGCGCCGGCACCGGGAGGAGATGGCGCTGCGC--
-GGCGC---CGACGACGGTGA-----------------------------------------------------------
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-------------------------------------------------------------------------------C
CAGTGGGTGTGGCGCGGCGTCGG---------------------------------------------------------
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----------------------------------GGCGCTGGATCAGGAGGCGGTGGGG---CGCCAG---ACCGCCGCC
AATTACGA---GCCGCCCGTCTTGCTCGAGCTGTTCGTCTAGGTAGCTAGCTGGATCTACTAGTAGTTAGTACAATTTCT
TGATGAAGGGAATCACTTGTACATGTCTTTGATTAGGATGATATTATGAGATAATTGTA--------GGACATTGTAATT
ACAGATTCACGGTTCGATAGAGTACGTTTTTGCCGGTTGGTGTCTCTGTTCTTGGA-TTTTGCTTTGGATTGGTCCGTTT
TTTAACCGATCGACTGAAGATTTGTGGATCTCGTATGCACTTGTACATGTTGTTCCATGAATATGGCTGCTGTTCACCCC
CAGTCCACTTCA--ACTTCAATCTGTAAAATTCTGCAATGCAATCTGTTTCTAGAAAAGAAAGACAAACTCTCAGTCGTT
GCGTCAATTTGATGCAACATGATATGAAAGAAGATAAACACCAAACTGTTGCATCAATTGATATACCTAC-------GTT
ATCGAAATTATAAATAATGATCATAAAAAAACATTGACAGTTTA--ACGGATAACTATTGCC----------TTTCTTTT
TTT--------CCAAAACTATTGT----------------------------CTTACTTGGGTTGAGTTTTAGGAGCCGC
CA-TTTATATTCGCCATCATCCGTAATCTGATTCTAAACAACATGGTTTGAAAAATTGTCTTGCAACCTAACCCAAGCGG
CTGGTGGTTCAGGATTTTGCAACTGGTTAACA-----------------------------------GAAAAATAATCAT
AAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr5D_183
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------------------------AATTAACTGTTAACGGTTTGGCAGGTTGGGC--ACTTTGAACGTCGACAATAGCGC
CAGCTC--CACGTCCAGCGTAGAAGAAGAAGCGAGAGCAAGTCGCCGT----CGCGTCGTCAAGTCACCCCGCACGTCAT
GCCAGCTCGCGCACGTCTTTGTCGACTCAGCAAAGTGCTTTTCCACACACGTCTGGCCGGAAAATATCCCGGCCGGTCGA
CCTTGGACAGAAAGACACTCCAGAACATTCCACAC--------------CCCCAGCTCGATCCAGTGTGCCCCCAGTCGA
AA----CGCGCGCGCAGCCTGGACTATTCTACTACT--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------GATAATTCATTCCGATTAACCAACGAACCGCCGAATCCGCCCACGCG
GCTAAGGTATGCAT-----GTTGCCCGCGCGGCTAAGCCACCGCGCGCCGCCGGCCACGCGCCTCGCCGCGCACCACACG
CTGGAGTCGGCTCGCCTCGAGTATATCCGATCGATCGCGTGACATCCATCCACGTCGTGAGCGGCGCGGTGGCTTCCCCC
GATTGGTCCACCCACCAGAGGTCGGCCACCACCCCGCCGACTTGACAACCACGTTAGCTCCCCCCGCACCACTACGCACG
CGGCACGCCACCT------CCACCGCCACCGCCACCGCCTCGACCCGTCGCGACACACCAACCTATATATAAAAC-----
-CGCGCCGCCGCTCCATCAACTCATTCATCTTCTTTCTTCGCCACACCGACGGACCGATCAAGAAGAGCAGAAAAGGTA-
-----------------------CAACAAAGATCC----AGCGATGGGAGTGGGGATGAAGCGCGCGAGGGAGGAGGAGC
CG---GTGTCGCTGGCGCTGGCGCTCACCACGGACTCGGCCG---CGTCG---TCCACCACGTCGG------CCGACTCG
GCCGGCGCGCCGGCGGCGA---CCAGGAAGAGGGCGCGGCGGGGCAGAGTGGTGGCCACGTCGGGGGAGGGGGAGTTCGT
CTGCAAGACCTGCAGCCGGGCCTTCGCAACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCACG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGGAGCGGAAGAGGCAAGAGGAGAAGCA---GCACGAGTGCCAC
ATCTGCGGGCTGGGGTTCGAGATGGGCCAGGCGCTGGGCGGACACATGCGCCGGCACCGCGAGGAGATGGCGCTGCGC--
-GGCGGCGGCGACGACGGTGA-----------------------------------------------------------
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-------------------------------------------------------------------------------C
CAGTGGGTGTGGCGCGGCGTCGG---------------------------------------------------------
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----------------------------------GGTGCTGGATCAGGAGGCGGTGGGG---CACCAG---GCCGCCGCC
AATTACGA---GCCACCCGTCTTGCTCGAGCTGTTCGTCTAGGTAGCT----GGATCTGCTAGTAGTTA---CAATTTCT
TGATGGAGGACTTCACTTGTAAATGTCTTTGATTAGGATGATGTTATGAGATATTAGGTTAATTGTTGGGCATTGTAATT
ACGAGTTTACGGTTCGATAGAGTACG-TTTTGCCTGTTGGCGTTTCTGTTCTTGGATTTTTGCTTTGGGTTGGTCCATAT
TTTAACCGATCGACTGGAGATTTGTGGATCTCGTATGCACTTGTACATGTTGTTCCATGAATATGGTTGCTGTTCATCCC
CAGTCCACTTCAGAACCTCAACTTGTAAAATTCTGCAGTGCAATCTGTTTCTAGAAAAGAAAGACAAACTCTCAATCGTG
GCGTCAA-TTGATGCAACACGATATGGAAGAAGATAAACACTGAATAGTTGCATCGGTTGATACAACACGACC-------
---------------------------AAAACATTGGCAGTATA--CCGGATAACTATTGTCCGGTTTTTTTTTTCTTTT
TTTTTTTTTTGTGAAAACTATTGT----------------------------CTCACTTGGGTTGAGTTTTAGGAGCCGC
CATTTTATATCCGCCATCATCCGTGATCTGATTCTAAACGACATGGTTTGGAAAATTGACTTGCAACCTAACCGAAGCAG
CTGGCGGTTCAGGATTTCACAACTGGTCAACACAATAAC-----------TTTTTCTTTGTGAATTAAAAAAATCATCAT
AATGTTTAAATAATTTATTGAACTACTTGAGCTTAGATCAAATAGATACTCAAATGTAATCAATTAACATCACAAAATGT
TG--TCAGTTTAGTATGTGTCAGGTCTTCAATTTTGGGTTTCTTGGCTGGATCATCGATTTGGTCTGGTTTTTGGAACTA
TGCTGAACAGATGTCTGAAGTTCACAGAATACGAGTAGATTGCCAAGTGCCGACTACCAAGAAGCAGAAAAGAAATCTAA
ACTGTG--------------------------------------------------------------------------
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>chr5D_1077
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-------------------------------------------ATGGGAGCGGGCATGAAGCGCGCGAGGGAGGAGGAGC
CAGTTGTGTCGCTGGCGCTGTCGCTCAGGACAGACTCCTCGGTGACGTCC---ACCACGACGTCGG------ACAGCTCG
ACCGGTGCGCCGGCGCTGGTCCCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGGGAGTTCGT
GTGCAAGACTTGCGGGCGTGCCTTCGAGACGTTCCAGGCGCTCGGCGGGCACCGGACCAGCCACCTGCGCGGCCGCCATG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGCAGCGGAAGCGGCAGGAGGAAAAGCA---GCACGACTGCCAC
ATCTGCGGGCTGGGCTTCGAGACGGGACATGCGCTGGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCACTCAGC--
-GACGCCATGGACCGGTGGGTCGCGCTGTCGGATCAAGAGGCTGGGCACCAGCACGCCGCCGACCGGCCGCCAGTCTTGC
TCGAGCTGTTTCTCTAGTTACCTAGCTCGACCTCTCTGCTTGCTAATTCAGGACTTGTGCAAATCTTCAGAATGGTACAT
TAGCGTCCTGTTCGGAGTCCCTCCACTCCGCCGCTCCGCTCCGGGAGCTGGCAGAGCTGTAGTTAAAAAGGATGGAGCTG
TAGTCCCTCCACTCCGCACCTCCTCGTATTTTTAGGAGCCGGCGGGTTGCCGAACAGACCCTAGGTTTAGGTTAATTGTG
TCTTCAGAATTAGATAGCCTAATTGTTCGATAGAGTACGTTATTGCTGGTTAGAGTTCTCGACTTCTCGTTCATGGAATT
TTGCTTTGGATCGGTTCATTTTCTTGACCGGTCGACTAGGGATTTATGTGCACATATACATACCTAAAGACAAATTCTTT
TGCTCTAAATGCGATTGACATAATCTTGTCCTCAGACTGCTGTTCTATGAATATGCTGCTGTTCACCCCCATTTGTGTAT
TTTTTTGCGGGGGCATTTTGTATATGATCACAATTCACAAGTCCAATTCGGGGCCTAAATTTGTAAAATTCTGCAATATA
AAGCTCTACCTTCACAATTTAAGATCGCCCAAACGTTGACAATATAGTGGTGTCCGGAATATGTAGTGGTTTGAGATTTA
GAAAACCGCGATCCACTACTTGTGTTTTATCCGTGATCTGTCTGTTCCAAAACAGCTACAGTGAGTCTACATCCTGACAG
AGTGACACATCTAGGGATATGAGCATAATAGTGACAAGTGTCGACATTTGTGCAAGTGGAGAAGGAAATGAGAATCGAGA
AGATGCGATAAACATCTACGTTGAGATGTTAACGAGACCCCATCATTGAACCACAACAAGAGACACAAATATGAAGTTGA
AGTTCATGCTCATCGACAATGCATGCAATCCTAGTATAGCTCCGCCCATGCATGCTACCATTTCCAAGTGGCATCACTTC
AACAATGCATGCAATCATCCACCTACCACCCTTACTTGTGCTACCATCTCCAAGTTGAAGTTGCTAGCCCTCTCGAAGTG
TTGGAGGAAATGGTAATCAACAATACGCAAAATCATCGGCGGGGAAGCCAGAGTGTATCCAACAAAGAGAAATGAGTGAG
CAAAAAGTATGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNACTGTGGATAACTAAATGATTATGTATGTACAAATTGGAAAAATTGTACGGAGTGCTAAGTTTGT
CGCCAGTTGGTAGTTGCAGACCATTTGTCACATCCAAAAAATAGGAAATGGTGATGATTTTATATGATAATACGATGGTT
AGCGAAAGCTCTATGGTTTAGGCTTTGGTAATGGTATCAATAGGTGTGTTAGGAGGTAAGTTGAGGTAATGATGTGTGTC
AGGAGGTAAGTTGAGGTGATTCCGTGCATCATCTTCCTACCATCGTTACTTGTCGTCGGCGCAACCAACTCTTTAAGCCC
CTCGATGTGCAACAACCCTAATGATCACCCGCAACCCCCAATCAGCACCTATCAACCTGTTTTGTCGCCTCCTCCTAGGA
CTCTGTAGCTCGTTGTCAGTCGCTGCAACGTCCCCATATCCGACGAGGTCCTAGCTAGACCTTGCCGTGGTCGACGCTTG
TCATGTTGCCTCCAGTTTGTGCCTCTGGCAAAGTAAAAAAAATGAGTACGCCAATAATTTTGCAGCTGCCTGACATCTAG
CAAACATGCATAAAAAAGACGTAAAAGTCCTCTTTCATAATAAGAAGGTTATGAATGGAAGTTCAATTACATTCTCATTC
CCTTTGACAAATACTATTGTGAAAATATCACGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTTGGCATCACTCTGTATATCACAACAGATG
ACCTAACTTTTTTTTTCCTATATCTATACCCTGTATAGTGTCACAATAACTTTGAATATCAGCCATTGGGTATGCTCCAT
CCGATGGTTGAGAGACGGCGAATCCAAATAAATATCATCCGCTGTATAAATTTTTCATCACACAAGATTCTGCCACGTGG
CCTTTTCATTGAATCCCCACTATTGTCTCATATTATTCTAGAAGTATCTTCTTTTGATGCCAAGAATCTGATTCTCCAAT
AAAAAAAGCAATAGAACAATCTAGATTCTATAGATTTGGGACCTGACTAGTACAATTTGTATGGAAGAAAATAAAATGTC
AAGAATGCATTTCCCCTGCTACTACTATTATATATTTTCTGATGTGCAAAGCACGTAAATAATTTAACAGTACCGGATGG
AGCACGTATGTGCTAGAGCACACACCTGAAAGATTTGGTGCGATTGAAGATTTTTTCACATACTTCCTCTAGTACAAAGT
TGTACTATTCTCGAGACATTTATTTTAGGACGGAGGAAATACTATAGGAAGTTCCAAACCCTTCCTGCCCGTGTGCTCAC
GCCGGCGCCGCCGTCCAACTCCGGAGTCCGGATTAAATTAATGGATTAATTGCGGATTCCGGCCACCGCCCTCGTGGCCA
AGCAGCGGCCACGCGCGTCGTGGCGTGACAGGTGACGCCACTCCGCACCACACGTTCGCCGCCGGTCGACCGCGCTACGT
ACGGAGCTCGATCCAATCCATCACGTCGCGAACGTCGCGGTGGCTTCCGACGATTCGTCCGCAGGCGCCAGAGGACGGCC
AGCCAGCCCCCACCAAGTTGGCACACACGTATGCTCCCCCGGAAGCACCAAGCACGCCACCGTCTCCTGCCCACACAACC
TATATATAACCGCGGCCGCCCATGAGAGCATCCATCCATTCTTCCTCCTAGCACCGAGTTCTCATCACAGACCAACGGCA
CAACAGAGCATCGATCGAATTACAGATTACAGCGGATCGTTAAGATAAGCAGCAAATCCATGGGAGCGGGCATGAAGCGC
GCGAGGGAGGAGGCGCCATTTGTGTCCCTCGCGCTGTCGCTCAGCTCAGATTCCTCGACGTCCACCACCACCTCGGCGGA
CTCGGCCAGTGCGCTGGCGGCGGACGCCGGGAAAAGGACGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGCGAGT
TCGTGTGCAAGACGTGCGGCCGGGCCTTCGAGACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGGGGCCGC
CATGGGCTCGAGCTCGGCGTCGGCGTCGCCAGGGCGATCAAGGAGCGGAAGCGGCAGGAGGACAAGCAGCACGACTGCCA
CATCTGCGGGCTCGGCTTCGAGACGGGCCAGGCGCTCGGGGGCCACATGCGCCGGCACAGGGAGGAGATGGAGGAGATGG
CACTCAGCGGCGCCATCTATCGGTGGGTCGCTCTGTCGGATC------AGGAGGCGGGG---CACCAG---GCCGCCGCG
GACC---G---GCCGCCCGTCTTGCTCCAGCTCTTCGTCTAG--------------------------------------
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>chr5D_1077
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-------------------------------------------ATGGGAGCTGGGATGAAGCGCGCGAGGGAGGAGGAAC
CAACCGTGCCGCTGGCGCTGTCCCTCAGCACGGACTCGGCGT---CTTCC---GCCGTGACGTCGG------CGGACTCG
GGCGCCGCTGGGCCGG------CCAAGCGCA------GGAGGGGCGTCGTGGTGGCGACGTCGGGGGAGGGGGAGTTCGT
GTGCAAGACGTGCGGCCGGGCCTTCGCGACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCACG
GGCTGGAGCTCGGTGTCGGCGTCGCCAGGGCAATCAAGGAACGGAAAAAGCGCGAGGAGAAACA---ACACCAGTGTCAC
ATCTGCGGGCTGGGCTTCGAGATGGGACAGGCGCTCGGGGGGCACATGAGGCGGCACCGCGAGGAGATGGCACCACGC--
-CGCGCCGACGATCGCTGG-------------------------------------------------------------
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--------------------------GTCGCGCTGCTGCCGGATCAGGAGGTGGCGGGG---CAGCAG---GCCGCCGCC
GACC---AGCCGCCGCCCGTCTTGCTCGAGCTGTTCGTCTAGG-------------------------------------
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>chr5D_1077
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-------------------------------------------ATGGGAGCTGGGATGAAGCGCGCGAGGGAGGAGGAAC
CAACCGTGCCGCTGGCGCTGTCCCTCAGCACGGACTCGGCGT---CTTCC---GCCGTGACGTCGG------CGGACTCG
GGCGCCGCTGGGCCGG------CCAAGCGCA------GGAGGGGCGTCGTGGTGGCGACGTCGGGGGAGGGGGAGTTCGT
GTGCAAGACTTGCGGGCGGGCCTTCGCGTCGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGGGGCCGCCACG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGAGCCATCAAGGAACGGAAAAAGCGTGACGAGAAGCA---GCACGAGTGCCAC
ATCTGCGGGCTGGGTTTCAAGATGGGACAGGCGCTCGGGGGCCACATGAGGCGGCACCGTGAGGAGATTGCACTGCGC--
-AGCGCCGACGATCGCTGG-------------------------------------------------------------
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--------------------------GTCGCGCTGCTGCCGGATCAAAAGGTGGAGGGG---CAGCAG---GCTGCCGCC
GACC---GGCCGCCGCCCGTCTTGCTCGAGCTGTTCGTCTAGG-------------------------------------
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>chr5D_1077
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-------------------------------------------ATGGGAGCGGGCATGAAGCGCGCGAGGGAGGAGGCGC
AATTTGTGTCCCTCGCGCTGTCGCTCAGCACAGATTCCTCGGCAACGTCC---ACCACGACGTCGG------ACAGCTCG
ACCGGTGCGCCGGCGATGGTCCCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGCGGGAGAGTTCGT
GTGCAAGACTTGCGGCCGGGCGTTCGAGACATTCCAGGCGCTGGGCGGGCACCGGACCAGTCACCGGCGCGGCCGCCATG
GGCTAGAGCTCGGCGTCGGCGTCGCCAGGGTCATCAAGGAGCGGAAAAGGCAAGAGGATAGGCAGCGGCACGACTGTCAC
ATCTGCGGGCTTGGCTTCGAGACGGGCCAGGCGCTGGGCGGCCACATGCGGCGGCACCGCGAGGAGATGGCACTCAGC--
-GGCTCCGTCGACCGGTGG-------------------------------------------------------------
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--------------------------GTCGCTCTGTCGGATC------AGGAGGCGGGG---CACCAG---GCCGCCGTC
GACA---G---GCCGCCCGTCTTGCTGCAGCTGTTCGTCTAGCCTGCTAGCTGGATCT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>chr5B_1077
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ATGGGAGTGGGCATGAAGCGCGCGAGGGAGGAGGAGC
GGGTTGTGTCGCTGGCGCTGTCGCTCAGCACAGACTCCTCGGCGACGTCC---ACCACGACGTCGG------ACAGCTCG
ACCGGTGCGCCGGCGATGGTCCCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGGGAGTTTGT
GTGCAAGACTTGCGGGCGTGCCTTCGAGACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCATG
GGCTGGAGCTCGGCGTCGGCGTCGCCAGGGCCATCAAGCAGCGGAAGCGGCAGGAGGACAAGCA---GCACGACTGCCAC
ATCTGCGGGCTGGGCTTCGAGACGGGCCAGGCGCTGGGCGGGCACATGCGGCGGCACCGCGAGGAGATGTCACTCAGC--
-GGCGCCATGGACCGGTGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------GTCGCGCTGTCGGATC------AAGAGGCTGGG---CACCAGCACGCCGCCGTG
GACC---G---GCCGCCAGTCTTGCTCGAGCTTTTTGTCTAGTTAGCTAGCTGGATCT----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>chr5B_1077
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATGGGAGCTGGGATGAAGCGCGCGAGAGGGGAGGAGC
CAACTGTGTCGCTGGCGTTGTCGCTTGGCACAGACTCCTCGA---CGTCTTCTGCCGTGACGTCGCTGAGCACGGACTCG
GGCGCCGGTGCGCCGG------CCAAGCGCA------GGAGGGGCGCCGTGGTGGCGACGTCGGGAGAGGGGGAGTTCGT
GTGCAAGACGTGCGGCCGGGCCTTCCCTACGTTCCAGGCGCTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCACG
GGCTGGAGCTCGGCGCCGGCGTCGCCAAGGGCATCAAGGAGCGGAAAAAGCAG------------CGGCACGAGTGCCGC
ATCTGCGGAGTTGGGTTCGAGATGGGCCAGGCACTGGGGGGACACATGAGGCGGCACCGCGAGGAGATAGCAGCACTCAG
TGACGCCGGCGACCGGTGG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------ACCGCGCTGCTGCCAGATCAAGAGGAGGCGGGTCACCACCAG---GCCGCCGCC
GACC---A---GCCACCCGTCTTGCTCGAGCTGTTCGTCTAGGCAGCTAGCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---------S---------SS----------SS
-SSSSSSS-SSSSSSS-----S---------S--S---SS-----------------------SS---------------
---S-----S--------------------------------------------SSS----------S---S-------S
--------------------S--------------------------------SS-------------------------
--------------------------------------------------------------------------------
--------------------S-------------SSSSSSSSSSSSSSS-------------------------------
------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S---------------------------
---------S-SSSSSSS--------------------S---------------S-------------------------
------------SSS------------------S-S--------S------------------------------S-SS-
-------SSS----------------------------------------------------------------------
----------S--SSSSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------SSS-SSSSS-----------------------------------------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--S--------------------------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------S----------------SS-----
-------------------S------------------------------------------------------------
-------------------------------S---------------------S--------------------------
----S----------------S-S---------------S------S------------------------S-SSSS---
-S--------SS-SS-SSS---------S---------------SS-----------S-SSS----------S--S----
S-S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--S-------------------------------------------S--------S---------S-------S------
----SS-----S-----------------------SS-SSSSSSSSSSSS--S-------S-------------------
---S-----S---S-----SS-S---------------------S-----SS-----------------------S----
-SSS----------S---S----------S----SS--------------------S-----------S----S------
----S-----S----SS-------S-SS---S-----S-----------S----------------S--------S-S--
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_890
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGCTTGCAGC
GATTGGTTAG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------
>reverse_6435
--------------------------------------------------------------------------------
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----------------------------------ACGGTTTCTTGGCTGGATCA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------
