>input_sequence_71027
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-------------------------------------------ATGCTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCATCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGCATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAAAAGCCTATATCGCATGTGGGAGGTGTGCCACGAACAGCCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGAAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCTGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCGTCGAGTGCGATAGTCTGCGGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTACGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATACGTTGGCGAACTTCGGAAGGACGGAAGACCGTACTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4D_1_TraesCS4D01G277200
ACGCCTCCTAAGGGACCAACGGCTGGAGATGCTCTAAGAAACACCGTTGGAAACGCCG---TAAGGTGCACAGTATCCAC
ACTTGTGTTACAGCCCGCAAAATATAT----ACAGCATGGTCCATCCCGTACTGCAGACTTCGATTCCATTTATATTCCA
GCAGCTGGCAGCATATGAAGCTGTCCTCATCCAAACGGAAAGTGGGTCG-----GCGCATCCCGTGCACCGCTGGAGGTG
CCAAGCAAGTA--CTGAGTGAAACGAAAACGAAAGCAGCTGAACAAGAAAACAGCCGTCGTTCTCGGACCCATCCGGCGC
CTAACTACACGTACTACTCGGCGGCTTTTTTTTGGCAAACGGTCTGGCCGAAGCTAATCTCCCATGCCAA----------
----------ACTTGTTCTGCTCGATCGCTCGCTCG-----------GGGTTGGTTGAGGGCATGCAGATGCACTGCACG
CGCGTTACGTACGTAGGAGTAAATGCAGCCAACGACCGACGGAGCCGGCAACTAACCACCCGCTCCCAGCAAATCATGGG
AGGAATTTCGGGGAGGCGACCGGCCACTGCCAAGTCCCATGCATGCATCCTCCACGCTTCACGGATCCCGTATACTAGTA
CTAGCTTCTCTCTAGTTCCTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAATCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGCGACGTGCCGTCTGGGCATTATTATGGAGGTGCACTGCTTCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGAAGG
TTACTGATATATGCCCATTATATGGTCTAGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCGGACTATTGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGAGTGGCTCCTGAA
CCTAATTGCAGAAAGTAATGAAGGGGACCGGCTGCGCCTGATTATGCTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCATCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGCATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAAAAGCCTATATCGCATGTGGGAGGTGTGCCACGAACAGCCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGAAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCTGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCGTCGAGTGCGATAGTCTGCGGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTACGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATACGTTGGCGAACTTCGGAAGGACGGAAGACCGTACTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCCTTT
ACCCCGCAAAAAAAAAAGCTTCTCTCTAGTTCATCAGCTAGCTTAGGGTCTGTTTGGTTTCAATAAGTCAGGTGACTTAA
AACCAGTGACTTATAAGTCACGCCTGTTTGGTTGTCACCTGACTTATAAGTCACTTGACCACATCTTTTCATCCTGTTTT
TTTATGTAAAGGTGGTGGGACCCACGTAAAAGAGGGTGACTTATAAGTTTTAAGTTGGGTGGAGCAACTTATGACTTATA
AGTTGGGGTGATTTATAAGTTGGAACTGTTTGGCAAAATAAGTCACTTTTTTCACTTTTTAACTTATAAGTTGGTGACTT
ATTTGGAGCCCTTAGCTGCGCTCAAGCGAGGTATAGTAGTACTATCAAGCTATACGCCATGTTTGCGTGCGTGGCGATCG
AGCGATGGGCAGCGGCATGGCGCCGGCAGGTCACACGACACGTGCCGTGTCGGCGTATGGCACGGCAACCGTCGTGTTTT
GCCCATGCGCGGGCCAGATGCATCTCTCGTCCGTATGTGCGTACTCGCCGACCATCTGACACCAAGACTACCTCTGGACC
GAGTGATTCCGGTGCAGTTTTCGTCCATGGCCTGGCCTGGACCTGCAGAAAAATGTCGTTTAGAGTCGTGATGGCTACAG
TATTTTTTACGGATCTGCCAAAAATAAGTCGACTGAGACTAGTCTCTGTCGACTGGCCAGCCGTCCGATCTGTGTTGGCG
TGAAGATTCGCGCTGAGGCGCTTTGTCCCTCTTTTTGGCCCGTGTAAGGCGCAGACCGGCCCGTTTCATGTTTTACGTCG
AAGCTTGGCCGCGCGTGAGCGTTTGTGGTTTTGTGGGCTGGGTCAGTTTGTCCGAGGTGGGCTTCTTTTGTTTGTTTGTT
CTATCTTGTTTTTTTTTTTCTCGAGCCGCTGGGAGGGAAGGGAGACCAGACACCGTGGTAATTAAGAGGGGGAAGGAGAA
GAGGCCACCCGTGGTAAATATG
>chr4A_44
-------------------------------------------CCGTTGGAAACGCCGTAATAAGGTGCACAGTATCCAC
ACTTGTGTTGCAGCCCGCAAGATATATACACACTGCATGGTCCATCCCGTGCTGCAGACTTCGACCCCATTTATATTCCA
GCAGCTGGCAGCATATGAAGCTGTTCTCATCCAAACGGAAAGTCGGTCGGTGCGGCGCATTCCGTGCGCCGCGCTGGAGG
T--AGCAAGTA--CTGAGG-----GAAAACGAAAGCAGCTGAACCAGAAAACAGCCGTCGTTCTCGGACCCGTCCGGCGC
CTAACTACGCGTACTACTCGGCGGCTTC-TTTTGGCAAACGGTCTGGCCGAAGCTAATCTGCGACGCCGAGGCCGATCGA
AGTGGAATTGACTTGTTCTGC------------TCG-----------GGGTTGGCTGAAGGCATGCAGATGCAGTGCACG
CGCGCTGCGTAC------GTAAATGCAGCTAACGACCGACGGGGCCGGCAACTAACCACCGGCTCCCAGCAAATCATGGG
AGGAATTTCGGGGAGGCGGCCGGCCACTGTCACGTCCCATGCATGCATCCTCCACGCTTCACGGATCCCGTATACTG---
CTAGCTTCTCTCTAGTTCAT-----------------------------------CAGCTAGCTTAGCTGCGCTCA----
----------------------------------AGCGA-----------------------------------------
TAAGCCATGTCTGCGTGCGTGGCGATCGAGCGACGGGCAGCGGCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGGCGCCGGCCGGTCACCGACACGTGCCATGTCGGCGTATGGCACGGCAACCGTCGTGTTTTGCC
CATG-----------------CGCGGGCCAGAGGCATCTCTCGTCCGTATGTGCAT------------------------
-----------------------------------------------------------ACTCGCCGACCATCTCTCTGG
ACCGAGTGATTCCGGTGCAGTTTTCGT-----------------------------------------------------
----------------------------CCATGGCCTGGCCTGGACCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4B_58
---------------------------------------------------------G---TAAGGTGCACAGTATCCAC
ACTTGTGTTGCAGCCTGCAACATATAT----ACACCATGGTCCATCCAGTACTGCAGACTTCGATTCCATTTATATTCCA
GCAGCTGGCAGCATATGAAGCTGTCCTCATCCAAACGGAAAGTGGGTCG-----GCGCATCCCGTGCACCGCTGGAGCTG
CCAAGCAAGTATACTGAGTGACACGAAAACGAAAGCAGTTGAACAAGAAAACAGCCGTCGTTCTCGGACCCATCCGGCGC
CTAACTACACGTACTACTCGGTGGCTTT-TTTTGGCAAACGGTCTGGCCGAAATTAATCTGCGATGCCGAGGTCGATCGA
AGTGGAATTGACTTGTTCTGC------------TCGATCGCTTGCTCGGGGTGGCTGAAGGCATGCAGATGCAGTGCACG
CGCGTTACGTACGTA------AATGCAGCTAACAACCGATGGAGCCGGCAACTAACCACCCGCTCCCAGCA-ATCATGGG
AGGGATTTCGGGGAGGCGACCGGCCACTGTCACGTCCCATGCATGCATTCTCCACGCTTCACGGATCCCGTA--------
-TAGCTTCTCTCTAGTTCAT-----------------------------------CAGCTAGCTTACCTGCGCTCACGCG
TGATATAGTAGTAGTACGTACTGTACTACTATCAAGCTA-----------------------------------------
TAAGCCAGGTCTGCGTGCGTGGCGATCGAGCGATGGGCAGCGGCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGGCGCCGGCCGGTCACCGACACCTGCCGTGTCGGCGTATGGCACGGCAACC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTCG
TGTTTTGCCCATGCGCGGGCCAGATGCATCTCTCGTCCGTT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGTGCGTACTCGGCGACCATCTGATACCGAGACTACCTCTGGACC
GAGTGATTCCGGTGCAGTTTTCGTCCATGGCCTGGCTTG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr4D_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGCGACGTGCCGTCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCGGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCATCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAATAGCCTATATCGCATGTGGGAGGTGTGCCACGAACAGCCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGTCGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCGTCGAGTGCGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTACGCCATGGCGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATACGTTGGTGAACTTTGGAAGGACGGAAGACCGTACTGTGGTCA
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGTAAAAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chrUn_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAGTTGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGCGACGTGCCGCCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGTGGTGCAT
TTGTGGAGGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGATTGGCTCCTGAA
CCTAATTGCAGAAAGTAATGAAGGGGACCGGCTGCGCCTGATTATGTTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCATCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAGCCTATATCGCATGTGGGAGGTGTGCCACGAACAGCCCACAAATGGAGT-CCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCCGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCGTTGAGTGCGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTATGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATACGTTGGCGAACTTTGGAAGGACGGAAGACCGTACCGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGAAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chrUn_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTTGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGCGACGTGCCGTCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATCGCGTTTGGCTACTAACTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCGGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCAAAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGTTGTGGAGATGTTGGCATGTGTGCAACGAGA
TCACTCATGACAAACTGGCGCCGCCTGTGGAGGTATC----------------------------CCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCACAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAACCTATATCACATGTGGGAGGTGTGCCACGAATAGTCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGATGGCTCCTTTTCCCATGATGATGGGAGGGCCGGGACGGGAATGGTGCTTCATGACCAGGAAGG
GGCCATTATTTTCTCCGTGTGTCGCTCGCTATGGTCTTGCCCGGACCCTATACATGCTGAGCTGGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGTTGCCGTTTATCGCCGAGTGCGATAGTCTGCAGGCAGTGCAACTGATAAAT
GCCTCAGGAGAAGACCGCTCGCAGTATGCCATGGTGGTCTCGGAAGTGAAGCTTCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATGCGTTGGCGAACTTTGGAAGGACGGAGGACCGTACTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2D_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAGTCGTAGCGAGCAGGGCACCGGACA----
----------------------------------GGCGATGTGCCGTCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGACACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGGCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCAGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAATATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAACCTATATCGCATGTGGGAGGTGTGCCACGAACAACCCACAAATGGAATCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACGTGCCGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCGTCGAGTGCGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTACGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATATGTTGGCGAACTTTGGAAGGACGGAAGACCGTACTGTGGTCT
GGCTTCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATTCCTTTT
ACCCCGCCAAAAAAAAAAG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr1D_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGG-------
------------------------------------CGATGTGCCGTCTGGGAATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGTGGTGCAT
TTGTGGCGGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGCTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------TCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCGCAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGATGCAGAACAGCCTATATCGCATGTGGGAGGTGTGCCACGAACAGCCCACAAATGGGGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGGCCCTCTACATGCCGAGCTAGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGCCGTTTATCATCGAGTGTGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGGTCGCAGTACGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATACGTTGGCGAACTTTGGAAGGACGGAAGACCGTACTGTGGTCT
GGCTCCACACCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAA-TTCCTTTT
ACCCCGCAAAAAAAAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr3B_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCCTGAGGAAAAGCTTCGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACA----
----------------------------------GGCGACGTGCCGTCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAACTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCGGACTATGGCGGAGGTGTGGAGTATACCGAACGTCGAGTCAGTCCGTAACACCGGCCCAGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGTTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACTCATGACAAACCGGCACCGCCTGTGGAGGTATC----------------------------CCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTTGGGATCCAGCAGTATCCGCAAGGAGATTGGGACAAAGGGAAGATGACCATCCAACAGG
AAGGTGCAGAACAACCTATATCACATGTGGGAGGTGTGCCACGAATAGTCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGCGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCCGAGCTGGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGTTGCCGTTTATCGTCGAGTGAGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGCTCGCAGTATGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATGAGTTGGCGAACTTTGGAAGGACGGAGGACCGTACTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAAAAAAACTTC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr7A_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTCGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGTGACGTGCCGTCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAATTCCCTTGCCACATGGTCTAATAAATTTAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCGGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCGGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACTGGCTGCGCCTGATTATGCTACTGTGGAGATGTTGGCATGTGCGCAACGGGA
TCACTCATGACAAACCGGCGCCGCCTGTGGAGATATC----------------------------TCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCACAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAACCTATATCACATGTGGGAGGTGTGCCACGAACAACCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGTTCCTTTTTCCATGATGACGGGAGGGCC-GGACGGGAATGGTGCTCCGTGACTAGGAAGG
GGACATTATTTTCTCCGTGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCCGAGCTGGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGCTGTCGTTTATCGTCGAGTGTGATAGTTTGCATGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGCTCACAGTACGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATGCGTTGGCGAACTTTGGAAGGACGGAAGACCGTACTGTGGTCT
GGCTCCACTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2B_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTTGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GGCGACGTGCCATCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAACTCCCTTGCTACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTGGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCAGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCAGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAAGGGGACCGGCTGCGCCTGATTATGCTGTTGTGGAGATGTTGGCATGTGCGCAACGAGA
TCACCCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------CCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCACAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAACCTATATCACATGTGGGAGGTGTGCCACGAATAGTCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGTTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGTGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCCGAGCTGGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACAGAGTTGTCGTTTATCGTCGAGTGTGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGCTCGCAGTATGCCATGGTGGTCTCGGAAGTGAAGCATCTTATGAGTGAAAGGGAGTGTCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATGAGTTGGCGAACTTTGGAAGGACGGAGGACCGTATTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAAAAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>chr2B_614
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTGGCGCTTGAGGACAAGCTTTGTCCCTCTTCAGTCGCAGCGAGCAGGGCACCGGACG----
----------------------------------GACGACGTGCCATCTGGGCATTATTATGGAGGTGCCCTGCTCCTCC
TAAGGTGCGTGTGTTTGCATGGCGTTTGGCTACTAACTCCCTTGCCACATGGTCTAATAAATTCAGTCGACACATGGAGG
TTACTGATATATGCCCATTATGTGGTCTCGAGCGCGAGGACACTTTTCATGTGTTTTGCAGGTGCCCTCGGGCGGTGCAT
TTGTGGCAGACTATGGCGGAGGTGTGGAGTATACCGGACATCGAGTCAGTCCGTAACACCGGCCCAGAGTGGCTCCTGAA
CCTAATTGCAGAAAGCAATGAACGGGACCGGCTGCGCCTGATTATGCTGTTGTGGAGATGTTGGCATGTGCGCAATGAGA
TCACCCATGACAAACCGGCGCCGCCTGTGGAGGTATC----------------------------CCGTCGCTTTTTGCA
GAGCTACGTAACCTCACTGCTCGGGATCCAGCAGTATCCACAGGGAGATTGGGACAAAGGGAAGATGACCATCCAACAAG
AAGGTGCAGAACAACCTATATCACATGTGGGAGGTGTGCCACGAATAGTCCACAAATGGAGTCCCCCACCCGCCAACTGG
ACGAAGCTGAATGTCGACGGCTCCTTTTCCCATGATGACGGGAGGGCCGGGACGGGAATGGTGCTCCGTGACCAGGAAGG
GGCCATTATTTTCTCCGTGTGTCGCTCGCTATGGTCTTGCCCGGACCCTCTACATGCCGAGCTGGCTGGGTGCATGGAGG
GCATAGCTTTGGCCCTCCAATGGACGGAGTTGTCGTTTATCGTCGAGTGTGATAGTCTGCAGGCAGTGCAACTGATCAAT
GCCTCAGGACAAGACCGCTCGCAGTATGCCATGGTGGTCTCGGAAGTGAAGCATCTTATAAGTGAAAGGGAGTGCCATGT
TATTCATATTTCTCGAGAGCAGAATAATGTAAGCCATGCGTTGGCGAACTTTGGAAGGACGGAGGACCGTACTGTGGTCT
GGCTCCGCTCCGGCCCGGACAATATCCCTAGCTTGTGTAGGGAGGACCTTCTTGGCTCTTGAGTAATACAAATCCCTTTT
ACCCCGCAAAAAAA------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
---------S----------S-----------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------S----------------------------------------------------------
----------------------------S-------------------------------S-S-----S-----------
---------------------SSSSSSSSSSSS---------------------S---S--------------S------
---------------SSS-----------S--------------------------------------------------
-----------------------------S--S-------------------------------------------SSSS
---------------------------------------------------S----------------------------
---------------------------------------------------------------------S-----S----
----------------------------------------------------------------------------S---
---------------------S------S---------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------------------------------------------------------------------------S---
-----------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-----------S---S----------------
------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_430
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACTTGTTCTGCTCGATCGCT--------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>reverse_1937
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GTCACGCCTGTTTGGTTGTC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
