>input_sequence_71018
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----------------------ATGGCAATCACGTACCATGCACCGCGTCAATCAGGCGATCAACCAGTGGCACCCCGTG
---GCTCAAGGGTGGCCGCGGACATTGTCATGGACGACGGCACCGTGATCCGGACCACCGTTACGTCGTCCGCCTGTGAT
GTCTTGCTCTTTCTCCGGGAGCTCCAGGAACTATTCTGCAAAGAGATCCATGACCACAATTGCCTCAACAAGGTCCAAGA
GCACCA---------------------------CCATTGCCTCATCGTCGGCCTCGATACGGAGTGGCACCAAATCTCCG
TGACCGGCGGGAAGCCCCGGTACCAGATCGCCGTCCTCCAGCTCTGCGTCGGCGACCGCTGCCTTGTCTACCAGATTTTC
CACGCCGACTACATCCCTGCCGAGCTCGCGGCCTTCCTCGCCAACCCTGACTTCTGCTTCGTCGCCGTCGGCGTGGGTGG
CGACGTCAAGCGGCTGCACGACGACTGTAACCTTGAGGTGGCCCACACGATGGACCTGCCTCAGGTCGCGGCGGTTGTGC
TCGGCCGGCCAGAGCTCCGGCAGGCAGGGCTCAAGACCCTAGCGCGAGAGGTGATGAACACTCTCATCGAGAAGCCGAAG
AAGGTGATAATGAGCAAGTGGGCCGCGCCGCACCTGTCAAGGGAGCAGATCCGGTACGCCTGCATCGACGCCTTCGTGTC
CTTCGACGTTGGCCGCCGGCTACTCTGCGAACCCCGTGTTTAG-------------------------------------
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>chr3D_1_TraesCS3D01G239600
TCAAAGCAAACACAATTAACAATCATTACTGATCACCAACAATCACTATCGGATACCGACACG-ATGCGAGG-TTTTTAT
TTTTACATTGTTGGCATTTCATCGAGCACTTGGTGGCCGCGATTCTTGTTGCCGGCTGCGGCCGCCGCTCTAGCCGGAGC
AGTCGCCATAGGGGCTGCCGGAGGTGCAGCAAAAGGCGTTGGCGTAGGACAAGGCGCCGCTTTGGCTTTCTTCATCTTCT
TCTTCGCGGCCGCCTCCGCGAGCACCACCGCCGCCGCCGTCGGCTTTCGAGCCCATTTGCCTCCGATAGGTGCAGCGGGA
GGGCGGCGTGCCGTTGCCGGAGAGGCGGTGGCCACCCCGAAGACCATTGGAGCGGTTGGAGGAGGAGCTTGGACGCG---
GTGGGTCTTCTTCATACCCAAACTCTCCTTC------TTCGGCGGCGGCTACGCGTGGGTGGTTTCCAGCAGCGAAAAGC
CGGCGCA-GTGGCCGGCGGGGTGAGGGAAGGGGCCGGGCTATCCATTCCGGCCGGTCCGGCGGTCATT---GGCA-----
--------GCGGCGGCTGCGCCGACGGGAGACAGTGCAGCGCGCGCGGGGGGTGGGTGGGGGGGGGGTGCCAATGTTACT
CGACTGCGGCGAGATGGAGTAAATTTAGGAAAAATTTAGTGGAAATAGGGAGGTGGAGAAAT--TTTTACTCCACTAAAT
TTTTTAAAGGATGGGCTAGGTGCGTGGTAAGGAAGTAAAACTACTCCCTTATGGACTTTTATAGGGGATAGGTTAGAGTT
GCCGACAGTGCTCATTAAGCACAGCGCGTAGACCACCGAAACCTACTCGGACTCAGAGCACGAGCCAGAGTTCATTTCAG
CCCACGCTTGGACTCGCAGCATATACTATTATATGTGCGGG--------------------------------CTTGCTC
TATATCTGATTCGAGAAACGAAAAGTCTTGCCCTATATATGCGCCGGCGCAACGACTGAGTAATAACACCCAAAGCCAGG
AGCCCAGGACCCACCTCCTCCGATGGCAATCACGTACCATGCACCGCGTCAATCAGGCGATCAACCAGTGGCACCCCGTG
---GCTCAAGGGTGGCCGCGGACATTGTCATGGACGACGGCACCGTGATCCGGACCACCGTTACGTCGTCCGCCTGTGAT
GTCTTGCTCTTTCTCCGGGAGCTCCAGGAACTATTCTGCAAAGAGATCCATGACCACAATTGCCTCAACAAGGTCCAAGA
GCACCA---------------------------CCATTGCCTCATCGTCGGCCTCGATACGGAGTGGCACCAAATCTCCG
TGACCGGCGGGAAGCCCCGGTACCAGATCGCCGTCCTCCAGCTCTGCGTCGGCGACCGCTGCCTTGTCTACCAGATTTTC
CACGCCGACTACATCCCTGCCGAGCTCGCGGCCTTCCTCGCCAACCCTGACTTCTGCTTCGTCGCCGTCGGCGTGGGTGG
CGACGTCAAGCGGCTGCACGACGACTGTAACCTTGAGGTGGCCCACACGATGGACCTGCCTCAGGTCGCGGCGGTTGTGC
TCGGCCGGCCAGAGCTCCGGCAGGCAGGGCTCAAGACCCTAGCGCGAGAGGTGATGAACACTCTCATCGAGAAGCCGAAG
AAGGTGATAATGAGCAAGTGGGCCGCGCCGCACCTGTCAAGGGAGCAGATCCGGTACGCCTGCATCGACGCCTTCGTGTC
CTTCGACGTTGGCCGCCGGCTACTCTGCGAACCCCGTGTTTAGCTTCTGAAGATGCTCTGTCAGAAAACAGTTCAAGTTC
GCACTTAAT-TGTTCCGTAGATTTAGTTGTGTATGTATACACATTTGTTGGGATAAAATGTGAATACTTGGACCGATATG
GTTTTGTCGCTAGCTCGACGTTGGATGCTGAAATTAGGATTGATTTGTTGCACATTCTCTCGAAATAGGCTTTTGCCCCG
CTTTATAGATAAAAGAAAACACATCCTATCTGTAGGCTGATAAGGAAGCCAGTGTTAGACTAGTAGACGGTCCTCGATTC
AATTGAGATCTGGCGGTCACATATTGTGAA-----------CCCCATGGATAGGAAATAAATACCCACAAATCCCGTACG
-TAACTTCTCCCTAATTAAGCTCCCCATATCCTTCCCGATTTCCTCGCTGCCAACCCACGCACCTCCTAGATCCACTTCA
CCCCAGGCCTTGCATGCACATGCCTTCTCCACTCATCGTTGTCGAGCAACACGGCCACTTC------------TTTCCCA
TCCGCCGCGCCGGAGCGTCACCCTTCCGCACGTGCCGCGGTGCCCATCTCCAACTGGGGTGGCCACTGGTGTGGTTGCCT
TACCATGCAACCCGAAGGATCAATAGGTGTAGGGAGGACCAGAAGCCGTAAGAATCAGCTCAGGCCCCT-TTGGATGTTC
TTTTTTG-------CTGAATTTGTTGTGTCCATGCAGATACTATTT-TGATATTGTATGAGTACATATGCTTCCAAATTT
CCATGCTTGGTACGTA----------------------------------------------------------------
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---------TTATGTTTGTGTTTCTTCCCGACGTACAATTCGCCTCATACATA-CATGGCTTTAGTTCTTTACCGACTAT
GGTTTGCTTCATATGTTTCA----------------CCATGTCCAGCTTGCTTCATTTACATGCTTCGTAATGTTTTGTA
GGCGTTGAGTTTGAATTCAATTCAAACAACTCATTTTT---TAATTT-TTGCAGGGTCGACAGCAGCGGAAGAACACGCC
TTGCCGACAGTGAGCATAACATGATGATCAATACTAGGCACGGTCCGCAAC--
>chr3B_1
TCAAAGCAAGCATTATAAACAATCACTACCGATCACGAACAATCACTATCGAATACCAACGGG-ATGCGAGG-TTT-TAT
TTTTACCTTGTTGACATTTCATCGAGCATTTGGCGGC-GCGCTTTTTGTTGTCGGCTATGGCCGCCGCTCGCACCGGAGC
AGACACCGTAGGGGCAGCCAGAGTTGTCGCACGAGGCGTAGGCTTTGGACGAGGCGCCGCCGCGGTCTTCTTCATCTTCT
TCTTGGCGGC-ACCTCGGTGAGTGCCGCCGCCGCCGTCCTCGGCTTTTGAGCCTGTTTGCCTCTGATAGGTGCAGCGGGA
GGGCGGCGTGCCGTTGTCGGAGACGCCATGGCCACCCCAGACACCATTCGCGCGTTTGGAGGTGGAGCTTGGACCTG---
GTGGTTCTTTATCATTCTCAAGCTTTTTTCC------GACACTGGCGGCAGCGCGTGGGTGGTTTT---CGGCGAAAAGC
CGGCGTCGGTGGCCGGCGGGGTGAGGGGGGT-----GGCTATCCATTTCGGTCGGCTCGGAGGTCATC---GGTCGCAGT
G----------------GCGGGGGCGGGAGGCAGTACAACGCGGGAGGG-C----GAGAGGG---------AGTTTTACT
CGGCCGCTGCACGATGAAGTATATTTAGGGAAATCTTTGGGGGAATAGGGAGTTGGAGTAAATAATATACTCCGTTAACG
TTTTTAGGGGATTGGCTAGGTCCGCCGTAAGGGAGTAAA-----------------------------------------
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>chr1D_1
TCAAAGCAAACACTATCAACAATCAATACCGATCACCAACAATCACTATCACATAGAGACACG-ACGCAAGGTTTT-TAT
TATTACCTTGTTGGCATTTCGTCGAGCACTTGGCGGCCGTGATTCTTGTTGCCGGCTGCCGTCGCCGTTCGCGCCAGAGT
AATCGCCATAGGGGCTGCCGGAGTTGCAGTACGAGGCGTCGGCCAAGGATGAGGCGCCACTTTGGCCTTCTTCATCTTCT
TCTTGGCGGCCGCCTTCGTGAGCGGCGACGCCGTTGCCATCGGCTTTCGAGCCTGTTTGCCTCCGGTAGGTGCGGCAGGA
GGGCGGCCTGTCGTTGCCGGAGAGGCGGTGGCCACCCCGGAGACCATTGGAGCGATCGGAGGAGGACCTTGGATAC---G
ACAAGTCTTCTTCATACCCAAACTCTTATTC------GGCGGCTGCGGCGGCACGTGGGTGGTTTCCGGCGGCGAAAAGC
CAGCGCCAACGGCCGGCGGGGTGAGGGAAGGGGCCGGGCTATCCATTCCGTCCGGCCCGGCGGTCATC---GGTGGCGGC
GGAGGTGCGTGGCGGCTGCGTCAGCCAGAGACAGTGCGGCGCGGGTAGGGC----GAGAGGAAGAGGTGACAGTTTTGCT
CGGCCGCGGTGGGATTGAGTAAATTTAGGGAAATTTTGGAAGAAATAGGGTGGTGGAGTAAAAATTTCACTACACTAAGC
CGGATAAGGGAGGGGCTAGGTGCGCCGTAAGGGAGTAAA-----------------------------------------
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>chr3A_1
TCAAAGT-AACACTATCAACAATCATTACCGATCACCAACAATCACTATCGGATACCGAAACAAACGCGAGGTTTT-TAT
TTTTACCTTATTGGCATTTCATCGAGCACTTGGTGGTAGTGATTCTTGTTGTCGGCTGCAGCCGCCGCTCGCGCCGGAGC
AGTCGTCGTAGGG--CTCCGGAGTTGTAGGATGAGGCATCTGCCTAGGATGAGGCACCGCTATGGCCTTCTTCATCTTCT
CCTTTGTGGTCACCTCTGCGAGCGCCACCATCGCCGCCGTCGACTTTCAAGCCCGTTCGCCTTCGGTAGGTGTGGCAGGA
GGGCGACATGCCGTTGCTGGAGAGGTGGTGGCCACCCCGGAGACCATTGGAGCGGTTGGAGGAGGATCTTGGACGCGTGG
GTGGGTCTTCTTCATACCCAAACTTTTCTTC------GGCGGC---AACGGTGCGTGGGTGGTTTTCGGCGGTGAAAAGC
CGACGTCGATGGCCCGTGGGGTGAGGGAAGGGGCCGGGCTATCCATTCCGGGCGGCCCGGCAGTCATC---GGTGGCGGT
GACGGGGCCTGGCGGCTGCGTCAGCGGGAGATAGTGCGGCGCAGGAGGGAC----GAGAGGGAGAGGTGCCACTTTTAAT
TGGCCACGAC-GGATGGAGTAAATTTAGGGACATTTTAGGGAGAATAGGGAGGTGGAGTAATTTTTTTACTCCATTGAGT
TTCTTAAGGGATCAGCTAGGTGCACCGTAAGGGAGTAAAACAGAAATTCTAC----------------------------
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----------------------------------------------------------------TCCCTTATGGCC----
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---------------------------------------------------------------------------TTTTA
GGGGATCAGTTAGA------------------------------------------------------------------
-----------------------------------------------------
>chr7B_1
TCAAAGCAACCACTATCAATAATCATTACCAATCACCAACAATCAATATTGGATATCGACAAG-ATGCAAGGTTTT-TAT
CATTACCTTGTTGGCATTTCATCAAGCACTTGGCCACCATGA-TCTTGTTGCCGGCTGCGGCCGCCGCTCTTGCCGGAGC
TGTCGCCATAGGGGCTGCTGGGGTTGCAGCACAAGGCGGCGGCCTCGGATGAGGCACCACTTTGGCCTTCTTCATCTTTT
TCTTCGCGGCCGCCTCCACGAGCGCCGCCGCCGCCGCTGTCGGCTTTCGAGCCGGTTTGCCTCCGGTAGGGGCGGTGGGT
TGGTGGCGTGCCGTTGCCGGAGAGGCAGTGGCCACCCCGGAGACCATTGGAGCGGTTGGAGGAG---CTTGGACGT---G
GTGGGTCTTATTCATACCCAAACTTTTCTTCTTCGACGGCGGC---GGCGGTGCGTGGGTGGTTTCTGGCAGCGAAAAGC
CGGCGCCGGTGGCCGGCGGGGTGAGGGAAGGCGTCGGGCTAACCATTTCGGTAGACCCGACGGTCATT---GGTGGTGGT
GGTGTGGTGTGGTGGCTGCGTGGGTGGGAGATTGTGCGGC--GGGAGGGGC----GAGATAGAGAGGCGACACTTTTACT
CGGCCCCGACGGGATGGAGTTAATTTAGGGAGATTTCGAGGAAAATAGGAAGGTGGAGTAAAAATTTTACTCCACTAAAC
CAGATAATGGATCGGCTAGGTGCGCTGTAAGAGAGTAAAAC---------------------------------------
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>chr2D_18
-----------------AACAATCACTACCTTCCACCAACAATCACTATCGGATACCAATAAG-ACGCAGGGTTTT-TCT
TTTTACCTTCTTGGCATTTAATAGAGCACTTGGCAGCCGTGATGCTTGTTGCCGGCTGCGGCCGCCGCACGCGCTGGAGC
AGTGGACGTAGGGGCCACCGGAGTTGCAGCACGAGGCGTCGGCCCAAAACGAGGCGCCGCTTTGGCCTTCTTCATCATCT
TCTTTGCGGCCGCCTCGGCGAGCA------CCGCCGCCGTCGACTTTCGAGTCGGTTTGTCTCCGGTAGATGCGGCGCGA
GGGCGAAGTTCTGTTGCCGGAGAGGCGGTGGCCACCCCGAAGGCCATTGGAGCGGTTGGAGGAGG--CTTGGACGCG---
ATGGGT-TTTTTCATACCCAAACTCTTCTTC------GGCGCCGGCGGCGGTGCGTGGGTGATTTCCTGCGGTGAAAAGC
CGGCGCCGGTGGCCGGCGGAGTGAGGGAAGGGGCTGGGCTATCCATTCTGGCTGGCCGG---------------------
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>chr7D_80
--------------------------------------------------------------------------------
-TTCACCTTGATGGCATTTCATCGAGCATTTGGCAACCGCGATTCTTGTTGCCGGCTGCGGCCGCCGCTCGCGCCGAAGC
TGTCGCCGTAGGGGCTG--AGAGTTGCAGCATGACGAGGCGGCCTAGG--GAGGCGCCACTTTGGCCTTCG---TCTTCT
TCTTCGCGGCCGCCTCCACGAGCGCCAACATCGCCGCCGTTGGCTTTTGAGCCTGTTTGCCTCCGGTAGGTGCGGCAGGA
GAGCGGCGTGCCGTTGCCGGAGAGGCGGTGGCCACCCTGGAGACCATTGGAGCGTG-GGAGGAGGAGCTTGGACAC---G
GTGGGTCTTCTTCATACCCAAACTCTTCTTTAGAA----CGCC---GGTGGCGCATGGGTGGTTTCTGACGGCAAAAAGC
CGGCGCCGGTGACCAGCGGGGTGAGGGAAGAGGCCGGGCTATCCATTCCGGCCAGCCCGACGGTCATC---GGCGGCAG-
--CGGGGTGTGGAAGCGGCATCGGCGGGAGACAGTGCGGC--GAGAGT-------------GAGAGGCACCAC-TTTTAT
CGGCCGCAGCGGGATGGAGTAAATTCAGGGAGATTTCAGAGAGAATAGGGAGGTGGAGTAAAAATTATACCCCGTTAACT
TTTTTAAGGGATCGGCTAGGTGC---------------------------------------------------------
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>chr4D_204
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---------------------------------------------AGGACGAGGCGCCGCTTTGGCCTTCTTCATCTTAT
TCTTCACGGCCGCCTCCACGAGCGCCGC---CGTCGCCGTCGACTTTCGAGCATGTTTGCCTCTGGTAGGTACGGCGGGA
AGGCGGCGTGCCGTTGCGGGAGAGGCGGTGGCCTCCCCGGAGACCATTGGAGCAGTTGGAGGAGGAGCTTGGACGC---G
GTGGGTCTTCTTCATACCTAACCTCTTCTTC------TTCGGC---CACGGCGCGTGGGTGGTTTCCAGCGGCGAAAAGC
CGGCGCCGGTGGCTGGCGGGGTGGGCGAACGGGCCGGGCTATCCATTTCGTCCTGCCCGGCGGTTGTGGGTGGCGGCGG-
--CGGGGCGTGGCGGCTGCGTCGGCAGGAGGCAGTGCGGCGCGGGAGGGGC----GAGAGGGAGAGGCGCCACTCTTACT
CGGCCGCGGCGGGATAGAGTGAATTTAGGGAGATTTCAGGGAGAATAGGAAGGTGGAGTAAAA-TTGTACTCGGTTAAAT
TTTTGAAGGGATCGGCTAGGTGCACCGTAAGGGAGTA-------------------------------------------
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>chr3B_777
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------AGTGCTCATTAAGCACAGCGCGTAGACCACCAAAACCTACTCGGACTCAGAGCACGAGTCAGAGTTCATTTCAG
CCCACGCTTCGCCTCGCCGCATATA------TATGTGCGGGCAGAGCGGTCCAAACTACTAGCTCGTACCAACCTTGCTC
TATATGTCATTCGAGAAAGGAAAATTCTTGCCC--TATATAAGCCGGCGCAACGAC-GAGTAATAACACCCAAAGCCGGG
AT--------CCACCTCTTCCAATGGCAATCACGTACCATGCACCGCCTCAACCAACTGAGCAACCAGTGGCACCTCGTC
ATCGCTCAAGGGTAGACGCGGACGTCGTCATGGACGACGGCACCGTGATCCGGACCACCGTTACGTCGTCTGCCTGTGAT
GTCTTGCTCTTTCTCCGGGAGCTCCAGGAACTATTCTGCAAAGAGATCCATGACCACAATAGCCTCAGCAAGGTCCAAGA
GCAGCAAGGCCTGGAGGAGGTCCAACAGCACCTCCATTGCCTCGTCGTCGGCCTCGATACGGAGTGGCACCAAATCTCTG
AGACCGGCGGGAAGCCCCGGTACCAGATCGCTGTCCTCCAGCTCTGCGTCGGCGACCGCTGCCTTGTCTACCAGATTTTC
CACGCCGACTACATCCCTGCCGAGCTCGCGGCCTTCCTCGCCAACCCTGACTTCTGCTTCGTCGCCGTCGGGGCGGGTGG
CGACGTCAAGCGGCTGCATGACGACTGTAACCTTGAGGTGGCCCACACGATGGACCTGCCTCAGGTCGCGGCGGTTGTGC
TCGGCCGACCAGAGCTCCGGCAGGCAGGGCTCAAGACCCTAGCGCGAGAGGTGATGGACACTCTCATCGAGAAGCCGAAG
AAGGTGACAATGAGCAAGTGGGCCGCGCCGCACCTGTCATGGGAGCAGGTCCGGTACGCCTGCATCGATGCCTTCGTGTC
GTTCGACGTTGGCCGCCGGCTACTCTGCGAACCCCGTGTTTAAGTTCTGAAGATGCTCGGGTT--AAGCATTGCAAGTTT
GCGCTTAATTTGTTCCGTAGATTTAGTTGTGTATGTATACACGTTTGTTGGGATGAAATGTGAATACTTGGACCGATATG
GTTTTGTCGCCAGCTCGACGTTGGATGCTGAAATTAGGATTGA-------------------------------------
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>chr3A_1924
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----------------AAACACTT-CTATCTGTAGGCTGATAAGAAGGCCAGCGTCAGACTAGT-GATGGCCGTCGATTC
AATTGAGATCTGGCGGTCACATATTGTGCAAAAAAAA-------------------------------------------
-----------------AAGCTCCTCATATCCCTCCCGATTTCCTCGCTGCCAACCCACGCACCTCCCAGATCCACTTCT
CCCCTGGCCTTGCATGCACGGGCCTTCTCCTCTCATCGTCGTCAAGCAACACGGCCACTTCACCGGCCACTTCTTTCCCA
TCCACCGCGCCAGAGCGCCACCCTTCCGTACGTGTCGCGGTGCCCATCTCTAGCCGGGGTGGCCGCTGGTGTGGTTGCCT
AACCATGCAACCCGAAGAACCAATAGATGCAGGGAGGATCACAAGCCGTAAGAATCAGCCCATGTCCCTGTTGGATGATC
TTTTTTG-------CTGAATTTGTTGTGTCCATGCAGATACTACTT-TGATATTGTATGAGAATATATGCTTCCAAATAT
TCATGCTTGGTACCTA----------------------------------------------------------------
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---------CTATATTTGTGTTTCTTCCGCACATACAATTC---------------------------------------
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>chr7D_1924
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----------------AAACACTTCCTATCTATAGGCTGATAAGACGGCCAGCGTCAGACTAATAGATGGCTGTCGAATC
AATTGAGATCTGGCGTTCACATATTGTGCAAAAAAAAAATCCCCCATGGATAG----------------------GTACG
-TAACTTCTCCCTAATTAAGCTCCCCATATCCCTCCCGATTTCCTCGCTGCCAACCCACGCACCTCTCAGATCCACTTTT
CCCATGGCCTTGCATGCACGGGCCTTCTCCTCTCATCGTTGTCGAGCAGCACGGCCACTTCACCGCCCACTTCTTTCCCA
TCCACCGCGCCAGAGCACCACCCTTCCGTACGTGTCACGGTGCCCATCTCCAACCGGGGTGGCTGCTGGTGTGGTTGCCT
AACCAATCAACCCGGAGGATCAATAGATGCAGGGAGGATCGGTAGCCGTAAGAATCAGCCCACGCCCATGTTGGATGATC
TTTTTTG-------CTCAATTTGTTGTGTCCATGCAGATACTATTT-TGATATTGTATGAGTATATATGCTTCCAAATAT
CCACGCCGTCACACGCCTGGCCTGGTTGGTGCCTGTACTCTGCCTGCTACTTGTTTGTTTGGTGTCCTGATATAGAAGAT
GCGTACCTGGCCTAGCCATGTGATTAGCCTGGTCCAATTAAAAAATAGGAAAGAAAAGAAGTTGCTTATCCAGGCAGGGT
ATTTAGCCTGGCCAGGCGTCCCATTCTTTGTGCCTGGAGGTGCTACAGTAGCAGTCTGGTAGTATTTAAACACTTTAAGA
ACTCTGACACACAGCAAATACTCTGACAAACAGCAGCAGAGCTATGGACTCCAACCAAACGCACATGCACGAGGCCAGCC
TGGCCAGGCAATATTTCACATCTTCTCAGGCTAGATCTAGACGCCCAATTTGCCCAGGCACGGTGTTCAGGCATCGATCC
AAACTGACCCTATATTTGTGTTTCTTCCCCACATACAATTCGCCGCATGCATA-GATAGCTGTAGTTCTTCACCAAGTAT
AGTTTGCTTCATATGTTTCATACATGCGCTTCTACATTATGTCCAGCTTGTTTCATTTACATGCTTCCTAATGTTTTGTA
GGCGTTGTGTTTGAATTCAGTTCAAACAACTCATTTTT---TAGTTT-CTGCAGCGTTGACAACAGCGGAAGAACACGCC
TTGCCGACAGTGAGCCTAA-ATGATGATCATTACTAGGCACGGTTCGTAAC--
>chr6D_2018
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-----------------------------------------CCCCATGGATAGGAACTAACTACCCACAAATCCCGTACC
ATAACGTCTCCCTAATTAAGCTCCCG-TATCCCTCCCGATTTCCTTGCTGCCAACCCACGCACCTCCCAAATCCATTTCT
CCCCTGGCCTTGCATGCATGTGCCTTCTCCTCTCATCGTCGTCGAGCAACACGGCCACTTC------------TTTCCCA
TCCACCGCTTCGGAGCGCCACCCTTCCGTACGTGCCGTGGTGCCCATCTCCAACTGGGGTGGCCACTGGTGTGGTTGCCT
GACCATGCAAGCCGAAGGATCAATAAATGCATGGAGGACCAGAAGCCGTAAGAATCAACCCACGCCCCTTTTGGATGTTC
TTTTTTG-------CTGAATTTGTTGTGTCTATGCAGATACTATTT-TGATATTGTATGAGTATATATGCTTCTAAATTT
CCATGCTTGGTGCGTA----------------------------------------------------------------
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---------TTATATTTGTGTTTCTTCCCCACATCCAATTCGCCTCGTACATA-CATAACTGTAGTTCTTCACCGAGTAT
AGTTTGCTTTATATGTTTCATACATGCGCTTCTAAACCGTGTCCAGCTTGCTTCATTTAAATGCTTCATAATGTTTTGTA
GGCGTTGTGTTTGAATTCAATTCAAATAACTCATTTTG---TAATTT-TTGCAGGGTCGACAGCAGCGGAAGAACACGCC
TTGCCGACAGTGAGCATAACATGATGATCAATACTAAGCACGGTCCGCAAC--
>chr3D_2114
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----------------------------------------------------------CGCACCGCCCAGATCCCCTTCT
CCGATGGCCTCGCACGCACCTG------CCTCCTCTTCTCTTCTAGCAGCACGTCCACTTC------------CTTCCCT
TCCACCGTGCTGGAGGGCCACCCTTCCGTACGTGGTGTCGTGCTCATCTCCAAC-GGGGTGGCCGCTGGTGTCGTTGCCT
AACCCTGCAGCTCGA-GGATCATCAGATGGCCCGAGGATAAGAAACCATGAGAACAAGTGCGCGTCCCTTTTGGCTGAGT
TTTTTCA-------CTGTGCTCGTTGCGCTACTA----------TT-TGAGAT--TATATGGATATATGCTTTCAAATTT
CCATGCTTCCTACGTA----------------------------------------------------------------
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---------TCATATTTGTGCTTCTTCCTGGCATACAATTCGCTTCATACATAACATAGTTGTACTTCTTCACAGTGTAT
GGTTTGCTTCGTATGTTTGATACATACGCTTCTATGCTGTGTTCAACTTGTTTCCTTTGCATGCTTCGTAATGTTTTGTA
GGCGTTGTTTTTGAATTCAAGTCAAACAACTCATTTCTTTATAATTT-TTGCAGGGTCGATAACAAGAGAAGAACATGCC
TA-CCGACAACGAGAATAACATGATG---------------------------
>chr4D_2114
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----------------------------------------------------------CGCACCGCCCAGATCCCCTTCT
CCCATGACCTCGCACGCACCTG------CCTCCTCTTCTCTTCTAGCAGCACGTCCACTTC------------CTTCCCT
TCCACCGCGCTGGAGGGCCACCCCTCCGTACGTGGTGT-GTGCTCATCTCCAAC-GGAGTGGCCGCTGGTGTTGTTGCCT
AACCATGCAGCTCGA-GGATCACCAGATGGCCGGAGGATAAGAAACCATGAGAATAAGTGCGCGTCCCTTTTGGCTGAGT
TTTTTCG-------CTGTGTTCGTTGCGCTACTA----------TTATGAGAT--TATACGGGTATATGCTTTCGAATTT
TCATGCTTCGTACGTA----------------------------------------------------------------
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---------TCATATTTGTGCTTCTTCCTGGCATACAATTCCCTTCATACATAACATAGTTGTACTTCTTCACAGTGTAT
TGTTTGCTTTTTATATTTGATACATACGCTTCTATGCTGTGTTCAACTTGTTTCCTTTGCATGCTTCGTAATGTTTTGTA
GGCGTTGTTTTTGAATTCAAGTCTAACAGCTCATTTCTTTATAATTT-TTGCAGCGTCGACAACAAGAGAAGAACATGCC
TA-CCGACAACGAGAATAACATGATG---------------------------
>chr2B_2116
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------------------------------------------------------------CACCGCCTAGATCCCCTTCT
CCCATGGCCTCGCACGCGCGTG------CATCCTCCTCTCCACGAGTAGCAGGACCACTTC------------CTTCCCG
TCCACCTCGTTGGAGCGCCACCCCTCCGTACGCGGGGCCGTGGCCATCTCCAAC-CGGGTGGCCGCTGGTGTTGTTGCCA
AACCATGCAGCCAGA-GGATCACTAGATGGCCGGAGGATCA-AAACCATGAGAATAAGCATGCGTCCCTTTTGGCTGAGT
TTTCTCACAGTATTCTGTATTCGTTGTGTCCATGCA-ATACAACTT-TGAGAT--TGTACGGGTATATGCTTTCAAATTT
CCATGCTTTGTACATA----------------------------------------------------------------
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---------TCATACTTGTGCTTCTTCCCGGCATACAATTCGCTTCATACATAATATAGTTGTAGTTCTTCACGGCGTAT
AGATTGCTTCGTATGTTTCATAGACGCGCTTCTATGTTGTGTTCAACTTGCTTCCTTCGCATGCTTCGTAATGTTTTGTA
GGCGTTGTGTCTGAATTCAAGCCAAACAACTCATTTGTTTTTAACTTTTTGCAGGGTCAACAACAACAGAAGAACATGCC
TA-CCGACACTGCGAATAA-CACATGATGGTTGATACAAGGCAGGTGCACAAC
>SNPs
-------------S--S------------S----------------------------------------------S---
------S----------------------------------------------------------------S--------
-----------------------S-------S-------S---S------S---------------S-------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------S----------------------SS-----------------------------
------S------------------------------------------------S------------------S-----
---------S----------S--S-------------------S-S----SSSSS-S-S---S-S-------S-S-----
--S-S------S-----------------S---S-----S------------------S---------------------
-------S----------------SS------S--------SSSSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-------------------------------S--------------------------S---------------
---------S-S-----S-------SSSSSS-------------------------------------------------
-----S-S----------S-----S--------SS-----SS--------------S--------------------S--
-SSSSSSSSS-------S---S-------------------------S----S--SSS--S--------------S---S
-------------S-S-------S-S--------------------------------------------S---------
------------------------------------------------------------S------S------------
---S---------------------------------------S----------------------------------S-
S------------------------------S------------------------------------------------
-----------------------------------------------------------------------S-S------
------------------S-------------------------------------------------------------
-------S------------------------------------------------S-----------------------
-------S-------------------------------S--------S-------------------S-----------
S-----------------------------------------SS--------------S-SSSSS--S--S-S------S
--S---------------------------------------S-----------S-------------------------
----------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS------S---------------------S-S-----S--S-----------S--S-S-------
----------------------------S---------------------------S---S-------------------
--------------------------------S----------------------------------------------S
----S--------------S----------S-------------------------------------------------
---S-------------S----------S---------------------------------------------------
S-------------------------S--S-----------------------------S--S-----------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------S------------------------S---S--------S-----S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_643
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GGGGTGCCAATGTTACT
CGA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1986
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------TAGGCTTTTGCCCCG
CTTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
