>input_sequence_71013
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-----------------------------------ATGTCTTCGCCGGCTGCTCTGCCCGCAGATGAGATACCCATGGGT
CTGGTGCGCCTCGGAAGGCAACATCTGCAATTGGACAACCACTTCTCCGATACGTGCCGCCGGGACCGCTTCTGCCTGCG
CTGCAACGTGGCTTACTGCTCCCACTGCTGCGGCAATCACCACTTTCACCCGGAGTGGCCGGACCTCCGGGTCCTCCCCA
TCGACCTTGACACCGAAGGCCGGCCCATATTCCCAACCCGGACGGCGCCGGCGCCGGACGGGTACCCGATACCGCCGGAT
GTAGCCAAGTTCATGAGGGCGCAGGACTACACCTCGCCGTTACCAAGGGATGCCTTCTGCATTCACTGTTCCAAGTCCTT
CCGCGCCGACGTCTGCGCCCACCACGGCGACCACGCGCGCCTCCGGGACTGCGTGCTCCGCATCGAGAAGCGCGGCTGGA
GGATCTGCATCAGGTGCGTGGGCAACGAGTGGTGGGTGCCCCACATCGGCATAGCGCTCGGAGATCCGGTGCACGTGGAC
GAGCAGGGGCGGTACGAGCTTCTCCCAGTGCTGACGCGGGTACGGGGTCCGTGCGTGGGGTGTGGCATCGGCGCCCATCG
GATTCCACGCGAGTTCTTCCCGTTCTGCTCCGAGACTTGCACCCGCAAACACATTCGCCGCATTGAAGAACGCCGGGAGG
CCAGGCTCGCCGCTCGGCGCTTGTAG------------------------------------------------------
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>chr3B_1_TraesCS3B01G169900
GACCGGGTCAATAATTTCTCAATGAGTTCTTTTAATCAATTA----TGCTCTTTAGTCTTGGAGCTTTTTCACCCAATTG
AGGTATACAATTTTGTATTTGGTTCATGATTTTGACAAAGTCAACGA--TTT----------------------------
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-----------------------------TTTGAATCAATAGGCAACAACCAGCCTATAAAAAGATATAAGTCACGCGCA
CTCTCTCACCACCTAGAAAAAAAAGAAACGCCAACATATGATA-TGTAGCATCAATAGAGTATATGCATCCACCGATGTA
GAAAA---TTCCT-CATATAAGTATGGGTTCGTTAGCAGATAATACATAATCACATCGTGAAA-GGCCCATTAAAAATTG
TA--TTGTAAA---ATAAAAAGAATACACACTCCATCATCTCCCTCACTCGCCGACCCAAATACTC-----GTTCCAAAA
TATAATGTGT---ATCTGTTTTTTGAAAATCAAATTTCTTTAAGTCT-GACCAAGGTCAAAGCAAAAA--AAATCAACAT
CGACGATAA----GAA--A-------------AAAAATCATTTCATGGTGAATCTAACGATAGTGATTTGATATTATGAA
TATTGGCATATTTCTCTATAAATTTGGTCAAACTTATTGAGGTTTTACTTCTCCAAAAAGTAAAAAATTATATTCTACTC
CCTCCGTCTCATAATGTATGACGTTTTTTGACACTACACTAGTATAAAAAAACGTCTTACATTATGGGACGGAGGGAG--
-------------TACGTCTTATATTTTGCACAGACACAGTAACTTTTTTATGAATGAGTTGGCCTCGCCGGCTCAACAG
GCTTTG--------------------------------------------------------------------------
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-------------------------------------------AACTTTTTTATGAAAATTCAACAACACCAACCGCGCG
GC----AGCGCGCCAACCCTTCTAGTCTA---------------------------------------------------
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--------------GTATTAATCTACGCCTTCCGAATTGTGAGCGATCGCCCCGGCGTAATGGCCGCAGATGCAGTCGCC
G----------------------------ACTCGGAACCCTACCTCGTATTGGGCGCGTGACGTGCCAT-----------
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-------------------------------GGGTCTATATATAGCCA---TGACATGGATGGCCCTGCGATCAA-----
------------CTAGATAGAAATCGAACCGATCGATGTCTTCGCCGGCTGCTCTGCCCGCAGATGAGATACCCATGGGT
CTGGTGCGCCTCGGAAGGCAACATCTGCAATTGGACAACCACTTCTCCGATACGTGCCGCCGGGACCGCTTCTGCCTGCG
CTGCAACGTGGCTTACTGCTCCCACTGCTGCGGCAATCACCACTTTCACCCGGAGTGGCCGGACCTCCGGGTCCTCCCCA
TCGACCTTGACACCGAAGGCCGGCCCATATTCCCAACCCGGACGGCGCCGGCGCCGGACGGGTACCCGATACCGCCGGAT
GTAGCCAAGTTCATGAGGGCGCAGGACTACACCTCGCCGTTACCAAGGGATGCCTTCTGCATTCACTGTTCCAAGTCCTT
CCGCGCCGACGTCTGCGCCCACCACGGCGACCACGCGCGCCTCCGGGACTGCGTGCTCCGCATCGAGAAGCGCGGCTGGA
GGATCTGCATCAGGTGCGTGGGCAACGAGTGGTGGGTGCCCCACATCGGCATAGCGCTCGGAGATCCGGTGCACGTGGAC
GAGCAGGGGCGGTACGAGCTTCTCCCAGTGCTGACGCGGGTACGGGGTCCGTGCGTGGGGTGTGGCATCGGCGCCCATCG
GATTCCACGCGAGTTCTTCCCGTTCTGCTCCGAGACTTGCACCCGCAAACACATTCGCCGCATTGAAGAACGCCGGGAGG
CCAGGCTCGCCGCTCGGCGCTTGTAGTGTAGTAATCAGGTCAGAGGAGTAGCTTTAATCGTCT---CTACTACTTGTACG
CAGGTTTGTAAGTCGGACATGAGTTCTTATAGATCTTTAATTTGACTAGTGAAATATGTTATGTACGCCATAAAAATAGT
TGGTTTGTCGTCAAGATGAAGTTTCTAAACATACTTCCTCGGTTTCTTTCTACTCTTCAAATAAGATTTATCTGAAGTCA
AACTTCATAGAGTTTAATCAACTTTATAGAAAAATATCAACATTCATGATACGACATTCAGTGCATCATGAAATTTATTT
TTATGACGGTGGTATTGCACATGTTGATATTTTTTAATATAGATCGATGGCTACTCCTCCGATGCGAAATTGCGCATCAT
TCGCATGCCTGTAGCAGCTTCAAATAGATCATATATTAATTCTCTCTCTAACAATATAGAAAAAAGGAGTCTGTGCGCCG
AGATCCGCCATAAAAGGTCCAAGTCATAGCAAGTGAGAAGCTATCCGGCTTAATGGCCCGCGGGTCTGACACAAGGTTAG
AATCTGAACTCTTCGAGAGTGGTATCTCACTGATGGCTCCAACCCCCCCCCCCAAGGGGGCTTTGTTCGCCTTCCACCTA
AGTTGCACAGGAAAGGCCCAAAGCCAATCCCAGGAAACAATAAAGCTTCATAGGAACAGGTAGTCCGCATCTTCACAGAC
ATGTCTATTTCACCGAGCCTCTCTCCGAGACATTGCCCAGATCGTTACGCCTTTCGTGCGGTCGGAACTTACCCTTGGTC
ACACCTTACGAAATTTGACTTGAGACTAATCTTATATGTGAGTAAAATAAAAGAAATGGAGGGAGCATATTTTTATGGCA
TATTACACGTATTTTATCTTTGAATTGAAGACTTAAAATCCATTGTTTCTGGTTTCTTCATCTAGGGGTTGTATTACACA
TAAGTTGAAAGCGTTTTTTTTTACTTCTTATTAAGTTTTGTCGCTAGGGCACATGAGTTGAATGCACTT
>chr3B_1
GACTGGGTCAATAATTTCTCAATGAGTTCTTTTAATCAATTA----TTCTCGTTAGTCTTGGAGCTTTTTCACCCGATTG
AGGTATACAATTTTGTATTTGGTTCATGATTTTGACAAAGTCAACGA--TTT----------------------------
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-----------------------------TTTGAATCAATCGGTAACTAGA-------AAAAAGATATAAATCACACGCA
CTCTCTCACCACCTA-AAAAAAAAGAAACGCCAATATATGATA-TGTAGCATCAATAGAGTATATGCATCCACCGATGTA
GAAAG---TTCCT-CACATAAGTATGGGTTCGTTAGCAGATAATACATAATCACATCGTGAAA-GGCCCACTAAAAATTG
TA--TTGTAAA---ATAAAAAGAATACACACTCCATCATCTCCCTCACTCGTCGACTCAAATACTC-----GTTCCAAAA
TATAATGTGT---ATCTGTTTTTTGAAAATCAAATTTCTTTAAGTCT-GACCAAGGTCAAAGCAAAAAAAAAATCAACAT
GGACGATAA----GAA--A-------------AAAAATCATTTCATGGTTAATCTAACGATGGTGATTTGATATTATGAA
TATTGACATATTTCTCTATAAATTTGGTCAAACTTATTGAGATTTTACTTTTCTAAAAAG---------------TACTC
CCTCCGTCCCATAATATAAGAACGTTTTTGACACTAGTGTAGTGTTAAAAACTTTCCTCTATTTTGGGACAGAGGGAGTA
AAAATTTATATTCTACGTCTTATATTTTGCACAGACACAGTAACTTTTT-ATGAATGAGTTGGCCTCGCCGGCTCAACTG
GCTTTG--------------------------------------------------------------------------
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-------------------------------------------AACCTTTTTATGAAAATTCAACAACACCAACCGCGCG
GC----AGAGCGCCAACCCTTCTAGTCTA---------------------------------------------------
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--------------GTTCTAATCTACGCCTTCCGAATTGTGAGCGTTCGCCCCGGCGTAGTGGCCGCAGTTGCAGTCGCC
GGGCCCACGTTAATTTCATCTAGATCCTGACTCGGAACCCTACCTCGTATTGGTCGCGTGACGTGCCAT-----------
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-------------------------------GGGTCTATATATAGCCA---TGACATGGATGGCCCTGCGATCAA-----
------------CTAGATAGAAATCGAACCGATCGATGTCTTCGCCGGCTGCTCTGCCCGCAGATGAGATACCCATGGGT
CTGGTGCGCCTCGGAAGGCAACGCCTGCAGTTCGACAACCACTTCTCCGAGACGTGCCGCCGGGACCGCTTCTGCCTGCG
CTGCGTCGTGGCTTACTGCTCCCACTGCTGCGGCAATCACCACTTCCACCCGGAGTGGCCGGACCTCCGGGTCCTACGCA
TCGACCTTGACACCGAAGGCCGGCCCATATTCCCAACCCGGACGGCGCCGGCGCCGGACGGGCACCCGATCCCGCCGGAC
ATAGCCAAGTCCATGAGGGCGCAGGACTACACCTCGCCGTTACCAAGGGATGCCTTCTGCATTCACTGTTCCAAGTCCTT
CCGCGTCGACGTCTGCGCCCACCACGGCGACCACGCGCGCCTCCGGGACTGCGTGCTCCGCATCGAGAAGCGCGGCTGGA
GGACCTGCGTCAGATGCGCGGGCGACGAGTGGTGGGTGCCCCACATCGGCGTAGCGCTCGGAGATCCGGTGCTCGTGGAC
GAGCAGGGGCGGTACGAGCTTCTCCGGGTGCTGACGCGGGTACGGGGTCCGTGCGTGGAGTGTGGCATCGGCGCCCATCG
GATTCCTCGGGAGTTCTTCCCGTTCTGCTCCGAGACTTGCATCCGTAAACACATTCGCCGCATTGAGGAACGCCAGGAGG
CCAGGCTCGCCGCTCGGCGCTTATAGTGTAATAATCAGGTCAGAGGAGTAGCTTTAATC-----TACTACTACTTGTATC
CAGGTTTATAAGTCAGACATGAGTTTTTATA-------------------------------------------------
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>chr3D_4
---CGGGTCAACAATTTCTTAATGAGTTCTCTTAATCAATTAATTATGCTCGTTAGTTTTGGAGCTTTTTCATTCGATTG
AGATATTCAATTATGAATTTGGTTCATGATTTTGACAAAGTCAATAACTTTTAAATTTAATTGGCAACAATCGGCCTATA
AAAACGTATGCTTCTCACCACCTAGAAAAAGACTAACTCCAATATATGATATGTAGCATCAATAGAGTATATGCATCCAC
CGATGTAGAAAATTCCTCACATAAGTATGCTCCATAATTTTAAGGCTTTACAACCAATTGAGGTTTTTAATTTGGTATTG
GATCATCCAATCCAATTTTAACCGGGTCAACACTTTATCAAGGAGCTTTGTAGTTCAATACACTATGCCCCCTAATTTTT
TATGCCTCACAATCAACTGAGGCAGTATCAAAGCTAGCATCGGATTATGCCGCAAAAAAAGCTAACTTGAGTGATGCACT
CTAGTGATTTTTTATATTTTATAAGAAAGAATTACAAAGGCTATTGTTGCTAGGCCTAGGGCTATAGCCCGAACTGCCCT
AGGCCCGTCTTTGTCACTGCACTGAGGTTTCCAATTTAGAATTGGATCATTCGATTTTGAATGGGTCAACAATTTCTTAA
TGAGTTCTCTTAATCAATTAATTATGCTCGTTAGTTTTGGAGCTTTTTCATTCGATTGAGATATTCAATTATGAATTTGG
TTCATGATTTTGACAAAGTCAATAACTTTTAA-ATTTAATTGGCAACAATCGGCCTATAAAAATGTA---------TGCA
TCATCTCACCACCTA-GAAAAAAAATAACTCCAATATATGATA-TGTAGCATCAATAGAGTATACGCATCCACCGATGTA
GAAAA---TTCCT-CACATAAGTATGTGTTCTTTAGCAAATAATATAGAATCACACCGCAAAA-GGCCCATCAAAAGAC-
TA--TTGTAAA---ATAAAAAGAATATACACTCC-TCATCTCCCACACTCGCCAAACCAAATACTC-----GTTCTAAAA
TATAAGGTGC---ATCTGTTTATTGTAAATCAAATTTGTTTAAGT-T-GACAAAGGTCAGAGCCAAAA--ATATCAACAT
CGACAATAC----TAAAAA----TACAATATTAAAATTTATTCCATGGTGAATCTAATGATAGCGATTTGAAATTATGAA
TATGGACATATTTCTCTACAAATTTGATCAAACTTATTGAGGTTTGACATTTCTAAAGAC---------------T----
--------------------------------------------------------------------------------
------TATATTCTGCATCTTATATATTTTGACGCAAACAGAGTACTCCCTCCATCCATATATATAGGGTCTAATGAATT
TTTCGAGACTGCCTTTGACTATTGATAAGATTAATAGTATATGAGTTGTATAATGTGAAAATTTTATCATTGGAAGCTAC
TTTCATGTACGAATTTGACGGTATGCTTCGTGTAACTTGTGTGTCTTATATTATTACTCTAACATGTAGTTAAAGTTAGC
CTTGAAAAACACATTAGGCCCTGTATATATGGATAGGGGGAGTAACTTTTTTATGAAAATTTAACAACACCAACGGAGGC
GGCAAAAGCGCGTCAACCTGCAGTTCTACTAGAGAAAAGTCCATTTTAAACCTTTAACTTGTAAAGCTTAGTTAAATCAA
ACCCCCTAACTCCGAATCCCTGTCGTTGGCATCCTGAACTTATCAAGCCCGGTCTAAATCGAACCCTGGAGCTGTTTGGT
GCACCGTGAAAGCGTTGATCCCGGGATTTCATCTCTCGGGTCACTTTTGATGGGCCGGCCAGCCTGCAAAATAGCCATTT
TTTTATGAATCTGAAAATATGTGCATGATATTGAAAAA-GTTCAGAAATTAAAAAAATCTTAAATACGAAAAAAGTTCAG
GATATCAATTTTTTTCGCAAATCTAGAAATAAATTCGGAAAT-AAAAATATTCTCAAAATTGGAAAATCTTTTGCAGTTT
GGAAAAATGTTCGCAAATTTGAAAAGGTTTCTTGCATTTGAATTTTTTTGTGAACTCCAAAAGTGTTTTAAAATTAAAAT
CTGTTCATGGATTTGAAAAAAGATCAAGAACTCAAAAAAA--------ATTCCTAAACTCG-AAAATGTTCACAAATTTA
TAAAGTGTTCATGAATTTGAAATAATGTTCATGAGTTTGAAAATCTATTGCAAAGTTGAATAAATATCCACAAACTACAA
ACATGTTCGCAAAGACAAAAAATACTTTTGAGTTTGAATTAGTTTTCATGATTTA-AAAAAACATTCACGAGTTTGAAAG
ATATTCACGATTTTTTTTTTT-AAATATGAAGTTGAAAAATGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGA
AATTGTAAATTAAAAAGAAACATAAAGGGATATAAAATGATAATAGAAATTATAGAAACGGAAAATCAAAAGAGAAAAAC
AAGAGTCACTGGGCATGAGTACGAAAAAAAAAGAATTGCGGAAACCAGCTTAAGTTCGCTATGCAAGTTGGCATGAATAC
AAAAGAAAATCAGTTACTAGGCGGCCCGCACGAGACTAGAGGTGGAAGATAAATATGACAAGTGGGACAAGTCAGTCGGC
ACAAGTAGCAAATTATCCTATTTT---------------TTATGTGAAAAACAACTCCAGGGTATGATTTAGACCAGCAT
TGACAAGTTTATGGTGCCAACGACCGGGATTCCGAGTTGAGGGTTCAATTTAGCTAAGCACGACAAGTTCAAGGTTTAAA
ATAGA-TTTTTTCTGTTCTAATCTACCCCTGCCGAATTGTGAGCGATCGCCCCGGCGTAGTGGCCGCAGATGCAGTCGCT
GGGCCCACGTTAATTTCATCTTGATCCTAACTCGGAACCCTACCTCGTATTGGGCGCGTGACGTGCTAT-----------
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-------------------------------GAGTCTATATATAGCCACCATGATCTGGATGGCCCTGCGAAAACTAGA-
TAAAAAAACTAGCTAGCTAGAAATCGAACCGATCGATGTCTTCGCCGGCTGCTCTGCCCGCAGATGAGATACCCATGGGT
CTGGTGCGCCTCGGAAGGCAACGCCTGCAGTTCGACAAGCACTTCTCCGAGACGTGCCGCCGGGACCGCTTCTGCCTGCG
CTGCGTCGCGGCTTACTGCTCCCACTGCTGCGGCAATCACCACTTTCACCCGGAGTGGCCGGACCTCCGGGTCCTCCCCA
TCGACCTCGACGCCGAAGGCCGGCCCATATTCCCAGCCCGGACGGCGCCGGCGCCGGACGGGCACCCGATCCCGCCGGAC
ATAGCCAAGTTCATGAGGGCGCAGGACTACACCTCGCCGTTGCCAAGGGACGCCTTCTGTATTCACTGTTCCAAGTCCTT
CCGCGCCGACGTCTGCGCCCACCACGGCGACCACGCGCGCCTCCGGGACTGCGTGCTCCGCATCCAGAAGCGCGGCTGGA
GGACCTGCGTCAGGTGCGCGGGCGACGAGTGGTGGGTGCCCCACATCGGCGTGGCGCTCGGAGATCCGGTGCTCGTGGAC
GAGCAGGGGCGGTACGAGCTTCTCCCGGTGCTGACGCGGGTGCGGCGTCCGTGCGTGGAGTGTGGCGTCGGCGCCCATCG
GATTCCACGGGAGTTCTTCCCGTTCTGCTCCGAGACGTGCACCCGCAAACACATTCGCCGCATCCAAGAACGCCGGGAGG
CCAGGCTCGCAGCTTATAGTGTACA--GTAATAATCAGGTCATAGGAGTGGCTTTGATCGTCTCTACTACTACTTGTATC
CAGGTTTATAAGTCGGACATGAGTTTTTATATATCTTTAATTTGACTAGCGACTGAATA---GTACGCCGTAAAGATATA
CAGGAG-----CAAGATGAAATTTCTAAACATACTTCCTCCGACTCTTTCTACTATGCAAGTAAGATTTATCTGAAGTCA
AACTTTATAAGGTTTAATCAACTTTATAAGAAAATACCAACATTCACGATACGA--------------------------
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>chr3A_4
---CGGGTCAACAATTTTTTAATGAGCTCTTTTAATCAATTAATTATGCTCGTTAGTTTTGGAGCTTTTTCATTCGATTG
AGATATTCAATTATGAATTTGGTTCATGATTTTGACAAAGTCAATAACTTTT----------------------------
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-----------------------------TAA-ATTTAATCGGCAGCAATCGGCC-ATAAAAACGTA---------TGCA
TCATCTTACCACCTA-GAAAAAA-ATAACTCCAATATATGATA-TGTAGCATCAATAGAGTATACACATCCACGGATGTA
GAAAA---TTCCT-CACATAAGTATGTGTTCTTTAGCAGATAATATAGAATCACACCGCAAAA-GGCCCACCAAAAGAC-
TA--TTGTAAA---ATAAAAAGAATATACACTCC-TCATCTCCCACACTCGCCAAACGAAGTACTC-----GTTCTAAAA
TATAAGGTGC---ATCTGTTTATTGTAAATCAAATTTGTTTAAGT-T-GACAAAGGTCAGAGTCAAAA--ATATCGACAT
CGGCAATAC----TAAAAA----TACAACATTAAAATTTATTTCATGGTGAATCTAATGATAGCGATTTGATATTATGAA
TATGGACATATTTCTCTACAAATTTGGTCAAACTTATTGAGGTTTGACATTTCTAAA-----------------------
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>chr5B_17
----------------TCTCATTTAATTCTTTT----AATTCATTATGCTCCCTAGTTTTGGAGCTCTCCCATTGGA---
------TTAATTTTAATTTTGGTTCACAATTTTGATCGGGTCAACGA-TTTT----------------------------
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-----------------------------TCA-AATCAATCGGCAGCAATCGACATATAAAAACATATCAATTCCGTGCA
TCCTCTCACCACT----AGAAAAAGAAGCACCAACATGTATAC-TGTAGCATCAACGTAATACATGTGGCCACCGACCTA
GAAAA---TTTTCCCACATAATTATGGGTTGATTAACAAATAACTCAGATTCACACCGCGAAAAGGCCCACCAAAACAC-
TG--CATTATGAATAAAAATAAAAAAAACACTCCATCATCTCCCCAACTTGCCAAACCAAATACTCCATTGGTTCCAAAA
TATAAGGCGT---ATTATTTTTTGTAAAGTCAAATTTCTTTAACT-TTGATCAATTTCAAAGCCAAAA--ATATCGACAT
CCACAATAC----CAA--ATACGTAAAATATGGAAATTTATTTCATGATAAATCTAATGATACTGGTTTGATATTATGGA
TATTGATATATTTCTCTATAAATTTGGTCAAACTTA--------------------------------------------
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>chr7B_18
-----------------CTCATTCAATTCTTT-----AATTCACTATGCTTGTTAACTTTGTACCTTTTCCATCCGATTC
AGGTATTCAATTTTGTATTTGGTTCATGATTTTGACTTGGTCAACGA--TTT----------------------------
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-----------------------------TCA-AATCTATCAGGAGCAACCGGCCTATAAACACACATCAATCCCGCAGA
TCCTCACCACCAAGG----AAAA-GAAGCGTCAAAATGTGACATTGTAGCACCAACATAGTACATGCAGACACCGACGCA
TAATATTTTTTTTCCACATAAATATGAGTGACTTAGCAGATAATACAGAATCACACCGTTAGA-GGCCCACCAAAACAT-
CGCGTTGTAAA---TAAATGTAAAAACACACTCCATCATCTCCCTCACTCGCCAAACCAAACACTATCCCAGTTCCAAAA
TATGAGGTGTGTTATTTATTTTTTTGGAAAGAAAAATATCTAACT-TCGACCAAGGTCAGAGCCAAAA--ATATCAATAT
CCAAAATAC----TAA--A----TAAAATATGAAAATTCATTTCATGATGAATCTAATGATA------------------
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>chr3A_60
---------------------------------------------------------------GCTTTTTCATTCGATTG
AGATATTCAATTATGAATTTGGTTCATGATTTTGACAAAGTCAATAACTTTT----------------------------
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-----------------------------TAA-ATTTAATCGGCAGCAATCGGCCTATAAAAACGCA---------TGCA
TCATCTCACCACCTA-GAAAAAAAATAACTCCAATATATGATA-TGTAGCATCAATAGAGTATACGCATCCACAGATGTA
GAAAA---TTCCT-CACATAAGTATGTGTTCTTTAGCAGATAATATAGAATCACACCGCAAAA-GGCCCACCAAAAGAC-
TA--TTGTAAA---ATAAAAAGAATATACACTCC-TCATCTCCCACACTCGCCAAACCAAATACTC-----GTTCTAAAA
TATAAGGTGC---ATCTGTTTATTGTAAATCAAATTTGTTTAAGT-T-GACAAAGGCCAGGGCCAAAA--ATATCGACAT
CTACAATAC----TAAAAA----TACAATATTAAAATTTATTCCATGGTGAATCTAATGATAGCAATTTGATATTATGAA
TATGGACACATTTCTCTACAAATTTGGTCAAACTTATTGAGATTTGACATTTCTAAATAC---------------TC---
--------------------------------------------------------------------------------
-------ATATTCTACATCTTATATATTTTGACGCAAACAGAGTACTCCCTCCATCCATATATATAGGGTCTAATGATTT
TTTCGAGACTGCCTTTGACTATTGATAAGATTAATAGTATATTAGTTGTATAATGTGAAATTTTTATCATTGGAAGCTAC
TTTCATGTACGAATTTGACAGTATGCTTCGTGTAACTTGTGTGTCTTATATTATTACTCTAATATGTAGTTAAAGTTAGC
CTTGAAAAACACATTAGGCCCTGTATATATGGATAGGGGGAGTAACTTTTTTATGAAAATTTAACAACAGCAACGGAGGC
GGCAAAAGCGCGTCAACCTGCAGTTCTACTCGAGAAAAGTCCATTTTAAACCTTTAGCTTGTAAAGCTTAGTTAAATCAA
A----------------------------------------------CCCGGTCTAAATCGAACCCTGGAGCTGTTT---
---------------TGATCCCGGGATTTCATCTCTCGGATCACTTTTGATGGGCCGTCCAGCCTGCAAAATAGCCATTT
TTTTACGAATCTGAAAATATGTGCATGATATTGAAAAATGTTCAGAAATTAAAAAAATCTTAAATAAGAAAAAAGTTCAG
GATATCAATTTTTTTCGCAAATCTGGAAATAAATTCGGAAATAAAAAATATTCTCAAAATTGGAAAATCTTTTGCAGTTT
GGAAAAATGTTCGCAAATTTGAAAAGGTTTCTTGCATTTGAATTTTTTTGTGAACTCCAAAAGTGTTTTAAAATTAAAAT
CTGTTCATGGATTTGAAAAAAGATCAAGAACTCAAAAAATAAAAAAATATTCCTGAACTCGAAAAATATTCACAAATTTA
TAAAGTGTTCATGAATTTGAAAAAATGTTCATGAGTTTGAAAATCTATTGCAAATTTGAATAAATATCCACAAACTAGAA
ACATGTTTGCAAAGACAAAAAATACTTTTGAGTTTGAATTAGTTTTCATGATTTAAAAAAAACATTCACGAGTTTGAAAG
ACGTTCACGATTTTTTTTAAAAAAATATGAAGTTGAAAAATGTTCAACATATATTTAAGAGAATTGACCCTGTATTGTAA
AATGCTCATTGTATATTCAAATACATCAAAGTAGTAACATTATGTTTGAAAAAATCTGGGAAAAAAATAAATAAGTAAAT
ATATAAATGCCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AAGGA
AATTGTAAATTAAAAATAAACAAAAAGGGATATAAAATGGTAATAGAAATTATAGAAACGGAAAATCAAAAGAGAAAAAC
A--AGTCACTGGGCATGAGTACGAAAAAAAAAGAATTGCGGAAACCAGCTTAAGTTCGCTATGCAAGTTGGCATGAATAC
AAAAGAAAATCAGTTACTAGGCGGCCCGCACGAGACTAGAGGTGGAAGATAAATATGACAAGTGAGTCAAGTCAGTCGGT
ACAAGTAGCAAAATATCCCATTTTGGGATATATATTTTTTTATGTGAAAAACAACTCCAGAGTTTGATTTAGACCAGCAT
TGATAAGTTTATGGTGCCAACAACCGGGATTCTGAGTTGAGGGTTCAATTTAGCTAAGCACTACAAGTTCAAGGTTTAAA
ATAGATTTTTTTCTGTTCTAATCTACACCTGCCGAATTGTGAGCGATCGCCCCGGCGTAGTGGCGGCAGATGCAATCGCT
GGGCCCATGTTAATTTCATCTTGAT----ACTCGGAACCCTATCTCGTATTGGGCGCGTGACGTGCTATGGGTTTATGGT
CCTGTTTGGATACTCTAACACAGTTAGAGTTAGAGTTATTTTCTAACCCACTCTAACCCAAATAAGCATCTCTCCACCGG
GATAGTTGGGTTAAATGGAACTAACCCACTCTAACTCTTCATGTTTGGATACTTTTGAGTTATTTGAGCCTCCAACTAAC
CCAAACTAATTCTAACCCCATAATCCAAACAGGGCCTATATATAGCCACCATGATCTGAATGGCCCTGCGAAAACTAGAT
TAAAAAAACTAGCTAGCTAGAAATCGAACCGATCGATGTCTTCGCCGGCTGCTCTGTCGGCAGATGAGATACCCATGGGT
CTGGTGCGCCTCGAAAGGCAACGCCTGCAGTTCGACAACCACTTCTCCGTGACGTGCCGCCGGGACCGCTTCTGCCTGCG
CTGCGTCGTGGCTTTCTGCTCCCACTGCTGCGGCAATCACCACTTCCACCCGGAGTGGCCGGACCTCCGGGTCCTCCCCA
TCGACCTTGACACCGAAGGCCGGCCCATATTCCCAACCCGGATGGCGGCGGCACCGGACGGGCACCCGATCCCGCCGGAC
ATAGCCAAGTTCATGAGGGCGCAGGATTACACCTCGCCGTTGCTAAGGGACGTCTTCTGCATTCACTGTGCCAAGTCCTT
CCGCGCCGACGTCTGCGCCCACCACGGCGACCACGCGCGCCTCCGGGACTGCGTGCTCCGCATCGAGAAGCGCGGCTGGA
GGACCTGCGTCAGGTGCGTCGGCGACGAGTGGTGGGTGCCGCACATCGGCTTAGCGCTCGGAGATCCGGTGCTCGTGGAC
GAGCAGGGGAGGTACGAGCTTCTCCCCGTGCTGACACGGGTGCGGCGTCCGTGCGTGGAGTGTGGCATCGGCGCCCATCG
GATTCCACGGGAGTTCTTCCCGTTCTGCTCCGAGGCTTGCACCTGCAAACACATTCGCTGCATCGAAGAACGCCGGGAGG
CCAGGCTCGCTGCTCGGCGCTTGGCCACCG----TCAGGCCAGAGGAGTAGGTTTAATCGTTT---CTACTACCTGTATC
CAGGTTTATAAGTCACACATGAGTTTT--TATATCTTTAATTTGACTAGCGACAAATGTTAT------------------
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>chr5A_84
CAATT---------------------------------------------------------------------------
-------------TGAAATTGGTTCACAC-TTTGACCAGGTCAATAA-TTTT----------------------------
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-----------------------------TCA-AATCAATCGGCAAGAACCACCCTGTAAAA-CATATCATTCTCGCGCA
CCCTCTCATCGCCTA-GAAAAAA-GAAGCACCAACATTTGATACCGTAGAACCAATATAATACATGCAGCCACCAACGTA
GAAAA---TCTCTCCACATAAATATACGTTGATTAGAAGATAATACAAAATCACACCACGAAA-GGCCCATTAAAATAT-
CA--GATTATA---GAAAATAGAAAACACACTCCATCGTCTTCCC-ACTTCCCAAACCAAATATTCCACCGGTTCCAAAA
TATAAAGTGT---AGTAGTTTTTAAAAAGATAAATTTCATGAACT-TTGACCAAGTTTAGAGCAAAAA--ATATCGACAT
CCATAATACTAATTAA--A----TAAAGTATGAAAATTCATTTCATAATGAATCTGATGCTACCAATTTGATATTATGGA
TATTGATATATTTCTCTATAAATTTGGTCAAACTTACATAGGTTTGACTTTTCAAAAAAC---------------TAA--
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>SNPs
---------------------------------------------------S-----------------------S----
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----------------------------------------S-----------------------------S---------
---------------S----------------------------------------------------------------
----------------S---------------------------------------------------------------
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-----S--------------------------------------------S--S------SSSSSSSSSSSSSSS-----
--------S------S--S--SSS------------SSS----S-S-----SSS--S-SS---S------S---------
-------------------------------------------------S----------------------------S-
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----------------SS-----------------------------------------S--------------------
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----------------------SS-----S--S-----------------S-----------------------------
----SS--------------------------------------------------------------------------
--------------------------------------------------------------S-------S--------S
S-------------------------------------------------------------------------------
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---S----S--------------S--------------------------S---------------------S-------
--------------------------S-------------------------------S---------------------
---------S----------------------------------------------------------------------
------------------------------S-----------------------------------------------SS
-------S-----------------S-----S-----------------S--S-S--------------S----S---SS
SS-SSSSSSSS---------S-------------------S-SS----------S-S---S-------------------
-----S---SS-----------------SS------S---------S-------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_816
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----------------------------------------------------------------------------CGCA
CTCTCTCACCACCTAG----------------------------------------------------------------
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>reverse_4686
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---------------------------------------------GATGGCTACTCCTCCGATGC---------------
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