>input_sequence_71011
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---------------------------------------ATGTGCACAGTGGAGAAGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGTGAGCACCGACTCAGCCCATCCCTCATCTCGGCCCTCCGCACAGCCGTGGCCACCGTCCGCGCCT
CCCCCGGTGCCGGTGCCCTCGTGCTGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAAGCCTGGGCGCGCACG
GTCCCGCCCCACCTCCACGACTCCATGAGAGGAGCCTTCCGCGCCCTCGTGGCCGACCTCCTCGCGCTGCCCATGCCCAC
CGTGGCCGCCGTCACGGGCCACGCAGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCGTCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGTCGGCCTCAAGTTCGCCGACTACTTCGGGGAGCTACTCCGGCAGAAG
GTCCCCAACGCAGCGGCCAGGAGGGACATGGTCCTCGGGGGGAAGAAGATGACGGCGGCTGAGGCGGTGCGGCTGGGCAT
CGTGGACGCGGCCGCGGACGGCGGCGTCGAAGACGTGGTGGCCGCGGGCGTCGCGGCAGCCGAGGTGCTCGCGACGAGGG
GTTGGGACGGGGAGATCGTGGCCGAGATCCGGAAGGCGATGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACCACGGCGCC
GA---GGCAGCGGCAGCGCGGCCGCGTCTGTAG-----------------------------------------------
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>chr3B_1_TraesCS3B01G154300
GTCATGTGTGTGGTCTTGAAGTGGAGAGCTCCTTCTATGCTTTAATTACATGCGGCCATGCAAGGGCAAATT-AGCAGGG
CATGCGTGAGTTCTGGCCGCTACTGGCGACGGACCTACTGATAGACAATGGCAAGGA----TTGTTACATGTTTTATCTG
GATGTTCTCATCAAGTTCGTGACATGGTTATTTTGCTTATTTGGCGTATTTGGAGTCCCAGGTCAGATATAGCACATGGC
AAGGTAGTTCCTCAGTTGGAAATAAGTATTGATTTCTTGGTCAGTTATCTGAAGTCCCTAGATCTTGCTCGGAGATATAG
CACTGAAGAGATTATCAAAGGTAAAATGATCCTGTTGGAGGTCCAGACTCCGAAACCTATGGGTAGTGGCCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCAACCCTCTCGGTGGATGGTTCTTTTTCTGTTCATGATGGCTCCGCTGTGA
CTGGTATGGTGGTACTACGTCATAACGGTTCGGCCATCTTTGCTGCTTATAGGGTTTTATTCAGATGCAATTATGCTCTT
GAAGCTGAGATTCATGCGCTTATGCAAGATATGGCTTTAGCTCTCCAACACACAGAACTGCAAGTCATCGTCCAGTCGGA
TTCAATCGAGGCTCTATCCATCTTATCAAATAAGAATCTCTCACAATCAGCTTATGGGCAATTGGTAGCTGAGAGCAAGG
CCCTCATGGG---------------------------------------------------------------TAATTAC
AGCCGTACTGAATGGTGTACTGCTATTTGGTTTCACAGAGGCCCTTCGTGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TTCTATAATTTTGGAATAAAACTCATCTTTGTCGGAAAAAAAAAGATTCCCTTAATCATCTCTCGGAGCTACGTTGCGGC
TTTCCACGTGAAATGGACTGGCACAAATCATATTTTAGGCATGATAAATAACAGAACCGGGAAGATAAACCCTCCATCAC
CTCGCGATCCCCAGATCCC---------ACACGGGAAAAATGTGCACAGTGGAGAAGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGTGAGCACCGACTCAGCCCATCCCTCATCTCGGCCCTCCGCACAGCCGTGGCCACCGTCCGCGCCT
CCCCCGGTGCCGGTGCCCTCGTGCTGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAAGCCTGGGCGCGCACG
GTCCCGCCCCACCTCCACGACTCCATGAGAGGAGCCTTCCGCGCCCTCGTGGCCGACCTCCTCGCGCTGCCCATGCCCAC
CGTGGCCGCCGTCACGGGCCACGCAGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCGTCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGTCGGCCTCAAGTTCGCCGACTACTTCGGGGAGCTACTCCGGCAGAAG
GTCCCCAACGCAGCGGCCAGGAGGGACATGGTCCTCGGGGGGAAGAAGATGACGGCGGCTGAGGCGGTGCGGCTGGGCAT
CGTGGACGCGGCCGCGGACGGCGGCGTCGAAGACGTGGTGGCCGCGGGCGTCGCGGCAGCCGAGGTGCTCGCGACGAGGG
GTTGGGACGGGGAGATCGTGGCCGAGATCCGGAAGGCGATGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACCACGGCGCC
GA---GGCAGCGGCAGCGCGGCCGCGTCTGTAGGCTCCGGTATATCGTACGAGGCCACTCCTTGTGCTCGAGCATTCGCG
TAGCCTGAAGAATT-GCTCTGGATCCACGGCATGCCGTGGATCTGGGAACTTCAGCTGAGAACAGAGTAATGTTCAGGAA
CTGCTCGAACAGAATCGTGTCGCCAAGAAGATCCG---CACCGGCGACATGTGATGAGCGCACCGTGCTGGTGGTTTTCC
TTGTACTCCTA----------TTGATCTTCGCATCGGGTTTCATTGAC---------TGTTGTTACTCTGACGGAAGCTC
GTTGCTGATAGACTTCTGAACTTCTGAAGCATGACTGAATGAAGAGATGAAGATGAACTGCTTTCGCGTATATGGGCAGG
GCACTCGTGTTTTTCATTAACCATGGTGCACAGCATTGTCGTTGGCCACCAGATCGGGTAGGAAGTCCGGGGTGAGGTGC
TACTCCCTCCGTTTCACAAATATAAGATGTTTTGAATATTTTAATATAGATATATACGGACCAATTGGATGAACAAATAT
ATTAAAACACGTCTATGTACATCTGATTTACAAAAATGTTACAAATCTTGTATTAGTGAGGGGAGGGAGTATTCCCTAAG
ACAATTATTTGCCTTAAATCGTCCTGCTAATGCCACGAACAAATTTGTTTTTAAACAATGGCATAAGTTTTGGTTCATCC
ATTCATCAAGAAGAATAGAGCTTGTTTACACAGTAACATAATTTAAAAGAGGTTGTTACTCTCCCGCTAGTATTGAACGC
AAGCTCTTTGCCCCACGATCACCCGGTTTCATTCTTGATGACGATGCCAAGAAAAAATGGCGGCGGTGTAGACTTGTGAC
AAAAACCCATGCGTTCTTTCCATTCCAAATAGTCCAACTAACAAGGATGACATGGAAAGTCATGGCTTTTTCTATTTGGG
ACGTGCAAGACGGACAGGTTGAGCCATCATTCCTTGTTAGAATGCTCCAAACTCTACGTCGAAGTGCCTATGCTCTCTAT
TTGAAGCCACTCCTTA
>chr3D_1
GTCCTGTGTGTGGCCTTGAGGTGGAGAGTTCCTTCCATGCTTTAATTACATGCGGCCATGCAAGGGCCCTTT-GGGAGGC
CATGCGTGAGTTCTGGCCGCTACCGGCGACGGACCAACTGATAGACAATGGCGAGGAGTGGCTGTTACATGTTTTATCTG
GATGTTCTGATCAAGTTCGTGACATGGTTATTTTGCTTATTTGACGTATTTGGAGTCTCAGGTCAGATATAGCACATGGC
AAGGTAGTTCCTCCGTTGGAAATAAGTGTTGATTTCTTGGTCAGTTATCTAAAGTCCTTAGATCTTGCTCGGAGATATAG
CAGTGAAGAGATTATCAAAGGTAAAATGACCCTGTTGGAGGTCCTGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCGCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCCGCTGCGA
CTGGTATGGTGCTACGACGTCATGACGGTTCGGTTATCTTTGCTGCTTATAGGGTTTTATTCAGATGCAATGATGCTCTT
GAAGCAGAGATCCATGTGCTTATGCAAGGCATGGCTTTAGCTCTCCAACACACAGAACTGCAAGTGATCGTCCAGTCAGA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTCTCACGTTCAGCTTATGGGCACTTGGTAGCTGAGATCAAGG
CCCTGATGGAGGAGAGGGAGTTTATTCCCCAGAAGATTTGTAGGGATCAAAATAGGATAGCAGATTGTCTGGCTAATTTC
AGCCGTACAAAATCGTGTACTGCTGTTTGGCTTCAGAGAGGCCCTCCATGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TCCTATAATTTTGGAATAAAACTCCTCTTTGCCAAAAAAAAAG-------------------------------------
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>chr3A_1
GTCCTGTGTGTGGCCTTGAAGTGGAGAGCTCCTTTCATGCTTTAATTACACGTGGCCATGCAAGGGCCCTTT-GGGAGGC
CATGCATGAGTTCTGACCGCTACCGGCGACGGACCAATTGATAGACAATGGCAAGGAGTGGCTGTTACATGTTTTATCTG
GATGTTCTGATCAAGTTCGTGATATGGTTATTTTGCTTATTTGACGTATTTGGAGTCTCAGGTCAGATATAGCACATTGC
AAGGTAGTTTCTCCATTGGAAATAAGTGTTGATTTCTTGATCAGTTATCTAAAGTTTCTAGATCTTGCTTGGA-ATATAG
CACTGAAGAGATTTTAAAAGATAAAATGACCCTGTTGGAGGTCCGGACTCCAGAACCTATGGGTAGCGGGCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCGCTTTCGGTAGATGGTTCTTTTTCTGTTCATAATGACTCCGCAGCGA
CTGATATGGTGCTACGACGTCATGACGGTTC-------------------------------------------------
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>chr6D_1
GTCGTGTGTGTGGTCTTGAAGTGGAGAGCTCCTTTCATGCTTTAATTACATGCGGCCATGCAAGGGCCATTT-GGGAGAC
CATGCATTAGTTCTGGCCGCTACCGGCGACGGAACAACTGATAGACAATGGCAAGGAGTGGTTGTTATATGTTTTATCTG
GATGTTTCGATCAAGTTCATGACATGGCTATTTTGCTTATTTGGCGTATTTAGAATCTCAGGTTAGATATAACACATGGC
AAGGTAGTTCCTCCGTTGGAAATAAGTGTTGATTTCTTGGTCAGTTATCTGAAGTCCCTAGATCTTGCTTGGAGATATAC
CACTGAAGAGATTATCAAAGGTAAAATGACCTCGTTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCCCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCCACTGCGA
CTAGTATGGTGCTACGACGTCATGACGGTTCGGTCATCTTTGCTGCTTATAGGGTTTTATTCAGATGCAATGATGCTCTT
GAAGCGGAGATCCATGCGCTTATGCAAGGCATGGATTTAGCTCTCCAACACACAGACCTGCAAGTCATTGTCCACTCAGA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTCTCACGGTCGACTTATGGGCACTTGGTAGCTGAGATCAAGG
CCCTGATGGAGGAGAGGGAGTTTATTCCCCAGAAGATTTGTAGGTATTAAAATAAGGTAGTAGATTGTCTGGCTAATTAC
AGCCGTACATAATCTTGTACTGCTGTTTGGCTTCAGAGAGGCCCC-CGTGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TCCTATAATTTTGGAATAAAACTCATCTTTGCTGAAA-------------------------------------------
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>chr7D_1
GTCCTGCGTGTGGCCTTGAAGTGGAGAGCTCCTTCCATGCTTTAATTACATGCGGCCATGCAAGGGCCCTTT-GGGAGGC
CATGCGTGAGTTCTGGCTGCTACCGGCAACGCACCAACTGATAGACAATGGCAAGGAGTGGCTGTTACATGTTCTATCTG
GATGTTCTGATCAAGTTCGTGACATGGTTATTTTACTTATTTGGCGTATTTGGAGTCTCAGGTCAGATATAGCACATGGC
AAGGTAGTTCCTCCATTGGAAATAAGTGTTGATTTCTTTGTCAGTTATCTAAAATCCCTAGATCTTGCTCGGAGATATAG
CACCGAAGAGATTATCAAAGGTAAAATGACCCTGTTGGAGGTCCGGACTCCGGAACCTATCGGTAGCGGACA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCACTCTCGGTGGATGGTTCTTTTTTTGTTCATGATGGCTCCGTAGCGA
CTGGTATGGTGGTACGACGTCATGACGGTTCG-TCATCTTTGCTG-----AGGGTTTTATTCAGATGCAATGATGCTCTA
GAAGCGGAGATCCATGCGCTTATGCAAGGCATAGCTTTAGCTCTCCAACACACAGAACTGCAAGTGATCGTCCAGTCAAA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTCTCACGTTCAGCTTATGGGCACTTGATAGCTGAGATCAAGG
CCCTGATGGAGGAGAGGGAGTTTATTCCCCAGAAGATTTATAGGGATCAAAATAGGGTAGCAGATTGTCTGGCTAATTAT
AGCAGTACAAAATCATGCACTGCTGTTTGGCTTCAGAGAGGCCCTTCATGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TCCTATAATTTTGGAATAAAACTCCTCTTTGCCGAAAAAAAAAA------------------------------------
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>chr2A_1
GTCCTGTGTGTGGCCTTGAGGTGGAGAGTTCCTTCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC-TT-GGGAGGC
TATGCGTGAGTTCTGGCCACTACCGACGACAGACCAACTGATAGACAATGGCGAGGAGTGGCTGTTACACGTTTTATCTG
GATGTTCTGATCAAGTTCATGACATGGTTATTTTGCTTATTTGGCGTATTTGGAGTCTCAAGTCAGATATAACACATGGC
AAGGTAGTTCCTCCGTTGGAAATAAGTGTTGATTTCTTGGTCAGTTATCTAAAGTCTTTAGATCTTGCTCAGAGATATAG
CACTGAAGAGATTATCAAAGGTAAAATGACCCTATTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGTGCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCGGCTGCGA
TTGGTATGGTGCTACGACGTCGTGACGGTTCGGTCATCTTTGCTGCTTATAGGGTTTTATTCAGGTGCAATAATGCTCTT
GAAGTAGAGATCCATGCGCTTATGCAAGGCATGGCTTTAGCTCTCCAACACACAAAACTGTAAGTGATTGTCCAGTCAGA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTTTCATGTTCAGCTTATGGGCACTTGGTAGCTGAGATCAAGG
CCCTGATGGAGGAGAGGGAGTTTATTCCCCAGAAGATTTGTAGGGATCAAAATAGGATAGCAGATTGTCTGGCTAATTAC
AGCCGTACAGAATCGTGTATTGCTGTTTGGCTTCAGAGAGGCCTTTCATGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TCCTATAATTTTGGAACAAAACTCCTCTTTGCCGCAAAAAAAA-------------------------------------
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>chr7B_1
GTCATCCGTGTGGCCTTGAAGTGGAGAGCTCCTTCCATGCTTTGATTACATGCGGCCATGCAAGGGCCC-TTTGG-AGGC
CATGCATGAGTTCTGGCCGCTTCCGGTAACGGACCAACTGATAGACAAAGGCAAAGAGTGGTTGTTACATATTTTATCTG
GATGTTCTGAACAAGTTTGTGACATGGTTATTTTGCTTATTTGGCGCATTTGGAGTCTCAGGTCAGATATAGCACATGGC
AAGGTAGTTCCTCCGTTCGAAATAAGTGTTGATTTATTGGTCAGTTATCTAAAGTCCCTAGATCTTGTTCGGAGATATAG
CACTGAAGAGATTATCAAAGGTAAAATGACCCTGTTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGT
GACATGGCCTCCTCCTTCAGTGGGCCAGGCGGCGCTCTTGGTGTATGGTTCATGTA-TGTTCATGATGGCTCCGCTGCGA
CTGGTATGGTGCTACGACGTCATGACGGTTCGGTCATCTTTGCTGCTTATAGGGTTTTATTCAGATGCAATGACGCTCTT
GAAGCGGAGATCCATGCGCTTATGCAAGGCATGTCTTTAGCTTTCCAACACACATAACTGCAAGTGATCATCCAGTCAGA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTCTCAAGTTCAGCTTATGGGCACTTGGTATCTGAGTTCAAGG
CCCTGATGGAGGAGAGGGAGTTTATTCCCCAGAAGGTTTGTAGGGATCAAAATAGGGTAGCAGATTGTCTGGCTAATTAC
AGCCGTACAGAATCATGTACTGCTATTTGGCTTCAGAGAGGCCCTCTGTGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TACTATAATTTTGGAATAAAACTCCTCTTTGCCGCAAAAAAAA-------------------------------------
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>chr4B_1
GTCTTGTGTGTGGCCTTGAAGTGGCGAGCTCCTTCCATGCTTTAATTACATGCGACCATGCCAGGGCCC-TTTGGGAGGC
CATGCGTGAGTTCTGGCCGCTACCGGTGATGGACCAACTGATAGACAATAGCAAGGAGTGGTTGTTACATGTTTTATCTG
GATGTTCTGATCAAGTTCGTCACATGGTTATTTTGCTTATTTGGCGTATTTGGAGTCTCCGGTCAGATATAACACATGGC
AAGGTAGC-TCTCCATTGGAAATAAGTGTTGATTTCTTGGCCAGTTATCTAAAGTCCCTAGATCTTGCTCGGAGATATAG
CACTGAAGATATCATCAAAGGTAAAATGACCTTGCTGGAGGTCCGGACTCCGAAACCTATGGGTAGCGGCTAGTGTGTGC
GCCATGGCCTCCTCCTCCACTGGGCCAGGCGACGCTCTTGATGGATGGTTCCTTTTCTGTTCAGGATGGCTCCGCTACGA
CTGGTATGGTGCTACAACGTCATGACGGTTCGGTCATCTTTGCTGCTTATAGGGTTTTATTTAGATGCAATGATGCTCTT
GAAGCGAAGATCCATGCGCTTATGCAAGGCATGGATTTAGCTCTCCAACACACAAAACAACAAGTCATCGTCGAGTCAGA
TTCCATTGAGGCTCTGTCCATCTTATCAAATGAGAATCTCTCATGGTCAGCTTATGGGCACTTGGTAGTTGAGATCAAGG
CCCTGATGGG----------------------------------------------------------------------
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>chr5A_1
GTCCTGTGTGTGGCCTTAAGGTGGAGAGTTCCTTCCATGCTTTAATTACATGCGGCCATGCAAGGGCCC-TTTGGGAGGC
TATGCGTGAGTTCTGGCCGCTACCGGCGACAGACCAACTGATAGACAATGGTGAGGAGTGGTTGTTACATGTTTTATCTG
GATGTTCTTATCAAGTTTGTGACATGGTTATTTTGCTTATTTGGCGTATTTGGAGTCTCAGGTCAGATATAGCACATGGC
AAGATAGTTCCTCTGTTGGAAATAAGTGT--------------GTTATCTGAAGTCCTTAGATCTTGCTCGGAGATATAG
CACTGAAGAAATTATCAAAGGTAAAATGACCCTATTGGAGGTCCGGACTCCGGAACCTATGGGTAGCGGCCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCGCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCGGCTGCGA
CTGGTATGGTGCTACGACGTCATGACGGTTTGGTCATCTTTGCTGCTTATAGAGTTTTATTCAGATGCAATGATGCTCTT
GAAGCTGAGATCCATGCGCTTATGCAAGGCATGACTTTAGCTCTCCAACACACAAAACTGCAAGTGATCGTCCAGTCAGA
TTCAATTGAGGCTCTGTCCATCTTATCAAATGAAAATCTCTCACGTTCAGCTTATGTGCACTTGGTAACTGAGATGAAGG
CCCCGATGGAGGAGAGGGAGTTTATTCCCCAGAAGATTTATAGGGGTCAAAATAGGATAGCAGATTGTCTGGCTAATTAC
AGTCGTACAGAATCGTGTACTGCTGTTTGGCTTTAGAGAGGCCCTCCATGTATCGAGGATCTCTTGCCAGTAGATTGTAA
TCCTATAATTTTGGAATAAAACTCCTCTTTGCCGCCAAAAAAAAGA----------------------------------
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>chr2D_29
----------------------------CTCCTTCCATGCTTTAATTACACGCGGCCATGCAAGGGCCC-TTTGGGAGGC
CATGCGTGAGTTCTGGACGCTACCGGCGACGGACCAACTGATAGACAATGGCAAGGAGTGGCTGTTACATGTTTTATCTG
AATGTTCCGATCAAGTTCGTGACATGGTTATTTTGCTTATTTGGCGTATTTGGAGTCTCAGGTCAGATATAGCACATGGC
AAGGTAGTTCCTCCATTGGAAATAAGTGTTGATTTATTGGTCAGTTATTTAAAGTCCCTAGATCTTGCTCGGAGATATAG
CACTGAAGAGATTATCAAAGGTAAAATGACCCTGTTGGAGATCCGGACTCCGGAACCTATGGGTAGCGGGCA--GTGTGT
GCCATGGCCTCCTCCTCCAGTGGGCCAGGCGGCGCTCTCGGTGGATGGTTCCTTTTCTGTTCATGATGGCTCCGCAGCGA
CTGGTATGGTGCTACGACGTCATGACGGTTCGGTCATCTTTGTTGCTTATAGGGTTTTATTCAGATGCAATGATGCTCTA
GAAGCGGAGATCCATGCGCTTATGCAAGGCATGGCTTTAGCTCTCCAACACATAGAACTGCAAGTGATTGTCCAGTCAGA
TTCAATAGAGGCTCTGTCCATCTTATCAAATGAGATTCTCTCACGTTCAGCTTATGGGCACTAGGTAGCTGAGATCAAGG
CCCTGATGG-----------------------------------------------------------------------
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>chr3A_956
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-----------------------------------------------------------------TAAACGGTCCATCAC
CTCGCGATCCCCAAATCCCCGAAAATGGACAATCGAAACATGTGCACAGTGGAGAAGCGCGGGCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGCGAGCACCGCCTCGGCCCATCCCTCATCTCGGCCCTCCGCTCCGCCGTGGCCACCGTCCGCGCCT
CCCCCGGTGCCGGCGCCCTCGTGCTGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAAGCCTGGGCGAGCACG
GTCCCGCCCCACCTCCACGCCTCCATGAGAGGGGCCTTCCGCGCCCTCGTGGCCGACCTCCTCGCGCTGCCCATGCCCAC
CGTGGCCGCCGTCACGGGCCACGCCGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCGTCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGTCGGCCTCAAGTTCGCGGACTACTTCGCGGAGCTGCTCCGGCAGAAG
GTCCCCGACGGAGCGGCCAGGAGGGACATGGTCCTCGGGGGGAACAAGATGACGGCGGCGGAGGCGCTGCGGCTGGGCAT
CGTGGACGCGGCCGCGGACGGCGGCGTCGAAGACGTGGTGACCGCGGGCGTCGCGGCGGCCGAGGGGCTCGCGGCCAGGG
GGTGGGACGGGGAGGTCGTGGCCGAGATCAGGAAGGCGATGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACCACGGCGCC
GA---GGCGGCGGTAGCGCGGCCGCGGCTGTAGGCTCCGGTGTACCGTACGAGGCCACTCCT------------------
---CCTGAAGAACTGGCTCTGAATCCACATCGAGCCGTAGATCTACGAACTTCAGCTGGGAACAGAGCAATGTTCAGGAA
CTGCTCGAACAGAATCGTCCGGCCAAGAAGATCGCAGCCACCGGCGACAT--------------GTGCTGGTGGTTTTCC
TTGTGCTCTGCCCGACGCTCTTTGATCTTCGATTCCGGTTTCATTGCGTGTGGCGTATGCTGTCGCTCTGACCGAAGCTC
TCTGCTGATAGA---CTGAACTTATGAAGCATGGCTGCATGAAC-------GATGAA-----------------------
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>chr3D_962
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-----------------------------------------------------------------------CTCGATCAC
CTCGCGATCCCCAAATCCCCGAA--TGGACAAGCGAACCATGTGCACAGTGGAGAAGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGCGAGCACCGACTCAGCCCATCCCTCATCTCGGCCCTCCGCTCCGCCTTGGCCACCGTCCGCGCCT
CACCCAGTGCCGGTGCCCTCGTGCTGGCCGCGGAGGGCAAGTACTTCTCCAACGGCTTCGACCAGGCCTGGGCGCGCACG
GTCCCGCCCCACCTCCACGACTCCATGAGAGGAGCCTTCCGCGCCCTCGTGGCCGACCTCCTCGCGCTGCCCATGCCCAG
CGTGGCCGCCGTCACGGGCCACGCCGCCGCCGCCGGGTGCGCGCTGGCCCTCGCGCACGACTCCGTCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGTCGGCCTCAAGTTCGCCGACTACTTCGGGGAGCTGCTCCGGCAGAAG
GTCCCCGACGCAGCGGCCAGGAGGGACATGGTCCTCGGGGGGAACAAGATGACGGCGGCGGAGGCGGTGCGGCTGGGCAT
CGTGGACGCGGCCGCGGACGGCGGCGTCGAAGACGTGGTGGCCGCGGCCGTCGCGGCGGCCGAGGGGCTCGCGGCGAGGG
GGTGGGACGGGGAGGTCGTGGCCGAGATCAGGAAGGCGATGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACCACCCC---
---------GCGGCGGCGCGGCCGCGGCTGTAGGCTCCGGTATATCGTACGAGGCCACTCCT------------------
---CCCCAAGAATTGGCTCTGAATCCACAGCAAGCCGTAGATCTGTGAACTTCAGCTGGGAACAGAGTAATGTTCAGGAA
CTGCTCGAACAGAATCGTCTGGCCAAGAAGAT-CG---CACCGGCGACAT--------------GTGCCGGTGGTTTTCC
TTGTGCTCTGACAGAAGCTCTTTGATCTTCGATTACGGTTTCACTGCATGTGGCGTATGCTGTTGCTCTGACCGAAGCTC
TTTGCTGTTAGA---CTGAACTTGTGAAGCATGACTGCATGAAC-------GATGAACCGCTTTCGCGTATATGGTGCA-
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>chr3B_990
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----------------------------ACACGGCAAACATGTGCACCGTGGAGAGGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGCGAGCACCGCCTCAGCCCAGCCCTCATCTCCGCCATCCGCGCCGCCGTGGC---------CGCCT
CCCCCGGCGCCGGCGCCCTAGTCATGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAGGCCTGGGCGCGCACG
GTCCCACCCCACCTCCACACCACCATGAGCGAGGGCTTCCGGGGCCTCGTCGCCGACCTGCTCGCGCTCCCCATGCCCAC
CGTGGCCGCGGTCACAGGCCACGCCGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCACCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGCCGGCATCAAGATCGTCGACTACTTCGGGGAGCTGCTCCGGCAGAAG
GTCCCCGACGCCGCGACCAGGCGGGACATGCTCCTCAGGGGGGACAAGATGACGGCCACGGAGGCGGTGCGGCGGGGCGT
GGTGGACGCGGCCGCGGATGGCGGCGTCGACGACGTGGTGGCTGCGGCCGTCGCGGCGGCCGAGGGGCTCGCGGCGAGGG
GGTGGGACGGGGAGGTCGTGGCCGAGATCAGGAAGGCCGTGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACTACGGGACC
GAGGCGGCAGCGGCGGCGCGGCCGCGGCTGTAGGCTCC------------------------------------------
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>chr3D_990
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----------------------------ACACGGCAAACATGTGCACCGTGGAGAGGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGCGAGCACCGCCTCAGCCCAGCCCTCATCTCCGCCATCCGCGCCGCCGTGGC---------CGCCT
GCCCCGGCGCCGGCGCCCTCGTCCTGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAGGCCTGGGCGCGCACG
GTCCCGCCCCACCTCCACACCACCATGAGCGAGGGCTTCCGGGGCCTCGTCGCCGACCTGCTCGCGCTCCCCATGCCCAC
CGTGGCCGCCGTCACGGGCCACGCCGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCGTCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGCCGGCATCAAGATCGTCGACTACTTCGGGGAGCTGCTCCGGCAGAAG
GTCCCCGACGCCGCGACCAGGCGGGACATGCTCCTCAGGGGGGACAAGATGACGGCCGCGGAGGCGGTGCGGCGGGGCGT
GGTGGACGCGGCCGCGGACGGCGGCGTCGAGGACGTGGTGGCCGCGGCCGTCGCGGCGGCCGAGGGGCTCGCGGCGAGGG
GGTGGGACGGGGAGGTCGTGGCCGAGATCAGGAAGGCCATGTGGCCCGCCGTGTGGGGCAAGGTCAAGGACTACGGCGCC
GA---CGCGGTGGCGGCGCGGCCGCGGCTGTAGGCTCC------------------------------------------
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>chr3A_990
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----------------------------ACACGGCAAGCATGTGCACCGTGGAGAGGCGCGGCCGCGTCCACCTCATCAC
CCTCACCGGCGCCGGCGAGCACCGCCTCGGCCCAGCCCTCATCTCGGCCATCCGCGCCGCCGTGGC---------CGCCT
CCCCCGGCGCCGGCGCCCTCGTCCTGGCCGCCGAGGGCAAGTACTTCTCCAACGGCTTCGACCAGGCCTGGGCGCGCACG
GTCCCGCCCCACCTCCACACCGCCATGAGCGAGGCCTTCCGGGGCCTCGTCGCCGACCTGCTCGCGCTCCCCATGCCCAC
CGTGGCCGCCGTCACGGGCCACGCCGCCGCCGCCGGCTGCGCGCTGGCCCTCGCGCACGACTCCGCCGTCATGCGCGCCT
CCCGCGGGTTCCTGTACATGAGCGAGGTCGACGCCGGCATCAAGATCGTCGACTACTTCGCGGAGCTGCTCCTGCAGAAG
GTCTCCGACGCCGCGGCCAGGCGGGACATGCTCCTCCGGGGGGACAAGATGACGGCCGCGGAGGCGGTGCGGCGGGGCCT
GGTGGACGCGGCCGCGGACGGCGGCGTCGACGACGTGGTGGCCGCGGCCGTCGCGGCGGCCGAGGGGCTCGCGGCCAGGG
GGTGGGACGGGGAGGTCGTGGCCGAGATCAGGAAGGCCATGTGGCCCGCCGTGTGGGCCAAGGTCAAGGACTACGGCGCC
GA---CGCGGCGGCGCCCCGGCCGCGGCTGTAGGCT--------------------------------------------
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>SNPs
-----------------------------------S-------------------------------S-S---S-S---S
-----------------------S-----------S--------------------------------------------
--------S------------------------------------------------S----------------------
-------------S-------------S----------------------------------------------------
-----------------------------S--------------S---------------------S-------------
------------------------------S----------------------------------------------S--
---------------S-------S---------S-------------------------------------S--------
-----------S----------------SS-----------------------------------------------S--
------S--------S---------------S------------SS--------------S-------------S-----
----S---------------------------------------------------------------------------
--------S----S----------------S----S--------------------------------------------
-S-----------------------------S--S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---------
-------------S------------------------S-----------------------------------------
---------------S---------------------------------------S-S----------------------
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------------------------S-------------------------------------------------------
-------------------------------------------------------------------S------------
------S-------------------------------------S--------------S--------------------
---------------------------------------------------------S-------S-------S------
-S------------S--------------S--------------------------------------------------
--------------------------S-----------------------------------SSSSSSSSSSSSSSSSSS
SSS------------------S------S---S-----S------S------------S---------------------
------------------S-S-----------------------------SSSSSSSSSSSSSS----------------
----S---SS---------------------SS--S----------SS-----------S----S-------S-------
S-----------SSS--------S-------------S-----SSSSSSSS-------S----------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_976
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----------------------------------------------------------------------------CGGC
TTTCCACGTGAAATGG----------------------------------------------------------------
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>reverse_1837
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----------------------------------------------------------------------------CGCG
TAGCCTGAAGAATTGC----------------------------------------------------------------
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