>input_sequence_70876
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-----------------------------------------------------ATGCCGTCTTCGCCGCGTGCTCACTCC
TCTTTCTGTCAGCCTCTTTCTCTCAGGAGTTTACGTTACATTCAGATCCACTGGTGGGTATGTAGAATTAATTCGATTCA
ATTTCAATTTAATAGTTCATAATTT-CCACACAAAAAAGAAGGTCAAACCCTGCTTATGAGAGGAACTCAGCCACAAAAG
AAAGACAGAACATCGCATGCGGCATGTACTCTGGCTTTTCTCCGACTTTACCATGCCACTTCCTTATCTCTTTAGATGTG
TGCGCACGGA------------AAAA-------------AAATTGCTCTGTTGTTTTGATCTTTTCAGTCAAGTTGCTCC
TGGGAACTACTACCGAGGAGAGTGATACGGATGCTAGTGGTAATTGTAAGGAGTGGCAGCTGTAGG--CTTGTAGTACTG
GAATAAATGATTGGATCTGTTACTTGTTTTTTTCATCCTCAAATTGTTTTATCTTCTCCCTTTGCAGTTGTACTCGCCTT
GGGAGCTGAATCATGAAGATGCTGCCGGTACACTGCAACATGCACCCTC-------TCTCTTTCTCACCCTAACTA-CCC
CCTTCTTCTTTCCTGTTGCCTTGTTTT-----------------------------------------------------
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----------------------------------------------------------------CAATGGAAGCAGGTTT
TAGCCATGGTGGTGGGGCTTCATCAAGTTCTTGTTGGGGTAAAAATGGAGCATGGAGTAAGCTAAGAGATGAGCCATATT
TGGCAAGGAAGGTGGCCTCACTTTGCTTTTGCCAGATCTAG---------------------------------------
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>chr6B_1_TraesCS6B01G175500
TGCTCAATCCATTATGAATTATCTCCGCCTCTGTTATGTATTATTGCCATTGTGTTGATAGCTGATTAGTCTGCTTGATA
TCTCCTTACACATTT---------GATGTAGGACGGTCGATGCCGGCAGTTTCTTCTATGTAATATATATACAAAACAGG
TAGGGGGCTGCAAAAGCCATAGACAACGGAGGGACTATCATGGATGGT-TTCATGGATGCTGGACAGTTGCAGATAACTC
ACCTATCCTTTTATTCTATGGTATACACGATAGCCAGCGAGGATATCATGAGATCAAACCAGATACTCTTGGCCGTGTGA
ATTGGCTGGCGGAGAGTAGCTTGATCTATCCAGATTTAATTCCCAAGAGACAAAAAAGGAAAGAAAAAAGAAACAATGGT
CATTAAAAAAAGAAAAGTAAAATGGACTGAAGACATAAAATTATAAAGCCTCGTTTGAGATACTACCTATAGTTCTGACG
TACTACGAACAGTGCTAGGTTTAATTC-GTTTTCGGTGGGATATTTGTACTATGTACGACTGCCAAAAGAATATAATATT
ATGGACAGTTAAGTAAAGATGCATACTGTAGTGTCAACTGTTGCTGATTGGAACTACTACTTGGCAGCCGCAGCATGGGT
ACTACTCCTCCCGGTACTACTTAAAACCATGGGAGGGCTCAGCACTGGAGGTACGACCATCTATCCCATCCATCTCCTCT
GCTCCAAAACCA-ACGCCAAGAGCCCTTTCTCTCACCACCTCTCCTTTCAATTCCAGTACGGCGGTCGCTCACCGGATCC
AAGAAGAAAAAACCTCTCCCATTTCCTGTTGTGTTTCGAGGTTTTATTTGGGTTTCCTTTCGGATC-TTTGGGTTGTTTA
ATTGCTGCTTTTGTGTCGGAAGTTGTTCTTCGGTTGTGCAATCTGTGAAGTAATGTTAGCTCCTGGTGTGGAGAGGCCCT
CGAGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGCCGGCATAACATGTATGCCGTCTTCGCCGCGTGCTCACTCC
TCTTTCTGTCAGCCTCTTTCTCTCAGGAGTTTACGTTACATTCAGATCCACTGGTGGGTATGTAGAATTAATTCGATTCA
ATTTCAATTTAATAGTTCATAATTT-CCACACAAAAAAGAAGGTCAAACCCTGCTTATGAGAGGAACTCAGCCACAAAAG
AAAGACAGAACATCGCATGCGGCATGTACTCTGGCTTTTCTCCGACTTTACCATGCCACTTCCTTATCTCTTTAGATGTG
TGCGCACGGA------------AAAA-------------AAATTGCTCTGTTGTTTTGATCTTTTCAGTCAAGTTGCTCC
TGGGAACTACTACCGAGGAGAGTGATACGGATGCTAGTGGTAATTGTAAGGAGTGGCAGCTGTAGG--CTTGTAGTACTG
GAATAAATGATTGGATCTGTTACTTGTTTTTTTCATCCTCAAATTGTTTTATCTTCTCCCTTTGCAGTTGTACTCGCCTT
GGGAGCTGAATCATGAAGATGCTGCCGGTACACTGCAACATGCACCCTC-------TCTCTTTCTCACCCTAACTA-CCC
CCTTCTTCTTTCCTGTTGCCTTGTTTT-----------------------------------------------------
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----------------------------------------------------------------CAATGGAAGCAGGTTT
TAGCCATGGTGGTGGGGCTTCATCAAGTTCTTGTTGGGGTAAAAATGGAGCATGGAGTAAGCTAAGAGATGAGCCATATT
TGGCAAGGAAGGTGGCCTCACTTTGCTTTTGCCAGATCTAGTTTGCATCTTAGGTTAGGCCTCTTGTCTTTCTCTCACTT
TGGCCTTTGGTCTCTCTCTCTCTCTCTCCTTCCTGTTCCT-------------------CATACACGCTGTAAAAGGGTG
CACTGTAACTCCTGCTGTTGCAGTTTTACTTATGGGGGCTTGCTTATGTCTGTTTGCTTTAGTTTTCTTTTTATCTGTTC
AAGTTCTTGTTTTATTTTTTATGATGAGAGCTCCTTGGTTATATTTTGGTTTGCACCTTGTTTGTGATCTTCACTGCTAC
TCACTGGTGATTCTTCTTCCATTATTCTTTTTTCCAGGATAAGAGCATCATGTTAATAGCGAACGTAAC-AGCTGCACCA
TCAATTTGGACAAGGTACCACTCCCATGGTTTCTTTAGCCCCCTTTTTGTTGGTTATACTATCTGGTGCCTCCTTCTGAT
GGTGCGAATTGCAGCTGCTTTTGGTGTCATTAAGATGTGTTATTGGTTGCATCTGAATACAATTTAGTTTTTCTTGCTTT
GACCTACATGTGATTTGGTCTATGAGTGAGAAGTTGATAAAAATAAG--TCCAGATGATTAATATGTGTGCTTGGTTAAC
TGAAGCTGTTCTTCAGTTCTAGAAAAAAAATAAGTCCATCTTGCTTGTTGTTGAACACAGACTTGCCAAGAAGAATCTGA
AACGCGTCTAGTAACCTACCTAAGCACAGCCATATCAATTTGTGTGGAGAAAGAAGTGACACGTAGTAAAATCTAATCTC
TTGAATGATCTGGTTGATGTGATTCAAGGTGATGCACGCTTTAGACAAGTTAATTGCTATTCTAGCTAACATATATATGC
ATAGACCCATTTTCCAAGCGATGGTAAATCATTAAATTGTCAACATCCTCGTGCTAAGTTTGTTTGTGGTGGCAGTTTTT
TCTAGCTATCTACGTGTTAGTTT-CTGTGGTTCAATAAAAAAATAGTTATTTCTGTGGATCCATTGTGTTGATGTGATGT
ATTATTTCTCATTCGTTCATTTCA
>chr6A_1
TGCTCAATCCATTATGAATTATCTCCGTCTCTGTTATGTATTACTGCCATTGTGTTGATAGCTGATTAGTCTGCCTGATG
TCTTCTTACACATAT---------GATGTAGGACGGTCGATGCCGGCAGTTTCTTGTGTGTAATATATATACAAAACAGG
CAGGGGGCAGCAAAAGCCATAGACAGCGGAGGGACCACCATGGATGGTGTTCATGGATGCTGGACAGTTGCAGATAACTC
ACCTATCCTTTTATTCTATGGTATACACGATAGCCAGCTAGGATATCATGAGATCAAACCAGATACTCTTGGCTGTGTGA
ATTGGCTGGCAGAGAGTAGCTTGATCTATCCAGATTTAATTCCCAAGAGAC--------AAAAAAAAAAGAAACTATGGT
CATTAAAACT-------TAAAATGGACTGAAGACATAAAATTATAAAGCCTCGTTTGAGATACTAGCTATAGTTTTGACG
TACTATGAACAGTGCTAGGTTTAATTC-GTTTTAGGTGGGATATTTGTACTATGTACGACTGCCAAAAGAATATAATATT
ATGGACAGTTAAGTAAAGATGCATACTGTAGTGTCAACTGTTGCTGATTGGAACTACTACTTGGCAGCCGCAGCATGGGT
ACTACTC---CCGGTAGTACTTAAATCCATGGGAGGGCTCAGCACTGGAGGTACGACCACCTATCCCATCCATCTCCTCT
GCTCCAAAACCAAGCACCAAGAGCCCTTTCTCTCACCACCTCTCCTTTCAATTCCAGTACGGCGGCCGCTCACCGGATCC
AAGAAGAAAAAACCTCTCCCATTTCCTGTTGTGTTCGGAGGTTTTATTTGGGTTTCCTTTTGGATTTTTTGGGTTGT---
-TTGATACTTTTGTGGCGGAATTTGTTCTTCGGTTGTGCAATCTGCGAAGTAATGTTAGCTCCTGGTGTGGGGAGGCCCT
CGAGAGATTGACAGAAGAGAGTGAGCACACGGCGTGATGCCGGCATAACATGTATGCCGTCTTCGCCGCGTGCTCACTCC
TCTTTCTGTCAGCCTCTTTCTATCAGGAGTTTACGTTACATTCAGATCCACTGGTGGGTATGTAGAACTAATTCGACTCA
ATTTCAATTCAATAGTTCATAATTTTCCACACAAAAAGGAAGGTTAACCCCTGCTTATGAGAGGAACTCAGCCACAAAAG
AAAGGCAGAACA-CGCATGCGACATGTACTCTGGCTTTTCTCCGACTTTACCATGCCACTTCCTTATCTCTTTAGATGTG
TGCGCACGCAAAAAAATGAAGTAAAA-------------AAAATGCTCTGTTGTTTTGATCTTTTCAGTCAAGTTGCTCC
TGGGAACTACTACCGAGGAGAGTGATACGGATGCTAGTGGTAATTGTAAGGAGTGGCAGCTGTAGGCGCTTGTAGTACTG
GAATAAATGATTGGATTTGTTACTTGTTTTTTTCATCCCCAAATTGTTTTATCTTCTCTCTTTGCAGTTGTACTCGCCTT
GGGAGCTGAATCATGGAGATGCTGCCGGTACACTGCAACATGCACCCTCCTCTCTCTCTCTCTCTCACCCTAGCAACCCC
CCTTCTTCTTTCCTGTTGCCTTGTTTT-----------------------------------------------------
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----------------------------------------------------------------CCATGGAAGCAGGTTT
TAGCCATGGTGGTGGGGCTTCATCAAGTTCTTGTTGGGGTAAAAATGGAGCATGGAGTAAGCTAAGAGATGAGCCATATT
TGGCAAGGAAGGTGGCCTCACTTTGCTTTTGCCAGATCTAGTTTGCATCTTAGGTTAGGCCTCTTGTCTTTCTCTCACTT
TGGCATTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACGCTGTAAAAGGGTG
CACTGTAACTCCTGCTGTTGCAGTTTTACTGATGGGGGCTTGCTTATGTCTGTTTGCTTTCATTTTCATTTCATCTGTTC
AAGTTTTTGTTTTCTTTTTTATGATGAGAGCTCCTTGGTTATATTTTGGTTTCCACCTTGTTTGTGAT-TTCACTGCTAC
TCACCGGTGATCCTTCTTCCATTGTTCTTTTTTCCAGGATAAGAGCATCATGTTAATAGCGAACGTAACAAGCTGCACCA
TCAATTTGGACAAGGTACCACTCCCATGGTTTCTTTAGCCCCCTTTT-GTTGGTTATACTATCTGGTGCCTCCTTCTGAT
GGTGCGAACTGCAGCTGCTTTGGGTGTCATTAAGATGTGTTATTGGTTGCATCTCTATACAATTTAGTTTTCCTTGCTTT
GACATACATGTGATTTGGTCTATGAGTGAGAAGTTGATAAAAATAAGTCTCCAGATGACTAATATGTGTGCTTGGTTAAC
TGAAGCCGTTCTTCAGTTCTAGAAAAAAAA--AGTCCATCTTGCTTGTTGTTGAACACTGACTTGTGAAGAAGAATCTGA
AACGCGTCTAGTAACCTACCTAAGCACAGCCATATCACTTTGCGTGGAGAAATAAGTGACACGTAATAAAACCTAATCTC
TTGAATGATCTGGTTGATGTGATTCAAGGTGATGCACGCTTTAGACAAGTTAATTGCTAGTCTAAC------ATATATCC
ATAGACCCATTTTCCAAGCGATGGTAAATCATTAAATTGTCAACATCCTCCTGCTAAGTTTGTTTGTGGTGGCAGTTTTT
TCTAGCTATCTACGTGTTAGTTTTCTGTGGTTCAATAAAAATGTAGTTATTTCTGTGGATACATTGTGTTGATGTGATGT
ATTATTTCTTATTCCTTCATTTCA
>chr6D_1
TGCTCAATCCAATCTGAATTATCTCCATCTCTCTTATATATTATTGCCACTGTGTTTATAGCTGATTAGCCTCCTTGATG
TTTTCTTACACATTGGTTTGCATCGATGTAGGACGGTCAATGCCGGCAGTGTATA-----------ATATACAAAACAGA
TAGGGGGCAGCAAAAACCATAGACAGCGGAGGGACCATCCTGGATGGT-TTCATGGATGCTGGACAGTTGCAGATAAG--
---TATCCTTTTATTCTATGGTATACACGATAGCCAGCCAGGAGATCATGAGATCAAACCAGATACTCTTGGCTGTGTGA
ATTCGTTGGCGGAAAGTAGCTTGATTTATCCAGATTTAATTCCCAATAGAC--------AAA------------------
----AAAAAGAAAGAAAGAAAATGGACTAAAAACATAAAATTATAGGGCCTCGTTTGAGATACTAGCTAGAGTATTGCCA
TACTATGAACAGTGCTAGGTTTAATTCCGTTTTGGGTGGGATATTTGTACTATGTACGACTGCCAAAAGAATATAATATT
ATCGACAATTAAGTAAATATGCGTACTGTGGTGTCAACTGTTGCTGATTGGAACTACTACTTGGCAGCAGCAGCATGGGT
ACTACTC---CCGGTACTACTTAAAACCATGGGAGGGCTCAGCACTGGAGGTACGACCACCTATCCCATCCATCTCCTCT
GCTCCAAAACCAGACGCCAAGAGCCCTTTCTCTCACCACCTCTCCTTTCAATTCCAGTACGGCGGTCGCTCACCGGATCC
AAGAAGAAAAAATCTCTCCCATTTCCTGTTGCGTCCGGAGGTTTTGTTTGGGTTTCCTTTCGGATT-TTTGGGTTGT---
-TTGCTGCTTTTGTGTCGGAAGTTGTTCTTCGGTTGTGCAATCTGTGAAGTAATGTTAGCTCCTGGTGTGGGGAGGCCCT
CGAGAGATTGACAGAAGAGAGTGAGCACATGGCGTGATGCCGGCATAACATGTATGCCGTCTTCGCCGCGTGCTCACTCC
TCTTTCTGTCAGCCTCTTTCTCTCAGGAGTTTACGTTACATTCAGATCCACTGGTGGGTATGTAGAACTAATTTGATTCA
ATTTCAATTCAATAGTTCATAATTTTCCACACAAAAAAGAAGGTTAACCCCTGCTTATGAGAGGAACTCAGCCACAAAAG
AAAGACAGAACA-CGCATGCGGCATGTACTCTGGCTGTTCTCCGACTTTACCATGCCACTTCCTTATCTCTTTAGATGTG
TGCGCACGCA------------AAAAAATAAAATAAAATAAATTGCTCTGTTGTTTTGATCTTTTCAGTCAAGTTGCTCC
TGGGAACTACTACCGAGGAGAGTGATACGGATGCTAGTGGTAATTGTAAGGAGTGGCAGCTGTAGG--CTTGTAGTACTG
GAATAAATGATTGGATTTGTTACTTGTTTTTTTCATCCCCAAATTGTTTTATCTTCTCCCTTTGCAGTTGTACTCGCCTT
GGGAGCTGAATCATGGAGATGCTGCCGGTACACTGCAACATGCACCAGC-------TCTCTCTCTCTCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATGGAAGCAGGTTT
TAGCCATGGTGGTGGGGCTTCAGCAAGTTCTTGTTGGGGTAAAAATGGAGCATGGAGTAAACTAAGAGATGAGCTATATT
TGGCAAGGAAGGTGGCCTCACTTTGCTTTTGCCAGATCTAGTTTGCATCTTAGGTTAGGCCTCTTGTCTTTCTCTCACTT
TGGCCTTTGGTCTCTCTCTCT------CCTTCCTGTTCCT-------------------CACACACGCTGTAAAAGGGTC
CACTGTAACTCCTGCTGTTGCAGTTTTACTGATGGGGGCTTGCTTATGTCTGTTTGCTTTAATTTTCATTTGATTTGTTC
AAGTTTTTGTTTTCTTTTTTATGATGAAAGCTCCTTGGTTATATTTTGGTTTGCACCTTGTTTGTGAT-TTCACTGCTAC
TCACCGGTGATCCTTCTTCCATTATTCTTTTTTCCAGGATAAGAGCATCATGTTAATAGCGAACGTAACAAGCTGCACCA
TCAATTTGGACAAGGTACCACTCCCATGGTTTCTTTAGCCCCCTTTT-GTTGGTTATACTATCTGGTGCCTCCTTCTGAT
GGTGCGAATTGCAGCTGCTTTTGGTGTCATTAAGATGTGTTATTGGTTGCATCTGTATACAATTTAGTTTTCCTTGCTTT
GACATACATGTGATTTGGTCTATGAGTGAGAAGTTGATAAAAATAGATCTCCAGATGACTAATATGTGTGCTTGGTTAAC
TGAAGCTGTTCTTCAGTTCTAG-AAAAAAA--AGTCCATCTTGCTTGTTGTTGAACACAGACTTGCCAAGAAGAATCTGA
AACGCGTCTAGTAACCTACCTAAGCACAGCCATATCAATTTGCGTGGAGAAATAGGTGACACGTAGTATAACCTAATCTC
TTGAATGATCTGGTTGATGTGATTCAAGGTGATGCACACTTTAGACAAGTTAACTGTTAGTCTAAC------ATATATGC
ATAGACCCATTTTCCAAGCGATGGTAAATCATTAAATTGTCAACATCCTCCTGCTAAGTTTGTTTGTGGTGGCAGTTTTT
TCTAGCTATCTACGTTTTAGTTTTCTGTGATTCAATAAAAAATTAGTTATTTCTGTGGATCCATTGTGTTGATGTGATGT
ATTATTTCTCATTCCTTCATTTCA
>SNPs
---------------------------S---------------------------------------------------S
---S---------------------------------------------------S-S----------------------
--------S----------------S---------S--------------------------------------------
--------------------------------------S----------------------------------S------
---------------------------------------------------SSSSSSSS---S-----------S-----
---------S-S-S--S------------------------------------------------S--------S-----
-----S---------------------------S----------------------------------------------
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-------SSS-------------------------------------------------S--------------------
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-----------------------------------SS----------------------------S-----------SSS
S----------------------------------------------------------------------S--------
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-------------------------------------------------------------------S------------
---------S----------------------------------S--S--------------------------------
------------S-------------------------------------------------------------------
--------S-----------------------------------------------------------------------
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----------------S---------------------S-----------------------------------------
---------------S---------------------------------------------S----------S-S-----
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-----------------------------------------------------------------S--------------
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-------------------------------------------------------------S------------------
------------------------------S------------------------------S-----S---S--------
-----S-------S------------------------------------------------------S-----------
----S------S--------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-------------------------------------------------------S---------------S--------
---S------------------------------------------------------S---------------------
------------------------------SS------------------------------------------------
------------------------------------------S---------S------------------S--------
-----------------------------------------------------------S----S-SSSSSS--------
--------------------------------------------------S-----------------------------
------------------------------------------S-------------------------------------
--------------S---------
>forward_648
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--------------------------------------------------------------------CGCAGCATGGGT
ACTACTCC------------------------------------------------------------------------
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>reverse_1536
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---------------AAGATGCTGCCGGTACACTG---------------------------------------------
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>forward_700
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----------------------------------------AGCACTGGAGGTACGACCAT--------------------
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>reverse_2062
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-------------------------------------------------------------TACACGCTGTAAAAGGGTG
CA------------------------------------------------------------------------------
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