>input_sequence_70824
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---ATGCAGGGAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAA
CGGC------GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGATTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTAC
GTGATCTTTGATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGG
CTATGACCAGCA---CGGCAACAACGGTGGCTACGATCAC---------GGCAAGGGCACCTACT------------ACG
GCGGCGGCGAATGCTCGATCCGGCAGAAGGAGGACAGCGGCGAGATCGACGCGCTGATGAGCTC---------CGAGGAG
GAGGACGACGTGCTGAGCACGGGTCGCACTTCAGGGAGCCACGGCGAGGGCTCGCCGGACTCCACGTGCTCCCCCGGGTA
CGTGGTGAGCGTCAGCCCGAGTGGC---------------GGCGGAGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGCCCTCGACGAGGCCGTCAAGTAC
CTCAAGTCGCTCAAGGTAGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG-----------------------
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>chr4A_1_TraesCS4A01G409500
ACAACTAAGCCCCATAAGAAGGTGTCATACTTGTTCTAAAGGTGAAATTTGATGTGATACT--CCCTTTGAAACAGCGCA
CGCGTACATCAA---GAATGGAAGCCAAGTAAAATTCCACTCGATCGTCCATATGCAGGTAAGACATGCCAGACATAGCC
GGAACCACATGAAAGATGGTCTAGGACATGTTTCTAAAAAACACGTCTAGTGGATTTCGAAATGACCACAAAGTCTAAAT
CGTGACCCCTCACACAATTGATAATATGTTTATGCTTAGCCAAGTCACTTAACATCTGCTATTTCAAAACATGTCTCTCA
TGAGGAATCATCTTTAAA-TTGTAAAGCCTAACTT-ACGCGGGCTGTAGTATGATTTAAATGTTGCATCATT--------
------------AATTACTTTGTACTCTTAATCACATATTGCACTTTAATACCTTTTCCTTTTGACGAGGGTTATATGCT
ACTCCCTCCGTTCACT---ATAAGATGTTTTAACTTTTTT-AAATAAGATGTATATGACGT-GTTTTTAATGTGTTTATT
CACTTATTTTAATATGTACTTCCTCTTTCAAAATTCTTGTCTTAGATTTGTCTAGATCCGTATCTAGACAAATCTAAGAC
AAGAATTGATACATCTGTATCTAGACAAATCTAAGACAAGAATTTTGGGAAGGAGGGAGTACTATGTAGTTTATATTAAT
AAGATATCCAAAACGTATTCTAATAGTGAAGCGGAGGGGGCAGTAGTGTACTCATGTCCTGTTCTGGC-ATGTATGCACT
TCCTTTCCAGTCCTCGTTTC-----GCTCTGCTCTCACACTTGATAATGTATCATAG---TACATCGCAGTTCCATTACA
CTGATGCTTGCACTTCTTTTC--TTTAACTTCTATCTGATTGTTTGCTCGTGCCTACCACTTGCAGGCCGAATACTTCAG
TCGAAATCAACACCATTTTTCTCGAATTCCCCACAAAACCCATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAA
GTGATGCAGGGAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAA
CGGC------GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGATTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTAC
GTGATCTTTGATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGG
CTATGACCAGCA---CGGCAACAACGGTGGCTACGATCAC---------GGCAAGGGCACCTACT------------ACG
GCGGCGGCGAATGCTCGATCCGGCAGAAGGAGGACAGCGGCGAGATCGACGCGCTGATGAGCTC---------CGAGGAG
GAGGACGACGTGCTGAGCACGGGTCGCACTTCAGGGAGCCACGGCGAGGGCTCGCCGGACTCCACGTGCTCCCCCGGGTA
CGTGGTGAGCGTCAGCCCGAGTGGC---------------GGCGGAGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGCCCTCGACGAGGCCGTCAAGTAC
CTCAAGTCGCTCAAGGTAGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGG
CAACGCAGGGCGACTCAATGAGCTCAATGATGGGGGCGGAAGACCGGGTAGCTTGGT---GCTCCTTTTTGCACTGCCAG
TGCCATGATTTCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT--------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GGATGGTGTTGTAACTATCAG
GCCGATTATATACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCATTGCACAGTTGCTTACCA---TGTTGTTGTTGT
CTTGCGCTTAGTGCTTTTGAATAGTGTTTGTGTTTACCTAGGCACATATTACCATTTCACTAATCAAGGGTACCCTTTGC
AATGATTATTCCCACCTTGGGTTGAGCATGTGTGTCATAGCAACCTGGGA---GTTTTC--TATTTTTTTT---------
----AATATTTTATCTCTTAAACCATGCATCCAAATCCTGAACCGTTTTCTCTATTGAA-T-TCTCGCATCGAGATCATT
CAAAGTAGATCTCATGTCAATAGATTTCAACGAATCCTTTAGTTCTAGAATAGACAGC--AAAAAAAAAGTTGAGAGCAT
ATATTTTTTTTACTTTCTTTCTTTATTGGGAGGCACAGTTATGTCTCACATAGAAATAATATATGCCTTCATGAGAAGCA
AATATATGCTTCTTACGGAAGCAAAAAAAACACGTGTGTTTTTTTGTTTCGAGAG--ACAATTGTGCCTCTCGCGGAAGT
AAATATGTGACTCCAGGAGAAGTAAATTTGTGCCTCCTGTGTGAAAGAGAAACAAAAACACATTTCT-CCCTCTTCTGAG
AGGCATAGCAGCGCCTCTCAGAGAAGAAAATATGTGCCTCCCATAGAAGCAAAAAGAACATG----------------TT
TTTTTCCTTTTTCAAGAGGCACAACTTTGTCTCGCCCAAAAGCAAATGTGTGCCTCCCGTGTAAGAAAATAAAATACTTT
TTTTTTACCTTTTTCATGCGGAAGCAAATCTCTGCCTTCACAAGAAACAAATTTGTGCTTTCATGGAAGAAAAAA-
>chr4B_1
ACAACTAAGCTCCATGAGAAGGTGCCATACTTGTTCCAAAGGTGGAATTCGATGTGATATTCGCCCTTTGAAACAGCGCA
CGGTACATCAATGTTGAATGGATGCCAAGTAAAATTCCACTCGGCCCTCCAGATGCAGGCAAGACGTGCCAGACATTGTC
AAGACCACATGAAAGGTCATCTAAGACATGTTTCTGAAAACAACGTCTAGTGGATTTCGAAATGGCCACAAAGTATAAAT
CATGACCCCTCACACAATTGACAATATGTTTATGCTTAGCCAAGTCACTCAACCTCCGCTATTCCAAAACATGTCTGTCA
TGATGAACCATCTTTAAATTTGTAAAGCCTAGCTCGACCCGGGCAGTAGTA-GATTTAAATGCTACATCTATTTGTCGGA
TTTGCACACATAAATTAGTTTCTACTCTTAATCACAGATTGCACCTTAATACATTTTTCTTTTAACGAGGGTTATATGCT
ACTCCCTCCGTTCACTTTTATAAGATGTTCTAACTTTTCTCAAATCGGATGTATATATATCCGTTTTTAATGTGTTTGTT
CACTTATTTTAATGTGTTTGTTC----------------------ACTTATTTCAATCCGCGTGTATAGTATTAAAAGAA
AAGTCCA-------------------------------------------------------------------------
-----------------------------------------------------------CGTTCTGGCAATGTATGTACT
TCCTTT---------GTTTC-----GCTCTGCTCTCACACTTGAGAATGTATCATAGGAGTACATCGCAGTTCCATAATA
CTGATGCTTGCAGTTCCTTTTCTTTTAACTTCTATCTGATTGTTTGCTCATGCCTACCACTTGCAGGCGGAATACTTCAG
TCGAAATCAACACCATTTTTCTCGAATTCCCCACAAAACCAATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAA
GTGATGCAGGGAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAA
CGGC------GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGACTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTAC
GTCATCTTTGATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGG
CTATGACCAGCA---CGGCAACAACGGCGGCTATGATCACAACTACA---------------------GCGGCGGCCACG
ACGGCGGTAAATGCTCGACTGGGCAGAAGGAGGACAGCGACGAGATCGACGCGCTGATGAGCTCCTGGGACGGCGAGGAG
GAAGACGACGTGCTGAGCACGGGTCGCACTTCAGGGTGCCGCGGCGACGGCTCCCCGGACTCCACGTGCTCCCCCGGGTA
CGTGGTGAGCGTCAGCCCGAGTGGC---------------GGCGGGGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACTCCCGCCGCCCTCGACGAGGCCGTCAAGTAC
CTCAAGTCGCTCAAGGTGGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGG
CAACGCAGGGCGACTCAATGAGCTCAATGATGGAGGCGGAAGACCGGGTAGTTTGGT---GCTCCTTTTTGCACTGCCAG
TGCCATGATTTCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT--------------------------
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-----------------------------------------------------------GGATGGTGTTGTAACTATCAG
GCCGATTATATACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCACTGCACAGTTGCTTACCA---TGTTGTCGTTGT
TTTGCGCTTAGTGCTTTTGAATAGTGTTTGTGTTTACCTAGGCACATATTACAAGATCACTAATCAAGGGTATCTTTTGC
AATGATTATTCCCACCTTGAGTTAAGCATGTGCGTCATTTGTCGCGACTTGTGGTTTTC--TTTTTTTAGATTCGTTTAT
TCAAAATATTTTATCTCTTAAACTGTGCATCAAAATCCTGAACCG-TTTCACTATTGAATT-TCTCGTGTCGAGATCTTT
CAAAGTAGATCTCATGTCAAAGTAGAT-----------------------------------------------------
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>chr4D_744
GT------------------------------------------------------------------------------
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-----CA-------------------------------------------------------------------------
-----------------------------------------------------------TGTTCTGGC-ATGTGTGCACT
TCCTTTTCAGTCCTTGTTTCGCTCTGCTCTGCTCTCACACTTGAGAATGTATCATAG---TACATCGCAGTTCCATTATA
CTGATGCTTGCAATTCCTTTTCTTTTAACTTCTATCTGATTGTTTGCTCATGCCTACCACTTGCAGGCCGAATACTTCAG
TCGAAATCAACACCATTTTTCTCGAATTCCCCACAAAACCCATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAA
GTGATGCAGGGAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAA
CGGC------GGAGCATACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGACTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAATAACTAC
GTCATCTTTGATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGG
CTATGACCAGCA---CGGCAACAACGGCGGCTATGATCACAACTACA---------------------GCGGCGGCCACG
ACGGCGGTAAATGCTCGACTGGGCAGAAGGAGGACAGCGACGAGATCGACGCGCTGATGAGCTCTGGGGACGGCGAGGAG
GAGGACGACGTGCTGAGCACGGGTCGCACCTCAGGGTGCCGCGGCGACGGCTCCCCGGACTCCACGTGCTCCCCCGGGTA
CGTGGTGAGCGTCAGCCCGAGTGGC---------------GGCGGAGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACCCCCGCCGCCCTCGACGAGGCCGTCAAGTAC
CTCAAGTCGCTCAAGGTGGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGG
CAACGCAGGGCGACTCAATGAGCTCAATGATGGAGGCGGAAGACCGGGTAGTTTGGT---GCTCCTTTTTGCACTGCCAG
TGCCATGATTTCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT--------------------------
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-----------------------------------------------------------GGATGGTGTTGTAACTATCAG
GCCGATTATATACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCGCTGCACAGTTGCTTACCATGTTGTTGTCGTTGT
TTTGCGCTTAGTGCTTTTTAATAGTGTTTGTGTTTACCTAGGCACATATTACGAGATCACTAATCGAGGGCACCCTTTGC
AATGATTATTCCCACCTTGGGTTGAGCATGTACATCATTTGTTGCAAACTGTGGGTTTTCTTTTTGTGAGATTCTTTTAC
TTGAAATATTTTATTTTTTAAGCCATGCATCAAAATCCTGAAGCGTTTTCACTATTGAA-TTTCTCGCATCGAGATCTTT
CAAAGTAGATCTCATGTCAATAAGTTTCAAGGAATCATTTTGTTTAAAAAAACAGCAAAAAAAAAACAAGCTGAGAGCAC
AATTTTTTCACTTTTTCCCCTTATAGTTGTGCCTTTCACACAAGCAAATATGTGCCTCTTG-----------GAGAAGTA
AATCTGTGCTTCTTGCGGAAGCAAGAAAAACCAC-GTGTTTTTTCATTCCGAGAGGTACAATTATGCTTCTCGCGGAAGC
AAATATGTGACTCTAGGAGAAGTAAATTTGTGCCTCCTGTGTGAAAGAGAAACAAAACGCATTTCCCCCCCTTTTCTGAG
AGGCAT---------------AGAAGAAAATATGTGCCTCCATGAAAACCAATTATGTGCCTCTCGTAGAAGAACGCATT
TTTTTTCGTTTTCAAGAGGCACAACTTTGTCTCTCCCAAAAGCAAATGTGTGCCTCCCGTGTAAGAAAATAAAACACA-T
TTTTTTACCCTTTTCATGTAGAAGCAAATCTCTGCCTCCACAAGAAACAAATCTGTGCTTCCAGGGAAGAAGAAAA
>chr7A_1016
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------------------GGCTACGGGTACGGCTATGGCGGTGGCTACGGCGCCGGCTATGACATGGCCGGGTACGGCAA
CGGAGCCGGAGGAGCGTACTACACCAACGACCGGTACCCCGCGG------CGGCGCCGCCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGACTTCCCGGCTCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATACCTGCCCCAAGAACTAC
GTCATCTTTGATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGG
CTACGACCAGCAGCACTGCAACAACGGCGGCTACGATCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGG
ACGGCGGCGAGTGCTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGACGGCGACGAG
GAGGACGACGTGCTGAGCACGGGTCGCACGCCCGCGTGCCGCGGAGGGGGCTCGCCGGACTCCACCTGCTCCTCCGGGTA
CGTGGTGAGCGTCAGCCCGACTGGCAACGCCACCGGCGCCGGCGGAGGCGGCGAGAGGAAGAAGGAACGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGTCCTGGACGAGGCCGTCAGGTAC
CTCAAGTCGCTCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGATAGCGACCTCACATGG
CAATGCAGGTCGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCACTGCCAT
GATG---CCATCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCG
ATCTCTCGCCCCCCTCCCTCCCTCCC-TCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCT
TTTCTTCCCCCCCTCCCCCTCCCTCTCCCTC-----------TCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTAGCAT
GCTGATTATATACACCGTGTTTTTGTTTATCCCCGT--------------------------------------------
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>chr7D_1016
GGCTA---------------------------------------------------------------------------
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-----------------------------CGGCTACGGCGGTGGCTACGGCGCCGGCTATGACATGGCCGGGTACGGCAA
CGGAGCCGGAGGAGCCTACTACACCAACGACCGGTACCCCGCGG------CGGCGCCGCCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGACTTCCCGGCTCCGCTCACCGGGCTCGAGTTCCAGCCGTCAGATACCTGCCCCAAGAACTAC
GTCATCTTTGATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGG
CTACGACCAGCA---CTGCAACAACGGCGGCTACGACCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGG
ACGGAGGCGAGTGTTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGACGGCGACGAG
GAGGACGACGTGCTGAGCACGGGTCGCACGCCTGCCTGCCGCGGAGGGGGCTCGCCCGACTCCACCTGCTCCTCCGGGTA
CGTGGTGAGCGTCAGCCCGACTGGCAACGCCGCGGGCGCCGGCGGGGGCGGGGAGAGGAAGAAGGAGCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGTCCTGGACGAGGCCGTCAGGTAC
CTCAAGTCGCTCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGACAGCGACCTCACATGG
CAATGCAGGTCGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCGCTGCCAT
GATGATACCATCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCG
ATCTCTCGCC------CCTCCCTCCC-TCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCT
TTTCTTCCGCCCTC------------CCCCGCCCCCTCCCTGTCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTTGCAT
GCTGATTATATACACCGTGTTTTTGTTTATCCCCGT--------------------------------------------
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>chr7B_1016
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------------------GGCTACGGGTACGGCTACGGCGGTGGCTACGGCGGTGGCTATGACATGGCCGGGTACGGCAA
CGGTGCCGGAGGAGCCTACTACACCAACGACCGGTATCCCGCGG------CGGCGGCGCCTGCCTATGAGGACCCGCTCG
CCGGTCGGAGGCAGCACGATTTCCCGGCTCCTCTGACCGGGCTCGAGTTCCAGCCGTCGGACACCTGCCCCAAGAACTAC
GTCATCTTTGATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGG
CTACGACCAGCAGCACTGCAACAACGGCGGCTACGACCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGG
ACGGCGGCGAGTGTTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGATGGCGACGAG
GAGGACGACGTGCTGAGCACGGGTCGCACGCCTGCGTGCCGCGGAGGGGGCTCGCCGGATTCCACCTGCTCCTCCGGGTA
CGTGGTGAGCGTCAGCCCGACTGGCAACGCCGCCGGAGCCGGCGGGGGCGGCGAGAGGAAGAAGGAGCGGATGAAGAAGA
TGATGAAGACGCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCGGCCGTCCTGGACGAGGCCGTCAGGTAC
CTCAAGTCGCTCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGATAGCGACCTCACATGG
CAATGCAGGTCGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCGCTGCCAT
GATGATGCCATCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCG
ATCTCTCGCC------CCTCCCTCCCCTCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCT
TTTCTTCCCCCCTC------------CCCTC-----------TCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTAGCAT
GCTGATTATATACACCGTGTTTTTGTTTATCCCCGT--------------------------------------------
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>SNPs
----------S----S--------S-----------S-------S----S---------S--------------------
--SSSSSSSS-S----------S--------------------SS-S----S-------S-----S----------S-S-
SSS------------S-SS----S-----------S----SS----------------------S---------S-----
-S-------------------S---------------------------S---S--S------S------------S---
---S---S-----------------------S--S---S-----S------S----------S-S----SS---------
-----------------S---S--------------S-------S-------S----S-----S----------------
-----------------------------S--------S------SS---------SSSSS----------------S--
-------------S---SSS-S-SSSSSSSSSSSSSSSSSSSSSS-S--S-S-SS-----SS-S--S-SS-S-SS----S
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
------S-------S-----------------------------S---------------------------------S-
------------S---S---S----------------------------S------------------------------
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--S-----------------------------------------------------------------------------
---------------------------S---------------------------S------------------------
S--------------------------------------S----------------------------------------
------------------------------------S---S---------------------------------------
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-----------------S--------------------------------------------------------------
---------------------------------S-----------------S----------------------------
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-----------------------------------------------S--------------------------S-----
S---------------------------------------------------S-SS------------------------
--------------------------------S-----SSSSSS-SSSSS------------S-----SSS---------
-------------------------------S------------------S--------------------------S--
----------------------S-------S-----S---S---SS-S--S-S-SSSS--------S---S--------S
-SS-----SSSSS----SSSS-S--S-S-SSSSSSSSSSSSSSS-SS-S--SSSSS-SS-SSSSSSSSSSSS------S-
---S-S--------S---------S------SSSS---------SS--S--------------S---S-----------S
-------------S-------------------------------------------SSSSS--S-S-----S-------
------SSSSSSSSSSSSSSS--------------------SSS-S--S---SS-SSSSSSS------------------
-----S-S-------------------------S----------------------------------------S--SS-
---------S--------SS-----------------S--------------S-------S--S-------S----
>forward_161
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-------------------------------------------------------------AGACATGCCAGACATAGCC
G-------------------------------------------------------------------------------
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>reverse_2235
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--------------------------------------------------------------------------TGTTGT
CTTGCGCTTAGTGC------------------------------------------------------------------
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