>input_sequence_70727
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---------------------------------------ATGGGCATGGGCCTTGAGATCCTGAGCTCCTCCCCCTCCTC
TTCCAA---------------CGAGAACGCGTTGG------------TGGCCAAGCGCCCGGCGGGGCGCACCAAGTTCC
GGGAGACAAGGCACCCGGTGTACCGCGGCGTGCGGCGCCGGGGCAACGCCGAGCGGTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTATGCCACGGCCGAGATCGCAGCGCGCGCCAACGACGCCGCCATGCT
CGCCCTGGGCGGCCGCTCCGCCGCGCGCCTTAACTTCCCGGACTCCGCGTGGCTGCTCGCCGTGCCGTCCGCGCACTCCG
ATCTCGCCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCGGATTTGCAGCGACGGGAGGCTGCCGGTGGGTCCATCACC
GCCACCG------------TCAACGAGGAGGCCTCCTGTGGCGCTCCTGCGGAGTCGTCGTCGGAGTCTGACGATGCCGG
TTCGTCGGAGACGTCGAAACCTTCTGCGCATGGGGCCTTTGCGCTGCCGGGCGGAATGGACGTCGAAATGTTCAGTAGGC
TTGACTTGTTCCCGGAAACGGACTTGGGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTCATGGACCCACCGCCGGTG
GCGACCGGCACCGGCGCGTACTGGGATGACGGAGAGTTCGG------CGAGGTGGCAACTGAGTTCGCGCTCTGGAGCTT
GTAG----------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G311900
CCCATTATATGATCTATGTGCTTGGATCCGAGTCCAAGGACGACACCCTTCATGCACATTTTCATTTAAAAGGCACCACT
ATTAAGGAAACTTATCTTA---TTTTTTCGTTCTGAAGAGCTCTCGTCCCGGTTTCTCAATAAAAGACAA----------
----------CGTTAGGGAAACTTCTAATAGTTCGAGTGTTGTCAACACGGTGGTAGTTATTGACGTTTTATTACAATGA
GTCGCACGCCTTGCCTAATTCTTTCTTCTCATTGCTTTAGTAGTTGTGCACGTCCTATCCATGCAAAGGTCAGGTGTGCG
TTTAGCTCCTTGAGAC---ACTACAATTCAATGAAAATGCCCTCTGCTTCCTTGAGTCCCAATTGCTTCGGACCATATGT
CGGTAATTTGGCGCCATCGCGGTTTACGGTCACCGGTGTCTCTC--GTGCCTTCCGTGTCCAGATAACTTGGAGAAACAC
AGGACTCATTCAATAGTACTCCCTCTGTCCCAAACTATAAAAACGTTTTTAACACTATAGTAGTGTTAAAAACGTTGTTA
TATTAGGGGACGGAGCGAGTAACAACTGTCTGTCCCTTCGAGCCTTCACTAGTTCACTTCGTCACGCGCCTACCAGCCGT
CCAACCCCAGCCTTC-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------ACTAGTTCACTGTGTTAAGCAAGCAGGAAGTTGCCTCTTGTTTA-----ACACTGCAAAGCCG
AAAGCCCCCACACGCCCAG------CAGGAGAAAAGTCACATGAGGCTATTAACGCCACTTAATTTAATCCTAC----AC
GGTCCCATCGTCACCAGCTGTTTGTACGCCGGCATCCCGACCGCTGTCTTCAGCGCGTTCATACATTCG--AAGC-TCC-
AGCACAGCACATAACTATAAATACAT-CTCACACACTCCACAGATGCCAA----------CAGCGAACACTCCCACTCAA
GCTCAA---GTATCTCGCACCGGAGT-AGCTCACACTCCTCACTAAGCTCAAG---CACCAAGCTCGACTGCTCAGAAAG
GAAG------------CGCCGACCACTCTGCCGGTTGCCATGGGCATGGGCCTTGAGATCCTGAGCTCCTCCCCCTCCTC
TTCCAA---------------CGAGAACGCGTTGG------------TGGCCAAGCGCCCGGCGGGGCGCACCAAGTTCC
GGGAGACAAGGCACCCGGTGTACCGCGGCGTGCGGCGCCGGGGCAACGCCGAGCGGTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTATGCCACGGCCGAGATCGCAGCGCGCGCCAACGACGCCGCCATGCT
CGCCCTGGGCGGCCGCTCCGCCGCGCGCCTTAACTTCCCGGACTCCGCGTGGCTGCTCGCCGTGCCGTCCGCGCACTCCG
ATCTCGCCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCGGATTTGCAGCGACGGGAGGCTGCCGGTGGGTCCATCACC
GCCACCG------------TCAACGAGGAGGCCTCCTGTGGCGCTCCTGCGGAGTCGTCGTCGGAGTCTGACGATGCCGG
TTCGTCGGAGACGTCGAAACCTTCTGCGCATGGGGCCTTTGCGCTGCCGGGCGGAATGGACGTCGAAATGTTCAGTAGGC
TTGACTTGTTCCCGGAAACGGACTTGGGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTCATGGACCCACCGCCGGTG
GCGACCGGCACCGGCGCGTACTGGGATGACGGAGAGTTCGG------CGAGGTGGCAACTGAGTTCGCGCTCTGGAGCTT
GTAGCCGATTCTGC-TATGTTTTGACTCTGTAGTCTTTATTTTTTCCAG-------------------------------
-----------------------------------------------------------------------TTGAGAATT
CATTATAACACAGTTTTATTCCACTGTTTATACTCCGGTTCTTCTCTAGCTG-AGACGAAGTACA-C-------------
--------------------------------------GCAGTTTCAAGCTGTAAAAAGGAGCACACAAAAAAAAC----
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----------ACAAATCGAAGCAGATACAGTAGTAGAACGAGAGGCGAGACGGCTTTGCAATGGGCTCCAGAAAAAGGAA
ATATTCCTTCATGCAGCATGAGCTCAACAGGCAAAGCAGAACCCGACGAGAGAGAGGCAGCTTTCAGTCGATGTTAACCC
TTGTTCGCAACGAG-----------CAATCCACAAGATGTGGTCCGATGTCATGTCTCCCATCC----------------
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-------------------GTCTGTCTATAACGTGTGGTCTCTCGGGTTGATCTGGTCACGGGCCCAGCAGGTTTGAGCG
ACGAGAGCTCTGAATCTTCTCGGTGT----------------------------------GTCTCCTGTGGAAATCTTTG
CAGCTGAGCCTGCCGTCACCTTCACTCACAGACTCGCTTTCAGCGGGACTAAGATGATGAGGCAGCAGCACACTCTCACG
CGGGGCGGGGAGCCGGCGGGTGTTCTTCCGATATCTTTTGTAGGATGTGACTTGTCCTTGTAGCCAGATATTTAGACGTG
TAGTGATACTTGCTGAGTAGT-----------------------------------------------------------
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---------------------------------------------------------------------------GACTA
GCGCGTGTGCACAATACGTAATTCCGAACTTGTTTCCATTCGGTGTAAAGGATTTCACAGGATTTGTATAACACTATAAT
TTCTTTCGTAGTACTATTTTGAAGGAAAACTATAGGAAAATGATAACTAGCAAACACCAGATTTTTTGGCGCTCTGAGTG
AACGCCCTCAAAGCCGTCTGATCATGGTAGAACAACAGCAATTTTTCTGTGAAGCGTGACAGTTTTCTGTTTTTTTCCCC
GCTACATGACCATTTCGCCTCCGATCATGGCAAACCCTACAAAGTTGACATGACAAATTTATTAGTAGGTTTGGCATTGT
AA--GTTTGACGTATGCTGAAAAAACGCTC--------------------------------------------------
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>chr5D_1
CCCATTATATTAACTATGTGTTTGGATCCGAGTCCAAGGACGACATCATTCATGCACATTTTCATTTAAAAGGCATCGCT
ATTAGGGAAACTTATCTCTTCTTTTTTCCGTTCGGAAGAGCTCTCGTCCCGGTTTCTCTAAAAAAAATGATAAACAAGCT
CATGTCAGTGCGTTTGGGAAACTTCTAATAATTCGAGTGTTGTCAACACGGTGGTAGTTACTGATGTTTTATCACAATGA
GTCG---GCCTTGCCAAATTCTTTCTTTATATTTGTTTATTGGTTGTGTGCGTCTTAGCCATGCAAAGGTGAGCTGTGGG
TTTAGCTCCTTGAAGCACTACGACGATTCAATGAAAACGCCCTCTATCTCCTTGAGTCCCAATTG-CTCGAACCAGATGG
CCGTAATTTGGCGCCATAGCGATTCATGGTCACCGATGCCTCGCTTGTGCCTTCCGCGTCCAGATAACTGGGAGAAACAC
AGGACCCATTCAATAGT---------------------------------------------------------------
--------------------AACCACTGTCTGTCCATTCGAGCC--------TTCACTTCGTCACGCGCCTACCAACCGT
CGAACCCCATCCTTC-----------------------------------------------------------------
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-----------------ACTAGTTCACTGTGTTAAGCAAGCAGGAAGTTGCCTCTTGTTTA-----ACACGGCAAAGCCA
AAAGCCCCCACACGCCCACCACCACCAGGAGAAAAGTCTCATGACGCTATCAACGCCACTTAATTTAATCCTCCACGTAC
GGTCCCATCGTCACCAGCTGTTTGTACACCGGCATCCCGACCGCTGTCTTGAGCGCGTTCATACAACTTCCAAGC-TCC-
AGCACAGCACATACCTATAAATACGT-CTCACACACTCCGCAGATTGCAA----------CAGCAAACACTCTCACTCAA
GCTCAA---GCATCTCGCACC----T-AGCTCACACTCCTCGCTAAGCTCAAG---CACCAAGCTCGACTGCTCCATAAG
GAAG------------CGCCGACCACTCTGCCGGTTGCCATGGGCATGGGCCTTGAGATCTCGAGCTCCTTCCCTTCCTC
TTCCAA---------------CGAGAACGCGTTGG------------TGGCCAAGCGCCCGGCGGGGCGCACCAAGTTCC
GCGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCCGGGGCAACGCCCAACGGTGGGTCTGCGAGGTGCGCGTCCCT
GGCAAGCGCGGCGCTCGGCTCTGGCTCGGGACGTACGCCACAGCCGAGATCGCAGCGCGCGCCAACGACGCCGCCATGCT
CGCCCTGGGCGGCCGCTCCGCCGCGCGTCTCAACTTCCCGGACTCCGCGTGGCTGCTCGCCGTGCCGTCCGCGCACTCCG
ATCTCGCCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCGGATTTGCAGCGACGGGAGGCTGCCGGTGGGTCCATCACC
GCCACCG---------CCACCGCCGAGGAGACCTCCTGTGGCGCTCCTGCGGAATCCTCGTCTGAGTCTGACGATGCCGG
TTCGTCAGAGACGTCGAAACCTTCTGGCAATGGAGACTTCGCGCTGCCGGGCGGAATGGACGTCGAAATGTTCAGTCGGC
TTGACTTGTTCCCGGAAATGGACTTCGGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTGATGGACCCGCCGCCGGTG
GCGACCGGCACCGGGGCGTACTGGGATAACGGAGAGTGCGG------CGAGGGGGCAACTGATTTCGCCCTCTGGAGCTA
TTAGCATATTCTGC-TTTGCTTTGACTCTGTAGTCTTTATTTTTTCCTTCGC----------------------------
-------AAAGTTTTCCAATTTCGGGAGAGGACTCTGTAGGCCATAGCTAGCAAATTGAAGCTGCTTGCAATCGAGAATT
CATTATGAAACAGTTTTATGCCACTGTTTATACTCCGGTTCTTCTCTAAATTAAGACGTAGTACA-C-------------
--------------------------------------GCAGTTTGAAGCTGTAAAAAGGAGCACAAAAAGGAGAAATAC
CCTTTGGCTCCCGCATGTATATACACCCTATATGGGGTATTTTTTTAAATAATTAAATAAAGAGTTAAAATAGTTAAAAA
GTATTTTTAGATTAAACTTGACTTACTTGCACACTAGTATATAAATTTTCACAATATAAAAACCGACGTTGACTTCACAG
CGAAAAGGACAAAATTTATTTGCTATTATAGGTCACTATTCACGCTATTTTGATCAAAAAATTGTCTTTTTTGAAAAGAA
GTCAAAGAGGAATTTTCTTTTTGTGAAACTTTTCTCACTAGTATAATGAATGGTCAAGTTTATTTCAAAAATACTTTCAG
AAAATTTTGACTTTTTGTTGAATTGCTAAAAAAAATTCATATAGGGTACATATGTACCAAGGAACCAAACATTCCCCTCC
CACAAAAAGAACAAATCGAAGCAGATACGGTAGTACAACGAGAGGCGAGACGGC-TTGCAATGGGTTCCAGAAAAAGGAA
ATATTCCTTCATGCAGCATGAGCTCAAGAGGCAAAGCAGAACCAGACGAGAGGGAGGCAACTTTCAGTCGATGTTAACCC
TTGTTTGCAACGAG-----------CAATCCAGAAGATGCGGTCCGATGTCATGTCTCCCATAC----------------
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-------------------GTCG----ATAACGTGTGGTCACTCGGGTTGATCTGGTCACGGGCCCAACAGGTTAGAGCG
ACGAGAGCTCTGAATCTTCTCGGTGT----------------------------------GT------------------
----------------CACCTTCACTCACAGGTTCACTTTCAGCGGGACTAAGATGGTGAGGCAGCAGCACACTCGCACG
CGGGG-----AGCCGGCGGGTGTTCTTCCGATATCTTTTGTAGGATGTGACTTGTCCTTTTAGCTAGATATTTAGACGTG
TAGTGATACTTGCTGAGTACTGACTATGTTAGGAACCCACTCACGAATCACTCGAATTACTCCATTACAGGAAGATTAAG
CTCAGATACAGAGATTGGGGAAGGAGGAAGGAGGAAGTACAGGAGGTAGGGGAAGAGGAGGCCGCCGTTGCCGTTTCTGA
TCCAAGCCCGGATAACCTTTCGCTGCTGCTCTCCCGTGAATACTTGTAGTCAGCCCTCGGAGTGGTAACCCGTCAGGCCC
GGCCCATATGCTGGTGGGCTCGCTGCTTCGGCTGCCCGCTTTGTGCTGCAGCCGAAGTATTTTGGGTCGCTGACAGACTA
GCGCGTGTGCACAATACGTAATTCCAAACTTGTTTCCATTCGGTGTAAAGGATTTCACAGGATTTGCATAA---------
--------------------------------------------------------------------------------
------------------------------------------------------CGTGACAATTTTCTGCTTTTTTTGCG
CAACGTGACAATTTTCGCCTCCAGTCATGGCAAATCCAATAGAGTTGACATGGC-AATTTATTAGTTGGTTTGGCATGGT
ATATGTTTGACGTTCGCTGGAAAAACGCTCCCTGGGAACATCCCCGAGATATTGCTGTCCAAACTATATCAACTGGAGCC
ACTTGATGGGTTCTACGTTTTCTCCTATGGTGCAATCAAGGATCAATTTCAGTTTGCTATATTAAGATTAGCAAGAATCA
AAGAAGGGATGCTTTCTCAGGGTGAGTGTTGACGTACGTCTATAAACGTCTCCGTTTGTATTGTGTTTCTAAACAGGAGA
AATGAGTTGACATATATCTCCTCGAACTGGCAAAACTTTGAAGGCCAAATCATTTTAAATGTTTACAGCGAGAGCTGAAT
TCGTAAGTTCAGGTTCTTCTATTAATTATTTTTTCGGTATTATATATTATGTTCCATTTAATAAATTATTATATATAAAC
CAATTGTTAAATTATATATTATGTTCCATTTAATGACCATATTCGTAGATAAATGTCCCTACACCTAACTATGCAGCGGT
ACCATATTTGAGGTCATATTTGCCCGTGCACATACGGTGTCAGGGAGGCACACTTTGGTCGCCGACTTTCCTAAACGTAT
CACCCCTAGATTATGACGATAGAGTCGTATGACTACCAAACTTGGTGAGTCCACATCATGTGACAAAAAGAAATCAAGAA
GAAGCAAGGACACATTCGACATCTCTTGAAACCCAGGATTTGTTTTATAGGATATCCAATCTAGGCATCCCGCCTGGATT
GTTCACGAAAGAATCCAACGAGTTAACATCCAACCAACCGAAAACCTTATTGTGTTCCCCCATTGTAATATCCTTTGAAA
TAATCCCGAATAAGCAGTAGTCTAACTATCACCTATCTCAAGGGCCCGAACCTAGGTAAAATCCGTGTTTTGTGTTTGTT
CTGTGGTTGCGTCCATTACCAAAAAATCTACATGCAACTATCGTATTGTTGTCAGATACTTTGCGAAGCCCCCTAATGTG
GCGGTGGTGGGGTTGTCTCCCCCCAAGGAGGTGCTTTGAGAAGAGGGTTGTAGACTGAATCCTAACACAATTTTAGGTAT
AAGGGGCAACTCTAACACAGATCCCTTATTGGACATCACCAAATGTTCGTCCGCCATCCAACCATATTCATCAAATGTCC
GTCCTTTGTCCAAGAGGGAGAGAGGACTCCAGACTCAGCTTGTAGCGTACGCAGATGTCCGGACTCTTTCAAAGCTCCCC
TGATTTGATTCCGATTTGTAACATTTCAGAAGTCTGAATCGACATTTGGTGAATAATGTTAAAAGCATCATCTCATCCAA
AAAAATTGATAGACCGCGTTGGAGTTGCCCTATATGTGGACTGTTGGAATACTCATGGCACCATGGTTGTCCATCTACTA
AGGGCATCTCCAACGCCGACCCACAAATGTCTTTGGTATATGTCCATTTTTATATGCGGACGTGGTCCGTGGATATGATG
CGGGAGTGAACCATCCAATGCTAATCACAAAGTATCCGGATGGGAAAAGAAAAAATAGGTAGGGATCATGCATGTGATGG
GATATTTGTGGTTTAATGTCCGGTTGGGAGGAGAGAGCTGAGAGGGGACCATGCATGTGCGGTTGGGAGAAGAGAGAGAA
AAGAGGGACCATGTGTTTGGTCAAGTGCATGTCCGGGCTCTGGCAAAATCCTCCACGTTTGTCTTTTGGATATCAGAATT
TTCGTATATCCTAACTGCTGAGCGGACATATACAGGTTCCGTTGGATGAAAAAAATTGTCCGGACATATAGTGGAGGTTC
GAGGGTCCGCCTCCGAGCCTCCGAGAGATCTTGAGAGCATCTACAGCCGGACGCCTCAAACCATCCCTCATACGCCCGCG
GACACGCCCGATCTGTGATCGAACAGGAGAGAGAAGGAAAAGCGTGACCCAACCAGACTCCTAATATAATCCCTATATGC
CAGGGCTGTCCGCGAACCCCATATCCATCTTAAACATGTTGAGGATATGAGTGCTCGCGGACGCGCCCGGGCATTCCGCC
ACATAGAACGCGACCCCACCCCGGACCACCTTTTCTTTTTCTGTATTCATTCTTTTATTTCTACTCTTCATCTCCACCAA
TCACGTGCAAATGATCGGACATATGATAATAAAAATAAGAAGTGTGGCTACGCGGGCGGTAAATAAGGGCTTAAACGGAC
ACGCCTGGTCACTAACAGGCCGCGTCCGTGGGCGTACGAGGTGAAATTTGCTCATTGTTGGTGGAGATGCTCTAAGGCCC
TTCACTCTCTGCTGGGTGCCGTATTTCTGCAAAGCGAGCCACCTACACACAGATTGCAACTGAAAAAATTTCAGCCCCTT
TCTGCCTTCAGCCTCCGTAGACCTCGGGGAACCAGACGACCCCATTCAGCAGTGACTGCTGTCTTCTCTTTGCGGCCGAT
CAGCCGGCTGACCAATCAGGCAAGGCAATCACCGCTGCATCAACACTGTTAAGCCATCAGGAAGTTGCCTTTTTTGTTTA
ACATTAACACTGCAAAGCCAAAAGCCCCCACACGCCACACGCCCACCCGGAGAAAAGTCACACGACGCTATCACCCCGCA
GTCCCTTTGTCACCAGCTGTCCGGACACCGCATCCCTACCGCCGTCCCAAGCGCGTTCATACGCTTCAACCTCCAGCATC
ACGCATACCTATAAATGAGTATCCCACACTCTCGCTCAAGCTCAACAAGCATCTCACAATTAGCTCACGGCCTCACACTC
CTCACTGAGCTCAACCACCAAGCTCGACTGCTCAAGAAGAAGGCCACCTGCCAATCACCCAGCACTCTGCCGGTAGCCAT
GGACATGGGCCTTGAGGTCTCGAGCTCCTCCCCATCCTCCTCGTCGGTGTCGTCCTCGCCCGTGCACGCGGCGGGGCGGG
CGTCGCTGGCCAAGCGCCCCGCGGGGCGCACCAAGTTCCGGGAGACGCGGCACCCGGTGTACCGCGGAGTGCGGCGCCGA
GGCAACGCCGAACGGTGGGTCTGCGAGGTGCGCGTCCCCGGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTACGCCAC
GGCTGAGGTCGCCGCGCGCGCGAACGACGCCGCCATGCTTGCCCTGGGCGGCCGCTCCGCCGCGTGCCTCAACTTCGCGG
ACTCCGCGTGGCTGCTCGCCGTGCCGCCCGCACTCTCCGACCTCGGCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCG
GATTTCCAGAGGCGAGAGGCTGCCAACGGCTCCCTCACCGCCACCGTCACCGAAGAGGCCTCCTGTGGCGCTCCTGAAGA
ATCGTCGTCTGAGTCTGACAGTGCCGGTTCGTCGGAGACGTCGGAACCTTCTGCCGATGCAGAGTTCGAGGTGCCTGTCG
CAGTGGACACCGATATGTTCAGTAGGCTTGACTTGTTCCCGGAAATGGACCTGTGCTCGTACTACGCGAGCCTCGCGGAG
GCGCTGCTCGTGGACCCGCCGTCGACGGTGGCCATCATCGACTCGTACTGGGACAACGGCGA
>chr5B_269
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---------------------------------------------------GTCCTAGCCATGCAAAGGTCAAGTGTGCG
TTTACCTCATTGAGTC---ACCACAATTCAACAAAAACGCCCTCTATCTCCTTGAGCCC-AATTGCCTCGAACCAGATGG
TCGTAATTTGGCGCCATAGCTGTTCATGGTCACCGCCTCACCA---GTGCCTTCTGCGTCCAGATAACTTGGAGAAACAC
AGGACCCATTCAATAGT---------------------------------------------------------------
--------------------AACCATTGTATGCCCCTTCGAGCC--------TTCACTTTGTCAAGCGCCTACCAGCCGT
CGAACCCCATCCTCTAGTTCACTGTGTGAGAACTGGACGTAGCTCAGTTGGCAAGGCGCGGGAGTTCGCAGCCAGCCCAC
CAGGGTTCAAGTCTCGGCTTAAGCGTTTGTTGCTTACGGAGTTTTCTTCTATAAAAAATGTCAACAGGCTAGTCTAGCCC
GGTTAGTCCCTTTTTTTACTAGTTCACTGTGTTAAGCAAGCAGGAAGTTGCCTCTATTT-A-----ACACTGCAAAG---
---------------CCAG------CAGGAGAAAAGTCACATTACGCTATCAACGCGACTTAATTTAATCCTCCACGTAC
GGTCCCATCGTCACCAGCTGTTTGTACGCCGGCATCCCGACCGCTGTCTTCAGCGCGTTCATACAACTTCCAAGCTTCC-
AGCACAGCACACACCTATAAATACGT-CTCACACACTCCACGGAAGCTAGCAACC----------AACACTCTCACTCAA
GCTCA----------------------------CACTTCTCACCAAGCTCAAGCACCACCAAGCTCGACTGCTCAGAAAG
GAAG------------CACCGATCGCTCTGCCGGTTGCCATGGGCATGGGCCTTGAGATCCCGAGCTCCTCCCTCTCCTC
TTCCAA---------------CGAGAACGCGCCGGGGCGGGCGTCGGCGGCCAAGCGCCCGGCGGGGCGCACCAAGTTCC
GCGAGACAAGGCACCCGGTGTATCGCGGCGTGCGGCGCCGGGGCAACGCGGAACGGTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTACGCCACGGCTGAGATCGCAGCGCGCGCGAACGACGCCGCCATGCT
TGCCCTGGGCGGCCGCTCCGCCGCGCGCCTCAACTTCCCGGACTCCGCGTGGCTGCTCGCCGTGCCGTCCGCGCACTCCG
ATCTCGCCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCTGATTTGCAGCGACGGGAGGCTGCCGGTGGGTCCATCACC
G------------CCACCGCCGCCGAGGAGGCCTCCTGTGGCGCTCCTGCAGAATCGTCGTCTGAGTCTGACGATGCCGG
TTCGTCGGAGACGTCGAAACCTTCCGCCCATGGAGACTTCGCGGTGCCGGGCGGAATGGACATCGAAATGTTCAGTAGGC
ATGACTTGTTCCCGGAAATGGACTTGGGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTCATGGACCCGCCTCCGGTG
GCGACCGGCACCGGCGCGTACTGGGATAACGGAGAGTGCGGCGAGGCCGAGGGGGCAACTGAGTTCGCGCTCTGGAGCTA
GTAGCCGATTCTGC-TTTGTTTTGACTCTGTAGTCTTTTG-TTTTCCTTCGC----------------------------
-------AAAGTTTTCCTATTTCCGGAGAAGACTCTGTAA-------CTAACAAATTGATGCTGCTTGAAATCGAGCATT
CATTATGAAACACTTCTATGCAATTTCAAG---------------CTACCTG-AGACGTCAAAAATGCTAAACGCACGGA
CCGCACTAGGGGCTGTTAGACGTACTACATGCAAATATGCAATTTCAAGCTGTAAAAAGGAGCACGAATAGAAGTATG--
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--------GAACAAATCAAAGCAGTACATGAGGCGGCTTGGTAAGGA------------------TTCCAGAAAAAGGAA
ATATTCCTTCATGCAGCATGAGCTCAACAGGCACAGCAGGACCAGACGAGAGGGAGGCAACTTTCAGGGGATGTTGACAC
TTATTCGCAAC-----------GAGCAATCCAGAAGACGTGGTCCGATGTCATGTCTCCCATTAAAACCATTAAGCTACG
CGTGAAGGGTAGCCAACCAGCTATGCCACGTGGCGCAAATTGGTTGGTCGCGGTGAGGAATCTTTTGCAAATTTTTTTAG
ATGAAGGTGTGGATTATATTTTAAATATATATTTTTAGATGGAGATGAGGACCTCTGGTATATTTTAAATGAAGAGTTAT
GCAAAGTGGCACTCGCTGGTAGGCTGGTGTGGTAATTTTTTCTTTTTTCTTTTTTACCTTTTTTAGATAAATGTGAGGAT
TTTTTTTGAGATATTTTTTTAGACGGAGGCGAGGATTTTATGTATTTTTTAAATGAAAACGTGCGCACAACTTTCTCGCA
AGGGGCGCCCCAATCACTAGTCCGTCTATAACGTGTGGTCACTCGGGTTGATCTGGTCACGGGCCCAGCAGGTTAGAGCG
ACGAGAGCTCTGAATCTTCTTGACGCGTCTCCTGTCGAAATCTTTACAACTGAGCATGCCTT------------------
----------------CATTCAC---------------------------------------------------------
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>chr5B_640
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-----------------------------TGTTAAGCCAGCAGGAAGTTGCCTGTTTTTGTTTAACACACTGCAAAGCCA
AAAGCCCCCACACGCCCACCAGA------AGAAAAGTCACACGACGCTATCACCC------------------C----AC
GGTCCCTTTGTCACCAGCTGTCCGGACACC-GCATCCCTACCGCCGTCCCAAGCGCGTTGATACACTTCAAC--C-TCC-
AGCATCACGCATACCTATATATAAGT-CTCCCACACTC----------------------------------TCGCTCAA
ACTCAACAAGCATCTCACACTCCTCAG----------CCTCAGTAAGCTCAAG---CACCAAGCTCGACTGCTCAAGCAG
GAATCCACCAGTCAATCACCGAGCACTCAGCCGGTAGCCATGGACATGGGCCTTGAGGTCTCGAGCTCCTCCCCGTCCTC
CTCGTCGGTGTCGTCCTCGCCCGAGCACGCGGCGGGGCGGGCGTCGCTGGCCAAGCGCCCCGCGGGGCGCACCAAGTTCC
GGGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCCGGGGCAACGCCGAACGTTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTACGACACGGCTGAGCTCGCAGCGCGCGCGAACGACGCCGCCATGCT
TGCCCTGGGCGGCCGCTCCGCCGCGTGCCTCAACTTCGCGGACTCCGCGTGGTTGCTCGCCGTGCCGTCCGCACTCTCCG
ACCTCGGCGACGTCCGGCGCGCGGCGGTCGAGGCCGTGGCGAACTTGCAGCGACGAAAGGCTGGCAACGGCTCCC-----
-T------CACCGCCACCGTCACCGAAGAGGCCTCCTGTGACGCTCCTGAAGAATCGTCGTCTGAGTCTGACAGTGCCGG
TTCGTCGGAGACGTCGGAACCTTCAGCCGATAGAGAGTTCGAGGTGCCGGTCGCAGTGGACACCGATATGTTC---GGGC
TTGACTTGTTCCCGGAAATGGACCTGTGCTCGTACTACGCGAGCCTCGCGGAGGCACTGCTCGTGGACCCGCCGGCACGG
GTGACCACCACCGACACGTACTGGGACAACGGCGA---------------------------------------------
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>chr5B_821
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------------------------------------------------------------------TTCAAG--C-TCCA
A-CACGACACAAACCTATAAATACGTCCCCACACACTCCACAGATGTTAGTAACACCGATCACCGAACACTCTCACTCAA
GCTCAA---GCATCCCACGGC----TAAGCTCACACTCATCACTAAGCTCAAG---CACCAAGCTCGACTGCTCAAGAAG
GACGCCACCAGTCCGTCACCAAGCACTCCGGCGTTAGCCATGGACATGGGCATGGATCTTTCCAGCTCCTCCCCGTCCTC
GTCT---GTGTCATCCACGCCCGAGCACGCATCGGGGCGGGCGTCGCCGGCCAAGCGCCCCACGGGGCGCACCAAGTTCC
GGGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCAGGGGCAACGCGGGACGGTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGTGGCGCTCGGCTCTGGCTCGGGACGTACCTGACGGCCGAGGCCGCCGCCCGCGCGAACGACGCCGCCATGCT
CGCACTCGGCGGCCGCTCAGCAAGGTGCCTCAACTTCGCGGACTCGGCGTGGCTGCTCGCCGTGCCGTCCGCGCTCTCCA
ACCTCGCCGACGTCCGTCGCGCGGCCCTCCAGGCCGTCGCGGATTTCCAGCGACGGGAGGCTGCCAATGGCCTGATA---
---------GCCAGGACCGTCGCCAAGGAGGCCCCATCTAGCGCTCCTGCACAATCGTCGTCTGAGTCCGACAGTGCCGA
CTCGTCGGAGACGTCGGAAGCTTCCGCCGATGGAGAGTTCGAGGTGCTGGCTACAATGGACATCGATATGTTCAGTAGGC
TTGACTTGTTCCCGGAAATGGACCTGGGCTCGTACTACGTGAGCCTCGCGGAGGCGCTGCTCATGGACCCGCCGTCGACG
GCGGCCATCATGGACGCGTACTGGGACAACGGCGA---------------------------------------------
--------------------------------------------------------------------------------
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>chr5D_824
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------G--AAGC-TCC-
A-CATGACACATACCTATAAATACGT-CCCACACACTCCACAGATGTTAGTAACACCGATCACCAAACACTCTCACTCAA
GCTCAA---GCATCCCACGGC----TAAGCTCACACTCCTCACTAAGCTCAAG---CACCAAGCTCGACTGCTCGTT---
-----------------ACCGAGCACTCCGGCGTTAGCCATGGACATGGGCATGGATCTTTCCGGCTCCTCCCCGTCCTC
GTCC---GTGTCATCCTCGCCCGAGCACGCATCGGGGCGGGCGTCGCCGG-CAAGCGCCCCGCGGGGCGCACCAAGTTCC
GGGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCACGGGCAACGCGGGACGCTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGTGGCGCTCGGCTCTGGCTCGGGACGTACCTGACCGCCGAGGCCGCCGCCCGCGCGAACGACGCCGCCATGCT
CGCACTCGGCGGCCGCTCCGCCAGGTGCCTCAACTTCGCCGACTCGGCGTGGCTGCTCGCCGTGCCGTCCGCGCTCTCCG
ACCTCGCCGACGTCCGGCGCGCGGCCCTCCAGGCCGTCGCGGATTTCCAGCGACGGGAGGCTGCCAATGGCCTGATA---
---------GCCAGGACCGTTGCCGAGGAGACCCCATCTAGCGCTCATGCACAATCGTCGTCTGAGTCCGACAGTGCCGA
TTCGTCGGAGGCGTCGGAAGCTTCCGCCGATGGAGAGTTCGAGGTGCTGGCTACAATGGACATCGATATGTTC---AGGC
TTGACTTGTTCCCGGAAATGGACCTGGGCTCGTACTACGTGAGCCTCGCAGAGGCGCTGCTCATGGACCCGCCGTCGACG
GCGGCCATCATCGACGCGTACTGGGACAACGGCGA---------------------------------------------
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>chr5B_887
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------------------------------------------------------------------ACACTCTCGCTCAA
GCTCAACAAGCATCTCACAGC----T-AGCTCACACTCCTCACTGAGCT-AAG---CACCAACCTCGACTGCCCAAG---
GAAGCCACCTGCCAATCACCCAGCACTCTGCCGGTAGCCATGGACATGGGCCTTGAGGTCTCGAGCTCCTCCCCATCCTC
CT---------------------------------------CGTCGCTGGCCAAGCGCCCCGCGGGGCGCACCAAGTTCC
GCGAGACGCGGCACCCTGTGTATCGTGGCGTGCGGCGCCGGGGCAACGCCCAACGGTGGGTCTGCGAGGTGCGCGTCCCT
GGCAAGCGCGGCGCTCGGCTCTGGCTCGGGACTTACGCCACGGCCGAGATTGCAGCGCGCGCCAACGACGCCGCCATGCT
CGCCCTGGGCGGCCGCTCCGCCGCGCTCCTCAACTTCCCGGACTCCGCGTGGCTGCTCGCTGTGCCGTCCGCGCACTCCG
ATCTCGCCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCGGATTTGCAGCGACGGGAGGCTGCCGGTGGGTCCATCACC
GCCACCGCCACCGCCACCGCCGCCGAGGAGGCCTCCTGTGGCGCTCCTGCAGAATCGTCGTCTGAGTCTGACGATGCCGG
TTCGTCGGAGACGTCGAAACCTTCCGCCGATGGAGACTTCGCGGTGCCGGGCGGAATGGACATCGAAATGTTCAGTAGGC
TTGACTTGTTCCCGGAAATGGACTTGGGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTCATGGACCCGCCTCCGGTG
GCGACTGGCACCGGCGCGTACTGGGATAACGGAGAGTGCGGCGAGGCCGAGGGGGCAACTGAGTTCGCGCTCTGGAGCTA
GTAGCCGATTCTGCTTTTGTTTTGACTCTGTAGCGTCTTT-TTTCCCTTTGCAAAGTTTTCCAATTTCGTTTTTTCTTTT
GCGGGTGAAAGTTTTCCTATTCCGGGAGAAGACTCTGTAGGCCATAGCTAGCAAATTGAAGCTGATTGCAATGGAGCATT
CATTATGACACAGTTTTATGCCACTGTTTATACTCCGGTTCTTCTCTAGCTG-AGACGTAGCACACC-------------
--------------------------------------GCAGTTTCAAGCCGTAAAAAGGAGCACAAAAAGAA-------
--------------------------------------------------------------------------------
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-----------CAAATCCAAGCAGATACAGTAATACAACAAGAGGCGAGACGGC-TCGCAATGGGTTCTAGAAAAAGGAA
ATATTCCTTCATGAAGCATGAGCTCAACAGGCAAAGCAGAACCAGACGAGAGGGAGGCAACTTTCAGTCGATGTTAACCT
TTATTCGCAACGAGACGAGAGGGAGCAATCCAGAAGATGTGGTCTGATGTCATGTCTCCCATCC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------GTCTGTCTATAACGTGTGGTCACTCGGATTGATCTGGTCACGGGCCCAGCAGGTTAGAGCG
ACGAGAGCTCTGAATCTTCTTGGTGCGCCTCCTGTCGAAATCTTTGCAGCTAAGCAGGCCGT------------------
----------------CACCTTCACTCACAGACTCACTTTGAGCGGGACTAAGAT------GCAGCAGCACACTCTCACG
CGGGG---------------------------------------------------------------------------
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>chr5A_933
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------------------------------------TCCTCAGTAAGCTCAAG---CACCAAGCTCGACTGCTCAAGCAG
GAATCCACCAGCCAATCACCCAGCACTCAGCCGGCAGCCATGGACATGGGCCTTGAGGTCTCGAGCTCCTCCCCGTCCTC
CTCGTCGGCGTCGTCCTCGCCCGAGCACGCGGCGGGGCGGGCGTCGCTGGCCAAGCGCCCCGCGGGGCGCACCAAGTTCC
GGGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCCGGGGCAACGCCGAGCGGTGGGTCTGCGAGGTGCGCGTCCCC
GGCAAGCGCGGCGCGAGGCTCTGGCTCGGGACGTACGCCACGGCTGAGATCGCAGCGCGCGGGAACGACGCCGCCATGCT
CGCCCTGGGCGGCCGCTCCGCCGCGTGCCTCAACTTCGCGGACTCCGCGTGGCTGCTCGCCGTGCCGCCCGCACTCGCCG
ACCTCGGCGACGTCCGGCGCGCGGCGGTCGAGGCCGTCGCTGATTTCCAGAGACGAGAGGCTGCCAACGGCTCCCTCACA
GT------CACCGCCACCGTCACCGAAGAGGCCTCCTGTGGCGCTCCTGAAGAATCGTCGTCTGAGTCTGACAGTGTCGG
TTCGTCGGAGACGTCGGAACCTTCTGCCGATGGAGAGTTCGAGGTGCCGGTCGCGGTGGACACCGATATGTTC---AGGC
TTGACTTGTTCCCGGAACTGGACCTGTGCTCGTACTACGCGAGCCTCGCGGAGGCGCTGCTCCTGGACCCGCCGGCACCG
GTGACCACCACCTACGCGTACTGGGACAACGGCGA---------------------------------------------
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>chr5A_1063
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------------------------------------------------GGCCAAGCGCCCCGCGGAGCGCACCAAGTTCC
GGGAGACGCGGCACCCGGTGTACCGCGGCGTGCGGCGCAGGGGCAACGCGGGGCGGTGGGTGTGCGAGGTGCGCGTCCCT
GGCAAGCGTGGTTCTCGGCTCTGGCTCGGGACGTACCTGACGGCCGAGGCCGCCGCCCGCGCGAACGACGCCGCCATGCT
CGCACTCGGCGGCCGCTCCGCCAGGTGACTCAACTTCGCGGACTCGGCGTGGCTGCTCGCCGTGCCGTCCGCGCTCTCCG
ACCTCGCCGACGTCCGGCGCGCGGCCCTGCAGGCCGTCGCGGATTTCCAGCGATGGGAGGCTGCCAATGGCCTGGTA---
---------ACCAGGACCGCCGCTGAGGAGGCCCCATCTAGCGCTCCTGCACAATCGTCGTCTGAGTCCGACAGCGCCGA
TTCGTCGGAGACGTCGGAAGCTTCCGCCGATGGAGAGTTCGAGGTGCTGGCTACAATGGACATCGACATGTTC---AGGC
TTGACCTGTTCCCGGAAATGGACCTGGGCTCGTACTACGTGAGCCTCGCGGAGGCGCTGCTCATGGACCCGCCGTCGACG
GCCACCATCATAGACGCGTACCGGGA------------------------------------------------------
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--------------------------------------------------------------
>SNPs
----------S-S-------S------------------------S-S---------------------------S-S--
----S------------SS--------S-----S------------------------S-S----S-SS-----------
--------------S---------------S-----------------------------S---S-------S-------
----SSS--------S-----------SSS---SS----S-S------SS-------S----------------------
--------------S------S---------------S-------SSS------------------S---S----S---S
-S---------------S------S-S--------S--S---S-------------S-----------------------
-----S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS---S--------------------SSSSSSSS----------------------------
-S-------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------S-----S---------------------S-------
-----------------------------------------------------------------S-S------------
-------------S----------S-----------------------------------------------S-------
----------S----------SSSS-------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
----------------------S------------------------------S--------S-----------------
---------------------------S-----S-S---S----------------------------------------
------------------S---------------------------------------------------S---------
---------------------------S---------S--------------S--------------------------S
----------------S------------------------------SS-------------------------------
------------------------------------------------------------------------S-------
------S------------S--------------------------------------S---------------------
------------------------------------------------------------------S---S--S-S----
--------------------------------------------------------------------------------
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------------------------------------------------------S----------S--------------
-------------------------------------------S--------S------S--------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------S---------------------------------S-----
--------------------------------------------------------------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------------------S--------------------S-----------------------
-----SSSSS-------------------------------------------------S----S---------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S----------------------------------------S----SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S-------S------SS-S
SSSSSSSSSSSS----------SS----------S--S-S-S----------S-S-----------S----------S--
-S-----------SS----S------------------------------------------------------------
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>forward_418
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
CGGTAATTTGGCGCCATC--------------------------------------------------------------
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>reverse_1859
--------------------------------------------------------------------------------
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------------------CGGACTTGGGCTCGTACTAC------------------------------------------
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>forward_1142
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--AGCTCAAGTATCTCGCACCG----------------------------------------------------------
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>reverse_4167
--------------------------------------------------------------------------------
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------TGACCATTTCGCCTCCGATC------------------------------------------------------
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--------------------------------------------------------------
