>input_sequence_70691
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---------------------------------------------------ATGTCGAGCCGTAGATCTTGTGGCCT---
---GGTGCTCGCCTGCGCCGCCCTCATGGCGGCGGTGGCCGGCGCGGCGCAGTACAACGTCGGCGGCGACAACGGCTGGG
GCGTGCCCGGCGCCGGCGCCGAGTCCTACAACACCTGGGCCGAGAAGACCACCTTCCAGGTCGGCGACCAGCTCGGTACG
TAACCGCACGACCACCTTTCAT-----------------------TTTGCATCTCGGCGACGTGATTTTGATGTGTGTGT
GTGTGTGTGATTCATGCATGCATGCGTTGCGT--GTGCAGTGTTCGTGTACCCCAAGGACAAGGACTCGGTGCTGCTGGT
GGCGCCGGCCGACTACAACGCTTGCAACACCAACACGTACGACAAGCAGTTCACCGACGGCAACACCGTCTTCGACCTCG
ACCGCGCCGGCGCCTTCTTCTTCATCAGCGGCGTCGACGCCAACTGCCGCGCCAACGAGAAGCTCATCGTCATGGTCGCC
GCCGCCGCCAAGGGCGCTCCCACGCCCAGCCAGGGGTCACCCGCAGCAACAGCAACGACCCCGCCGTCTTCTCCCTCAGG
TGGCGCCCCGCCAAACTCCCCAGCAGCCCCAAATGCTCC---------GGCGGGTAACTCAACGCCGGCCAAGGACGCGC
CTCCTGGAGCCGCCAGCGGCGCCGGCCTCACGGTGGCAGGCCTCGCCGGCTCGTTCGCGGCATTGTTTGGATACGCCATG
CTTGCTTTCTAG--------------------------------------------------------------------
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-----------------------------------------
>chr6A_1_TraesCS6A01G137200
TGACGAAGGCCACCACTCGAGCACACATCACCTTCACCGTCACACAGCAACCCTCCAACACCTCCATCACAGGTTGCCCC
CGATCAATACCTCCCCGCCGTTGCGCCCTGTCCGCCGCCAAGAGGGGTAGGTGATCAACACCTTATTGTTCTTATTTTCA
TATCACTCCATTTAAAACTCATAGACATAATTTTACAGTAACATGCAACTGGAGTTTCACAAACGTTT-GCTATTTCGAA
TTTAGTAGTGTGCAACTGTAAGTCGCTGAGAACTTTTTTCGAATAGTAGGCAATTACTAAGATTTAGCAAAAGCTAGTCG
AAAACCGGAAAAT-ATATGAAAACACAG-TGACCTATGAAAAAGCTGGAAAGACATTCCTTGC-----------------
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------------------------TGTTTAAAAATGAAGGGAAAAGGATTAGAGTCATTATGCCTCTTGTAAGTCAAAAG
TGTTA-TTCTTCTTTCAAATTAAAGAGTGTAAACAGCTTTGGTAGATCGATCTGTCTTGTGTAGATGTGCGTTGATCTTC
TCC-TACTATACATCAATCACCAAGTCACCGCTAGCCCAG--GGTGCAAAAGTACAGACCGTTGCACCTGACCCGACCAA
TGGCACCAGCCAGCCATCACGTCGCGTGGATCCCAACGTTCACAAGCTAAGCCACGACGCCGATATTCCGGGTGCAAGTG
CAACCGGCAAAGCATCGATTCGAAA-------GGCACACAGCACGCACGCATGCACGCACGCAGTCGCAATGGGGTGGCA
CAGGGGCGCGCCGCACGAAAAAGGAGACAGACCACCGGCACGTGCATGCCTCCTCCTCTACGT-----------------
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-AGTAGTACGTAGCTTGAGGCGACCGCCAAAAGCAAGGCAC-CCACAGCGTGTAAAGCCGGCCTGCTCGATCAGCTCACG
TACGCGGCATGCATGTGCCTACGACTACAAATACGTACGTACCCCGGCCGCCTA-------------TACCCATCGACCA
ATACAAGCATCATCG-AGAGTGCAGTTTCTA---CTTTGTACTAGCTAGCAATGTCGAGCCGTAGATCTTGTGGCCT---
---GGTGCTCGCCTGCGCCGCCCTCATGGCGGCGGTGGCCGGCGCGGCGCAGTACAACGTCGGCGGCGACAACGGCTGGG
GCGTGCCCGGCGCCGGCGCCGAGTCCTACAACACCTGGGCCGAGAAGACCACCTTCCAGGTCGGCGACCAGCTCGGTACG
TAACCGCACGACCACCTTTCAT-----------------------TTTGCATCTCGGCGACGTGATTTTGATGTGTGTGT
GTGTGTGTGATTCATGCATGCATGCGTTGCGT--GTGCAGTGTTCGTGTACCCCAAGGACAAGGACTCGGTGCTGCTGGT
GGCGCCGGCCGACTACAACGCTTGCAACACCAACACGTACGACAAGCAGTTCACCGACGGCAACACCGTCTTCGACCTCG
ACCGCGCCGGCGCCTTCTTCTTCATCAGCGGCGTCGACGCCAACTGCCGCGCCAACGAGAAGCTCATCGTCATGGTCGCC
GCCGCCGCCAAGGGCGCTCCCACGCCCAGCCAGGGGTCACCCGCAGCAACAGCAACGACCCCGCCGTCTTCTCCCTCAGG
TGGCGCCCCGCCAAACTCCCCAGCAGCCCCAAATGCTCC---------GGCGGGTAACTCAACGCCGGCCAAGGACGCGC
CTCCTGGAGCCGCCAGCGGCGCCGGCCTCACGGTGGCAGGCCTCGCCGGCTCGTTCGCGGCATTGTTTGGATACGCCATG
CTTGCTTTCTAGTACTGCTTTCCAAACCTATCTTTCACTGCTCCTTTTCAAAGCCGGGAAACTATTTGCTCCTTTTCAGA
GGGCAATGTGTCTCTCTGCTCAGATTCTTTTCCGTTATGGTCAATGACAAATGCAATATGATGGTTCCTGAATGAGATAG
CACTCAGCATTGGCATTCCAGCACAACATATTATCAGATATATTACTAATAAGAGCCAACCATA----------------
--------------------------------------------------------------------------------
---------------TTATCAGAAACCATAATAA-GGCATGTTCGGACTAGAATATTTTTTGCATAAATACACGATCAGA
GATGGTCTGAAGCGAAGCACAGCTCTGAAACTGACAGTAAACAAATCC---GAACTTGGAGTAAACTGATCGGCAACTAC
ATAGGATCTAT---AAGGCTATTCGAACACCGAATTCTCGATCACGGCCATGAGAGACGATGAAAAAGAAGGCGTCTACA
GCCTCCTTCCTCTCCTACCACCCTTTCTGCGGGTGCTGTCAGTGGGAACGGGGGTCACGTCCTCTGCAAAGAGAATCAGA
CATACAATTATTAGTTCTATGCCCAATAAGGACGAGACCACAATGAAACAGCAAA-------------------------
------GTAACAAGATATGTGTTCTTCATTTGCATATATGCGGCGGGAAGTCAGAATTTACCAATGCGTCCAATTTTCAT
GCCAGAACGAGCGAGTGCCCTGAGAGCGGATTGAGCACCAGGTCCAGGAGTCTTGGTCTTGTTGCCTCCAGTGGCACGGA
GCTTAATGTGCAAAGCAGTGATGCCGAGCTCCTGGAAGCGCGAGTGGAAAACATATAAGAATCCTGGATGTAGGCACCTG
AACAGAAAATAGTCCAATGAAAGCCCATACAAACCTTGCAACGTGTCGCCACATCTTGAGAAGCAAGCATAGCTGCATAT
GGTGATGACTCGTCACGATCAGCCTTGACCTTCATTCCACCTGCATTGATTATGGGACAATCAAATTTACTTTTAAACCA
TAAAAAATATAGCTAGATCACGAAAAGAAAATTTAAGTATG
>chr6B_1
TGATGAAGGCCACCACTCGAGCACACATCACCTTCACCGTCACATAGCAACCCTTCAACACCTCCATCACAGGTTGCCCC
CGATCAATACCTCCCCACTGTTGCACCCTGTCCGGCACAAGAGTGGTTAGGTGATCAACACCTTATTGTTCTTATTTTCA
TATCATTCCATTTAAAACTCAAAGACATAATTTCACAGTAACATGCAACTGGAGTTGCACAAACGTTTTGCTATTTTGAT
TTTAGTATTGTGCAACCGTAAGTCGCTGAGAACTTTTTTCAAATAGTAGGCAAGTAAGAT--TTTAGCAAAAGCTAGTCG
AAAACCGAAAAGAAATATGAAAATACAACTGACCTATGAAAAAGCTAGATAGACATTCCTTTATCTTTACCTAATAATAA
AGCAAATTTGGCTTCGGTCGTCCGTCATGGCATTTTTTTTAAAAGTCCCTGTGTTTTGATGAAATCAACCCGCGGTTCGG
ATTTAAGTCACACCCGAACCGTTATTTTATATTTTTTGAAAAAAAAACCTGATGTTTTAGGTAATTCATGCGCAGATCAT
ATCTAAGTCAAACAAATATTTTTTTAAATCATCCATATCTTTTAAACCGTAACTCCGATTTAAACATGTTATGTATGAAA
TTTGATTAGAAAAATATGTAGAATATGAATATGAGATTATTTTTACCTGTTAAGTATTTTAAATATTATTTTAGAATATA
TTTAAGTCAAACAAATGATTTTCTAAATTATTCGTATCTTTTAAACCGTAACTTCGATTTTAACATATTATATATGAAAT
TTTATTAGAAAAATGTGTGGAATCGAAATATGTTGTTAATTTTACCTTTAAATATTTTTAAAATATTGTTTTGGAAGCAA
ACTTATAATTTATAGCGCAAGATCCATTCTTTTTCATACCGGCGGCGATCCGGATTACAAATAAACACCCCACTATAACC
ATATAGGGAAAAGAAAACATCTCTAACTATACATACATACCTCTGAAAAATGTCACATGGGAAAACAATAGATTTCTCAT
CGCGGGAGTGAGAAATAGCGAGAGAGAGAGAGGGAGAGAGAGACGCCTTAGGATTAATCATATTCAAACACGTTTTTGTT
TTGTTTTGTGTGAACACCGAGACCATCACCGGTGAGGGTGAGAAGGAGGATAAGCGACAACACAAATATGATGCCTCGTA
AAAATAAAGAAGATGGACCTATTGTGGTCTTGAGTGATGGTTGTTGGGTTAAGAGCATGTCTTATGTTTTCTCTTCCCTT
GCAACGCACGGGCTCTTTTGCTAGTGATTAAAAATGGTGAAAAAAGGAATAGAGTCATTATACATCTTGTAAGTCAAAAG
TGTTACTTCTTCTTTCAAATTAAAGAGTGTAAACAGCTT--GTAGATCGATCTGTCTTCTGTAGATGTGCGTTGATCTTC
TCCTTACTCCACATCAATCACCAAGTCACCATTAACCCAGGTGGTGCAAAACTACAAACCGTTACAGCTGACCCGACCAA
TGGCACCAGCCAGCCATCACGTCGCGTGGATCCCAACGTACACAAGCTAAGCCACGACGCCGATATTCCGGGTGCAAGTG
CAGCCGGCAAAGCATCGATTCGAAA-------GCCACAC-GCACGCACGCATGCACGCA----GTCGCAATGGGGTGGCA
CAGGGGCGCGCCGCACGAAAAAGGAGACAGGCCACGGGCACGTGCATGCCTCCTC-------------------------
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>chr6D_554
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---------------------------------------G--GGTGCAAAACTACAAACCGTTACACCTGACCCGACCAA
TGGCACCAGCCAGGTATCACGTCGCGTGGATCCCAACGTTCACAAGCTAAGCCACGACGCCGATATTCCGGGTGCAA---
---CCGGCAAAGCATCGATTCGAAACTCAAAAGGCACACAGCACGCACG----CACGCA----GTCGCAATGGGGTGGCA
CAGGGGCGCGCCGCACG-AAAAAGAGACAGACCACCGGCACGTGCATGCCTCCTCTACGTACTCTCTCCGTTCAAAATTA
CTTGTCACAGAAATGAATGTATTTAAATATATTTTAATTCTAAATACATCTATTTTGATACAAGTGATTCCAAACGGAGG
GAGTAATACGTAGCTTGAGGCGACCGCCAAAAGCAAGGCACCCCACAGCGTGTAAAGCCAGCCTGCTCGATCAGCTCACG
TACGCGGCATGCATGTGCCTACGGCTACAAATACGTACCCGATCTCTCGACA--------------------------CA
ATACAAGCATCT----AGAGTGTAGTTTGTAGTACTTTGTA---GCTAGCCATGTCGAACCATAGATCCTGTGGCCT---
---GGTGCTCGCCTGCGCCGCCCTCATGGCGGCGGTGGCCGGCGCGGCGCAGTACAACGTCGGCGGCGACAGCGGATGGG
GCGTGCCCGGCGCCGGCGCCGAGTCCTACAACACCTGGGCCGAGAAGACCACCTTCCAGGTCGGCGACCAGCTCGGTACG
TAACTGCACGACCGACCTGGACGATCGATCCAAGTTTGCATTTCATTTGAACTTCGGCGACGTGATTTTGATGTGCGTGT
GT--GGTT--------CATGCATGCATGCGTCGCGTGCAGTGTTCGTGTACCCCAAGGACAAGGACTCGGTGCTGCTGGT
GGCGCCGGCCGACTACAACGCCTGCAACACCAACACCTACGACAAGCAGTTCACCGACGGCAACACCGTCTTCGACCTCG
ACCGCGCCGGCGCCTTCTTCTTCATCAGCGGCGTCGACGCCAACTGCCGCGCCAACGAGAAGCTCATCGTCATGGTCGCC
GCCGCCGCCAAGGGCGCTCCCACGCCCAGCCAAGGGTCGCCTGCAGCAACAGCAACGACCCCGCCGTCTTCTCCCTCGGG
TGGCGCGCCGCCAAACTCCCCAGCAGCCCCAAATGCTCC---------GGCGGGTAACTCAACGCCGGCCAAGGACGCGC
CTCCTGGAGCCGCCAGCGGCGCCGGTCTCACGGTGGCAGGCCTCGCCGGCTCGTTCGTGGCATTGTTTGGATACGCCATG
CTTGCTTTCTAGTACTGCTTTCCAAAGCTATCTTTCACTGCTCCTTTTCAAAGCCGGGAGACTATTTGCTCCTTTTCAGA
AGGCAATGCGTCTCTCTGCTCAGATTCTTTTCCGTTATGATCAATGACAAATGCAATATGATGGTTCCTGAATGAGATCG
---------TTGGCATTCCAGCAG--------------------------------------------------------
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---------TATTACTTATCAGAAACCATAATAAAGGCATGTGCGGACTAATAC---TTTGGCATAAATACACGACCAGA
GATGATCTGAAGTGAAGCACAGCTCTGAATTAAGCGACAGTCAAATATTCTGAACTCAGAGTAAACTGACGGGCGACTAC
ATAGGATCTATAATAAGGCTACTCAAACTGCAAATTCTTGATGACGACCATGAGAGACGATGAAAAAGAAGGTGTCTACA
GCCTCCTTCCTCTCCTGCCGCCCTTTCTGCGAGTGCTGTCAGTGGGAACAGGGGTCACGTCCTCTGCAAAGAGAATGAGA
CATACCATCATTAGTTCTATGCCCAATAAGGGTGACACCACAATGAAACAACAAAGTACTCTTGGACCCGCTGTCCATGA
AGGGGGGTAACAAGATATGTATTCTTCATTTGCATATATGCAGCGGATGC-CAGAATTTACCAATGCGTCCAATTTTCAT
GCCAGAACGAGCGAGTGCCCTGAGAGCGGATTGAGCACCAGGTCCAGGAGTCTTGGTCTTGTTGCCTCCAGTGGCACGGA
GCTTAATGTGCAAAGCAGTGATGCCAAGTTCCTGGAAGCGCAAGCACAAAATATATCAGAATCCTGTAGGCACCCA----
AACAGAAAATAGTCCAATGAAAGCCCATACAAACCTTGCAACGCGTCGCAACATCTTGAGAAGCGAGCATAGCTGCATAT
GGTGATGACTCATCACGATCAGCCTTGACCTTCATTCCACCTGCATTAATTAGGGGCCAATCAGATTTATTTTTAAAACA
T-AAAAATATAGCTCAACCACTAAAAGAAAATTTAAGTA--
>chr6B_814
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------TACGTAGCTTGAGGCGACCGCCAAAAGCAAGGCACCCCACAGCGTGTAAAGCCGGCCTGCTCGATCAGCTCATG
TACGCGGCATGCATGTGCCTACGACTACAAATACGTACCCATGGCCGCCTCCAGAGAATGTGTATACTACCCATCGGCCA
ATACAAGCATCATCGAAGAGTGCAGTTTCTA---CTTTGTA---GCTAGCCATGTCGAGCCATAGATCTTGTGGCCTGGT
GGTGGTGCTCGCCTGCGCCGCTCTCATGGCGGCGGTGGCCGGCACGGCGCAGTACAACGTCGGCGGCGACAACGGGTGGG
GCGTGCCCGGCGCCGGCGCCGAGTCCTACAACACCTGGGCCGAGAAGACCACCTTCCAGGTCGGCGACCAGCTCGGTACG
TGACTTCCTGCTGCTTGCA------------------------CATTTGCATCTCGGTGACGCGACTTTGATGCGTGTGT
GTGGGGTT--------CATGCATGCATTGCTT--GTGCAGTGTTCGTGTACCCCAAGGACAAGGACTCGGTGCTGCTGGT
GGCGCCGGCCGACTACAACGCCTGCAACACCAACACCTACGACAAGCAGTTCAGCGACGGCAACACCGTCTTCGACCTCG
ACCGCGCCGGCGCCTTCTTCTTCATCAGCGGCGTCGACGCCAACTGCCGCGCCAACGAGAAGCTCATCGTCATGGTCGCC
GCCGCCGCCAAGGGCGCTCCCACGCCCAGCCAGGGGTCGCCTGCAGCAACAGCAACGACCCCGCCGTCTGCTCCCTCAGG
TGGCGCCCCGCCAAACTCCCCAGCAACCCCAAATGCTCCGGCGGGTGAGGCGAGTAACTCAACGCCGGCCAAGGGCGCAC
CTCCTGGAGCCGCCAGCGGCGCCGGTCTCACGGTGGCAGGCCTCGCCGGCTCGTTCGTGGCATTGTTTGGATACGCCATG
CTTGCTTTCTAGTACTGCTTTCCAAAGCTATCTTTTACTGCTCCTTTTCAAAGCCGGAAGACTATTTGCTCCTTTTCAGA
GGGCAA--CGTGTCTCTGCTCAGATTCTTTTCCGTTATGATCAATGACAAATGCAATATGATGGTTCCTGAATGAGATAG
CACCTAGCATTGGCATTCCAGCAG--CATATTATCAGATAGACTCCCTCCATAAGGAAATACTTGTCGGAAAAATGGATA
ACACATCTTCTTTTATCCATTTTGATGACAAGTATTTCCGGACGAAGAGAGTACATCCATTTCTTCGACAAGTATTTCCG
GACAGGGAGTATTACTTATCAGAAAGCATAATAAAGGCATGCGCGGACTAATAC---TTTCGCATAAATACACGACCAGA
GATGTTCTGAAGCGAAGCACAGCTCTGAATTAAGCGACAGTCAAATATTCTGAACTCGGAGTAAACTGACGGGCGACTAC
ATAGGATCTATAATAAGGCTATTCAAACTACAAATTCTTGATGACGACCATGAGAGACGATGAAAAAGAAGGCGTCTACA
GCCTCCTTCCTCTCCTGCCGCCCTTTCTGCGAGTGCTGTCAGTGGGAACAGGGGTCACGTCCTCTGCAAAGAGAATGAGA
CATACCATCATTAGTTCTATGCCCAATAAGGGTGACACCACAATGAAACAGCAAAGTACACTTGGACCCGCTGTCCATGA
AGGGGGGTAACAAGATATGTATTCTTCATTTGCATATATGCAGCGGATGC-CAGAATTTACCAATGCGTCCAATTTTCAT
GCCAGAACGAGCGAGTGCCCTGAGAGCGGATTGAGCACCAGGTCCAGGAGTCTTGGTCTTGTTGCCTCCAGTGGCACGGA
GCTTAATGTGCAAAGCAGTGATGCCAAGTTCCTGGAAGCGCAAGCACA---TATATCAGAATCCTGAAGGCACCCA----
AACAGAAAATAGTCCAATGAAAGCCCATACAAACCTTGCAACGCGTCGCAACATCTTGAGAAGCGAGCATAGCTGCATAT
GGTGATGACTCATCACGATCAGCCTTGACCTTCATTCCACCTGCATTGATTAGGGGACAATCAGATTTATTTTTAAACCA
T--AAAATATAGCTCAACCACTAAAAGAAAA----------
>SNPs
---S----------------------------------------S---------S-------------------------
----------------S-S-----S---------S-S-S-SSSS--S---------------------------------
-----S---------------S-----------S----------------------S-------------------S--S
-------S--------S-----------------------S------------S--SS-SSS------------------
-------S---SS----------S---S------------------S--S-----------SS-----------------
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--------------------------S---------SS-SS-------S------------S-S----------------
---------------------------------------SS-----------------S---------------------
--------SS--------------------SS--S----------------S----S------S----------------
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--S--------------------------------------------------------SSSS-----------------
-------------------------------------------------------SS-SSSS------------------
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-----S--------------------------------------------------------------------------
--------------------------------------SS-SS--S---S--SS----------------------S---
-----------------------------------------SSS------S----------S------------------
---------------------------------------------------------------------------S----
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----S--------SS-S-SS-S----------------------------------------------------------
---S-SS-SSSSSSSS---------S----S-------------------------------------------------
---------------------S--------------S-------------------------------------------
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--------------------------------------S--S--------------------------------------
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-------------------------S-------------------------------S----------------------
--------------------------S--------------------------------S--------------------
--------S------------------------------S----------------------------------------
---SS------------------SSS--------------S-S-S-SSSS-SS--SS--SSS-S----------------
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------------------------------------------S-------SS-SSSS---S--------------S----
----S------------------------SSSSS-SSS-SS-----SS--------S------------SS---S-----
------------------------S---SS-S------S---S---S---------------------------------
----------------S--S-----------S-----------------S--------------------------S---
-----S--S----------------------SS--S--------------------------------------------
--------------------S--------------------S----SSSSS-----------------------------
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-------------------------S--S------------S--SSS----S----S---------S-S-S-SS--SSSS
-------------------------------------------S-----S--------------S---------------
-----------S----------------------------------------S----------S-----S----------
-S------------SS-S---S-----------------SS
>forward_1741
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-----------------------------------------GTGCATGCCTCCTCCTCTAC-------------------
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>reverse_3852
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-----------GTCACGATCAGCCTTGACCT-------------------------------------------------
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