>input_sequence_70641
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-----------------------------------------ATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGAT
CAGGTGTCCGAGATCAGCAGCCAGGCGGCGTCCAACAACAACGAGGC---------------G---------------TC
CAACACCTCCTCCGGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGGCCGCCGCCGCC---GCCACCACGA
CCGCCGAGTCGAGCACCACCGACAGCAACAACGGCGGCGGGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAAC
TACTGCCAGAGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGGCCCGGCGCGCGGTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTC
TACGGCTCCCCCGGGCTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCAGGGC------GCGGCGGCGCAGGC
GGAGCGGCAGCAGCACCAGCA------GCAGGACGCCGCGGTCCTGGCAG---CGCCGGCGCGCGCGCGGG--CGCTGCT
GGGCCCGATGCCGTTCCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCGCCACCGG
GCGCCGGCGTGCTCCCCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCGTCGTGGTGCA
AGCCGACGAGGAGCCCGACCTGACGCTTAGACTCTAG-------------------------------------------
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>chr4D_1_TraesCS4D01G230300
TTGTTCAGCTTATTTGTAATGCAGTCTGGTAGT---GGTGATCTGGTGATATCTGCAATGGCATGGACAAAAACAAGTCC
AACCT-----AGTGGTCTTCAGAAACACTGGTATCAGATCACTTGTAGCAGGCACATCAAAA-CACCACCAGGGAAGTCT
TGTTTCTTGGGCCTCTTTGACAAAACAAAAAAGCATTCTCTGTCGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCG
TGCTCTCA---------TCAGATCTCCAGAAACACCACA-GGGATTTGGATGGGAACACCAGGGCTTCCATCTTTTCATG
ACAACAACTGAATGTGCTATTCCTGGACCCTTTC----CTTTCAGATAAGGTTCCGTTTTAGAGATTCCCGGAGCAGAAA
AGAGGCCACGCTTTTCATCTGTTTGTCCTCTGATTTGGCATCAGACGTAGCATATCCAGGCTTAGCAATGGATCGGATAC
TTGTCTTGATCTGCCTGCACTCCACATTCAGACACATTCAGTTATTGAGCACACATGAAGCTTGAAAAATTCTGCTTCTG
CTCCTCTAGCAGCCCTTTAGTCATCTGGATAAATCTGAAC---TTGCTTAGATTCCTAAATCGACAGCATAATGAACTGT
CGTCTTCGGAATCACGTAAGCCGGAAGCAATTTCGGAGAACAAAAGGTGTGTCAATTCAGACTCCATAGTGCTTATCCAC
AGGGCTATCTGATTGCAAGCACTCCCATTTGTAAGATTCAGTTTGCCATGATCATCACACTGACAAGAGCAACACATGCT
ATTTTATCCTTGTACA--------------------ACTGTGGTGAGTGAGTCAATGAGTGCAGCTGAGACTAGAAACAA
GCGATCCTTTTCAGTTTG-TGCATCA--------------------------AATCATCTCACCAAGTACAGAAGAACAC
ATGCACTTGCTTACATGACTTGGCTTGTTCTC--------TGGACGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAA
AGCGCAACGAAAGAAAACAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGAT
CAGGTGTCCGAGATCAGCAGCCAGGCGGCGTCCAACAACAACGAGGC---------------G---------------TC
CAACACCTCCTCCGGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGGCCGCCGCCGCC---GCCACCACGA
CCGCCGAGTCGAGCACCACCGACAGCAACAACGGCGGCGGGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAAC
TACTGCCAGAGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGGCCCGGCGCGCGGTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTC
TACGGCTCCCCCGGGCTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCAGGGC------GCGGCGGCGCAGGC
GGAGCGGCAGCAGCACCAGCA------GCAGGACGCCGCGGTCCTGGCAG---CGCCGGCGCGCGCGCGGG--CGCTGCT
GGGCCCGATGCCGTTCCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCGCCACCGG
GCGCCGGCGTGCTCCCCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCGTCGTGGTGCA
AGCCGACGAGGAGCCCGACCTGACGCTTAGACTCTAGCCGCCATCCGTACGC----CGTCCATCGCTGCGCTTATACTAC
GTACTAGGTTGGTGCAACTCGTCAGGCTCCCGACGCCGATCAACAGATC---ATGGTGGTAGACGACCCGTATTTGTTTC
ATGCGTGCGTGGGTACGTACGTACGTACGCTCGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAG
TAGCGTGTAC----CCTACAACTTCCCGCGGTATATTAAAGATTCATGTGATCAATC--AATCATGTTGCTGTGTCCA--
-----TGAACTCCAGAATGTTTTTT--CCCTTTTCCTTGCTAATAATGTTGTCGTGTGAGACTTCCCGTCCCGGCCAGTG
CGGCGTCGACACGCCTCCCGCGCCGTCGCTCTCGGCGGCGGAGCCGGAGTAGTACAACGGTGAGCGACGGGTCGGGGTCG
AGGCCATCGCTGCTGCTGTCGGACCATGATGTGCTAACAGGAGTTGCAGCCTGTAGCTGTGGCCAGGATCAG-----GGC
CAACAACCGAACAAGAAAATCCACGCGGGATCACAACGCGCACACCAACAGTG------------------------AAA
AAACATCGAAAAAGAGAGGAGAAAATGACAAGCTGGGAAGTTGAAATATTCCCATGACGACGATGCCAATTATAGCATAG
CA---TAACATGGCATGGGGCGAAATGCACAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATGAGCAAG
CAACGAACTGAAAATGCTGTCAAGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTT-A---TAACAACGGTTAAC
AACGGGTAGTAAAAAAGAGCAAATTACAGATGGAACACAACAGCTTTGGTTTAGAAACCATTCCACTCTAATGGACAACA
ACAGCAACGCATCTCCAGGCATTCAGGAGCAGCAGGCGGTGA--TTTTTTGTTTTTTTACCGGGTTTCCTCTCTACACCC
ACATCTTCTTTGTGGCCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCC
>chr4A_1
TTGTTCAGCTTATTTGTAATGCAGTCTGGTAGTAGTGGTGATCTGGTGATATTTGCAATGGCATGGACAAAAACAAGTCC
ATGCCAATCAAGTGGCCTTCAGAAACACCAGCATCAGATCACCTGTAGCAGGCACATAAAAAACACCACCAGGGAAGCCT
TGTTTCCTGGGCCTCTTTGACAA-----AAAAGCATTCTTTGTTGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCG
TGCTCTCA---------TCAGATCTCCAGAAACACCACAGGGGTTTTGGATGGGAACACCAGGGCTTCCATCTTTTCATG
ACAACAACTCAATGTGCTATTCTTGGGCCCTTTTCTTTCTTTCAGATAAGGTTCCGTTTTAGAGATTCCCGGACCGGAAA
AGAGGCCACGCTTTTCATCTGTTTGTCCTCTGATTTGGCATCAGAGGCAGCATATCCAGGCTTAGCAATGGATCGGATAC
TTGTCTTGATCTGACTGCACTCCACATTCAGACACATTCAGTTATTCAGCACACATGAAGCTTGAAAAATTCTGCTTGTG
CTCCTCTAGCAGCCCTCTAGTCATCTGGATAAATCTGAACTATTTGCTTAGATTCCTATTTCGACAGCATAATGAACTGT
CGTCTTCGGAATCACGTAAGCCCGAAGCAATTTCGGAGAACAAAAGGTGTGTCAATTCACACTCCATAGTGCTTATCCAC
AGGGCTGTCTAACTGCAAGCACTCCCATGTCTAAGATTCAGTCTGTCATGATCACCGCACTGACAAGAGCAACACATGCT
ATTTTATCCTTGTACA--------------------ACTGTGGTGAGTGAGTCAATGAGTGCAGCCGAGACTAGAAACAA
GAGATCCTTTTCAGTTTTATGCATCA--------------------------AATCATCTCACCAAGTACAGAAGAACAC
ATGCACTTGCTTACATGACTTGGCTTGTTCTC--------TGGACGCATGCAGGTGAGAGATAGATAAAGGAGCAAACGA
AGTGCAGCGAGAGGAAGAAGACAGGGAGAGATTGTTCAGAGATGAAGAGCGGCAGCGGCGTCCAAGAAGCGTGTGAGGAT
CAGGTGTCCGAGATCAGCAGCCAGGCGGCGTCCAACAACAACGAGGC---------------G---------------TC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGA---CCGCCGCC---GCCACGACGA
CCGCCGAGTCGAGCACCACCGACAGCAAC---GGCGGCGCGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAAC
TACTGCCAGAGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGGCCCGGCGCGCGGTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTC
TACGGCTCCCCCGGGCTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCAGGGC------GCGGCGGCGCAGGC
GGAGCGGCAGCAGCACCAGCACCAGCAGCAGGACGCCGCCGTCCTCGCGGCCACGCCGGCGCGCGCGCGGG--CGCTGCT
GGGCCCGATGCCGTTCCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCGCCGCCGCCGG
GCGCCGGCGTGCTCCCCCTCCTCCACTCCGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCGTCGTGGTGCA
GGCCGACGAGGAGCCCGACCTCACGCTTAGACTCTAGCCGCCGCCCGTACGC----CGTCGATCGCTACGCCATTACGTA
CTGCTAGGTTGGTGCAACTCGTCAGGCTCCCGACGTCGATCAACGGACCATGATGGTAGACGACGACCCGTATTTGTTTC
ATGCGCGCGTG----CGTACGTAGGTACGCTCGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAG
TAGCGTGTACCCTACCTACAACTTCCCGCGGTATA---AAGATTCATGTGATCAATCAAAATCATGTTGCTGTGTCCA--
-----TGAACTCCAGAATGTTTTTTTTCCCTTTTCCTTGCTAATAATGCTGTCGTGTGAGACTCCCCGTCCCGGCCAGTG
CGGCGTCGACACGCCGCCCTCGCCGTCGCTCTCGGCGGCGGAGCCGGAGTGGTACGACGGTGAGCGACGGGTCGAGGTCG
AGGCCATCGCTGCTGCTGTCGGACCATGATGTCCTAACAGGAGTTGCAGCCTGTAGCTGTGACCAGGATCAGGGCCAGGC
CAACAACCGAACAAGAAAATCCACGCGGGATCACAACGCGCACACCAACAGTGTGGCCTGACCTGCCCAGGGAG----AA
AAACATCGAAAAAGAGAGGAGAAAATGACACGCTGGGAAGTTGAAATATTCTCATGACGACGATGCCAATTGTAGCATAG
CATAGTAGCACAGCATGGGGCTGAATGCAGAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATAGGCAAG
CAATGAACTGAAAATGCTGTCAAGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTTTA---TAACAACAGTTAAC
AACGGGTAATAAAAAAGAACAGATTACAGATGGAACACAGCAGCTTTGGTTTAGAAACCATTCCACTCTAATGGACAACA
ACAGCAACGCATCTCCAGGCATTCAGGAGCAGCAGGTGGTGA--TTTTTTGTTTTTTTACCGGGCTTCCTCTCTACACCC
ACATCTTCTTTGTGGCCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCC
>chr4B_1
TTGTTTAGCTTATTCGTAATGCAGTCTGGCAGTAGTG---ATCTGATGATATTTGCAATGGCATGGACAAAAACAAGTCC
AACCT-----AGTGGTCTTCAGAAACACTGGTATCGGATCACTTGTGGCAGGCACATAAAAAACACCACCAGGGAAGTCT
TGTTTGTTGGGCCTCTTTGACAAAACAAAAAAGCATTCTCTGTTGGTGAATTCGGCGTAGCTGTCCAGCATTTATATTCG
TGCTCCCATCTGACGATTCAGATCTCCAGAAACACCACAGGGG-TTTGGATGGGAACACCAGGGCTTCCATCTTTTCATG
ACAGCAACTGAATGTGCTATTCCTGGACCCTTTTCTTTC----AGATAAGGTTCCGTTTTAGAGATTCCCAGACCAGAAA
AGAGGCCACGCTTTTCATCTGTTTGTCCTCTGATTTGGCATCAAAGGTAGCATATCCAGGCTTAGCAATGGATCGGATAC
TTGCCTTGATCTGTCTGCACTCCACATTCAGACACATTCAGTTATTCAGCACACATGAAGCTTGAAAAATTCTGCTTGTG
CTCCTCTAGTAGCCCTTTAGTCATCTGGATAAATCTGAACT---TGCTTGGATTCCTAAATCGACAGCATAATGAACTGT
CGTCTTCGGAATCACGTAAGCCGGAAGCAATTTCGGAGAACAAAAGATGTGTCAATTCAGACTCTGTTGTGCTTATCCAC
AGG-----------GCAAGCACTCCCATTTCTAAGATTCAGTTTGTCATGATCTCCACACCGACAATAGCAACACATGCT
ATTTTATCCTTGTACAACAACTCAGGACTCATCTGCACTGTGGTGAGTCAGTCAATGAGTGCAGCTGAGACTAGAAACAA
GAGATCCTTTTCAGTTTTATGCATCAAATCATCTCACCAAGTACAGAAATCAAATCATCTCACCAAGTACAGAAGAACAC
ATGCACTTGCTTACATGACTTGGCTTGTTCTC--------TGGATGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAA
AGTGCAGCGA----AAGAAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAGCAGCG---TCCAAGAAGCGTGTGAGGAT
CAGCTGTCCGAGATCAGCAGCCAGGCGGCGTCCAACAACAACGAGGC---------------G---------------TC
CAACACCTCCTCCCGTCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCGGCCGCCGCCGCGGCGGCCACCGCCA
CCGCCGAGTCGAGCACCACCGACAGCAAC---GGCGGCCCGCAGGCCGCGCGCGAGCCGACGCGGGTGTTCACCTGCAAC
TACTGCCAGAGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGGCCCGGCGCGCGGTGCACCGGCTGGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTC
TACGGCTCCCCCGGGCTGTACCCCATCGGCATCCAGGCGCACGCGTCGGCGCTCCCGGGCGCGGCGGCGGCGGCGCAGGC
GGAGCGGCAGCAGCACCAGCA------GCAGGACGCCGCCGTCCTCGCGGCCACGCCGGCGCGCGCGCGGG--CGCTGCT
GGGCCCGATGCCGTTCCTCGTGGGCGGCGACGAGGAGGTCAGCTTCGGGTGGCCCGGCAGCTTCAGGCCACCCCCACCGA
GCGCCGGCGTGCTCCCCCTCCTCCACTCAGGCCCCAACTTCGGCA----GCAGCAGCGGCAGCGGCAGCATCGTGGTGCA
AGCCGACGAGGAGCCCGACCTGACGCTCAGACTCTAGCCGCCATCCGTACGCACGCCGTCGATCGCTACGCTTATACGTA
CTGCTAGGTTGGTGCAACTCGTCAGGCTCCCGACGTCGATCAACGGATCATGATGGTAGACGACGACCCGTATTTGTTTC
ATGCGTG------------CGTACGTACGTACGTGGAAGTATTTCTGTACAGTTTTGGTGCTCTTCTGTGGTATTGGTAG
TAGCGTGTAG----CCTACAACTTCCCGCGGTATA---AAGATTCATGTGATCAATC--AATCATGTTGCTGTGCCCATG
AATTCTGAACTCCAGAATGTTTTC---CCCTTTTCCTTGCTAATAATGTTGTCGTGTGAGACTCCCCGTGCCGGCCAGTG
TGGCGTCGACACGCCTCCCCAGCCGTCGCTCTCGGCGGCGGAGCCGGAGTAGTACAACGGTGAGCGACGGGTCGAGGTCG
AGGCCGTCGCTGCTGCTGTCAGACCATGATGTCCTAACAGGAGTTGCAGCCTGTAGCTGTGAACAGGATCAGGGCG----
-AACAACCGAACAAGAAAATCCACGCGGGATCCCAACGCACACGCCAACAGTGTGGCCTGGCCTGGCCTGCGCCGGGAAA
AAACATCGAAAAGGAGAGGAGAAAATGACACGCTGGGAAGTTGAAATATTCTCATGACGACGATGACAACTATAGCAT--
-----------AGCATGGGGCTAAATGCACAGGTCATGACCCAACGACTGCACTCTGCACACCATCAGGCAATGAGCAAG
CAATGAACTGAAAATGCTGTCAGGTTATATCCGCCGGCGCAAGGTTAGGCCTCCTCCGCTTTATAATAACAACAGTTAAC
AACGGGTAGTAAAAAAGAACAAATTACAGATGGAACACAGCAACTTTGGTTTAGAAACCATTACACTCTAATGGACAACA
ACGGCG----ATCTGCAGGCATTCAGGAGCAGCAGGTGGTGGTTTTTTTTGTTTTTTTACCGGGATTCCTCTCTACACCC
ACATCTTCTTTGTGGCCTCCATCCGCTCGAGCAGGCCCTGGATCTCGGTCTGCATCC
>chr7B_795
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----------------------------------------TGGTGAGTCAGTCGATGAGTGCAGCTGAGACTAGAAACAA
GAGATCCTTTTCAA-TTCATGCGTCA--------------------------AATCATCTCACCAAGAAAATAAGAACAC
ATGCACTTGCTTACATGACTTGTCTTGTTCTC--------TGGATGCATGCAGGTGAGAGATAGATAAAGGAGCAAACAA
AGTGCAAAGAAAGAAGACAGAGAGACAGAGATTGTTTAGAGATGCCGAGCAACATCA---TCCAAGAAGTGTGTGAGGCT
CAGTTGTCCAGGATCATCAGCCAGGC------------------AGCATCCAACAATGAGGTG---------------TC
CAAAACCTCCTCCGGACCAAAGCTCGCCCTCGACCTATCGCTCACCGTCACCATTGCGT---CCACC---GCCACCACAA
CCTCCGAGTGGAGCACAACTGTCGATAACAGT---GGCGCGAAGGCCGCACGCGAGCCGACACGAGTGTTCATGTGCAAC
TACTTCCGCAGGAAGTTCTTCAGCTCGCAGGTGCTGGGCGGGCACCAGAAT--------GTGCACTGGCAGGAGCGCACG
CTGGCCCGACGTGCGGTGCACCAGCTCGAGGCAAACCCCTATGGCTAAGCCGACGTGTCCTCCCT--------TCCGCCC
TATGTCTCGCCCGA-CTGTACCCCATCGGCATCCAGGCGCACGC------------------------------------
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>chr5D_880
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------------------------------------------------------------------------AAGAACAC
ATGCACTTGCTTACATGACTTGGCTTGTTCTCTGGATGCATGCATGCATGCATGTGAGAGATAGATAAAAGAT----CAA
AGTGCAGCGA----AAGAAGACAGAGAGAGATTGTTCAGAGATGAAGAGCAACAGCG---TCCAACAAGCGTGTGAGGAT
CAGCTGTCCGACATCAGCAGCCAGGC------------------GGC---------------G---------------TC
CAACACCTCCTCCCGCCCCAAGCTCGCTCTCGACCAGTTGCTCACCATCACCGCCGCCGCCGCCGC------CACCACGA
CCGCCGAGTTGAGCACCACCAAAAGCAAC---GGCGACGCGCAGGCCGCGCGCGAGCCAACGCGGGTGTTCACGTGCAAC
TACTGCTAGACGAAGTTCTTCAGCTCGCAGGCGCTGGGTGGGCAGCAGAACACAGTAACGCACACCGG----------CG
GTGCCCCGGCGCGCCGTGCACCGGCTCGAGGCCTACCCCTACGGCTACGCCGACGTGGCCTCCCT--------CCCGCTC
TACGGCTCCCCCGAGCTGTACCCCATCGGTATCCAGGCGCACGCGTCGGTGCACCCAGGC------ACGGCGGCGCAGAC
GGAGCGGC------------------------------------------------------------------------
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>chr7B_972
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------------GAAGAGAGAGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGTGAGGAT
CAGCTGTCCGACATCAGCAGCCAGGC------------------GAC---------------GTCTAACAACGAGGCATC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCGCCGA------------CACCACGA
CCGCAAAGTCGAGCACCACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGGCCCTGCGTGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCACGGTCCCACCAGCTC
TATGGCTCACCCGTGCTATACCCCATCGGCATCAAAGCGCACGCGCCGGTGCACCC---C------GCGGCGGTGCAGGT
GGAGCGGCAGTAACA---------------GTAAGCCGCCTCCCTCGCTG---CGCCG--GCGCGCGCGCGGGCATAGCT
GGTCCCGATGTCGTTCCTCATGGGCGGCGACGAGGAG-TCAGCTTCCGGTGCCCCGACGGCTTCAGGCAACCACCGCCGG
GCGCCGGCGTGCTCCCTCTCCTCCACTCCGGCCACAAC------------------------------------------
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>chr2D_972
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------------GAAGAGAGAGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGCGAGGAT
CAGCTGTCCGACATTAGCAGCCAGGC------------------AGC---------------GTCTAACAACGAGGCATC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCGCCGA------------CACCACCA
CCGCAAAGTCGAGCACCACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCTGGAGCGCACG
CTGGCCCGGCGTGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTC
TATGGCTTGCCCGTGCTGTACCCCATCGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGC
GGAGCGGCAGCAACA---------------GGAAGCCGCCTCCCTCGCCG---CGCCG--GCGCGCGCGGGGGCTTTGCT
GGGCCCGATGCCGTTCCTCATGGGCGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCACCGCCGG
GCGCCAGTGTGCTCCCTCTCCTCCACTCCGGCCACAAC------------------------------------------
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>chr4B_978
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------------------AGAGAGAGAGAGATTGTTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGTGCGAGGAT
CAGCTGTCCGACATCAGCAGCCAGGC------------------GGC---------------GTCTAACAACGAGGCATC
CAACACCTTCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACTGCCACCGA------------CACCACGA
CCGCAAAGTCGAGCACCACTAACAGGACC---GGCG-------------------------GCGGGTGTTCACGAGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACTAGAAC--------GCGCACCGGCGAGAGCGCACG
CTGGCCCGGCGTGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTC
TATGGCTCACCCGTGTTGTACCCCATTGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGC
AGAGCGGCAGCAACA---------------GGAAGCCGCCTCCCTCGCTG---TGCTGGCGCGCGCGCGGG--CGTTGCT
AGGCCCGATGCTGTTCCTCATGGGCGGGGACGAGGAGGTCAGCTTCGGGTGCCTCGACAGCTTCAGGGCACCACCGCCGG
GCGCCGGCGTGCTCCCTCTCCTCCACTCCGGCCACAAC------------------------------------------
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>chr3A_978
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------------------AGAGAGAGAGAGATTGTTCAGAGACGAAGAACAGTAGCG---T--AAGAGGTGTGAGAGGAT
CAGCTGTCCGACATCAGCAGCCAGGC------------------GGC---------------GTCTAACAACGAGGCATC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACTTGTCGCTCACCGTCACCGCTGCCGA------------CACCACGA
CCGCGAAGTCGAGCACCACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCACGCGCTGGGCGGGCACCAGAAC--------GCGCACCAGCGGGAGCGCATG
CTGGCCCGGCATGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTC
TATGGCTCGCCCGTGCTGTACCCCATCGGCATCAAGGTGCACGCACCGGTGCACCC---C------GCGGCGGCGCAGGC
GGAGCGTCAGCAACA---------------GGAAGCCGCCTCCCTCGCTG---CGCCG--GCGCGCGCGGG--CGTTGCT
GGGCCCGATGCCGTTCGTCATGGGCGACGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCACCGCCGG
GCGCCGGCGTGCTCCCTCTCCTCCACTCCGGCCACAAC------------------------------------------
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>chr4D_994
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----------------------------------TTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGCGTGAGGAT
CAACTGTCCGACATCAGCAGCCAGGC------------------GGC---------------GTCTAACAACGAGGCATC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCGCCGA------------CACCACAA
CCGCAAAATCGAGCACCACCGATAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCAGGCGCCGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGG-CCGGCGTGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGCCCTCCCT--------CCAGCTC
TATGGCTCGCTCGTGCTGTACCCCATCGGCATCAAGGCGCACGCGCCGGTGCACCC---C------GCGGCGGCGCAGGC
GGAGCGGCAGCAA-----------------GGAAGCCGCCTCCCTTGCTG---CGCC------------GG--CGTTGCT
GGCCCCGATGCCGTTCCTCATGGGTGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTCAGGCCACCA-------
---CCGGCGTGCTCCCTCTCCTCCACTCCGGCCACAACCTGGGGCTTGGGCAGCAGCGGCA-------------------
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>chr1D_994
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----------------------------------TTCAGAGACGAAGAGCAGCAGCG---TCCAAGAGGTGCGTGAGGAT
CAACTGTCCGACATCAGCGGCCAGGC------------------GGC---------------GTCTAACAACGAGGCATC
CAACACCTCCTCCCGCCCCAAGCTCGCCCTCGACCTGTCGCTCACCGTCACCGCCGCCGA------------CACCACAA
CCGCAAAATCGAGCACCACCGACAGGACC---GGCG-------------------------GCGGGTGTTCACGTGCAAC
TACTGCCAGGGGAAGTTCTTCAGCTCGCAGGCGCTGGGCGGGCACCAGAAC--------GCGCACCGGCGGGAGCGCACG
CTGG-CCGGCGTGCGGTGCACCAGCTCGAGGCCTACCCCTACGGCTACGCCGATGTGGCCTCCCT--------CCAGCTC
TATGGCTCGCTCGTGCTGTATCCCATCGGCATCAAGGCGCACGCGCTGGTGCACCC---T------GCGGCGGCGCAGGC
GGAGCGGCAGCAA-----------------GGAAGCCGCCTCCCTTGCTG---CGC---------CGCGGG--CGTTGCT
GGGCCCGATGCCGTTCCTCATGGGTGGCGACGAGGAGGTCAGCTTCGGGTGCCCCGACAGCTTTAGGCCACCA-------
---CCGGCGTGCTCCCTCTCCTCCACTCCGGCCACAAC------------------------------------------
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>SNPs
----------------------------------------------------S---------------------------
---------------------------------------------------------S----------------------
-------------------------------------------S------------------------------------
-------------------------------------------S------------------------------------
---------------------------------S---------------------------------------S------
---------------------------------------------S----------------------------------
-------------S--------------------------------S------------------------------S--
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------S---S-S-----------------S--------------S--------S-------------------------
--------------------------------------------------------------------------------
-S---------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
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------------------------------SS-------S----------------------------------------
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---------------------------------------S-----S--S-------------------------------
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------------------------------------------------------------S------S---------SSS
S-S--------------------------------S--------S------------S-SS-------------------
-----------SSSS-----------------------------------------------------------------
-----------------------------------SSS------------------------------------------
---------------------------------------------------------------S----------------
-------------------S------------------------------------------------------S-----
--------------------------------S----------------------------S------------------
--------------------------------------------------------------------------------
------------------------------S--------------------S----------------------------
-------S--SS---------S----------------------------------------------------------
---S---------------------------------------------------------------------S------
------------------S--------------------S----------------------------------------
------------------------------------S---------------------------S---------------
---------------------------------------------------------
>forward_284
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------------------------CTCCAGAAACACCACAGGGA------------------------------------
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>reverse_2353
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--------------------------------GCTAACAGGAGTTGCAGCCT----------------------------
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