>input_sequence_70606
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-----------------------------------------------------------------------------ATG
GAAGTTGCTGCGCCCAAGCAACTCCTCCCCATGGCGCCGCGGGACCCCAACTCCCCGTCCTCCTCCACCTCCTCCTCCTC
GCCGTCCTCCGCCGCGTCGCCCT----------------CCAGCCACCGCCCCAGCCCG--CTGCCGCCGTCCCCGCGGC
CCGTGCCGCGCACCATCGACACCACCCCCTTCCCCACCACCTTCGTCCAGGCCGACACCGCCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCGCCGACATGCCGCCGCCGGCACCGTCCTCGCAGCCGCAGGCCCAGAGCCAGAGGCCCCCCGCGGC
CGCCAA---------CAACAAGGCCG------------------------GCGCCCCGTGCCGGCCCAAGAAGCCGGCTT
TCAAGCTCTACGAGCGCCGGAGCAGCATGAAGAACCTCAAGATGATCGCGCCGCTCGCCATGGCGGCCGCCGCGGGGGCG
TCGCCGAGGAAGGCGCT------GCCGGAGCTGCTGTCGCCCAGCGTGCTCGACTTCCCGTCGCTGGCGCT---CAGCCC
CGTCACGCCGCTGGTGTCCGACCCCTTCAACCGGTCCGCGTCGGCGTCCCCGGCGGAGCAGGAGGCGGCCGCGGAGCGCG
CGGCCATCGCGCGCAAGGGCTTCTTCCTCCACCCGTCCCCTCGTGGCGGCGCCGGCGAGCCCCCGCCGCGCCTGCTGCCG
CTGTTCCCCGTCACCTCCCCCCGGATGGCCTCCGCCTCCGCCGCG------CCGTCGTCGGAGTGA--------------
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---------------------------------
>chr1A_1_TraesCS1A01G338700
GTTTCCCCTTTTTTTTGGCCGATCTGACAACTTGATCATAACTGCAGTCTACCCCGACCCTTGGCCTT------------
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----------------------CTCCTTCACCGCACATCTAGTGTTTCCCCCTTTTTGGTCCAATGTCCATCTGATTAAC
TTCACCATGATTGCAATCTACCCTACCCCTCCGCCTTCTCCTTCACCGCGCCTTTGACGTTTCCCATTTTTTCGACTGAT
CTGATAAATTGATCATAACTGCAACCTACCATG-CCCCTCGACCTCCGCCTTCAACACACCCATGATGTTTCTGTTTTTT
GTTGATCCGATAACTTGACTATAAATGTAATGTAGCCCGCCCCTCCGCCATATCCTTCACGATACCTCGCACGTTTTCCC
TGATCCAGCCAATATGATAACTTGACCATATCTNNNNNNNNNNGGCCACACGTT--------------------------
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--------------------------------------------TCCCAAAAAACATGTTTACAATTCACAGAGGCCAGA
TATAATTTTGCAGGTTCACATTGATTTGAAAAGTTGAGATCGAAGTGCAGTCCTATCCTTTTACACCTCCACCCCTTTTT
TTTCTTTACATCTCTCACAACTCCATCTTATGGTACCAGAGTACTCTAAAAAACCGAGATTCAAATGTCGAGCGTAGCGT
CAATCGTACTCTCACAATTTCACCTCTTATGGTAGGTATATTTCCAAAAACT-AAATAGTTTTCCATGCCACAAGCACAA
CAATACCATGACAAAGGG----AAAAAAGGCCTCCCAAGAAAATGAAAAGACTTTTTTTAGGAAAAAGAGAATTGGTGAA
CTGAAAACCGGCAAGAAAACACGGGAGCGCGGAACGGACATGTCAAGCCCCACACACCAACTATGTGCATCACCTCACGG
TCAAAGGAAGAA--AAATAAATAAATAACACTACATGCATCACAACTCCCTCGCTCCCTCCCCTTCTTATTCCCACTCCC
TCCGCCGTCCCTGAACCCAG--CCCTCCCCCCCTCCCTTCTTCTCCATCCATCCCCGAG---ACCAACCAACCAACAATG
GAAGTTGCTGCGCCCAAGCAACTCCTCCCCATGGCGCCGCGGGACCCCAACTCCCCGTCCTCCTCCACCTCCTCCTCCTC
GCCGTCCTCCGCCGCGTCGCCCT----------------CCAGCCACCGCCCCAGCCCG--CTGCCGCCGTCCCCGCGGC
CCGTGCCGCGCACCATCGACACCACCCCCTTCCCCACCACCTTCGTCCAGGCCGACACCGCCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCGCCGACATGCCGCCGCCGGCACCGTCCTCGCAGCCGCAGGCCCAGAGCCAGAGGCCCCCCGCGGC
CGCCAA---------CAACAAGGCCG------------------------GCGCCCCGTGCCGGCCCAAGAAGCCGGCTT
TCAAGCTCTACGAGCGCCGGAGCAGCATGAAGAACCTCAAGATGATCGCGCCGCTCGCCATGGCGGCCGCCGCGGGGGCG
TCGCCGAGGAAGGCGCT------GCCGGAGCTGCTGTCGCCCAGCGTGCTCGACTTCCCGTCGCTGGCGCT---CAGCCC
CGTCACGCCGCTGGTGTCCGACCCCTTCAACCGGTCCGCGTCGGCGTCCCCGGCGGAGCAGGAGGCGGCCGCGGAGCGCG
CGGCCATCGCGCGCAAGGGCTTCTTCCTCCACCCGTCCCCTCGTGGCGGCGCCGGCGAGCCCCCGCCGCGCCTGCTGCCG
CTGTTCCCCGTCACCTCCCCCCGGATGGCCTCCGCCTCCGCCGCG------CCGTCGTCGGAGTGAGCGAG----CCGAC
TCTCTCCGCCGCGTAGAGCGTACGACGTACGGCGGCGTACTATTACTGAATTGTCCGGAGTAGCTCGTCCTCGGTGCTGG
TAGTATGTTGTAATTTTTGCTCGCGTTGTTGAGCGACGGCTCGCGAAGGAACGGAA----AAGGATCACACTCTTTGAGC
TCCTCCCCTGCCCTCC-----TCTGTTCTTGGTGGATCGGATCGGTGCTAATTGTGCCTAATTTACTCTCACAATTAACT
GTCTCCGTTTCATCATGCAGTTAATTTCCGGAAAATATTTCCCATCCCTTTCTTTCCTCTCATTCATGGAAACGGCATGC
ACATC--------------TCTCGTCTTTTAAGTTGCGCTACCAAAGCTTAATTTCCGCCAAGATACGAACCATCCACTG
TACCAATAACGGTTGCAGCATTCAGAATTCTTCCCAAATCTATGCAAGCATCCAGCCTGACACAAGATGGAAC-AAGGAA
TTCTGCCAGAATTCTCCTCAGTGTCCCTAATTAAATTCCCCGACAAGGCCGCAAGAGTCAGAGCATCTTCTTCAATGGCG
TAGAATCAGAGGGGGGGGCAGTGCCCCTCCCCTGTACTTGTTCCTGTAGATTCAGAGAGATT------------------
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--------------------------GCAGTGTCGAAGGAAC-AACAGACGAACAAGCCGTCATGTCACATCGAGCCGTG
ACTTTTAGACGTAGAATTATTGCAACTTTGAATTTCTCTTTTACTACATTTATGTGCCTTGAAGAGTTCTGTGCTAGTGC
TAGTGATCTGGCTGGCATCGGGTTCGGGTCAAAGGAGGCGTCGTTGTCAAGCATCCAGCCGAGAAGCGGCACAAGGAAGG
AGGAG-------TTGGACTGTCCAGTTGACCGCCCGGGACAGCGGGT--GGTGGTGCGCCGGCGGCGGATGGCCGGCCGG
CCGGCAGTGCAAC----CCATCATCGGTGCACCTTTGCTTTTCCCCAAAGCGGCTCC-GCCCTTGGCCTTGGTGGTGCGT
GCATCACAGGTCAGTACGTATGGGCACATGCCT
>chr1D_1
TTTTTTGGCTAATCTAG----------TAACTTGATCATAACTGCAGTCTACCCCGCCCCTCGGCCTTCTCCTTCACTAC
ACGTCTGGTGTTTCCACTTTTTTGGTCATCCGTTAAATTCACCATGATTGCAATCTACCTCGTCGTTCCGCTTTCTCCTT
CATCACACCTCCGACGTCTCCCCTTTTTTGCCTGATCTATAACTTGATCATAACTACAATCTACCCAACCTCTCAGCCTT
CTCCTTCGCCACACGTTTGGTGTTTCCCCTTTTTGGCTCATCTAATAACTTCACCATGATCGCCATCTACCCTGCCCCTC
CGCTTTCTCCTTCATCACGCCTCGTATGTTTCCCCCTTTTTTGGTTGATCTGATAACTTGATCATAACTGCACTCTAACC
CGCCCCTCGACCTTCTCCTCCACCACACATCTGGTGTCCCCCTTTTTTGGTCCATCTGATAACTTCACATGATCGCAATC
TACCATGCCCCTCCGCTTTCTCCTTCGTCACACCTGGGATGTTTCCCCCTTTTTTGGTTGATCTGATAACTTGATCATAA
CTGCAGTCCGCCCCTCGGCCTTCTCCTTCACCACACATCTGGTGTTTCCCCTTTTTTGGTCCATCTGA--------TAAC
TTCACCATGATTGCAATCTACCCTACCCCTCTGCATTCTCTTTCAACACGCCTCTGATGTTTCCCCTTTTT-CGACTGAT
TTGATAAATTGATCATAACTGCAACCTACCATGCCCCCTCGACCTCCGCCTTCACCACACCCGTGATGTTT-----TTTT
GTCGATCCGATAACTTGACTATAAATGTAATGTAGCCCGGACCTCCGCCTTCTCCTTCGCGATACCTCTCACGTTTCCCC
TGGTTTAGCCAATATGATAACTTGACCATAACTGCAATTTACCCCGCCCCCTCCTTCTCATCCACCATGCCCCGACGTTT
CCCATTTTTCCGTTGATCCGGTAACTTGACAATAGCTGCAATCTACCCCCCCCTCCCTCCGCCTTCGCCTGACCATG---
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--------------------------CGTTCGAACTTGAGTACATCCCAAAAAACATGTTTACAATTGATGGAAGCCAGA
TACAATTTTGGAGGTTCACACTGATTTG--AAGTCGAGATCAAAGTGCAGTCCTATCCTT--ACAACACCACCTCTCTTT
TTTCC--ACATCTCTCACAATTCCACCTTATGGTACTAGAGTGCTCTAAAAAACCGGGATTCAAATGTTGAGCGTAGCGT
CAATGGTACCCTCACAATTTCACCTCTTATGGTAGGTATATTTTCGAAAACTAAAATAGTTTTCCATGGCACAAGCACAA
CAATACCATGACAAAGTAGAAAGAAAAAGGCTACCCAAGAAAATGAAAAGACTTTTTAGG---AAAAGAGAATTGGTGAA
CTGAAAACCGGCAAGAAAATATGGGAGCGCGGAACGGACATGTCAAGCCCCACACACCAACTATGTGCATCACCTCACGG
TCAAAGGGAGAA--TAA---ATAAATAACACTATATGCATCACAACTCCCTCGCTCCCTCCCCTTCTTATTCCCACTCCC
TCTGCCGTCCCTGAACCCAGCCCCTTCCCCCCTTCCTCCCTCCTTCATCCATCCCCGACGAAACCAACCAACCAACAATG
GAAGTTGCCGCGCCCAAGCAACTCCTCCCCATGGCGCCGCGGGACCCCAACTCCCCGTCCTCCTCCACCTCCTCCTCCTC
GCCGTCCTCCGCCGCGTCGCCCT----------------CCCACCACCGCCCCAGCCCG--CTGCCGCCGTCCCCGAGGC
CCGTGCCGCGCACCATCGACACCACCCCCTTCCCCACCACCTTCGTCCAGGCCGACACCGCCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCGCCGACATGCCGCCGCCGGCGCCGTCCTTGCAGCCGCAGGCCCAGGCCCAGAGGCCCCCCGCGGC
CGCCAA---------CAGCAAGGCCG------------------------GCGCCCCGTGCCGGCCCAAGAAGCCGGCTT
TCAAGCTCTACGAGCGCCGGAGCAGCATGAAGAACCTCAAGATGATCGCGCCGCTCGCCATGGCGGCCGCCGCGGGGGCG
TCGCCGAGGAAGGCGCT------GCCGGAGCTGCTGTCGCCCAGCGTGCTCGACTTCCCGTCGCTGGCGCT---CAGCCC
CGTCACGCCGCTGGTGTCCGACCCCTTCAACCGGTCCGCGTCGGCGTCCCCGGCGGAGCAGGAGGCGGCCGCGGAGCGCG
CGGCCATCGCGCGGAAGGGCTTCTTCCTGCACCCGTCGCCCCGGGGCGGCGCCGGCGAGCCCCCGCCGCGCCTGCTGCCG
CTGTTCCCCGTCACCTCGCCCCGGATGGCCTCCGCCTCGGCCGCCGCAGCACCGTCGTCGGAGTGAGCGAGTGAGCCGAT
CCGCTCCGCCGCGTAGAGCATGCGACG----GCGGCGTACTATTAATCAATTGTCCGGAGTAGCTCGTCCTCGGTGCT--
-AGTATGTTGTAATTTTTGCTCGCTTGGTTGAGCGACGGCTCGCGAAGGAACGGAACGGAAAGGATCACACTCTTTGAGC
TCCTCCCCTGCCCTCTTCTGTTCTGTTCTTGGTGGAT-----CGGTGCTAATTGTGCCTAATTTACTCTCAGAATTAACT
CTGTCCGTTTCATCATGCAGTTAATTTCCGGAAAATATTTCCCATTCCTTTCTTTCTTCCCATTCATGGAAACGGCATGC
ACATCACTGGCCCGGGATCTCTCGTCTTTTAAGTTGCGCTACCAAAGCTTAATTTCCGCTAAGATACGAACCATCTACAG
TCCTAATAATGGTTGCAGCATTCAGAATTCTTCCCAAATCTATCTAAGCATCCATCCTGACACAAGATGGAACAAAGGAA
TTCTTCCAGAATTCTCCTCAGTGTCTGTGATTAAATTCCCTGACAAGGCCGAAAGAGTCAGAGTATCTTCTTCAATGGCG
TAGAATCAGAGGGGGGGCAGTGCCC---CCCCTGTACTTGTTCCTGTAGATTCAGAGAGATT------------------
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--------------------------GCAGTGTCGATCGAAGGAACACAGGAACAAGCCGTCATGTCACATCGAGCCGTG
ACTTCTAGTCGTAGAATTATTGCAACTTTGAATTCTTCTTTTAC---ATTTATGTGCCTTGAAGCGTTCCCTGCTGCTGC
TAGTGAT----CTGGCATCTGGTTCGGGTCAAAGGAGACGTCGTTGTCATGCATCCAGCC----AGCAGCACAAGGAAGG
ATGGTTCGAGTC--AGACTGTCCAGTTGACCGTTCGGGACAGCGGGT--GGTGGTGCGCCGGCGGCGGATGGCCGGCCGG
CCGGCAGTCCAACCCATCCATCATCGGTGCACCTTTGCTTTTCCCCAAAGCAGCTCC-GCTCTTGGCCTCGGTGGTGCGT
GCACAACAGGTCAGTACGTATGGGCACATGCC-
>chr1B_1
GTTTCCCCCCTTTTTTGGCCGGTCTGATAACTTGATCATAACTGCAGTCTACCCCGCCCCTCGGCCTT------------
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----------------------CTGCTTCTCCATGCATCTGGTGTTTCCCCTTTTTTGGTCCATCTGA--------TAAC
TTCACCATGGTTGCAATCTACCCTACCCCTCCGCCTTCTCCTTCACCACGCCTCTGACTTTTCCACTTTTT-CAATTGAT
TTGATAAATTGATCATAACTGCAACCTACCATGCCC-CTCGACCTCCGCCTTCACCACACCCGTGATGTTTCTGTTTTTT
GTCGATCCGATAACTTGACTATAAATGTAATGTAGCCCGCCCCTCCGCCTTCTCCTTCACGATACCTCTCATGTTTCCCC
TGATTCAGCCAAAATGATAACTTGACCATAACTGAAATTTACCCCG-CCCCGCCTTCTCGTCCACCATGCCCCAATGTTT
CCCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGACCACACGTTCGAACTTGAGTGCATCGCAAAAAACATGTTTACAGTTGATGGAGGCCAGA
TATAATTTTGCAGGTTCACACTGATTTGAAAAGTCGAGATCAAAGTGCAGTCCTATCCTT--ACAACTCCACCCCTTTTT
CCA--TTACAACTCTCACAATTCCACCTTATGGTACTAGAGTACACTAAAAAACCGGGATTCAAACATTGAGCGTAGCGT
CAATGGTACCCTCACAATTTCACCTCTTATGGTATGTATATTTTCGAAAACTCAAATAGTTTTCCATGGCACAAGCACAA
CAATACCATGACAAAGTA-AAAAAAATAGGCTTCCCAAGAAAATGAAAAGACCTTTTAGG---AAAAGAGAATTGGTGAA
CTGAAAACCGGCAAGAAAACATGGGAGCGCGGAACGGACATGTCAAGCCCCACACACCAACTATGTGCATCACCTCACGG
TCAAAGGAAGAAAATAA---ATAAATAACACTATATGCATCACAACTCCCTCGCTCCCTCCCCTTCTTATTCCCACTCCC
TCTGCCGTCCCTGAACCCATCCCCTTCCCCCCCTCTCTTCTTCTCCATCAATCCCCGACGAAACCAACCAACCAACAATG
GAAGTTGCTGCGCCCAAGCAACTCCTCCCCATGGCGCCGCGGGACCCCAACTCCCCGTCCTCCTCCACCTCCTCCTCCTC
GCCGTCTTCCGCCGCGTCGCCCT----------------CCAGCCACCGGCCCAGCCCG--CTGCCGCCGTCCCCGAGGC
CCGTGCCCCGCACCATCGACACCACCCCCTTCCCCACCACCTTCGTCCAGGCCGACACCGCCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCGCCGACATGCCTCCGCCG------TCCTCGCAGCCGCAGGCCCAGAGCCAGAGGCCCCCCGCGGC
CGCCAA---------CAGCAAGGCCG------------------------GCGCGCCGTGCCGGCCCAAGAAGCCGGCGT
TCAAGCTCTACGAGCGCCGGAGCAGCATGAAGAACCTCAAGATGATCGCGCCGCTCGCCATGGCGGCCGCCGCGGGGGCG
TCGCCGAGGAAGGCGCT------GCCGGAGCTGCTGTCGCCCAGCGTGCTCGACTTCCCGTCGCTGGCGCT---CAGCCC
CGTCACGCCGCTGGTGTCCGACCCCTTCAACCGGTCCGCGTCCGCGTCCCCGGCGGAGCAGGAGGCGGCCGCGGAGCGCG
CGGCCATCGCGCGCAAGGGCTTCTTCCTGCACCCGTCGCCGCGGGGCGGCGCCGGCGAGCCCCCGCCGCGCCTGCTGCCG
CTGTTCCCCGTCACCTCCCCCCGGATGGCCTCCGCCACCGCGCCG------TCGTCG-----------GAGTGAAGCGAT
CCAGCCCGCGCGTGGAGCGCGCATGGCA------------TATTACTGAATTGTCCGGAGTAGCTCGTCCTCGGTGCT--
-AGTATGTTGTAATTTTTGCTCGCTTGCTTGAGCGACGGCTCGCGAAGGAACGGA----AAAGGATCACACTCTTTGAGC
TCCTCCCCTCCCCTGT-----CCTGTTCTTGGTGGAT-----CGGTGCTAATTGTGCCTAATTTACTCTCAGAATTAACT
GTGTCCGTTTCAT---GCAGTTAATTTGCGGAAAATCTTTCTCATTCCTTTCTTTCCTCTCATTCATGGAAACGGCATGC
CCATCACTGGCCCGGGATCTCTC-TCTTTTAAGTTGCACTA---AAGCTTAATTTCCGCTAAGGTACGAACCATCTACTG
TACTAATAGTGGTTGCACCATTCAGAATTCTTGCCAAATCTATGTAAGCATCCAGCCTGACACAGGATGGAAC-AAGGAA
TTCTGCCAGAATTCTCCTCAGTGTCTGTGATTAAATTCCCTGACAAGGCCGCAAGAGTCAGAGTATCTTCTTCAATGTCG
TAGAATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTGTCGA-----GGAACACAAGAACAAGCCGTCATGTCACATCGAGCTGTG
ACTTGTAGTCGTAGAATTATTGCAACTTTGAATTTTTCTTTTAC---ATTTATGTGCCTTGAAGCGTTCCCTGCCGCTAC
TAGTGAT----CTGGCATCTGGTTCGGGTCAAAGGAGACGTCGTTGTCATGCGT----CC----AGCAGCACAAGGAAGG
AGCCACCAGCGATTAGACTGTCCAGTTGACCATTCCGTTCCGGAACCGGGGTGGTGCGCCGGCGGCGGATGGCCGGCCGG
C----AGTCCAACCCACCGGCGCACCT----CCTTTGCTTTTCCCCAAAGCAGCTCCCGCTCCTGGCCTCGGTGGTGCGT
GCATAACAGGTCAGGACGTATGGGCACATGCC-
>chr3D_1017
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-------------CCAAGCAGTTCCTCCCCATGCCTCCGCAGGACCCCAACTCCCCGTCGTCGTCCACCTCCTCTTCCTC
CTCCTCCTCCACCTCGCCGTCTCACCCCTACCACCGCGCCCAGCCGCCGCACCCGCACAACCTTCCGCCCTCCCCCAGGC
CCGTTCCCCGCACCATCGAGACCACCCCTTTCCCCACCACCTTCGTCCAGGCCGACACCACCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCTCCGAGCAGTCCT---------------------------------CCAAGAGCGCCGCCGCGGC
GACGAC---------CAACGGCAGCGCCGGGAACCAGGCGGCGAGCGGGAGCGGCCCGTGCCGCCCGAAGAAGCCGTCCT
TCAAGCTGTACGAGCGGCGGAGCAGCCTCAAGAACCTCAAGATGATCGCGCCGCTGGCCATGGGGGCGCC------GCCG
TCGACGAGGAACGCCTCCGCCGCGCCGGAGATCCTGTCTCCGAGCGTCCTGGACTTCCCGTCCCTGAAGCTCAGCAGCCC
GGTGACGCCGCTCACCGGCGACCCCTTCTTCCCCTCGCCGGCGTCGTCCTCGGGGGAC---------GCCGCCGAGCGCG
CGGCCATCGCCGACAAGGGCTTCTTCTTCCACCCTTCGCCGCGGGGCGCCGAG---------CCGCCGCGGCTCCTCCCG
CTGTTCCCCGTCAGCTCGCCCAGGATGGCCGCCGCGTCCGCGACG------GCGGCGCCGGCC-GAGTGAGTGACCCAAA
GCCTCCGCC-----------------------------------------------------------------------
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>chr3A_1017
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-------------CCAAGCAGTTCCTCCCCATGCCTCCGCAGGACCCCAACTCCCCGTCGTCCTCCACCTCCTCTTCCTC
CTCCTCCTCCACCTCGCCGTCCCACCCCTACCACCGCGCGCAGCCGCCGCACCCACACAACCTCCCGCCCTCGCCCAGGC
CCATCCCCCGCACCATCGAGACCACCCCGTTCCCCACCACCTTCGTCCAGGCCGACACCACCTCCTTCAAGCAGATCGTC
CAGATGCTCACCGGCTCCGAGCAGTCCT---------------------------------CCAAGAGCGCCGCCGCGGC
GACGAC---------CAACGGCAGCGCCGGGAACCAGGCGGCGAGCGGGAGCGGGCCGTGCCGCCCGAAGAAGCCGTCCT
TCAAGCTGTACGAGCGGCGGAGCAGCCTCAAGAACCTCAAGATGATCGCGCCGCTGGCCATGGGCGCGCC------GCCG
TCGCCGAGGAACGCCTCCGCCGCGCCGGAGATCCTGTCGCCGAGCGTCCTGGACTTCCCGTCCCTGAAGCTCAGCAGCCC
GGTGACGCCGCTCACCGGCGACCCCTTCTTCCCCTCGCCGGCGTCGTCCTCGGGGGAC---------GCCGCGGAGCGCG
CGGCCATCGCCGACAAGGGCTTCTTCTTCCACCCTTCGCCGCGGGGCGCCGAG---------CCGCCGCGGCTCCTCCCG
CTGTTCCCCGTCAGCTCGCCCAGGATGGCCGCCGCGTCCGCGACG------GCGGCGCCGGCC-GAGTGAG---------
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>chr3B_1017
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-------------CCAAGCAGTTCCTCCCCATGCCTCCTCAGGACCCCAACTCCCCGTCGTCGTCCACCTCCTCTTCCTC
CTCCTCCTCCACCTCGCCGTCTCACCCCTACCACCGCGCCCAGCCGCCACACCCACACAACCTTCCGCCCTCACCCAGGC
CCGTCCCCCGCACCATCGAGACCACCCCGTTCCCCACCACCTTCGTCCAGGCGGACACCACCTCCTTCAAGCAGGTCGTC
CAGATGCTCACCGGCTCCGAGCAGTCCT---------------------------------CCAAGAACGCCGCCGCGGC
GACGACCGCCGCAGGCAACGGCAGCGCCGGGAACCAGGCGGCGAGCGGGAGCGGCCCGTGCCGCCCGAAGAAGCCGTCCT
TCAAGCTGTACGAGCGGCGGAGCAGCCTCAAGAACCTCAAGATGATCGCGCCGCTGGCCATGGGGGCGCC------GCCG
TCGCCGAGGAACGCCTCCGCCGCGCCGGAGATCCTGTCCCCGAGCGTCCTGGACTTCCCGTCCCTCAAGCTCAGCAGCCC
GGTGACGCCGCTCACCGGCGACCCCTTCTTCCCCTCGCCGGCGTCGTCCTCGGGGGAT---------GCCGCCGAGCGCG
CGGCCATCGCCGACAAGGGCTTCTTCTTCCACCCTTCGCCGCGGGGCGCCGAG---------CCGCCGCGGCTCCTCCCG
CTCTTCCCCGTGAGCTCGCCCAGGATGGCCGCCGCGTCCGCGACG------GCGGCGCCGGCC-GAGTGAGTGACCCAAA
GCCTCCGCC-----------------------------------------------------------------------
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---------------------------------
>SNPs
--------S------------S-----S----------------------------S----S------------------
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--------------------------------S-------S----------S-----------SSSSSSSSSSSSS----
-----------------------------------------------S-----S-----------S-----S--------
S-----------------------------------------------------S-------S-----------------
--S----------------------------------------------S-S----------------S-------S---
----S-------------------------S--SSSSSSSSSSSSS-S-S--SS--------------------------
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-------------------------------------------------------------------S-SS---------
--------------------S-------------S------S------------------SS---S--------------
----S---------------S----S----------S-------------------S-----------S-----------
----S----S---------------------------------S-S----------------------S-----------
----------------SS-------------S-------------------------SSSSSS-----------------
---------------------S----------------------------------------------------------
--------------S--SSS-------------S----------------------------------------------
--S---------------------S---------------------------------S---------------------
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----------------------------------------------------------------------------S---
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-----------------------------------S--------------------------------------------
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-------------------------------------S--S--S------------------------------------
-------------------------------------------------------------------------------S
S-S----------------S-S-----SSSS-----------------------------------------------SS
S-----------------------S-S-----------------------------------------------------
---------------S---------------------SSSSS-----------------------------S--------
--S------------------------------------------S----------------------------------
-----------------------------------------------------------S---------------S----
---S-----S----------------------------------S-----------------------------------
-------------------------SS-S-----------S----------------------S----------------
-----------------SSSSSS--SSS----------------------------------------------------
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------------------------------------SS---S-----S-S------------------------------
----S---S--------------------------S--------SSS-----------------S----SS----SS---
-------SSSS--------S-----------------S-----------S----------SSSS---S------------
---SS---------S-----------------SS----------------------------------------------
--------S------------------------------------------S--------S--------S----------
----S---------------------------S
>forward_593
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-------------CTTGGCCTTCTCCTTCACCG-----------------------------------------------
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>reverse_2918
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-------------------------------------CGGATCGGTGCTAATTGTGC-----------------------
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