>input_sequence_70598
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--------------------------------------------------ATGTTGTGCTGTCACTCTATCAAGGTTAGT
GTCCTTGGTATTTTT-TTCTTCCTATGCAGGTTTCTATCAGC-TTGTTGCTGATCAATGTTCTTTTTCCTGATTGATCAA
GCAGGTTCTGATACGAAACGACATACTCAAAATCCCGAGTAAGAACATCGTGAAGAGGTGGACCAAAATGGCAAAGGAAG
TGCAGCCTTCAAACCTTGCTCTGCCTCATGCATCGATTCAGCCAGACGATGCTTCATACCGGCAAAATATCCTGTACATT
GCCGCTCTAGAAACGGTGAAGGAGACCTCCCTTTGCAAGGGCATGCTTGACAAGACACTAAAAGTTTTTCAGGAACTGAG
GACCGAAGCTAGACATATGCGATTGCTGGAGGAGGAAAGCCATAATGAGCCGGGTGAAGGACGGTGTGATGCAGATAATT
TCATTGCCATCACGTCATGTGAGCAGTTGCATCCGCCAAAGCGAGTGAAATCCAAAGGTAGGACAGCAACTGTAAGGATG
AAATCAAGGATGGATTATGTATCACTCTTCCAGCAAAAGAGCAAGAAGGTTGATAGTGTTTACAATCAACCAAACTTTCT
GTCAGAAATCGGAAGAGACAACACCTCTAGCGACCATCATAATGATTTGATATCCCAATACAAGAGGGTTATCAAATGTA
GCAGATGTAAGGGAGAAGGTCATAATAGGTCATCGTGCAAGAAACGCGGGTTCTGA------------------------
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>chr5D_1_TraesCS5D01G363600
CATCTTTTCCATGTTAACATGAAAATCATTATGTGCAGATCAGTGCAAGGTGATGGAAGGAGCAATAGAAAACATATTGC
CAAATACGAAGCATAGGTGGTGTAAGTGGCATGTATTGAGGTGCGCAAAGGAGAAGCTTGGCCCTGTATACAGCAAGAAG
AGTGGATTCAAACATGAGTTCCACAAAATTATAAATGATATTATTTATGTCACAGAATTTGAGGGAAAGTGGGCTGAACT
TATAGATAAGTACAATCTGAAGGATAATCCTTATCTTGAGAATCTATATAGCAAGCGGACCATGTGGGCTAAACCATACT
TCTCCAGTGTGTTCTGTGCTGGGATGACAAGTACTCAACGCAGCGAGAGCGCAAACCACCTGCTGAAACAGTACATACCT
CGTTCATCACCTATGCACCTATTTGTCAAGCAGTACAACAAGCTACTCCAATCACGCACATCGGATGAGGGCAGGCAGCA
ACACATGACAAAGATGGTGAGAAGCCCAAATATGC-ATATTTTGATGTGTCTATTTAGT-------TGATATATATACCG
CTAGATCAATATTCATAAGATATACAAACCCGAAATGCATCAAACCTGTAGCTTAGATTGTTCAATCCACACACAAAAAG
TGTAATGCCTCACAAGCTTTTGCACCATTTGCTTAGCATAAAATTTGTTGCAAGATTGAACTTAGTATAATCAAGCTGCT
TTCTGTGTGTGTATGTTTGTTTGCAGAAACGTCGAAGACTCAACGGAGGGTTCCCCTTGGAAGCTGATGCAGCCAAGATA
TATACTAAGGGTGTGTTCATTAAATTTGAAGAGGAGCTTTATCAAGCTGCATCGTTTATTATATCTAATTGCATAAGCAA
TATGGAATTTGAGGTCACACGTGCCCGACCGGATTACTTGCCTGAATACGAGATGAGGAGGTACAAGGTTGCTATCAGAG
ATGGTGGTGATTTCATAGACT--GATTGTGGATACTTTCAGCATAGTGGGATGTTGTGCTGTCACTCTATCAAGGTTAGT
GTCCTTGGTATTTTT-TTCTTCCTATGCAGGTTTCTATCAGC-TTGTTGCTGATCAATGTTCTTTTTCCTGATTGATCAA
GCAGGTTCTGATACGAAACGACATACTCAAAATCCCGAGTAAGAACATCGTGAAGAGGTGGACCAAAATGGCAAAGGAAG
TGCAGCCTTCAAACCTTGCTCTGCCTCATGCATCGATTCAGCCAGACGATGCTTCATACCGGCAAAATATCCTGTACATT
GCCGCTCTAGAAACGGTGAAGGAGACCTCCCTTTGCAAGGGCATGCTTGACAAGACACTAAAAGTTTTTCAGGAACTGAG
GACCGAAGCTAGACATATGCGATTGCTGGAGGAGGAAAGCCATAATGAGCCGGGTGAAGGACGGTGTGATGCAGATAATT
TCATTGCCATCACGTCATGTGAGCAGTTGCATCCGCCAAAGCGAGTGAAATCCAAAGGTAGGACAGCAACTGTAAGGATG
AAATCAAGGATGGATTATGTATCACTCTTCCAGCAAAAGAGCAAGAAGGTTGATAGTGTTTACAATCAACCAAACTTTCT
GTCAGAAATCGGAAGAGACAACACCTCTAGCGACCATCATAATGATTTGATATCCCAATACAAGAGGGTTATCAAATGTA
GCAGATGTAAGGGAGAAGGTCATAATAGGTCATCGTGCAAGAAACGCGGGTTCTGAACTGAATGGTATATCATA-TGGCG
TATTAGAAAGCTGTATTTTGTTTCAGAAAGCTCGAAAGCTCCTGGCTTTCTGAGGACGCCATAGCAGCCGGTTATGTGCA
CATTAATGCTGTACTATATTCAGGCACCTTGTCTTTTGCAAACACTAGGACGTGGTATGCAGATCTATAACTATGTTATC
ATTAGATGTCAACAAATGTGC-----------------------------------------------------------
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---------------------------TTGCGTGTGACAATCGTGTACCTTAGTA-----TCCCTATAAGTTGTGATGTT
TTTAGACGAAACGCGCGAGCATGCCTACTTAGATTCCCGCCTAGTCTCTACGTAGCAGGCATTGACATGAGCGATCGCCG
TGCAAGTGTTGGAACTCTATTTTTTTACGGAAAG-ATTACTTTATTAACTCAAATAACGGTTACATCATCAGCTAAGAAT
TTAACAAGGAAGCCAGGAGGTGCCTCGTCCCAAACAGAAGGGTCGTTCACACATCCCCATTTAGCTAATTCATGAGCTAC
TACATTG-GACTCTCTAAAACAATGCTCAAATGTAACCTTTCCAAAATCACACAATATACTCCTGCAATCATCCAACACT
GGCGATGCCGTCATCGAATGGCCTTCATTGAGATTTAGTGCATCC-----------------------------------
-------------------------------------------------------------------------ACATGCT
CAAGCCTAGCTGTAGAAGCATTAATGAAATGCCCTTTATAATCTCTGATAATTGCTCCACAAGCGCCGGAGTTTGTTCCA
ACAGAAAAGGAAGCATCAACATTTAGAACTAGATGCCCAGCTAGGACCGAAGGCCATCTGTTTATCTGTTGGAACTCTTT
TTTTTTTGAATGATAATAGTAGAGTTGCTATATTCATTGATCAAAGAGAAATGGTACAAAGAGACCGCTCAGTTAATTAA
AAGAAAACCGAGCTAAAACCCTAATAAACGGGCAAAACGCTAGCTAAACTAGGTCAAGAGCACCACAAATCGCAACCACC
GGCCAGTGACAAGCTACAAGCAACTCTCCCGACAACCACACGAACCCAAGCTCCACCG
>chr6B_1
CATCTTTTCCATGTTAACATGAAATTCATCCTGTGCAGATCAGTGCAAGGCGATGGAAGGAGCAATGGAAAACATATTGC
CAAATACAAATCATAGGTGGTGCAAGTGGCATGTATTGAGATGTGCAAAGGAGAAGCTTGGCCCTATATACGGCAAGAAG
AGTGGATTCAAACATGAGTTCCACGAAATTATAAATGATATTATTTGTGTCACGGAATTTGAGGGAAAGTGGGCTGAACT
TATAGATAAGTACAATCTGAAGGATAATCCTTATCTTGAGAATCTATATAGCAAGCGGACCATGTGGGCTAAACCATACT
TCTCCAGTGTGTTCTGTGCCGGGATGACAAGTACTCAACGCAGCGAGAGCGCAAACCACTTGCTGAAACAGTACATACCT
CGTTCATCACCTATGCACCTATTTGTCAAGCAATACAACAAGCTAGTCCAATCACGCACAGCGGATGAGGGCAGGCAGCA
ACATATGACAAAGATGGTGAGAAGCCCAAACCTAAAATATTTTGATGTGTTTGAATATTTAGTTGATGATATATATACCG
CTAGATCAATATGCATAAGATATACAAACCTGAAATGCATGAAACCTGTAGCTTAGATTGTTCAATCAACACACAAAAAG
TGTAATGCCTCACAAGCTTTTGCACCATTTGCTGAGCCTACAATTTGTTGGATGGTTGAACCTAGTATAATCAACCTCCT
TTCTGTGTGTGTATCCTTGTTTGCAGAAATGTCGAAGACTCAACGGAGGGTTTCCCTTGGAAGCTGATGCTGCCAAGATA
TATACTAAGGGCGTGTTCATTAAATTTGAAGAGGAGCTTTATCAAGCTGCTTCGTTTATTGTATCTAATTGCATAAGCAA
TATGGAATTTGAGGTCACCCGTGCCCGACCGGATTACTTGCCTGAATACGAGATGAGGAGGTACAAGGTTGCCATCCGAG
ATGGTGGTGATTTCATAGACTGCGATTGTGGATACTTTCAGCATAGTGGGATGTTGTGCTGTCACTCTATCAAGGTTAGT
GTCCTTGGTAAAAAAATTCTTCCTATTTAGGTTTCTATGAACTTTGTTGCTGATCAATGTTCTAATTCATGATCGATCAA
GAAGGTTCTGATACGAAACGACATACTAAAAATTCCGAGTAAGAACATCGTGAAGAGGTGGACCAAAATGGCAAAGGAAT
TGCAGTCTTCAAACCTTGCTGTGCCTCATGCATCGACTCAGCCAGACGATGCTTCATATCGGCAAAATATCCTGTACATT
GCCGCTCTTGAAACGGTCAAGGATACCTCCCTTT-------CATGCTTGACAAGACACTAAAAGTTTTTCAGGAACTGAG
GACCGAAGCTAGACATATGCGATTGCTGGAGGAGGAAAGCCATAGTGATCCGGGTGAAGGACGGGGTGATGCAGATAATT
TCATTGCCATCACGTCGTGTGAGCAGTTGCATCCGCCAAAGCGAGTGAAATCCAAAGGTAGGCCAGCAACTGTAAGGATG
AAATCAAGGATGGATTATGTATCTCTCTTCCAGCAAAAGAGCAAGAAGGTTGATAGTGTTTACAATCAACCAAACATTCT
GTCAGAATTCAAAAGAGACAACACCTCTGGCGACCATCATAATGATTCTGTATCCCAATACAAGAGGGTTATCAAATGTA
GCAAATGTAAGGGAGAAGGTCATAATAGGTCATCGTGCAAGAAACGCGGGTTCTGAACTGGATGGTATATCATTGTGGCG
TATTAGAAAGCTGTATTTTGTTTCAGAAAGCTCCTTA--------CTTTCTGAGGACGGCATGGCGGCCGGTTATGTGTA
CATTAATGCTCTACTATATTCAGGCACCTTGTCTTTTGCAAACACTAGGACGTGGTATGCGGATCTAAAACTATGTTATC
ATTAGATGTAAACAAATGTGCTTGCGTGTTTTTTTCAAAAAGGAGTATGACCCCCGGTCTTTGCATTTGGGAGATGCATA
CGGTTATTTTATTGACTATTCTCGAAAACCTTACAAAATATAACAACAATATACCTGAATCCGCCATCTAGGCAGCATCT
GCCGCTACTTCTATTCAAATGATGAAGGGGTGCAAGTTGGGCCACATACTCATACATCTCACCTAAGCCTAACATCTAAA
ATCGAAGGCCCCGACTGAGCCATCTGCCAGGTCCGGGGCTCAAACCGATCTGATGCACTCACATGTGTCGTCGCCATCAT
CTTCCACTGGTCCATCTTTAGAGCAGATTGAGGTGACAACCTTGGCAGGTCCTCCGCCATCGACGCCACCACGACGTCAA
ACGATGACCTTCACCTACATGAGCCTTGGCAGGTCCTCCGTCATTGACGCCACCACGACGCCAGCCGACGACCTCCACCT
ACGCGAGTCCCATCTCCAAGCAACGAACATAAATCCATGCTAGGAAAGGGCCACATCACCGCCGCCGCCCACCTCCCACA
AGCGCAACCCAACCCCAAGTTTCTCAAAGCGGCGCCTTCAAGAAGGGAACGACGCCTTGAGCGCCGCCGCCGCCCAACAG
ATTTAGGGCTTCCGCCCGGGAGACCTAGGGGAAGGTGAAGTAAGGAGATCAGTCCATACCGACGCCACCATAGAGGGAAA
CGGCGCCCTCAGCCGTCGCCGTCGCCGCGGCCGGTCGTGGCCGGCCAGAGATTTCGCCCGAACTAGATCTCCGCCACCAG
CAGCACCTCCTGTACAGAACCGGCGACCAAGAGGATGCGCGGTCCGACCAGACTGGCCCGCACGCCGAACAGGGGAGGAA
GGGAGGGGCCAGATCGTGCACACCGACCGCCATAGAAGCCGCCGCCGGCCGCCAACGACCACCGGATCCCGTCGCCCGCG
CGGCCGGGACACCGGATCCACCACCCGCACGGCTGTTAGCCACCCGTGCCAATGAAGCCGCCGCTCCAGATCCGGTGTTC
CTCACACAGGAGCAGGGCAACCGAAGCCCCGCCGCCACCTTTCTTGATGCCCCGGGATTGTCCGACGACTGCCTCAGGCG
GCGGCGAGGGAGGAGGAGGGGAAGTGCTTGCGTGTGGCGATCTTGTACCTTAGTAGTATCTCTCTATAAATTGTCATGTT
TTTAGACGAAACGCATGAGCATGCCTACTTAGATTCCCGCCTAGTCTCTACGTAGCTGGCATTGACATGAGCGATCGCTG
CGCAAGTGTTGGAACTCTAAATTTTGAC----------------------------------------------------
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>chr5B_2072
TCTTTTTTCG----------------------------------------------------------------------
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--------------------------ACGGGAAGAATTACTTTATTAACTCAAATAACGGTTACATCATCAGCTAGGAAT
TTAACAAGGAAGCTAGGAGGTGCCTCGGCCCAAACAGAAGGGTCGTTCACACATCCCCATTTAGCTAATTCATGAGCTAC
TACA-TG-GACTCTCTGAAACAATGCTCAACTGTAACCTTTCCAAAATCACACAATATACTCCTGCAATCATCCAACACT
GGCGTTGCCGTCATCGAATGGCCTTCATTGAGATTTAATGCATCCACCACTGTGCTATTGTCCATCCTTACCAGCAGTTT
AGCGCAACCCAAACTTAGGGCCAGCTTCAATCCTTCAAAAAGTGTGGCTGCTTCGGCAGCAACAACATCGGCCACATGCT
CAAGCCTAGCTGTAGAAGCAATAATGAAATGCCCTTTATGATCTCTGATAATTGCTCCACAAGCACCGGAGTTTGTTCCA
ACAGAAAAGGAAGCATCAACATTTAGAACTAGATGCCCAATTAGGACCGAAGGCCATCTGTTTATCTTTG----------
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>chr6B_2076
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-------------------TTTTTTTACGGGAAGAATTACTTTATTAACTCAA-TAACGGTTACATCATCAGCTAGGAAT
TTAACAAGGAAGCTAGGAGGTGCCTCGGCCTAGACAGAAGGGTCGTTCACACATCCCCATTTCACAAATTCATGAGCTAC
TACA-TTAGACTCTCTGAAACAATGCTCAATTGTAACCTTTCCAAAATCACACAATATACTCCTGCAATCATCCAACACT
CGCGCTGCCGTCATCGAATGGCCTTCGTTGAGATTTAGTGCATACACCACTGTGCTATTGTCCATCCTTACCAGCAGTTT
AGTGCAGCCCAAACTTAGAGCCAGCTTCAATCCTTCAAAAAGTGTGGCTGCTTCGGCAGCAACAACATCAGCCACATGCT
CAAGCCTAGCTGTAGAAGCATTAATGAAATGCCCTTTATGATCTCTGATAATCGCTCCACAAGCACTGGAGTTTGTTCCA
ACAGAAAAGGAAGCATCAACATTTAGAACTAGATGCCCAACTAGGACCGAAGGCCATCTGTTTATCTTTG----------
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>SNPs
------------------------S----SS-------------------S---------------S-------------
-------S--S-----------S-----------------S--S---------------------S-----S--------
------------------------S---------------------S------S--------------------------
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-------------------S---------------------------------------S--------------------
--------------------------------S------------S--------------S-------------------
---S--------------------------SS-SS---------------S-SSS--S----------------------
------------S-----------------S---------S--------------------------S------------
---------------------------------S---S--S---------S-S-S------S------------S--S--
--------------SS-------------S----------------------S-----------------S---------
-----------S--------------------------------------S---------S-------------------
------------------S-----------------------------------------------------S---S---
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----------SSSSS-----------SS----------S-S----------------------SS---S----S------
-S-------------------------S-----S---------------------------------------------S
-----S--------------S---------------S---------------------S---------------------
--------S--------S-----S----------SSSSSSS---------------------------------------
--------------------------------------------S---S---------------S---------------
----------------S---------------------------------------------S-----------------
-----------------------S---------------------------------------------------S----
-------S--SS----------------S------------------SSS------------------------------
---S--------------------------------------------------------S------------S------
---------------------------------SSS-SSSSSSSS-------------S---S--S------------S-
----------S-------------------------------------------------S------S------------
---------S----------------------------------------------------------------------
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------------------------------------S-S---S-------------------S------S----S-----
--------------SS----------------------------------------S---------------------S-
S-----------------------------S--------------------------------------------S----
-------------S-------------S----------------------------------------------------
----S-----------S-------------S-------------------------------------------------
----S---------------------------------------------------------------------------
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---------------------------------------S------------------------S---------------
---------------------------------------S---------------------------S-SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_146
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----------------------------------------------AAAGGAGAAGCTTGGCCCTG--------------
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>reverse_1799
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--------------------------------------CTCCTGGCTTTCTGAGGACG----------------------
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