>input_sequence_70562
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-------------------------------------------------------------ATGGCCGCGCCGCATGGCA
CCGTGCTCGGGGGCGCCGACTCGTTCCCGCAGCTCCCGCTCGTCGTCCGCCCCGCCGGTCAGCCTCCGGCCGACGCCACC
ATCCGCCTCTTCGGCTGCGACTTCTCCAACGACGCCGCCGCTGCCGCCGACCAGCTGCCCCCCAAGGCGGA------GGC
GGCGGTCGGGGAGGGGGAGACCCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGGG
GGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGCGCCGGGCGCACCTCGAGGCCTCCCTCGCCGCCGCCTACCTC
CCGGCCGGCACGCACGTCTACGGCGCCCTGTTCGGCGGCTACGGCCACCACCAGGCCGCTCCCATGCCGCCGCCGC---A
GTACCCGGTGTGGCCGGGCATGTACGGCGGCGTGGCGCGATCCGCGGCGTACGGCGGCATGCCCGTGCCGGGGATGGGGT
GGAGGCCGACGCCAGTGGGTGCTGGTGCTTTTGGTGCCGCCGGCCGGCACGATGAAGCGACGGCGGCGGCGGCTGCTGGG
ACCGGAGAGGTGGCCGGTAAGGATGGGAATAATGTGGCGATGAGCGTGGTGACGTCGCTGCCGTCGTGCCTCACCGGCGG
GTCGCCCACGGAGATCGGTAGGTCCGAAATGATGGGGCAGAAGGAGGGCGTTGTAAGCCTGGACCTCTGCCTGTAG----
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>chr7A_1_TraesCS7A01G167000
GAGATCGATCGATGCAGTTGACGATCCGAGAAAAGTCATGGAAGGGCAGCAAAGCATGCAGGAAAAGCTAGAAAGACAAG
CTATCCATGGCATGCAATGCTGCAAAGCAAGGGCATGTAGATCCCACCCGGAAAGGGCACACCCGAGTCCATAACCATGC
CGATCGGACAGCCGGAATTGGTGATCGTTCGGAGTTCAGCGAGAGAGCGATCGGTCCATGCAGTT---AAAGGGCGAGAC
TTTAGCATGCATACAGCGTCGA-GGGCCGGCCCGGTAATCATATGTGGCTGCAGGTGCCAGCGCAAC----------AGC
ACAGCCGCGTCCCGTCTCGTCTCTCCCCCCGCCCTGCCGCCGTCCACGGCCGGAAGGACCACCGGCG---------CCGC
CCGTGGTTGCGCCCATCCACGCATCCATGCATGGGTCACCACGCACTGTGCAAGCATGTTCGCGAGGTCATGGAGCACGC
AGTACCACGCTCTTAATTGCCGTTCACAAATTTCCCTAATTTTGTTGCTCATCTTCACATAGACTCTGTCTGAGCTTCAA
ATTTTGGTAACGCGGGTTGGGTGTGACTTTTGGCAGCGGATCGCACGAACATAGCACCCAATGC--------GCGCTGCC
CTATCCTCCTACATCACGTATGCATGCACGTACACGTACTGCCTAGCGAA------------------------TGGTGA
TGGGGCAT------ATAGTCTTATCGGCCATGCATGCA------------------------------------------
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-------------------------------------------------------------------------TGCATGC
A-GTACGTGCGCAGGGCCAGGCGGGCAGCTGCGGTACACTGCCGATCGGTTTGCGTGAGTGTACTTGGAGGGTGACGAGA
TGGTTAGCCTTCAATGAGCGCCCCGGCTCCTACGTACTTCGGTCCCCCGGCGGGGCCTGTCCCCTCCGCCCGCCCGGCCT
GCAGACGCCCGGCCGTCTCTCCATGTCGTCGTCTCGCCATAAAACCAC-CCGCCCCCTTGCCCTCTTCCAGCACACAAAG
TCA---CAGACTCAACGCCGGTCACTGTTCAGGAAGCTAGCTAGCCAGCCAGCTCTCCGCCATGGCCGCGCCGCATGGCA
CCGTGCTCGGGGGCGCCGACTCGTTCCCGCAGCTCCCGCTCGTCGTCCGCCCCGCCGGTCAGCCTCCGGCCGACGCCACC
ATCCGCCTCTTCGGCTGCGACTTCTCCAACGACGCCGCCGCTGCCGCCGACCAGCTGCCCCCCAAGGCGGA------GGC
GGCGGTCGGGGAGGGGGAGACCCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGGG
GGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGCGCCGGGCGCACCTCGAGGCCTCCCTCGCCGCCGCCTACCTC
CCGGCCGGCACGCACGTCTACGGCGCCCTGTTCGGCGGCTACGGCCACCACCAGGCCGCTCCCATGCCGCCGCCGC---A
GTACCCGGTGTGGCCGGGCATGTACGGCGGCGTGGCGCGATCCGCGGCGTACGGCGGCATGCCCGTGCCGGGGATGGGGT
GGAGGCCGACGCCAGTGGGTGCTGGTGCTTTTGGTGCCGCCGGCCGGCACGATGAAGCGACGGCGGCGGCGGCTGCTGGG
ACCGGAGAGGTGGCCGGTAAGGATGGGAATAATGTGGCGATGAGCGTGGTGACGTCGCTGCCGTCGTGCCTCACCGGCGG
GTCGCCCACGGAGATCGGTAGGTCCGAAATGATGGGGCAGAAGGAGGGCGTTGTAAGCCTGGACCTCTGCCTGTAGTCCG
TTGCAATTGTT---GTCGACCTAGGTGGTATCTTTACCTTAATTGTTCAGGTCAATCACCCTGTTTAGTCTTATATAATT
ACTGTTATCATCTGTAATCGACGGCGTTCATTTGTTTTTTTTATAAAATTAGAATGCAAGTTAAGTTGGCATGCATTT--
--TGAATAATGTG---------TACTTCTCTCCATTTTCTTTAGCTTGGTCATGAGCGATTCAGTGCCTAAGACTCT---
----GCTAGCAAGTTCGGTTCCAGATGATTTCGTAGTTTCAAACTTCACAAAAGTTTGGCATGACTGCTTTTTTTTTTCT
TGAGCGGGCATTTTTATTAGGAGAGAAAGCCCAAAATGATTGTACAATCATGATTACGCAATTGAAAACTGTATTGCTAG
TCAAGACAGTGACT--GGTTCAGTCGACTTGGAATGTCTCCGTCAACCAATGATAGCTGTTCCATCACTGCTAATATCCT
CTCATTAAAGATAATTATTCAGAGTCCTCACCTGTTGGAAAAAGTTTAAAGTCGGTCTAGTCGTCCGGATGTATATAGCA
AAACTGGGTTCAGCATTCATACGCGATTGTCATAGCACCGATCAAGTGGCAGAGCTGGGTTCCCGTCGTTGTGAAGTGTG
AAGTCGTATCATGGTCCTGTTTGGATTCATGGATTAGAATTAGTTTGGGTTGGTTTGGACTTAAGTGACCCAAAAATATT
CAAACACGAGAGTTAGTTATGCATCTAACCCATCTAAGAAGCGCTTATTTGGGTTAGTTTTTTTCAGGATCATTATTTTT
TTTCTCTCGCTTTTCCCGCAACAGATCCCTTCTTATTTTTTAAGCTTTTCGTCCTCTCCCTCTCTCTCGCATCGCTTGTG
AAGGCGCATTGTCGTATCCGTGCTTCATCTAACCCTGCCATCCAAACATCTCTTTGGTTAGAGTTAGCTCAGGGTTAGTT
TAGGGTTAAAATTTAACTCTTCTAACCTCTAACTGAGTTAGAGTATCCAAACAGGGTCCAT
>chr7D_177
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----------------ATTGATGGTCGTTCGGAATTCAGT----GAGCGATCGGCCCATGCAGAGTTAAAAGGTGGAGAC
TTTAGCATGCATGCAGGGTCCAGGGGCCGGCCCGGTAATCATATGCGGCTGCAAAGTGCTAGCGTAGCAGCAGGCAAAGC
ACCGCCGCGTCTCGTCTCCCCCCTACCGGCTA----CCGCCGTCCACGGCCGGAAGGAAGGACCACCCGCGCCTGCCCGC
CCTTGGTGCTCATCCTGAGCCCATCCATGACCACAGTGCA--------TGCATGCAAGTTGGCAAGGTCATGGAGCACGT
AG---CACGGTCTTAACTGTCACTCAGAAATCTCTCTTATTTTACGCC-----------------------GAGCTTGAA
ATTTCAACACA---GGTTGAGTGTGACTTTTGGCAGCGGATCGCACGAACATA-CACCTAATGC--------GCGCT---
-----------CATCACGTATGCATGCACGTACTACCACTATACTACAACCTACTAGCAACGTAGTGGTAGCACTGGTGA
TGGAGCATATAATAATAGTCTTATTGGCCATGCATGCAGGGCCGGGCTCATAGTGGTGCCAAATGTGCAGCCCGCACAGG
GCCCATAATTTTGGGGGGCCCCAATTTTTTTTATATAGGCCTGGTAATTCTGGAAAAAAAATGCGTAGCAGCTGCGGCAC
TAGCCCGCTAGGCGCCGGAGCTGGGCCTGAGTCGAGGCCATCGAGCGCTGGACCTCGTCCGCTCGTCGCTTGACTCGATC
GATCTTTCCCAAAGAAAAAAGGAAACTGCTCTCTAGCGATGCAAATGGGATCGTGGGTCTAAAAAAAGATCGCTATACCA
GTCAATCGGGATCGCCTCAATCGGGAAACCAACAGGCCAACAATTGTCCCGTCGGCGCCGCTACAGGAGTCAGGAGATGA
AAAAAAGGAGACGAGATCGTCTCGTCGGTCGTCGCCTTTGCCTCATCAGAGCGATCGGATTGTGGCCGCTGTCGTTGCCT
TCGTAGCTTCCTCTCCTAATTTTCAGACTCTGTCGTCTCGTCGGATCAATCTGTGACCCAGGGACGGATCCAGGATGAAA
GTTGAGAGGGGGCAAAAATTTTTATTTTTTTTGCATGGAGATGTGTAGGAACTTATGGCTATCATTTGCAAACACTTACC
CCACAATCAGACATATATGCTCAATCATTCCATGAAAGTTTTGAGCTATCACCTCATTAATGATTTTGTCAAATAATTCA
TTTTGTACAAGCAAATAAGGCTACTGCTGAAAAATACGATCGTCCATTTCTTTCTACTCTCACATACTAACCCATTTTTA
ATAAATTACTACGTCAAGCTAGACTCGATCAACCCACGAACACGGAGCTCAAGCAATGCCGCTGGACACCAGCGATTTTT
GGAAATTCTCACTAAGTTTGCACTAATCATTTTAATCTGGAAAGATGACATGACTAATTTGGAGTTGCCCCATAGGATCT
ATTTTATAGCTTCGTCCCTGAGTCAAACTAATTGACAGTTCGTGTGGTATCACATAGTGGAAATTTTATGAAACTCCTTA
ACTTTGTATGTGGAAATTGGAAAAGAAACAAGAACAGAAAGCAAATAAAGAATATGATTGATGAATTGACCCTAGGGTTT
ACCTCGATCGATAAAAACACGTAGTGCTTGTACCGATCTTCTGAATCCAAGAACCAAAGAACGGCAAGGACCAGCCGACG
TGCGAGGCGCAGATTGTTGCCGGAGCGATGGGGCAGTCTGGCGAGGTAGCTTCACATCTCGCGTGGTCAGGGCGGTGGCA
GGGCACGTCTAGCAGTCTAGGACCCCATCTCCGTCTTTTTCTTTAGGGGTACCCCATCTCCTCCGTCTAGGCTCGTGGCT
TGTGGCTCGTGCCTGCGTGCGTTTCAAGGCCTCGCTCGTACGCATACCATATAGGCCGTCGTGCGGGCCTCTATGTGGGC
TCTGTAGCACTGGCTGACGGGCTGCTTAGGCTTTGAAAATAACAAGAAAAATGGAAGAAGTGGGGGCAAATGTCATGGGC
TCAGTGGGGCAATCCTTTGTACTCTGGACATAGTATTAAGTGGGCCAAAAATCAAGTGGGGGCATTCGCCCCAGAGAGCT
GTACGTGCGTTCGCCCCTGCTGTGACCGGCTGACCAACTCCAGCCTCCAGGTGCTTAGCGAATCCTCCCGTTCCTACTCT
AAATTCTAATTCTTAATTTCCTAATTAACTTTCGGCAGGGATCGTTACTTTATTAAAGATTGGCTCTTACCTCCTTTACG
AAAGATCACAGTATAGTAGTTCAACCGGACATGACCCAAAACTAGGTGAATTAGACGATTCATCTAATTGTAAAACATTG
ACATTATATTATTTGCATTATAAATTTTTCCTGTGAGATATATATACACACTATATTGCTCGTTAGTTTTCCCGGCAAGT
TTTTTTGCTCGTTAGTTCATTTTTTTTAACGAGATAGGGCCCCATTTTTGTTTCGCACAGGGCCCCTAATTGATGCATGC
ATGTACGTGCACAGGGCCAGGCGGGCAGCTGCGGTACACTGCCGATCGGTTTT-----GTGTACTTGGAGGGTGACGAGA
TC---------------GCGCCCCGGCTCCTACGTACTTCGGTCCCCCGGCGGGGCCTGTCCCCTCCGC-----------
--------CCGGCCGTCTGTCTAGCTCGTCGTCTCACCATAAAACCACGCCACACCCTTGCCGGCTTCCTGCACACAAAG
TCATCACAAGCTCAACGTCGATCACTATTGAGGAAGCTAGCTAGGTAGCCAGGCATCCGCCATGGCCGCGCCGCATGGCA
CCATGCTCGGGGGCGCCGACTCGTTCCCGCAGCTCCCGCTCGTCGTCCGCCCCGCCGCTCTGCCTCCGGCCGACGCCACC
ATCCGCCTCTTCGGCTGCGACTTCTCCAACGACGCCGCCGCTGCCGGCGACCAGCGGCCCCCCAAGT------------C
GGAGGCCGGGGAGGGGGAGACCCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTCGGGG
GGCACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGCGCCGGGCGCACCTCGAGGCCTCCCTCGCCGCCGCCTACCTC
CCGGCCGGCGCGCACGTCTACGGCGCCCTGTTCGGCGGCTACGGCCACCACCAGGCCGCTCCGATGCCGCCGCCGCCGCA
GTACCCGGTGTGGCCGGGGATGTACGGCGGCGTGGCGCGGTCCGCGGCGTACGGCGGCATGCCCGTGCCGGGGATGGTGT
GGAGGCCGACGCCAGTCGGGACCGGTGCTTTTGGTGCCGGCGGCCGGCACGATGAAGCGACGGCGGGGGCGGCTGCTGGG
ACCGGAGACGTGGCCGGTAAGGATGGGAACAATGCGGTGATGAGCGTGGTGACGACGCTGCCGTCATGCCTCACCGGCGG
CTCGCCAGCGGAGATCGGTAGGTCCGAAATGATGGGGCAGAAGGAGGGCGTTGTAAGCTTGGACCTCTGCCTGTAGTCGG
TTGCAA---TT---GTCGATCTAGGTGGTATCTTTACCTTAATTGTTCAGGTCAATCACCCTGTTTAGTCTTATATAATT
ACTGTCATTATCTGTAATCGAGGGCGTTCATTTGTTTT-----TAAAATTAGAATGCAAATTAAGTTGGCATGCATTT--
--TGAATAATGTG---------TACTTCTCTCCATTTTCTTTAGTTTGGTC----GCGATTCAGTGCCTGAGTCTCCGTT
G-------GCAAGTTCAGTTCCAGATGATTTGTTAGTTTCAAGCTTCACAAAAGTTTGGCATGACTGCTTTTTTTTTTCT
TGAGCGGGCATTTTTATCAGAAGAAAAAGCCCAAAATGATAGTACAATCATGATTATGCAATTGAAAACTGTAT---TAG
TCAAGACAGTGGCTA----TCAGTCGACTTGGAATTTTTCGGTCAACCAATGATAGCTCTTCCATCACTGCTAATATCCT
CCCATTAAAGACC-TTATTCAGAGTTCTCACCTGTCGCAAAAAGTTTAAGGACGGTCTAGTCG-----------------
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>chr7B_552
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--------------GGCTGAGTGTGACTTTTGGCAGCGGATTGCACGAACATAGCCCCTAATGCACCCTGCGGCCCTGCA
CTATCCTCATACATTGCGT----ATGCACGTACACGTACTGCCTAGCGAA------------------------TGGTGA
TGGAGCAT------ATAGTCTTATTGGCCATGCATGCA------------------------------------------
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-------------------------------------------------------------------------TGCATGC
ATGTACGTGCGCAGGGCCAGGCGGGCAGCTGCGGTACACTGCCGATCGGTTTCTGTGCGTGTACTTGGAGGGTGACGAGA
TGGTTAGCTTTCAATGAGGGCCCCGGCTCCTACGTACTTCGGTCCCCCGGC-----CTGTCCCCTCCGCCCGGCCGGCCT
GCAGACGCCCGGCCGTCTGCCTATGTCGTCGTCTCACCATAAAACCACGCTGCCCCCTTGCCCGCTTCCTGCACACAAAG
TCA---CAAGCTCAACGTCGGTCACTGTTGAGGAAGCTAGCTAGCTTGCCAGGCATCCGCCATGGCCGCCCCGCATGGCA
CCGTGCTCGGGGGAGCCGACTCGTTCTCCCAGCTCCCGCTCGTCCGAGTCGCCGCCCAGCAG---CCGGCCGACTCCACC
ATCCGCCTCTTCGGCTGCGACTTCTCCAACGACGCCGTCGCTGCCGGCGACCAGCTGCCC---AAGGCGGACGCCGCGGC
GGCGGCCGGGGAGGGGGAGACCCGCAAGTTCGAGTGCCACTACTGCTGCCGCAACTTCCCGACGTCGCAGGCGCTGGGAG
GACACCAGAACGCGCACAAGCGGGAGCGGCAGCACGCGCGCCGGGCGCACCTCGAGGCCTCCCTCGCCGCCGCCTACCTC
CCGGCCGGCGCGCACGTCTACGGTGCCCTGTTCGGCGGCTATGACCACCACCAGGCCGCTCCGAT---GCCGCCGCCGCA
GTACCCGGTGTGGCCGGGGATGTACGGCAGCGTGGCGCGGTCCGCGGCATACGGCGGCATGACCGTGCCGGGGATGGTGT
GGAGGCCGACGCCAGTGGGTGCTGATGCTTTTGGTGCCGCCGGCCGGCACGATGAAGCGACGGCG---GCCGTTGCTGGC
ACCGGAGAGGTGCCTGGTAAGGATGGGCACAATGCGGTGATGAGCGTGGTGGCGACGCTGCCGTCGTGCCTCACCGGCGG
GTCGCCCACGGAGATCGGTAGGTCCGAAATGATGGGGCAGAAGGAGGGCGTTGTAAGCTTGGACCTCTGTCTGTAGTTCG
TTGCAA---TTACTGTCGATCTAGGTGTTACCTTTACCGGAATTGTTCAGGTCAATCACCATGTTTAGGCTTATATAATT
ACTGTTACCATCTGTAACCGAGGGCGTTCATTTGTTTT-----TAAAATTAGAATGCATATTAAGTTGGCATGCATTTAA
TTTGAATAATGTGTACTCCTACTACTTCTCTCCATTTTGTTTAGCTTGGTCATGAGCGATTCAGTGCCTACGACTCCGTT
AGGCGTTAGCAAGTCTAGTTCTAGATGAATTCTTAGTTTCAAACTTCACAAAAGTTTTGCATGACT--TTTTTCTTTTCT
TGAGCGGGCATTTTTATCAGAAGAAAAAGCCCAAAATGATAGTACAATCATGATTATGCAATTGAAAACGGTAT---TAT
TCAAGACAGTGACTATGGTTCAGTCGACTTGGAATTTCTGAGTCAACCAATGACAGCTCTTCCATCACTGCTAATATCCT
CTCATTAAAGACC-TTATCCAGAGTTCTCACCTGTTGGAAAAAGTTTAGAGCCGGCCTAGTCGTCAAACGGAAGCGC---
-------GTTCAGCATTCATACGCGATTGTCATAGCACTGATCAAGTGACAGAG--------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----S--S---------S-----SSSSS----------S--------SS--------SS-----
------------S---S---S------------------------S-------SSSSS-SSSSSS-S-------------
--S--------S------SS-S--S--SS-SSSSSS----------------------SSSS-SS-S-------------
--S----SSSSSS-S-SSS-S--------SSSSSSSSS-SSSSSSSSS----S---S---S--S---------------S
--SSS----S------S--S-SS---S----S--S--S-----SSSS-SSSSSSSSSSSSSSSSSSSSSSS------S--
----SSSS-SSSSS-----S--------------------------------------S--------------------S
--------S-----------------------------------------------------------------------
---S--------------------S-------------------------------------------------------
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----------------------------------------------------SS---S----------------------
--------S---------------------------------------------------------------S-------
------------------S--S-------------S---------------------------S-----S----------
--------SS-------S-----------S---------------S------SSS-------------------------
---------------------------------------------------------S----------------------
----------------------------------------------S---------------------------------
-----S--------------------------------------------------------------------------
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---------S----------------------------------------------------S-----------------
------------------S--------------------S-------------------------------------S--
------------------------------------------------------------------S-------------
-----------------------------S----S--S----------------S-------------------------
----------------------------------------------------------S---------------------
------SSS----------S------------------------------------------------------------
---------------------S----------------SSSSS----------------S--------------------
----------------------------------------------------------------------------S---
-----S----------S---------------S-----------------------------------------------
-----------------S--S---S---------------S---------------S-----------------SSS---
-----------------------------------S----S-----------------S---------------------
-----------SSS-----------S-------------------------S-------------SSSSS-S-SSSSSSS
SSSSSSS-------------------------------S---------S-----SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2916
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----------------CTCTCCATGTCGTCGTCTCG--------------------------------------------
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>reverse_4575
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--------------CCCGCAACAGATCCCTTCTT----------------------------------------------
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