>input_sequence_70545
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-------------------------------------------------------------------------ATGCAGG
GAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAACGGC------
GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGACTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTACGTCATCTTTG
ATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGGCTATGACCAG
CA---CGGCAACAACGGCGGCTATGATCACAACTACA---------------------GCGGCGGCCACGACGGCGGTAA
ATGCTCGACTGGGCAGAAGGAGGACAGCGACGAGATCGACGCGCTGATGAGCTCCTGGGACGGCGAGGAGGAAGACGACG
TGCTGAGCACGGGTCGCACTTCAGGGTGCCGCGGCGACGGCTCCCCGGACTCCACGTGCTCCCCCGGGTACGTGGTGAGC
GTCAGCCCGAGTGGC---------------GGCGGGGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACTCCCGCCGCCCTCGACGAGGCCGTCAAGTACCTCAAGTCGC
TCAAGGTGGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG---------------------------------
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>chr4B_1_TraesCS4B01G309400
AAATGGTCTTTTACTA--TCTTGGTGATAATGAAGATATTGAAATTCCCACCAATTAACCTGGGATTATGATTACCACGA
CAAATATAGACCAGGTCCTTGAACTTCTCCTGAGCAGCACCATACACAACAACTAAGCTCCATGAGAAGGTGCCATACTT
GTTCCAAAGGTGGAATTCGATGTGATATTCGCCCTTTGAAACAGCGCAC-GGTACATCAATGTTGAATGGATGCCAAGTA
AAATTCCACTCGGCCCTCCAGATGCAGGCAAGACGTGCCAGACATTGTCAAGACCACATGAAAGGTCATCTAAGACATGT
TTCTGAAAACAACGTCTAGTGGATTTCGAAATGGCCACAAAGTATAAATCATGACCCCTCACACAATTGACAATATGTTT
ATGCTTAGCCAAGTCACTCAACCTCCGCTATTCCAAAACATGTCTGTCATGATGAACCATCTTTAAATTTGTAAAGCCTA
GCTCGACCCGGGCAGTAGTA-GATTTAAATGCTACATCTATTTGTCGGATTTGCACACATAAATTAGTTTCTACTCTTAA
TCACAGATTGCACCTTAATACATTTTTCTTTTAACGAGGGTTATATGCTACTCCCTCCGTTCACTTTTATAAGATGTTCT
AACTTTTCTCAAATCGGATGTATATATATCCGTTTTTAATGTGTTTGTTCACTTATTTTAATGTGTTTGTTCACTTATTT
CAATCCGCGTGTATAGTATTAAAAGAAAAGTCCACGTTCTGGCA------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------ATGTATGTACTTCCTTT----
-----GTTTC-----GCTCTGCTCTCACACTTGAGAATGTATCATAGGAGTACATCGCAGTTCCATAATACTGATGCTTG
CAGTTCCTTTTCTTTTAACTTCTATCTGATTGTTTGCTCATGCCTACCACTTGCAGGCGGAATACTTCAGTCGAAATCAA
CACCATTTTTCTCGAATTCCCCACAAAACCAATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAAGTGATGCAGG
GAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAACGGC------
GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGACTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTACGTCATCTTTG
ATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGGCTATGACCAG
CA---CGGCAACAACGGCGGCTATGATCACAACTACA---------------------GCGGCGGCCACGACGGCGGTAA
ATGCTCGACTGGGCAGAAGGAGGACAGCGACGAGATCGACGCGCTGATGAGCTCCTGGGACGGCGAGGAGGAAGACGACG
TGCTGAGCACGGGTCGCACTTCAGGGTGCCGCGGCGACGGCTCCCCGGACTCCACGTGCTCCCCCGGGTACGTGGTGAGC
GTCAGCCCGAGTGGC---------------GGCGGGGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACTCCCGCCGCCCTCGACGAGGCCGTCAAGTACCTCAAGTCGC
TCAAGGTGGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGGCAACGCAGGG
CGACTCAATGAGCTCAATGATGGAGGCGGAAGACCGGGTAGTTTGGT---GCTCCTTTTTGCACTGCCAGTGCCATGATT
TCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT------------------------------------
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-------------------------------------------------GGATGGTGTTGTAACTATCAGGCCGATTATA
TACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCACTGCACAGTTGCTTACCA---TGTTGTCGTTGTTTTGCGCTTA
GTGCTTTTGAATAGTGTTTGTGTTTACCTAGGCACATATTACAAGATCACTAATCAAGGGTATCTTTTGCAATGATTATT
CCCACCTTGAGTTAAGCATGTGCGTCATTTGTCGCGACTTGTGGTTTTC--TTTTTTTAGATTCGTTTATTCAAAATATT
TTATCTCTTAAACTGTGCATCAAAATCCTGAACCG-TTTCACTATTGAATTTCTCGTGTCGAGATCTTTCAAAGTAGATC
TCATGTCAAAGTAGATCCCTTGATTACTTCTCCCCATATATATAGAGCTCAATATTGGTGGGCCGCCTACTGAATTAAGT
GAATCACGCGTAGTCGCGAGAACTATATCTCGCTTATAGCAAAATTAAAGAACCTCTCGCCTGAATGATCCGCAGTAATG
GGTCGGCCACCTACTAATGCACAATTAAAACAAGAAAAATAGAGAAAAAGGGAGCACCCAAGGATCGATCTCAAGTGTTC
TTGGTGCTGAGTAGCAATGCTAGCCATAGAGGCATTTGTCCAATTCATACTAAAATAGAAGATGCGATCAACTTGAGGGA
AAAGAGAAGGATTTTCACTGTTTATTTCTCCGTATTTGGTTTTTTCTTTGTTTATTCATTGATTTTCTTTGTTTTTCCTA
TATTTCATTATTTTTTTTCTCGGTTTTCACTGAATTTTTTTCTTTTATTTCCTTTTTTATTCATTTACTTGTTTCTTTTT
TGTTTTTTATCGGTTTTATTTGTTTCT
>chr4D_1
AAATGGTCTTTATTCTTGTCTCGGTGATAAGGAAGATATTAAAATTCCCACCAATTAACCTGGGGTTATGGTTAACACGA
CAAATATTGACCAGTTCCTTAAACTTCTCCTGAGCAGCACCATACACAACAACTAA-CTCCATGAGAAGGTGCCATACTT
GTTCCAAAGGTGGAATTCGATGTGATTATCGCCCTTTGAAACAGCGCACGGGTACATCAATGTTGAATGGATGCCAAGTA
AAATTCTACTCGGCCGTCCAGATGCAGGCAAGACGTCCCAGACATTGTCGAGACCACATGAAAGGTGGTCTAAGACATGT
TTCTGAAAACCACATCTAGTGGATTTTGAAATGGCCACAAAGTCTAAATCATGACCCCTCACACAATTGACAATATGTTT
ATGCTTAGCCAAGTCACTCAACCTCCGCTATTCCAAAACATGTCTCTCATGATGAACCATCTTTAACTTTGTAAAGCCTA
GCTCGACCCGGGCAGTAGTA-GATTTAAATGCTACATCTATTTGTCGGATTTGCACACATAAATTAGTTTCTACTCTTAA
TCACAGATTGCACCTTAATACATTTTTGTTTTAACGATGGTTGTATGCTACTGCCTCCGTTCACTATTATAAGATGTTCT
AACTTTTCTCAAATCGGATGTATATATACCCGT----------------------TTTTAATGTGTTTGTTCACTTATTT
CAATCGGCGTG--TAGTATTAAAAGAAAAGTCA-----------------------------------------------
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--------------------------------------------------TGTTCTGGCATGTGTGCACTTCCTTTTCAG
TCCTTGTTTCGCTCTGCTCTGCTCTCACACTTGAGAATGTATCATAG---TACATCGCAGTTCCATTATACTGATGCTTG
CAATTCCTTTTCTTTTAACTTCTATCTGATTGTTTGCTCATGCCTACCACTTGCAGGCCGAATACTTCAGTCGAAATCAA
CACCATTTTTCTCGAATTCCCCACAAAACCCATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAAGTGATGCAGG
GAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAACGGC------
GGAGCATACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGACTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAATAACTACGTCATCTTTG
ATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGGCTATGACCAG
CA---CGGCAACAACGGCGGCTATGATCACAACTACA---------------------GCGGCGGCCACGACGGCGGTAA
ATGCTCGACTGGGCAGAAGGAGGACAGCGACGAGATCGACGCGCTGATGAGCTCTGGGGACGGCGAGGAGGAGGACGACG
TGCTGAGCACGGGTCGCACCTCAGGGTGCCGCGGCGACGGCTCCCCGGACTCCACGTGCTCCCCCGGGTACGTGGTGAGC
GTCAGCCCGAGTGGC---------------GGCGGAGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACCCCCGCCGCCCTCGACGAGGCCGTCAAGTACCTCAAGTCGC
TCAAGGTGGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGGCAACGCAGGG
CGACTCAATGAGCTCAATGATGGAGGCGGAAGACCGGGTAGTTTGGT---GCTCCTTTTTGCACTGCCAGTGCCATGATT
TCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT------------------------------------
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-------------------------------------------------GGATGGTGTTGTAACTATCAGGCCGATTATA
TACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCGCTGCACAGTTGCTTACCATGTTGTTGTCGTTGTTTTGCGCTTA
GTGCTTTTTAATAGTGTTTGTGTTTACCTAGGCACATATTACGAGATCACTAATCGAGGGCACCCTTTGCAATGATTATT
CCCACCTTGGGTTGAGCATGTACATCATTTGTTGCAAACTGTGGGTTTTCTTTTTGTGAGATTCTTTTACTTGAAATATT
TTATTTTTTAAGCCATGCATCAAAATCCTGAAGCGTTTTCACTATTGAATTTCTCGCATCGAGATCTTTCAAAGTAGATC
TCATGTCAA-----------------------------------------------------------------------
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>chr4A_1
AAATGGTCTTTATTCTTTTCTCGGTGATAATGAAGATATTAAAATTCCCACAAATTAACATGG-ATTATGGTTATCACTA
CAAATATTGACCGGTTCCTTAAACTCCTCCTGAGCAACACCATACACAACAACTAAGCCCCATAAGAAGGTGTCATACTT
GTTCTAAAGGTGAAATTTGATGTGATACT--CCCTTTGAAACAGCGCACGCGTACATCAA----GAATGGAAGCCAAGTA
AAATTCCACTCGATCGTCCATATGCAGGTAAGACATGCCAGACATAGCCGGAACCACATGAAAGATGGTCTAGGACATGT
TTCTAAAAAACACGTCTAGTGGATTTCGAAATGACCACAAAGTCTAAATCGTGACCCCTCACACAATTGATAATATGTTT
ATGCTTAGCCAAGTCACTTAACATCTGCTATTTCAAAACATGTCTCTCATGAGGAATCATCTTTAAA-TTGTAAAGCCTA
ACTT-ACGCGGGCTGTAGTATGATTTAAATGTTGCATCATT--------------------AATTACTTTGTACTCTTAA
TCACATATTGCACTTTAATACCTTTTCCTTTTGACGAGGGTTATATGCTACTCCCTCCGTTCACT---ATAAGATGTTTT
AACTTTTTTAAATAA-GATGTATATGACGT-GT----------------------TTTTAATGTGTTTATTCACTTATTT
TAATATGTACTTCCTCTTTCAAAATTCTTGTCTTAGATTTGTCTAGATCCGTATCTAGACAAATCTAAGACAAGAATTGA
TACATCTGTATCTAGACAAATCTAAGACAAGAATTTTGGGAAGGAGGGAGTACTATGTAGTTTATATTAATAAGATATCC
AAAACGTATTCTAATAGTGAAGCGGAGGGGGCAGTAGTGTACTCATGTCCTGTTCTGGCATGTATGCACTTCCTTTCCAG
TCCTCGTTTC-----GCTCTGCTCTCACACTTGATAATGTATCATAG---TACATCGCAGTTCCATTACACTGATGCTTG
CACTTCTTTTC--TTTAACTTCTATCTGATTGTTTGCTCGTGCCTACCACTTGCAGGCCGAATACTTCAGTCGAAATCAA
CACCATTTTTCTCGAATTCCCCACAAAACCCATAAACATCTCTAGGAGTTGAGCAGCTCGCAGCAGTGAAGTGATGCAGG
GAGGTCCAGGCTACGGGTACGGCGGCTAC---GGCTACGGTGCCGGCTATGACATGACCGGGTACGGCAACGGC------
GGAGCGTACTACACCAACGACCGGTACCCCACGCCGGCACCGGCGCCGGCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGATTTCCCGGCGCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATGCCTGCCCCAAGAACTACGTGATCTTTG
ATCAGACCTACGACCGGAGCAGGGTCATGTACAACCCGTCGCTGCCCAACAACTTCGGTTCCTCCGGGGGCTATGACCAG
CA---CGGCAACAACGGTGGCTACGATCAC---------GGCAAGGGCACCTACT------------ACGGCGGCGGCGA
ATGCTCGATCCGGCAGAAGGAGGACAGCGGCGAGATCGACGCGCTGATGAGCTC---------CGAGGAGGAGGACGACG
TGCTGAGCACGGGTCGCACTTCAGGGAGCCACGGCGAGGGCTCGCCGGACTCCACGTGCTCCCCCGGGTACGTGGTGAGC
GTCAGCCCGAGTGGC---------------GGCGGAGGTGGCGAGAGGAAGAAAAACCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGCCCTCGACGAGGCCGTCAAGTACCTCAAGTCGC
TCAAGGTAGAGGCCAAGAAGCACGGGGTGCGCGGATCAAGAAGCTAG------ATAGCGACCTCACATGGCAACGCAGGG
CGACTCAATGAGCTCAATGATGGGGGCGGAAGACCGGGTAGCTTGGT---GCTCCTTTTTGCACTGCCAGTGCCATGATT
TCACCTCGTGGAGCTCCCGAGGATCAGTGCAAAGGAATGATGAT------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GGATGGTGTTGTAACTATCAGGCCGATTATA
TACACCGTGTTTTTGTTTATCCCCGTTGGGCTCCGCATTGCACAGTTGCTTACCATGTTGTT---GTTGTCTTGCGCTTA
GTGCTTTTGAATAGTGTTTGTGTTTACCTAGGCACATATTACCATTTCACTAATCAAGGGTACCCTTTGCAATGATTATT
CCCACCTTGGGTTGAGCATGTGTGTCATAGCAACCTGGGA---GTTTTC--TATTTTTTTT-------------AATATT
TTATCTCTTAAACCATGCATCCAAATCCTGAACCGTTTTCTCTATTGAA-TTCTCGCATCGAGATCATTCAAAGTAGATC
TCATGTCAATAGAT------------------------------------------------------------------
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>chr7A_1016
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--------GGCTACGGGTACGGCTATGGCGGTGGCTACGGCGCCGGCTATGACATGGCCGGGTACGGCAACGGAGCCGGA
GGAGCGTACTACACCAACGACCGGTACCCCGCGGCGGC------GCCGCCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGACTTCCCGGCTCCGCTCACCGGGCTCGAGTTCCAGCCGTCGGATACCTGCCCCAAGAACTACGTCATCTTTG
ATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGGCTACGACCAG
CAGCACTGCAACAACGGCGGCTACGATCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGGACGGCGGCGA
GTGCTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGACGGCGACGAGGAGGACGACG
TGCTGAGCACGGGTCGCACGCCCGCGTGCCGCGGAGGGGGCTCGCCGGACTCCACCTGCTCCTCCGGGTACGTGGTGAGC
GTCAGCCCGACTGGCAACGCCACCGGCGCCGGCGGAGGCGGCGAGAGGAAGAAGGAACGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGTCCTGGACGAGGCCGTCAGGTACCTCAAGTCGC
TCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGATAGCGACCTCACATGGCAATGCAGGT
CGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCACTGCCATGATG---CCA
TCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCGATCTCTCGCC
CCCCTCCCTCCCTCCC-TCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCTTTTCTTCCCC
CCCTCCCCCTCCCTCTCCCTC-----------TCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTAGCATGCTGATTATA
TACACCGTGTTTTTGTTTATCCCCGT------------------------------------------------------
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>chr7D_1016
GGCTA---------------------------------------------------------------------------
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-------------------CGGCTACGGCGGTGGCTACGGCGCCGGCTATGACATGGCCGGGTACGGCAACGGAGCCGGA
GGAGCCTACTACACCAACGACCGGTACCCCGCGGCGGC------GCCGCCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGACTTCCCGGCTCCGCTCACCGGGCTCGAGTTCCAGCCGTCAGATACCTGCCCCAAGAACTACGTCATCTTTG
ATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGGCTACGACCAG
CA---CTGCAACAACGGCGGCTACGACCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGGACGGAGGCGA
GTGTTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGACGGCGACGAGGAGGACGACG
TGCTGAGCACGGGTCGCACGCCTGCCTGCCGCGGAGGGGGCTCGCCCGACTCCACCTGCTCCTCCGGGTACGTGGTGAGC
GTCAGCCCGACTGGCAACGCCGCGGGCGCCGGCGGGGGCGGGGAGAGGAAGAAGGAGCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCCGCCGTCCTGGACGAGGCCGTCAGGTACCTCAAGTCGC
TCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGACAGCGACCTCACATGGCAATGCAGGT
CGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCGCTGCCATGATGATACCA
TCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCGATCTCTCGCC
------CCTCCCTCCC-TCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCTTTTCTTCCGC
CCTC------------CCCCGCCCCCTCCCTGTCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTTGCATGCTGATTATA
TACACCGTGTTTTTGTTTATCCCCGT------------------------------------------------------
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>chr7B_1016
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--------GGCTACGGGTACGGCTACGGCGGTGGCTACGGCGGTGGCTATGACATGGCCGGGTACGGCAACGGTGCCGGA
GGAGCCTACTACACCAACGACCGGTATCCCGCGGCGGC------GGCGCCTGCCTATGAGGACCCGCTCGCCGGTCGGAG
GCAGCACGATTTCCCGGCTCCTCTGACCGGGCTCGAGTTCCAGCCGTCGGACACCTGCCCCAAGAACTACGTCATCTTTG
ATCAGACCTATGACCGGAGCAGGGTGATGTACCACCCGTCGCTGGCCAACAACTTCGGCTCCTCCGGGGGCTACGACCAG
CAGCACTGCAACAACGGCGGCTACGACCAGAACTACGTCGGCAAGAGCACCTACTACGGCGGCGACCAGGACGGCGGCGA
GTGTTCAATCCGGCAGAAGGAGGACACCGACGAGATCGACGCGCTGATGAGCTCCGGGGATGGCGACGAGGAGGACGACG
TGCTGAGCACGGGTCGCACGCCTGCGTGCCGCGGAGGGGGCTCGCCGGATTCCACCTGCTCCTCCGGGTACGTGGTGAGC
GTCAGCCCGACTGGCAACGCCGCCGGAGCCGGCGGGGGCGGCGAGAGGAAGAAGGAGCGGATGAAGAAGATGATGAAGAC
GCTCAAGGGGATCATCCCCGGCGGCGACCGGATGGACACGCCGGCCGTCCTGGACGAGGCCGTCAGGTACCTCAAGTCGC
TCAAGGTGGAGGTGAAGAAGCTCGGGGTGCGCGGATCAAGAAGCTAGGGAGGGATAGCGACCTCACATGGCAATGCAGGT
CGAGCCAATGATGGAGGCAGAT-------AAGACGGGGGAGTTGGTGCTCGCTCCTTTTTGCGCTGCCATGATGATGCCA
TCC---CGTGGAGCTCTCGAGGATCAGTGGAAAGGAATGATATGGAAGGATTCAGTTGCCGCACGCGCCGATCTCTCGCC
------CCTCCCTCCCCTCTAGCTGCGTGCGTGCCTGGATTGTTGCTTTGCTTTTGTAGAAGTTGCTGCTTTTCTTCCCC
CCTC------------CCCTC-----------TCGTATCTCTAGGTGCCGGCTGGTGTTGTAACTAGCATGCTGATTATA
TACACCGTGTTTTTGTTTATCCCCGT------------------------------------------------------
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>SNPs
-----------SSSSS-----S------------------S-----------------------------S---S-----
-------S------S-----S-----------------------------------------------------------
---------------------------S----------------------------------------------------
---------------S---------------------------------S----------------SS------------
----------S--------------------------------S------------------------------------
---------------------------------------------S----------------------------------
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-----------------------------------------------------------------S--------------
----------------------------S----SSSSSSSSSSSSSSSSSSSSSS-------------------------
-----S------S-------------------SSS-S-S--S-S------------------------------------
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------------------------------------------------------------------S-------------
-----------------------------------------------SSS----------------S-------------
--S-------------------------------------------------------S---------------------
------------------------------S-------------------------------------------------
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-------------------------------------------------------S----------------S-------
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---------------------------------------S----------------------------------------
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------------------------------------------S-------------------S-S---------------
---------S---S------------------S--S-SS-------------------------S----S-SS-------
-------------SS-----------------------------------------SS----------------------
---------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_290
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------------------------------AGACGTGCCAGACATTGTCA------------------------------
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>reverse_2691
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--------------------------------------------------AATATTGGTGGGCCGCCTAC----------
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