>input_sequence_70524
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGAAGCACATATTCAAGA
TCATCACGGTGCTGGCGGCGATCTCGGCCGTCTGGGCTGCGCTCCTTGAAACCTCGACAGTTCCTCACAGTTACACCTGG
CTGGTGAGTGCCACGAATTCTTTCACT-TGCTGATTTATTGAAGTTAAGACACTGTCTTTCGATTAAGACTCTTGCTTGT
GACTTTTGTTGTTG-------------------------------------------------TAGCTTCCCATCTATTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTTATGGTTGGGTACGGGCTGATGTTCTTTCCCACCTGTCCTCAAGAAGCCA
TACTACTACAACAGGTAGAGGATGTAGTCCTAGTAGCATAATTCTCAG----TTT---------TTTTTGTCTATGCAGT
CTCATTGCCATGTTGAGAACTAATAATCGCTAGAATATACATCCTAGGTATTTTCAGCTTAATAT---ACACTTGTGCAT
TGTATATTATACATTCTTTTCTTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGAA---------
-------------CCATAAGTTTCTTTGTGCCTTATGTGTATGATTGTATGGCTTTTCATAATGGCCACCACAAAGAAAA
CCAAGCCACCTAATTTTTAAACTTTTAAGTTTTCTGTATAATTACAGTTTTGCTTTGTTCCCGTCTGTAATTATTTGTGC
TTGGCCTACTATGCAGGATATTATGGAGGCTAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCTGACTGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr3A_1_TraesCS3A01G099500
AGGGAAACAACCCGGATCACCGGCGAAGATTTTTTGATGATGTAAATTTTACATCATTTGTTGGAGTTGGAGGTTTTTGG
TAATGTAAAATCTACTCCCTCCATTTATAAATATTTGTCTTTTTAGAGATTTCAACAAATGACTACATACGGAGCAAAAT
GAGTGTTCTAAAATATGTCTATATATACATCCGTATGGGGTAGTCCATTTGAAATATCTGAAAAGACAAATATTTTAAAA
CGGAGGGAGTATTTTTTAGTGATGTAAATTTTAGTCAAATTATAATTTTGTGATGTAGTATTTTACATCATCTGTTGAAT
TTGCTCTTAGCAATTTTTCCCACTAAGTACATTACAGTCCGTCGATCCAAGAGGAGAAAATCGGCTCCCGCCATAAAAAA
ACACACCAAGAGTGAGGACGT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CCCTAGGGT
TCCTAGCCGCCGCCGGCCCGCCGCCACTACTGCCGGCCCTCCGCTGCGGCG----------GCCGAAGCCTCCGCTGCCC
CGCCTCCGGTACAGGAGCACAGCAGCGCCTCCCTCCCTGGAGCAGCCGCTCCCGCCCGGCAACGCCGCCGCCCGGAGCTA
C--CGGCGACCAGT--ATAGGCAGGTAGCCACCGCTCCTTCCTCCTTCTTCCCTCAT-----CCTCCCTCCCTCCCTCCC
TCCTTCCTCTTGCATCCTCTATTTGTTC-AATTTTCTCCCTGATTTCTGTATTGGATGAGTACTTGCTGTAGATGGCATA
TTGTGAGAATATAATGATGATTATTTCTTAAGGAGTACTTGCTGCATGGTTTTGGCAGTGCATGCTCAAGTTTACATGTG
AAAGGATTTT---------------------------AGTTGATAGGTGTTTTTGATAATGCTTGTAGGAGCAAATGTTT
ACAGATTGTAGTTTGATTTTTTTTTTCAGATGAGCAAATGTTTTGGTTTAAACATGGTAGCAGCCTATCCGCATCAGTGC
ATTTTAGGCTTTAATTTGCTTTTTTGGTTGATGGCAGACAAACGCTACATT----TCCTAGATGAAGCACATATTCAAGA
TCATCACGGTGCTGGCGGCGATCTCGGCCGTCTGGGCTGCGCTCCTTGAAACCTCGACAGTTCCTCACAGTTACACCTGG
CTGGTGAGTGCCACGAATTCTTTCACT-TGCTGATTTATTGAAGTTAAGACACTGTCTTTCGATTAAGACTCTTGCTTGT
GACTTTTGTTGTTG-------------------------------------------------TAGCTTCCCATCTATTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTTATGGTTGGGTACGGGCTGATGTTCTTTCCCACCTGTCCTCAAGAAGCCA
TACTACTACAACAGGTAGAGGATGTAGTCCTAGTAGCATAATTCTCAG----TTT---------TTTTTGTCTATGCAGT
CTCATTGCCATGTTGAGAACTAATAATCGCTAGAATATACATCCTAGGTATTTTCAGCTTAATAT---ACACTTGTGCAT
TGTATATTATACATTCTTTTCTTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGAA---------
-------------CCATAAGTTTCTTTGTGCCTTATGTGTATGATTGTATGGCTTTTCATAATGGCCACCACAAAGAAAA
CCAAGCCACCTAATTTTTAAACTTTTAAGTTTTCTGTATAATTACAGTTTTGCTTTGTTCCCGTCTGTAATTATTTGTGC
TTGGCCTACTATGCAGGATATTATGGAGGCTAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCTGACTGAGGTC
GATTCCAATGTTTAATATTTTGTGGCCAGTTTGAAGCTTCCTGGATACCATAGCTAGAAAAGGTTATATGACATTTCACT
ATGTTTAGATAC-TGTTACTAACACAGTTTTGGTGAGTGGCGTGTTACAATTCTACATTTGAG-------GTGGATGGCT
TGTCACAACACTACTTGTGTCCG-AAAACATTATGAGAACAA--------CTAATGAATGGTTCGTTAACAAGTCCATTA
GTGTTCATGACATG-TTTGCGTTGTAA-CCATCTGGATTTCATCACTGGGTGTATATCAGTTTGTGCTCTGCAGTATCGC
CTTTGGTGATGCTTTGAATTGCTAGTTCTTTTGATGGTTTAGTTCTAGT--GTGTAAGTTTCTGCCCAGTGCAGATTTCT
TTCATTTGGCAACTCTGGAAC------------TTCTCAAATTCAGCAAAGTTCCGTCTCATTGGCACTTTGAGGTTTGA
ACTCCTCATGATTTAACAAAAGATCATTAAACCTTTACCGATACCATTATTGCTCCATGTTTACAAAACAGTTGTAGAAT
GGA------------CTGTGCAGTGAACCTGTTTCAACTCGTAATGCTATTATTATATAT--ACATGTTCAGTCACATGC
CAATTTGAGAGCATACAGTCGCCTGCTACCTTGAGCTAGCAGCTTCCGGCA-GGGACTTGTTTGAGTCTGGTCCATCATC
TTCTCCGGCACTGGGAACT-------------------------------------------------------------
------------------CCTGGAGCCCCT----------------------------------------------TGGG
CCATTATATATGTGC--------ATATATGTTATGTGTTCCGTATACCTGGCCCTTGGCGTCTGTTGCTTAAACATGTAT
GCTG--CTCTGTTCTGTTCCTGGCTTGGCATGTCAAAAGTTTTTAAAAA-TTATAGTAGAGTTTGTGGTGTTGTTGAATT
TTTGGGTCCTGTTGGCGCCTTCTATGTGAGGTTGAGGTTTACCTAATGCTAGTCATTCTCTGCAATTCTCCAAAAAAAAC
ACTG---TTTTTTTTTTCTTTCAGAAGTACCCGTTGCTGACATTTTGTGGACAGGTTTGAGAG
>chr3D_324
CTCTTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CAATTTTTCCCACTAAGTACATTACAGTCCGCCGATCCAAC-----------------------------
------------TGAGGACGTCTCTAGGGTTCGGCAAATTTGACAAATTTGACCTATGAACAAAATCAAACCACAGAATA
AACTGTCCGTGAAACTATTTCACGTGGCTGAATTTTTTGTGTGACGCCCGACATGAAGGCGCCACACTACACTGTGCAAC
GCCTCATAGATAGGCGCTACACGCCTGGCCAGCGTTGCACCCCAGACTGCCTAAAAATTGTTAAGTCATTGTGCAGAGCC
TAAGAGCTAGGCGCTGCACTGTATAGTGTGGCGCCTAGCTCTCAGGCGCTGCACTAGTGGTTGCACTACAAAATAAAGCA
ATCACTAGTGCAACGCCTAGAAGCTAGGCGCTGCACACTGACTTAGTAATTTTCGGATCACACGGATGCGACGCTGGCCA
GGCGTGTAGCGCCTATATGTGAGGCGTTGCACAGTGTAGTGTGGCGCCTTCGTGTCAGGCGTCACACAAAAAGGCCAGCC
GCGTGAAATAGTTTCACAGACATTTCATTCTGTGATTTGATTTTGTCCATAGGTCAAATTTGTCAATTTTGCCCTAGGGT
TCCTAGCCGCCGCCGGCCCTCCGCTGCGGCCTGCCCAGC----------CG----------GCCGAAGCCTCCGCTGCCC
CGCCTCCGGTACAGGAGCACAGCAGCGCCTCCCTCCCTGGAGCAGCCGCTCCCGCCCGGCAAC-----------------
-GCCGGCGACCAGTCCATAGGAAGGTAGCCACCTCTCCTTCCTCCTCCTTCCCTCATCCCC-CCTCCCTCCCTCCCTCCC
TCCTTCCTCTTGCATCCTCTATTTGTTCAATTTTTCTCCCTGATTTCTGTGTTGGATGAGTACTTGCTGTAGATTGCATA
TTGTGAGAATATAATGATGACTATTTCTTGATGAGTACTTGCTGCATGGTTTTGACAGTGCATGTTCAAGTTTACATGTT
AAAGGATTTT---------------------------AGTTGATAGGTGTTTTTGATAATGCTTGCTGGAGCAAATGTTT
ACAAATTCTAGTTTGATTTTTTCG-CTC-------------------------------------------------TGC
ATTTTAGGCTCTAATTCGCCCTTTTGATTGATGGCAGACGAACGCTGCATT----TCCTAGATGAAGCACATATTCAAGA
TCATCGCAGTGCTGTCGGCGATCTCGGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTTCCTCGCAGTTATACTTGG
CTGGTGAGTGCCATCAATT-TTTCACT-TGCTAATTTATTGCAGTTAAGACACTGTCTTTCGATTAAGATGGTTGCTTGT
GACTTCTGTTCTTG-------------------------------------------------TAGCTTCCCATCTACTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTCATGGTTGGGTATGGGCTGATGTTCTTTCCCACTTGTCCTCGAGAAGCCA
TACTACTACAGCAGGTAGTGGATGTAGTCCTAGTAACCTAATTCTCTCTCTCTCTCTCTCTCTCTTTTTGTCTATGCAGT
CTCATTGCCATGCTGAGAACTAATAATCGCTAGAATTTACATCCTAGGTATTCTCAGCTTAATAT---ACACTTGTGCAT
TGTATATTTTACACTCTTTTATTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGGA---------
-------------TCATAAGTTTCTTTGTCCCTTATGTGTATGATTGTATGGCTTTTCATAATGGCCACTACAAATAAAA
CCAAGCCACCTGATTTTGAAACTTTAAA-TTTTCTGTATAATTACATCTTTGCTTTGTTCCCATTTCTAATTATTTGTGC
TCGACCTACTATGCAGGATATTGTGGAGGCAAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCTGACTGAGGTC
GATTCCAATGTTTAATATTTTGTGGCCAGTTTGAAGCTTCCTGGATACCATAGCTAGAAAAGGTTATATGACATTTCACT
ATGCTTAGATAC-TGTTACTAACACAGTTTTTGTGAGTCGCGTGTTACAATTCTACATTTGAG-------GTGGATGGCT
TGTCACGATACTACTTGTGTCAG-AAAACATTGTGAGAACAA--------CTAA-GAATGGTTCATTAACAAGTCCGCCG
GTGTTCATGACATGCTTTGCTTTGTAA-CCATCTGGGTTTCATCACTGGATGTGTATCAGTTTGTGCTCTGCAGTATCGC
CTTTGGTGATGCTTCAAATTGCTAGTTCTTTTGATGGTTTAGTTCTAGT--GTGTAAGTTTCTGCCCAGTGCAGGTTCCT
TTCATTTGGCAACTCTGGAAC------------TTCTCAAATTCAGCAAAGTTCCATCTCATTGGCACTTTGAAGTTTGA
CCTCCTCATGATTTAACAAAAGATCATTAAACCTTTACCGATACCATTATTGCTCCATGTTTAAAAAACAATTGTAGAAT
GGA------------CTGTGCAGTGAACCTGTTTCAACTCATAATGCTATTAT-----AT--ACATGTTCAGTCACATGC
CAATTTGACAGCAGACAGTCGCCTGCTACCTTGAGCTAGCTGCTTCCGGCA-GGGACTTGTTTGAGGCTGGTCCATCATC
TTCTCTGGCATTGGGAACTCGCTCTGCCGTGCGGTTCTCTGTCGCTGCCTCCTCGTCTGTTGCACCTGTGACCTGCATGA
AGTCCTCGACAGCCCCTCCCTGGAGCCCCT----------------------------------------------TGGG
CCATTATAT--GTGC--------ATATATGTTGTGTGTTTCGTATACCAGGCCCTTGGCGTCTGTTGCTTAAACATGTAT
GCTG--CT--GTTCTGTTCCTGGTTTGGCATGTCAAAAGTTTAAAAAAAATTATAGTGGAGTTTGTGGTGCTGTTGGATT
TTTGGGTCCTATTGGCGCCTTCTATGTGAGGTTGAGGTTTACCTAATGCTAGTGATTCTCCAA--------AAAAAAAGC
ACTTTGTTTTTTTTTTTCTTTCAGAAGTACCAGTTGCTGACATTTTGTGGACAGTTTTGAGAG
>chr3B_406
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CCAAGAGTAAGGACGT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------CCCTAGGGT
TCCTAGCCGCCGCCGGCCCGCCGCCACTACTGCCGGCCCTCCGCTGCGGCCTGCCCAGCCAGCCGAAGCCTCCGCTGCCC
CGCCTCCGGTACAGGAGCACAGCAGCGCCTCCTCCCCTGGAGCAGCCGCTCCCGCCCGGCAACTCCGCCGCCCGGAGCTA
CGCCGGCGACCAGTCCATAGGCAGGTAGCCACCTCTCCTTCCTCCTTCTTCCCTCATCCCCACCTCCCTCCCTCCCTCCG
TCCTTCCTCTTGCATCCTCTACTTGTTCAAATGTTCTCCCTGATTTCTGTATTGGATGAGTACTGGCTTTAGATTGCATA
TTGTGAGAATATAATGATGACTATTTCTTCATGAGTACTTGCTGCATGGTTTTGACAGAGCATGTTCAAGTTTACATGTG
AAAGGATTTTAGTTGATAGGTTTTTTGTTTGAGGTAAAGTTGATAGGTGTTTTTGATAATGCTTGCTGGAGCAAATCTTT
ACAAATTCTAGTTTGATTTTTTTCTCTC-------------------------------------------------TGC
ATTTTAGGCTCTAATTCGCCCTTTTGATTGATGGCAGACAAACGCTGCATT----TCCTAGATGAAGCACATATTCAAGA
TCATCGCGGTGCTGGCGGCGATCTCGGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTTCCTCGCAGTTATACTTGG
CTGGCGAGTGCCATTAATT-TTTCACT-TGCAAATTTATTGCAGTTAAGACACTGTCTTTCGATTAAGATGGTTGCTTGT
GACTTCTGTTGTTG-------------------------------------------------TAGCTTCCCATCTACTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTCATGGTTGGGTATGGGCTGATGTTCTTTCCCACTTGTCCTCGAGAAGCCA
TACTACTACAGCAGGTAGTGGATGTAGTCCTAGCAGCCTAATTATCTCTCTCTTT---------TTTTTGTCTATGCAGT
CTCATTGCCATGTTGAGAATTAATAATCGCTAGAATATACATCCTAGGTATTTTCAGCTTAATAT---ACACTTGTGCAT
TATATATTATACATTCTTTTCTTTTGGTTTTCTGCTGGCATAATGAGATTCAAGGTATTATGCAGAAGGCA---------
-------------CCATAAGTTTGTTTGTCCCTTATGTGTATGATTATATGGCTTTTCATAATGGCCACTACAAATAAAA
CCAAGCCACCTGATTTTGAAACTTTAAA-TTTTCTGTATAATTACATCTTTGCTTTGCTCCCATTTCTAATTATTTGTGC
TCGACCTACTATGCAGGATATTGTGGAGGCAAAGGAATTCTTATCCAAAAGGGGTGTTGATGTGGGCTCCGACTGAGGTC
AATTCCAGTGTTTAATTTTTTATGACCAGTTTGAAGCTTCCTGGGTACCATAGCTAGAAAAAGG-TTATGCCATTTCACT
ATGTTTATATA-TTGTTACTAACACAGTTTTGGTGAGTGGCGTGTTACA---CTACATTTGAG-------GTGGATGGCT
TGTCACGATACTACTTGTGTCAG-AAAACATTGCGAGAACAA--------CTAATGAATGGTTCATTAACAAGGCCATCA
GTGTTCATGATATG-TTTGCTCTGTAA-CCATCCAGATTTCATCACTGAATGCGTATCAGTTTGTGCTCTGCAGTATCAC
CTTTGGTGATGCTTTGAATTGCTAGCTCTTTTGATGGTTCAGTTCTAGTATGTCTAAGTTTCTGTGCAGTGCAGATTTCT
TTCATTTGGCAACTCTGGAAC------------TTCTCAAATTCAGCAAAGTGTTGTCTCATTGGCACTTTGAAGTTTGA
ACTCCTCATGATT-AACAAAAGATCATTGTACCTTCGCTGATACCATTATTGCTCCATGTTCACAAAACAATTGTAGAAT
GGA------------CTGTGCAGTGAACCTGTTTCAACTCATAATGCTATTAT-----ATACACATGTTCAGTCACATGC
CAATTTGACAGCAGCCGGTCGCCTGCTACCTCGAGCTAGCTGCTTCCGGCAAGGGGCTTGTTTGAGGCTGGTCCATCATC
TTCTCCGGCACTGGGAACTCGCTCTGCTGTGCGGTTCTCTGTCGCTGCCTCCTCGTCTGTTGAA----------------
--------------CCTCCCTGGAGCCCCTGCTCGCAGTAGTTCTCAGTGGTCAGTTGTAAAGCTTACACGCGCCTTGGG
CCGTTGCAT--GTGCATATATCAATATATGTTGTGTGTTTCGTATACCTGGCCCTTGGCGTCTGTTGCTTAAACATGCAT
GCTCCTCT--GTTCTGTTCCTGGTTTGGCATGTCAAAAGTTTTAAAAAA-TTATAGTGGAGTT-----TGTTGTTGAATT
TTTGGGTCCTATTGGCGCCTTCTATGTGAGGTTGAGGTTTACCTAATGCTAGTGATTCTCCAA--------AAAAAAAAC
ACTG---TTTTTTTTTTCTTTCAGAAGTACCCGTTGCTGACATTTTGTGGACAGTTTTGAGAG
>chr5A_957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ATTCGCTCTTTTGATTAATGGCAGACGAGCGCTATATT----TT-TAGATGAAGCACATATTCAAGA
TCATCGCGGTGCTGGCGGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGG
TTGGTGAGTGACATTAAAAA-TTTTCACTCCTAATGTCATGAAGACAT---GCTCCTTTTA-ATTATGATGTTTGCTTGT
GGCTTTTGTTGTTG-------------------------------------------------TAGCTTCCCATCTACTT
GGTAGTGGCGCTTGGATGCTATGGCCTTTTTATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGTGG
TATTACTACAGCAGGTAGCTGACGTAGTCCTAGCAGCCTAATTTTC-----------------CTTTTTGTCT--GCAGT
CTTATTTCCATTTTGAAAGCTAGTAGTCTCTAGAACTTGCATCCTTTGTTATTTCCTGTTTTAGTTCCACACCTGTGCAT
TGTCTATTAT-----CTTTTCTCTTGGTTTTCTGCTGGCATAACGAGATTCAAGGTATTATGCAGAAAGGAAACAAGGCA
AACTCTGAAAACTTCATAAGTTTATTTGTACCTTATGTGTATCATTGTATGAATTTTCATAATGGTCACTACAAAGAAAA
CCAAGCCACCTGATCTTGAAACTTTGAA-GTTTTCTGTACATCACATGTTT--TTTCTTCCCATTTATAATTCTTTGAGC
TCGACCAACTATGCAGGATATCATGGAGGCAAAGGATTTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTC
AATACCAATGATTTATGTTTCGTGACCAGTTTGAAGCTTCCTGGATACTGGATAG---AAAAAA-TTATGACATTTCACT
GTGTCTAGATATTTGTTACTAATGCAGTCTTTGTGAGTGGCGTGTTACAGTTCTACATTTTGTTAGTTCAGTGGATGGTT
TGTCAGGATATTAGTTATGTCAGGAAAACAGTGTGAGAATAGCTAAATAGCTAATTAATGGTTTGTTAACAAGTCCATCA
ATGTTCA-GACATG-TTTGCTATTTAA-CAATCTGGTTTTCATCACTGGATGTGTATCAATTTTTTCTGTGCAGTATCAT
CTTTGGTGATGCTTCGAATTGCGAGCTACTTTGATGGTTCAGTCCCAGCATGCGGAATTTGCTGTCCAGTTCAGATATCC
TTCATTTGCTAAATCTGGAATGACTTCTTGAGTTTTTCAAATTTGACAAAGTTCTCAACTCATGA---------------
------------TTAGCAAAAGATCACAAAACCTTTACCAATACCATTATTGCTCCATGTTTACATAACAATTGTAGAAT
GAACCAGTATACACCCTGTGCAGTGAACCTGTGAAAACTCATAATCCTATTTT-----AT--ACATGTTCAGTCACATGC
CAAGTTGGCAGCAGACGGTCACCTGCTACCTTGAGGTAGCTGCTTCCGACG-GGGACTTGTTTGAGTCTGGTCCATCATC
TTCTCCAGCACCAGGAACTC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr5D_957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------ATTTGCTCTTTTGATTGATGGCAGACAAGCGCTGCGTTC----CCTAGATGAAGCACATATTCAAGA
TCATCGCGGTGCTGGCAGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGG
TTGGTGAGTGTCATCAATT-TTTGTCACTTCTAATGTCTTGAAGAAGAGAGGCTCCTTTTA-ATTAAGATGTTTGCATCT
GGCTTTTGTTGTTATAGCTTCCCGCCTTTTAATTAAGATGATTGCATCTGGCTTTTGTTGTTATAGCTTCCCATCTACTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTCATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGCGG
TGTTACTACAGCAGGTAGCTGACATAGTCCTAGCAGCCTAATTTTC-----------------CGTTTTGTCTACGCAGT
CTTATTTCCATTTTGAAAACCAATAGTCTCTAGAACTTGCATCCTTTGTTATTTCCCGTTTTAGTTTCACACCTGTGCAC
TGTCTATTATATATCCTTTTCTCTTGTTTTTCTGCTGGCATAACGAGATTCAAGGTATTCTGCACAAAGAAAAGAACAGA
AACTCTGAAAACTTCATAAGTTTATTTGTACCTTATGCGTATCATTGTATGAATTTTCATAATGGTCACTGCAAATAAA-
CCAAGCCACCTGATTTCCGAACTTTTAA-GTTTTCTGTAGATCACATGTTTGGTTTCTTCCCATTTGTAATTCTTTGAGC
TCGACCAACTATGCAGGATATTGTGGAGGCAAAGGAATTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTC
AATACCAATGATCTATGTTTCATGACCAGTTTGAAGCTTCCTGGATACCATATAG----AAAAA-ATATGGCATTTCACC
ATGTCTAGATATTTGTTACTAACGCAGTTTTTGTGAGTGGCATGTTACAATTCTAGATTTTGTTAGTTCAGTGGATGGCT
TGTCACGATACTAGTTATGTCAGGAAAACAGTGTGAGAACAA--------CTAATTAATGGTTTGTTAGCAAGTCCATCA
GTGTTCAAGACATG-TCTGCTATTTTAGCAATCTGGTTTTCATCACTGGATGTGTATCCATTTTTTCTGCGCGGTATCAT
CTTTGGTGAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>chr5B_962
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CTCTTTTGATTGGTGGCAGACGAGCGCTAGCTGTGTGTCCTAGATGAAGCACATATTTAAGA
TCATCGCGGTGCTGGCAGCAATCTCCGCCGTCTGGGTTGCGCTCCTTGAAACCTCGACAGTCCCTCGCAGTTTTACTTGG
TTGGTGAGTGTCATCAATT-GTTTTCACTTCTAATGTCTTGAAGAAGAGAGGCTCCTTTTA-ATTAAGATGTTCGCTTCT
GGCTTTTGTTGTTA-------------------------------------------------TAGCTTCCTATCTACTT
GGTAGTGGCGCTTGGATGCTACGGCCTTTTCATGGTTGGATATGGGCTCATGTTCTTCCCAACCTGCCCTCAAGAAGCGG
TGTTACTACAGCAGGTAGCTGACATAGTCCTAGCAGCCTAATTTTC-----------------CTTTTTGCCTACGCAGT
CTTATTTCCATTTTGAAAACCAATAGTCTCTAGAACTTGCATCCTTTGTTATTTCCCGTTTTAGTTTCACACCTGTGCAC
TGTCTATTATATATCCTTTTCTCTTGTTTTTCTGCGGGCATAACGAGATTCAAGGTATTCTGCACAAAGAAAAGAACAGA
AACTCTGAAAACTTCATAAGTTTATTTGTACCTTATGCGTATTATGGTATGGATTTTCATAATGGTCACTACAAATAAA-
CCAAGCCACCTGATTTCCGAACTTTTAT-GTTTTCTGTACATTACATGTTTGGTTTCTTCCCATTTGTAATTCTTTGAGC
TCGACCAACTATGCAGGATATTGTGGAGGCAAAGGAATTCCTATCAAAAAGAGGTGTTGATGTGAGCTCTGATTGAGGTC
AATACCAATGATTTATGTTTCATGACCAGTTTGAAGCTTCCTGGATACCGTACAG---AAAAAA-TTATGGCATTTCACC
ATGTCTAGATATTTGTTACTAACGCAGTTTTTGTGAGTGGCATGTTACAATTCTAGATTTTGTTAGTTCAGTGGATGGCC
TGTCACGATACTAGTTATGTCAGGAAAACAGTGCGAGAACAA--------CTAATTAATGGTTTGTTAGCAAGTCCATCA
GTGTTCAAGACATG-TCTGCTATTTTA-CAATCTGGTTTTCATCACTGGACGTGTAT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS-------------------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------S-----
--------------------S--------S-S----------------------S---------S---------------
-----------------------------------------------------------------SS-------------
---S---S---------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
----------S---------S-----S-----------------------------------------------------
-----S------------------------------S-----------------------------S------S--S---
-------------SS----S------------S------------------------------------SSS--------
-----------------------------------------------------------------------------S--
------------------------------------------S-------------------------------------
----------S-------S------------------S--------SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S---------------------------------------S----------
-----------S-----S----------S-----------------SS--------------S-S---------------
-S-S--------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-S------------S----------S---------------------------------------------S-
--------------------S----------------------------S---S--------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
----------------------------------------------------------------------S---------
----------------------------------------S------------SSSSS----------------------
--------S----S--------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SS---------------------S------S----------------------------------------
--------SS-------------S-------------------S-------------S----------------------
----------S------------------------------------------S------SSSSSSSSSSS---------
------------------------------------------------------S--------
>forward_374
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CAGTCCGTCGATCCAAGAGG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_1838
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTT
GGTAGTGGCGCTTGGAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_1516
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GTAGCAGCCTATCCGCATCA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_3370
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TGTTCTGTTCCTGGCTTGGC---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
