>input_sequence_70497
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----------------------------------------------------------------ATGGAAAGCTCCGAGT
TATCAAAAAAAAAGATGGAAAGCTCCGATTTGTCTCTCTCTCAAAAAAAAAAAGAGATGGAAGCTCCGATACGAACCAAT
CTCGAAATCGAAAACGGAAACAAGTATGGCAGTCCTACTCCGGCCAGGACACGGTCACCCATGGCGACGATTAATACCAA
CACATGGCCGCGCGCACATTCAGATGTCAGCCGATCGATCTCGGGAGCAAGTGCAAGCTTGATGGCGTGGCTTGCCATGG
ACGTCGGCGAGGACTACCTGCATCTGCCGCAAGACCACGAC------GAGGACTACCTGCATCTGCCGCACGACCACGAC
TACGACG---------------------------------------AGTACACGAGGGAAGCGCTCTCCGCCGCCGAAGC
GCTGCTGTTCCTGCACCCGCGGCCGCCGGGCGCCGCGGAATACGCGGCCGGCATCATCCCACGCGTCGGCGTCGCGGCTG
CTCCACGCGACTCGGAGTTGGCGGCGGCGGTGGCAAAAGCGCTGACGACAGTGGACGGGCCGTCCGACGACCGCGGCTGC
CCGATCTGCATGGACGACGACGAAGT---------GGCGTGGAAGGAGACGAAGCCGTGCGGGCACCGGTTCCACGGACG
GTGCGTGGAGCCGTGGCTCAAGGCCAAGGGGAGCTGCCCCATGTGCCGGCGCCAGGTGGTGGCGAGGCCGACGCAGAGCA
GTTCATGGACGATTCTCTCCAGCGGTAGACGCTTGCCCTCGTCGTGA---------------------------------
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>chr7D_1_TraesCS7D01G082700
CCCGTGCGTTGCAACGGGAATATGACATTCTAGTAGATTATCTCGTGACTGCGTGTCTATTATTATATTGATGCGCTAAA
ATCTTAGCAAGTTTTTGTATGCAATCGCCATGATTTACCTGCCATTTTATTGTTAAGCACTCACTTGGTAAGAATTTAAT
TACTTGTCAAACAAAATGTGTTTTTGGTAAGTTAATAAAATATGAGACAATTAATTCTATTTTAGGGAGAATGTATGGGA
GAAAAATCAGAGATGAGAGAAAATAATCAAAAAGGATAAGTAAAGAGCGAGACATATATAAGGAAGGTTAGACGAAAGAG
AGGTGAAATCGGAACCTTACGTTCTTTTTAATTAGTATACATATTTTGCTGTAATTTTCTTCAGGACGCGTTATATCTAT
TTGTCTCGATGTGTCGATCGATTTTCTTCCAATAAATAGTTTTTTCTGTTTTAATTTTATGTTTTATTTCCTTTTCTTCG
GGTTTTAGAACAAGTTTTTGTTATTTTTTGTAACAACAATTCTTTGTTTTTTATGTTTTTATTTTATGATTCATAAATTG
TTTTAATAAATACTCATGTGCATTTTAAAAATTCGTGATTTTATTAAAATTATTGAAATTTTCTAATTATTCACTTTCTT
TAAATTTCTGAATATTTTTAAATTTCGTGAGTACTTTTAAATTCTTAAATAAA---------TTGTAATCTTTTAATGTT
TGAAACACTAATTTTCCTAAATTTGTAAACAAAAAAGGTAGCTGGTTTTTCTCACCGCCCGATGCTTCTCTTTTTTCAGT
CAGGAACGAGCAAGCACACTGTTTCTTTTCCCTTTTGTGAGGGCCTGAGGGGAGCAGCAAGGGAGTGCCAGTCTACCAGC
CCGATTGCCCATCTATCCATCGCAGAGAGTGATGAATAAGAGTTTCATACTAAGTTGTACGA--------------GGGC
GCACGAATCAC-GCGCAATAGAGAAAGCCCAACGGGCCGATCAGTCTGCCAACCGTCGGCTTAGATGGAAAGCTCCGAGT
TATCAAAAAAAAAGATGGAAAGCTCCGATTTGTCTCTCTCTCAAAAAAAAAAAGAGATGGAAGCTCCGATACGAACCAAT
CTCGAAATCGAAAACGGAAACAAGTATGGCAGTCCTACTCCGGCCAGGACACGGTCACCCATGGCGACGATTAATACCAA
CACATGGCCGCGCGCACATTCAGATGTCAGCCGATCGATCTCGGGAGCAAGTGCAAGCTTGATGGCGTGGCTTGCCATGG
ACGTCGGCGAGGACTACCTGCATCTGCCGCAAGACCACGAC------GAGGACTACCTGCATCTGCCGCACGACCACGAC
TACGACG---------------------------------------AGTACACGAGGGAAGCGCTCTCCGCCGCCGAAGC
GCTGCTGTTCCTGCACCCGCGGCCGCCGGGCGCCGCGGAATACGCGGCCGGCATCATCCCACGCGTCGGCGTCGCGGCTG
CTCCACGCGACTCGGAGTTGGCGGCGGCGGTGGCAAAAGCGCTGACGACAGTGGACGGGCCGTCCGACGACCGCGGCTGC
CCGATCTGCATGGACGACGACGAAGT---------GGCGTGGAAGGAGACGAAGCCGTGCGGGCACCGGTTCCACGGACG
GTGCGTGGAGCCGTGGCTCAAGGCCAAGGGGAGCTGCCCCATGTGCCGGCGCCAGGTGGTGGCGAGGCCGACGCAGAGCA
GTTCATGGACGATTCTCTCCAGCGGTAGACGCTTGCCCTCGTCGTGATGTTCTGCTCGGCAATGATGTACTCCACTCCAG
TATTGCTATGAAATTGAGCCGGGGCCCGAGAAGACATTGCATCATCCAAAATATTGCGTGCATCACAAAACGCCGGTATC
AAATACCAAGAAGGGGGCAGCTTCTGTACATGCCTTGGTGATCAAGGAGATCAAGTATAGGAGTGGTGAATTCTATGATG
TAAAATTCTGTTATGAATCAAGTCCAACTTTGAAACACATTCTT--TAGTTAAGGCCACTGTTGCTTTACCAGTTGGTGG
CCGCCTGTGGCA--AGGGTCCCGACTAGATATTATTTGTACTAGAGGGTATGGCGCACTCTGCTGCGCCCGGCTATAGCC
ACGCCCGCCACATGTGAGTTATGTGTCGTTGTCTTGGTGA-------TGATAAGTTTCGAGGCACTTATCCGATCTTCTT
ATTTTAGATTTAGACTTCTTTTGGTTTACATAATTTTTGTAGGATAAAATTCCTATAAGAATTTTTGTTTTATGTTTAGG
CCTCCTTTGGTTTACATAAATTTTGTAGGAATTCTACAGGATAAAATTCCTATAGGAAAAAAAAGAGAATGGATTCCTAT
TCCTATATGGGAAGCGCTACGCGCGGCCAGCGAATCTTTTTAAAAGATCCACCGCCTCACGAGCCGTTGGATTTAACAAG
GGATGACTATTAGCTGTCAGCTTTGCAACAAGCATGATGTTCCGTTCGAACATTTGTAGCAGAGTTCATGTTGCAGAACG
TTTGCAACAGAGGTGTTGTTGTAGGATTAGTTTTGCAACTGAGCTAATGTTGCAGAATTTTTTTTGTATTTGCCTTTACA
TGGCGCTCCAAAAGCAGGCTTTGCAACATCACTGATATTGTAGAAACCCTGTTGTTCTTGCAACAGGGAGGATGTTGCAA
GAAAAAATCCTACCATGGTTCATCGTGATCTTCCATCGGCCGGTTGTGAGGGAGGGGGGACACCACCCGTCCCTACTATC
GGGCCACCGCCGGAGAAC
>chr7A_465
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----------------------------------------------------------------TAATTCCTTTTCTTCA
GTTTTTATAACAAGTTTTT---ACTTTTTATAAAAAATATA-TTTGCAATTTCTGTTTTCTTTCTTAAATTCATATTTTT
TTGAA--AAATATTCGGGTGAATTTTGAAAATTCGTGATTTTT----AAATATTGATATTTTAAATTTTGTTCAAAAATA
ATTTTG--TGAATAGTTTTAAATTTGGTGAGTATTTTAAAATTCTTGATTATTTTTTAAAGTTTGTAACCTTGTAATGTT
TGAAACACTAATTTTCCTAAATTTGCA---AAAATAGGTAGCTGGTATTTCGCACAATAGTAGTTTTGAAATT-------
--------------CATACTATTTTTTTTAGAATCAGTTCCATCCTTTTTTTCAACGGGAGAATC---------------
----------------------------------------AGTTCCATACTATTGTACTAGGAGTGACTGCGTGCTGGGC
ACACGAATGTCTGCCCAATAGAGAAAGCCCAACAGGCCGATCAGTCCGTACCCCGTCGGCGTAGATGG------------
-------------------AAGCTCCGATTTGTCTCTCTCTCAAAAAACAAGAAAACCGTCGGCGATACAA--AACCAAT
CTCGAAATCGGAAACGGAAACAAGTATGGCAGTCCTCCTCCGGCCAGGACACGGTCTCCCATGGCGACGATTAATACCAA
CACATGGCCGCGCGCACATTCAGATATGAGCCGATCGATCTCGGGAGCAACTGCAAGCTTGATGGCGTGGCTTGCCATGG
ACGTCGGCGAGGACTACCTGCATCTGCCGCAAGACCACGACCACGGCGAGGACTTCCTGCATCTGCCGCATGACGACGAC
CACGGCGAG-----------------------------------------------------------------------
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>chr4A_1029
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--------------------------------------------------------------AGATGG------------
-------------------AACCTCCGATTTGTCTCTCACTGAAAAAAAAAATC-----GAAGCTCCGATACGAACCAAT
CTCGAAA------ACGGAAACAACTATGGCAGTCCTCCTCCGGCCAGGACACGGTCTCCCATGGCAACGATTAATAGCAA
CACACGGCCGCGCTCACATTCAGATATCAGCCGATCGATCTCGGGAGCAAGTGCAAGCTTGATGGCGTGGCTTGCCATGG
ACGTCGGCGAGGACTACCTGCATCTGCCGCAAGACCACGACCACGGCGAGGACTTCCTGCATCTGCCGCATGACGACGAC
CACGGCGAGGACTACCTGCATCTGCCGCATGACCACGACCACGACGAGTACACGAGGGAAGCGCTGTCCACCGTCCAAGG
GCTGCTGCTCCTGCATCCACGGCCGCCCGGCGCCGCGGCATACGCGGCCGGCATCATCCCACGCGTCGGCGTAGCGGCTG
CTCCACGCGACTCGGAGTTGGCGGCGGCGGTGGCAAAAGCGCTCACGACGGTGGACGCGCCGTCCGACGGCCGCGGCTGC
CCGATCTGCTTGGACGACGACCAGGTGTCGGGAGGGGCGTGGAAGGAGACGAAGCCGTGCGGGCACCGGTTCCATGGACG
GTGCGTGCAACCGTGGCTGCAGGCCAAGGGGAGCTGCCCCATGTGCCGGCGCCAGGTGGTGGCGAGGCCGACGCAGAGCA
GTTCATGGGCGATTCTCTCCAGCGGTGGACGCTTGCTCTCGTCGTGATGTTCTGCTCGGCGATGATGTACTCCA-TCCAA
TATTGCAATGAAATTGGGCCGGGGCCCGAGAAGACATTGCATCATCCAAAATATTGCGTGCATCACAAAACGC-------
-------AAGATGGGGGCAGCTTCTGTACTTGCCTCGGTGAAAAAGGAGATCAAGTATAGGAGTGGTGAATTCTCTGATG
TACAATTCTGTTATGAATCAAGTGCAACTTTGAAACACATTCTTTATAGTTAAGGCCGCTGTTTCTTTACCAGTTGGTGG
CCGCCTATGGCTACAGGGTCCCGACTA-------------CTAGAGGGTACGGCGCGCTCTGCTGCGCCCTGCTATAGCC
ACGCCCGACACATGTGAGTTACGTGTCGTTGTGTTAGTGATGATAATTGATAAATTTTGGAGCACATATCCGGTCTTCTT
ATTTTAGATTTAGACTTCCTTTGGTTTACATAAT-TTTGTAGGATCAAATGCCTATAAGAATTCTTTTTTTAGGTTTAGG
CCTCCTTTGATTTACAAAAGTTTTGTAGGAATTTTATAGGATAAATGTCTATAAAAAAA---------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S------------S
-S-----S-----------SSS-S-----S---S--SS--SS----SSS---S------SS--S-SSS-------SS--S
--SS-SS-----S--SS---S-----S---------------SSSSS--S------S-----SS-S--SS-SSSSSSS-S
SSSS-SSS------S----------S-------S---S--------S-S--SS---------------S---S-------
-------------------------S-SSS----S-----------S----S---SSSSSS-SSS--SSSS--SSSSSSS
SSSSSSSSSSSSSS--S---S---S----SSSS-SS--SSSSS---SSSSSSSSSS-SS--SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------SSS-SSSS-S------------------
S-------SS----S------------------S------------S-SSSS--------S-------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----------------------------------S-SSS----------------------
----------S-------------------------S-------------------S-----------------------
-------------------------S------------------------------------------------------
------------------------------------------------------S---------------S---S-----
S---S------------------------------------------------------------S---S---S-S---S
-------S-------S--S--------S----------S---------------------------------S-------
-------------------------------------------S-----S-------S-----------S----------
---------S-----------S-S--------------------------------------------------S-----
-------S-S--------SS------------------------------------------------------------
--------S-----------------S---------S-----------------------S-------------S----S
------S---------S--------------------------------------------------------SSSSSSS
SSSSSSS----S-----------------S-----S-----SS-------------------------------S-----
--S--------------------S---------------------------------S-----S----------------
------S----S---------------SSSSSSSSSSSSS----------S-----S-------------S---------
-------S-------------S----------S--S-----------------S---S-SS----S------S-------
------------------S---------------S----------S----S------------S--S-----S-------
---------S------S--S-------------S--S--------SS--SSSS-SS---SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_896
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----------------------------------------------------------------------------CAGC
CCGATTGCCCATCTAT----------------------------------------------------------------
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>reverse_1922
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-AATACCAAGAAGGGGGCAGC-----------------------------------------------------------
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