>input_sequence_70481
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----------------------------------------GGCGTTGCCGCAGCACGATTTTTAGGGTCGATCGTCAAGC
CGCATGATGTCATCGTCAAGCCGCAGCACGCGCAGGCGGCGGCAGGTCACTAGGGATGCATCCCCGTGGGCGTCGCTGCA
CGGAGAGCTGCTGGAGCTGGATCTGATCGCGTGGCGGGTGCTGGCGGTGGACCTGCG---GGACTACGTCCGGCTCCGCG
CCGTGTGCGCGCACTGGCGCGCCAGCACCACCTGCCCGAGCGGCCGCGGCATCGTCGAAGGTCGCTTCCACCCACGGCAC
TGGACGATGCTGCCCGAGGGCCACGGCCTCCACCCGGGCCACCGCAAGCTGCGCGATTTCGTCCGTTTCTTCAGCCTCTC
CACCGGCGCCTTCGTCCGCGTCCACCTCCCGCTATTCAGGGACCACTGCGCTCTCGACTCCATCGACGGCATCCTTCTGC
TGCAGCG----GGACCACGACACCGCCGCCCGCCTCCTCAACCCTTTGACGGGCGACATCGTCGACTTTCCGCATCTATG
AGCGTGGA---------TGGGCGCGACGTCGTTGGATGATAAGTGGTGTTGTATCAGAAATATCGATGCTGCCTCCATGA
GCATGGGGGCAGATGGAGTCGTCTCACACATGATTCTGGGGGCGCCTCCTTGGGGCAACATAGCCTTTGCAACCTCCCAA
GAGCAACAATGGAGGGTGTCAAGCTGGTCTCTCCTTCAAATTTATAGGCCCCAATTTTATAGTCC---------------
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>chr5B_1_TraesCS5B01G563200
TGGCCAACCGGAGGGTATGATCTGTTCGTGGCTCGTTTACTCGTTCAAGTGCTGGCCATATATATGTTTTTCATAGATAT
TTCGGTTCTATGTACTATACGTGCTTACATGCTTAGGTATCGATATAAGGTGCATATCGTACCTGCCAGGTTTACTGTTT
ACCCGGAGATTAGTCTAATCGAAAAGGTGCTAATATTTCCAACAACAGTTGCATGCAAACGAACCAGCCTGAGCATGTAT
ATGCCTGATCCTAAAATTAAGGGATCGAATAGCACATAGACTTATCTATACACGTTCTCCACCATGCATGTAGTATACAC
ATGTCTGCAGCTTCAATAGAAGTTGTGTATGTACCTGTGAAATTGTCAAGTTTGTGGATTGTATGGAGTATTAATTTTGT
GAACAAGTATATACCACATATTTGGCGATGAGTATCCTTTTTTCTCGACAAAAAAGTCGACCAAGTTGTCCCCTAAAAAA
AACTCGACCAAGTTGTGTAGAGATTGCGACTAAAAAGAAAGTTGTGTAGGCGAATCAACATGTGGTTGAGTTGGTTAGGT
GGACAGTGGTATCTCCAACCCACCAGGGTTCAAATCCTGGTGCTCGCATTATTCCTGGATTTATTTCAGGATTTCGGGTG
ATGTGCTTTCAGTGGGAGGAGACGTTCCCGCCGACGACGAGGCGCCTACGGTGACTTTGTAAATCTCAAGATGATATGCC
GGCTCAGTCTCTCGGAGGTGCTCATAGGGGTAGGGTGTGCGTGTGTGCGTTCATAGGGATGAGTGTATGCGCGTGTATAT
GAGCGCTTATGTCTGTACTGATGCTAAAAAAAGAAAAAAGAAAGTTGTGTAGAGATGATCACACACGTACGACCAAAGAA
ATTCTATAACACATTTGCATGTGCATGCGTCCTGACCCTCAATCGCCAGGAGGAATCTGCAAGCAGGGGCACGATAAAAC
TTCCGACCCCGAATCAGGCGCCGCCGCCAATGACCACCTTGGCGTTGCCGCAGCACGATTTTTAGGGTCGATCGTCAAGC
CGCATGATGTCATCGTCAAGCCGCAGCACGCGCAGGCGGCGGCAGGTCACTAGGGATGCATCCCCGTGGGCGTCGCTGCA
CGGAGAGCTGCTGGAGCTGGATCTGATCGCGTGGCGGGTGCTGGCGGTGGACCTGCG---GGACTACGTCCGGCTCCGCG
CCGTGTGCGCGCACTGGCGCGCCAGCACCACCTGCCCGAGCGGCCGCGGCATCGTCGAAGGTCGCTTCCACCCACGGCAC
TGGACGATGCTGCCCGAGGGCCACGGCCTCCACCCGGGCCACCGCAAGCTGCGCGATTTCGTCCGTTTCTTCAGCCTCTC
CACCGGCGCCTTCGTCCGCGTCCACCTCCCGCTATTCAGGGACCACTGCGCTCTCGACTCCATCGACGGCATCCTTCTGC
TGCAGCG----GGACCACGACACCGCCGCCCGCCTCCTCAACCCTTTGACGGGCGACATCGTCGACTTTCCGCATCTATG
AGCGTGGA---------TGGGCGCGACGTCGTTGGATGATAAGTGGTGTTGTATCAGAAATATCGATGCTGCCTCCATGA
GCATGGGGGCAGATGGAGTCGTCTCACACATGATTCTGGGGGCGCCTCCTTGGGGCAACATAGCCTTTGCAACCTCCCAA
GAGCAACAATGGAGGGTGTCAAGCTGGTCTCTCCTTCAAATTTATAGGCCCCAATTTTATAGTCCAACCTCGTTCCAGGG
CAAGATATACGTGGTGGGTTTTAGGAAAAGTTTCACCCAACAAGAGGTGCTACAGATAGGCCCACACCGATTATTAGATT
TACGGCAATCACACCCAGCAACAGTTGTATCTACCATCTGGTAGCATGCGGCCTAGAGATCCTGGCGGTCTCTCTCCACG
ACTGTTGCGAGAAGACATCAGTGTACAGACTAGCTGATCTTATGCTGGGAAGGACCACACGGATAACATGCATCGGTGGC
AACGCGCTCTTCATCCAAGGGAGGACGATATGTGTCAGCTCCAAGGCGTTTCCTACCATTGTGGATGACACCATCCTCTT
TCGCAAATGGTTTCAAGATGATCTTGCTCAATACCACCTCGGCAGCGGGAAATTGTTGCCATCAACATATACACCTACCG
GACTATATGCCATGACAAGTCCTTGTAGCATCACTGACCATATCTACACATGTTGCTATCGCCAAAAATGGCCAGTGACG
GGCCTTTTTCTTCTTCTTCCCAATCCACCATTGTCCTCCCTGAGAATAGTTCTTCCTACCCCTGGAGCAGTTTGTGCTGC
TAGGTAAGCTCATTATTTCCCCCCTCGGGAACACTAGTAGAAAAAGGGCCTATTGTCCCGGTTGGTGAGGGCCTTTAGTC
CCGGTTCTGGAACCGGGACTAAAGGGTCGTTACTAAAGCCCCCCCCCCTTCCTAGTCCCGGTTCTTATACGAACCGGGAC
TAAAGGCCCTCCACGTGGCCGTTGCTAGTCCCGGTTGGTAACACCAACCGGTACTAAAGGAAATTTTATGATTTTTTGGG
TATTTTTTCTTGATTTTTAAATTTCTAAATTATTTCAACTTCTAATCTCTAATCACCCCACATCACTGCTCAATTTAACC
TCTAATCTCTAATCACCCCTCATCATTTCAAATCATCGAACTTCCCGGACGGTCACCCATCCTCTCACTACTCCAGCCTG
AGCATGCTTAACTTCCGGGTTCTAT
>chr5B_1087
TCG-----------------------------------------------------------------------------
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-------------------------------------------------CTAGGGACCCATCCCTGTGGGGGACGCTGCC
CGGGGAGCT------GCTGGACCTGATCGCGTGGCAGGTTCTCGCGGTCGGCGATTTGCAGGACTACGCCCGGCTCCGCG
CCGTGTGCGCGCACTGGCGCGCCAGCACCGCCTGCCCGCGTGGCCGTGGCATCGTCGACCAGCGTTTCCACCCACGACAG
TGGATGATGCTGCCCGAGGGCCACGGCCTGTACCCGGGCAGCAGCAGGCTGCGCGGCTTCATCCGCTTCTTCAACCTCTC
CACCGGCGCCTTCGCCCGCGCCCACCTCCCGCTATTCACGGACCACTGAGCCCTCGACTCCATCGACGGCCTCCTCCTGC
TGCAGCG----GGACCATGACACCGTGGTCCGCCTCCTCCACCCCTTCACCGGCGACATCCTTGACTTCCCGCCTTTGGA
GACCCTCCTGAGGCACGTGGGCGCGACGACACCCGACACCAAGTGGTGCCTTGTAAGAAATATTAGTGCCGCCTCCATGA
ACGTGGGCGCGGATGGAGTCGTATCGGTCATGATTTTGATGGCGCACCCTTGGAGCAAGATAGTCTTTGCCACCTCCCAA
GATCGACAATGGAGGGTTTCAAGTTGGTTCGCCT----------------------------------------------
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>chr5D_1097
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--------------------------------------------------------TGCATCCCCGTGGGCGGCGCTGCC
CG-GGAGCT------GCTGGACCTGATCGCGTGGCAGGTTCTTGCGGTCGCCGATTTGCAGGACTACGTCCGGCTCCGTG
CCGTGTGCGCGCACTGGCGCGCCAGCACCGCCTGCCCGCGCGGCCGCGGCATCGTCGACCGGCGCTTCCACCCACGAAAG
TGGATGATGCTGCCTGAGGTCCACGGCCTCTACCTGGGCAACAGCAGGCTGCGCGGCTTCGTCCGCTTCTTCAACCTCTC
CACCGGCGCCTTCGCCCGTGCCAACCTCCCGCTATTCACGGACCACTGCGCCCTCGACTCCATTGACGGCCTCCTCCTGC
TGCAGCGCGCGGGACCACGACACCGCCGTCCGCCTCCTCCACCCCTTCACCGGCGACGTCCTCGACTTCCCGCCTCTGGA
GACCCTCCTGAGGCACGCGGGCGCGGCGACGCCCGACGCCAAGTGGTGTCGTATATGAAATATCGTTGCCGCCTCTATGA
ACGTGGGCGCGAACGGAGTCGTCTCGCTCATGATTTTGATGGCACACCCTTGGAGCAAGATAGCATTTGCCACCTCCGAA
GATCCACAATGGAGGGTTTCAAGCTGGTTCGCCTCCCGAAGTTGTC---------------GTCCAACCTCGTTCCAAGG
AAAGATATATGCGGTCCGTTTTACCACAAGTTTCGCCCAACCAGAGGTGCTAGAGACCGGCCCAC---------------
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>SNPs
-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S------S
---S-----SSSSSS------S-------------S---S--S-----S-S-SSSSS-----------------------
-----------------------------S--------S-------------------SS-S--------------S--S
----S-------------------------S--------S--S---S--------SS--------S-------S------
--------------S-----S-----------------S------------S------------------S----S----
----------------------------S----------S----S--S--S---------S-------S----S---SSS
SS-SSSSS--------------------S--SSS--S-SS---------S----S----------S---S----------
S-S----S--S--------------S-S-------S--SS-----SS------S----S-----------S---------
--S-S------------S----------SSSS-SSS-S--S--S-SSSSSSSSSSSSSSSS----------------S--
S--------S-S---SS------SS-S-------S------S----------S---SS-------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_745
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-----AGTCTCTCGGAGGTGCTCAT-------------------------------------------------------
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>reverse_2362
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-----------------------------------------AAAAGGGCCTATTGTCCCGG-------------------
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