>input_sequence_70453
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-------------------CTATATATTCCCTGCGCGTGCGGTGCGGGGGATCGAGCTTCGCGCGTCAGACTAGACTAGA
GAGATTATAGGAGGCCAGA-------TCACTCGTTATCTTATCCATGCATGATCGTGTGCGCGCAGAGGAATAGGTCATG
CAGTTAC-TGGTT-------GAAGGAGCAAGTCGTACGGCCGGCGTGAT--GCATAACTAAGAGCCGGGCGGCTAGTTCA
ATTTATCGAAGGCATTGCGCTTGTGTGCCTTGAGTACGTGAAAGCGAAACAACCGAGAGAGATACAGGTGAGAGAACCAG
-----CTCCTACTACAACTTAATCGATCTAGTGCTCCGGTCAACAATGGCGCTCCGGCGGCGGCTCCACGTGCCCCTCTT
CCTCCTCCTCCTGGCCGTCGCTTTTCTTGCGTCGCCCGTCGTCGGCCTCCCTCCCGGCGGCTGCTACGAGACGGCGACGA
AGGTGTCCAGGCGGTGCTCGGGGGAGTTCATCAAGGCGCTCTTCTCCGACGACTTGCACGGGGTCAGCCGTAAATGCTGC
GATGAGCTGACCTGCGTCCGCGAGCAGTCGTGCTTCAGCGTGCTCCTGTGGTACTGCCCGCCCGAGGCGTGGGCGCACTG
TTACGGTGGTAAAGCGGCCGCCGGGGTGCCATTACAGGGGAGCCCCTGAGCGCCGGCCGGCCGCCGTCAATCCCGACGGC
GCGATGTCTACGGAGTACGGGCACCAACAATAGGGTGACGTGCAC----ATAAA--------------------------
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------------------------------------------
>chr2A_1_TraesCS2A01G320600
GGCTGTTTTATTTCTAAGTGCATGACATTTTTTTAAGAGGATGAAATTTCCATTTTTAATGGCATGGCGGTTTTATTTCT
AAGTGCATGGCATTCTTATTAATGAGATATGGCATTTTTTATTTTTAATGGCATGATAGTTTTATTTTTAAGTGCACAAC
ATTTTTCTAAAAATAGCATTTTCTAATATTAAGAGATGACATATTTTTACTATTAAGAGATGGCATTTTTATCGTATGAG
ATGCATTTTTT------TGTTTATTAAGATATGCCTTTTTTATTTTAAGAGATT-------------------------G
CATTTTTAATATTAAGAGATGATATTATTTATTTATTT------------------------------------------
---------------------------TATAAGAGATTGCATTTTAATGTTAAGAGATGACATTTTTG------------
------------TTATTTAAGAGATGACATTTTTTATTTAAGAGATGGCTTGATGGCATTTTGTTTACTAAGAGATGGCA
ATTTTTTATCATGTCATTTTAAAAGATGGCACCTTTTGTTTTTGGTCTATAAAA----AATGTTCTCTAATTTTTACAGC
ATGGCATTTTTCATTTTT-CAGATCTAATCTTGT--TTGGGCCTGGAGGCCTTGTAGCCGAAAGGGGGAAACCAGGTTCA
CGAGCTCCCCAGCGCAGACTAAAAAAAAGAGAGCTCCCCAGCGAAGGAAAATGTTCGCTGGTGGATCGACGAGCCAGCGA
ACAAAACGATCGCTGGAGTCTCATCAGAATTTTTCGATGTTTTTTTTTTCTTTTGAATTTCCTGTTCATCCTGAGCTGAA
ATGAGATCGAGAATAGAAGGGGACTTTCGTGTATATTGGTGCTATTCTAGGAGTGTCTCCTAGAATAAATGCAGAGGCGG
TGGAAAGATAAGTCAGGAGAATAAAATTAACTTACTAATTAACCAC-----TGTACATCTCTAAATCAGGAAGAAAGAAA
ATAAATTACTAATTATGTGAATATAA---TAAGGCATTCGGCTGGAGGTAGTGTGCTGCCGAGTTTATTGCTGTCCCCGC
TGTGCTCTTCTCTCTCCACCTATATATTCCCTGCGCGTGCGGTGCGGGGGATCGAGCTTCGCGCGTCAGACTAGACTAGA
GAGATTATAGGAGGCCAGA-------TCACTCGTTATCTTATCCATGCATGATCGTGTGCGCGCAGAGGAATAGGTCATG
CAGTTAC-TGGTT-------GAAGGAGCAAGTCGTACGGCCGGCGTGAT--GCATAACTAAGAGCCGGGCGGCTAGTTCA
ATTTATCGAAGGCATTGCGCTTGTGTGCCTTGAGTACGTGAAAGCGAAACAACCGAGAGAGATACAGGTGAGAGAACCAG
-----CTCCTACTACAACTTAATCGATCTAGTGCTCCGGTCAACAATGGCGCTCCGGCGGCGGCTCCACGTGCCCCTCTT
CCTCCTCCTCCTGGCCGTCGCTTTTCTTGCGTCGCCCGTCGTCGGCCTCCCTCCCGGCGGCTGCTACGAGACGGCGACGA
AGGTGTCCAGGCGGTGCTCGGGGGAGTTCATCAAGGCGCTCTTCTCCGACGACTTGCACGGGGTCAGCCGTAAATGCTGC
GATGAGCTGACCTGCGTCCGCGAGCAGTCGTGCTTCAGCGTGCTCCTGTGGTACTGCCCGCCCGAGGCGTGGGCGCACTG
TTACGGTGGTAAAGCGGCCGCCGGGGTGCCATTACAGGGGAGCCCCTGAGCGCCGGCCGGCCGCCGTCAATCCCGACGGC
GCGATGTCTACGGAGTACGGGCACCAACAATAGGGTGACGTGCAC----ATAAAATAAACCAATTAGGTGACGTGGCGTG
CGTGCA-----------------------CCGGAGAACGTTGTGCGCGCGTGCTTCGTTGCGATTCTGTTTCTGCGTGCG
TAATGTTTTTAGATCACGCGTGTGTCGTGTTTCCACTTGATATTTGCTTCTGTAATTGGGCATAGCACTAGCCGGTCATT
TTAGAGTCGTGCAATTGCATTTCTTTCGTACCACTTTTTGTCTATGAATTTTTGTTTTTAGAAATGAATTCTAAGATTAA
ACATGTGGACGCGTCTAGCCGGCACCCAGCCGCCCAGTATGATTAGCGAGCGGCCTGTTATTTAAGGAAATCTTTTATCC
CTTCTCCTAATTAGAAAATCTTTCTCGTCTAATCCATTTTC-CCGCAACGTATTAAATAGCAACACAACCATATCTTTCG
GTGCATGCACTTTGTTCTCCTATGCATTTATTTGTGGTTTTAGAATTTTAAAAAGGCATAACTTTTAATCCACACATCAG
AATTGCAATCTGTTTTCATAGTTGGAATCTTCGCGACGTGCTCTTTAAAACTAGATCCCTCATAGGTATGTTTGAACGAA
CCAGTCTTCCTGCCAACTAAACATCAATATGTGTGTAACTAGACTACATGCCGTGCCAACTGAGCATATGTGTGTG--TC
AATAGTCTTTCTATCAACTAAACATCAATGTGTGTGCAACTAGACTACATTTCCTTGCCAACTGAGCATATGTGTGTGCC
AATAATCCTGCCAACTAAACATCAATGTGTGTGTAACTAGACTACATTGCCACGCCAACTGAGCATATATATGTGTAACT
AGTCCTGTCAATTAAATATCAATGTGTGTG--CAACTAGACTACATTGCGGCGTCAATTACGCATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAATTAGACTAAATTACAAGCCAACTGAGTATATGTGTGTGCAACTAGT
CCTTCTGGCAACTAAACATTAATGTGTGTGCAACTAGACTAC
>chr7D_1
GGCAGTTTTATTACTAAGTGCATGGCATTTTTATAAAA------------------------------------------
------ATGTAATTTTTATTATTAGGAGATGGCATTT-------------------------------------------
-----------------------TAATATTAAGAGATGGTATTTTTTGT-TATTAAGAGATGGCATTTTTTTATTAAGAG
ATGGATTTTTTAAAAACTTTTTTATAAGAGATGGCATTGTTTTGTTAAGAGATGGCATTTTTCTGTAAATTAAGAGATGG
CATTTTTTATATTAAGAGATGAACTTTTTTATTTTTTTACAAGAGATGGCATTTTTATTATTTAAGAGATGGCTTTTTTA
TATTTAGAGATAGCATTTTTATATTTTTATAAGAGATTACATTTTAGTGTTAAGAGATGGCATTTTTATATTTAGAGATG
GCATTTATTATTTTTTATAAGAAATGGCATTTTTGTGTTAAGAGATGACATTTA------TTGTTTATTAAGAGATGACA
TTTTCTTCAATTATGGCA-----------------TTTTTTTTGTTCTATAAAAAAGAAATGTTCTCTAATTTTTACAGC
ATGGCATTTTTTATTTTTCCAGATCTAATCTTGCACTTAGGTCTGGAGGCCTGGTAGCCGGGAGGGGG------------
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>chr2B_813
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---------------------------------------------------------------AATAAATGCATAGGCGG
AAAAAAGAGAAATCAAGAGAATAAAATTAACTTACTAATTAACAAAAAAAATGTACATCTCTAAATCAGTAAGAAA-AAA
ACAAATTACTAATTATGTGAATATAAAACTAAGGCATTCAGTTGGAGGAAGTGTTCTGCCGAGTTTATTGCTGTACCCGT
TGTGCTCTTCTCTCTCCACCTATATATTCTCTGCGCGCGCGGTGCGGAGGATCGAGCTTGGCGCGTCAGACTAGACTAGA
GAGATTATAGGAGGCCAGAAGCCAGATCACTCGTTATCTTATCCATGCATGATCGTGTGCGCGCAGAAGAATAGGTCATG
GAGTTAGTTAGTTGATTGACGAAGGAGCAAGTCGTACGGCCGGTGTGTGTGGCATAATTAAGAACCGGGCGGGTAGTTCA
ATTTATCGAAGG---------TGTGTGCCTCGAGTACGTGAAAGTGAAACAACCGAGAGAGATAGG---------ACCAG
-----CTCCTACTACAACTTAATCGATCTAGTGCTGCGGCCAACAATGGCGCTCCGGCGGCGGCTCTACGTGCCCCTCCT
TCTCCTCCTCCTGGCCGTCGCTTTTCTGGCGTCGCCCGCCGTCGGCCTCCCTCCGGGCGGCTGCTACGAGACGGCGACGA
AGGTGTCCAGGCGGTGCTCGGGGGAGTTCATCAAGGCGCTCTTCTCCGACGACTTGCACGGGGTCAGCCGTAAATGCTGC
GATGAGCTGACCTGCGTCCGCGAGCAGTCCTGCTTCAGCGTGCTCCTGTGGTACTGCCCGCCCGAGGCGTGGGCGCACTG
TTATGGCGGTAAAGCGGCCGCCTGGGTGCCATTACAAGGGAGCCCCTGAGC----GCCGGCCGCCGTCAATCCCGACGG-
GCGATGTCTACGGAGTACGGGCACCAACAATAGGGTGACGTGCACATGAATGAAATAAACCAATTAGGTGATGTGGCGTG
CGTGCACCGGCCTGCTCCTTCTTGCTGCTCCGGAGAACGTTGTGCGCGCGTGCTTCGTTGCGATTCTGTTTCTGCGTGCG
TAATGTTTTTAGATCACGCGTGTGTAA--TTTCCACTTGATATTTGCTTTTGTAATTGGGCATAGCACTAGCCGGTCATT
TTAGAGTCGTGCAATTGCATTTATTTCGTACCACTTTTTGTCTATGGATTTTTGTTTTTAGAGATGAATTCTAAAATTAA
ACATGT--------------------------------------------------------------------------
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>chr2D_1007
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-------------------------ATTCTCCGCGCGTGCGGTGCGGGGGATCGGGCTTCGCGCGTCAGACTAGACTAGA
GAGATTATAGGAGGCA-------AGATCACTCGTTATCTTATCCATGCAACATCGTGCGCGCGCAGAGGAATAGGTCATG
GAGTTTGTTGGTT-------GAAGGAGCAAGTCGTACGGTCGGTGTGTGGT--ATAATTAAGAGCCGGGCGGGTACTTCA
ATTTATC-AAGGCATTGTGCTTGTGTGCCTTGTGTACGTGAAA------CAACCGAGAGAGATACAAGTGAGAGAATCAG
CTCTCCTCCTACCACAACTTAATCGATCTAGTGCTCCGGTCAACAATGGCGCTCCGGCGGCGGCTCCACGTGTCCCTCTT
CCTCCTCCTCCTGGCCGTCGCTTTTCTTGCGTCGCCGGCCGTCGGCCTCCCTCCCGGCGGCTGCTACGAGACGGCGACGA
AGGTGTCCAGGCGGTGCTCGGGGGAGTTCATCAAGGCGCTCTTCTCCGACGACTTGCACGGGGTCAGCCGTAAATGCTGC
GATGAGCTGACCTGCGTCCGCGAGCAGTCGTGCTTCAGCGTGCTCCTGTGGTACTGCCCGCCCGAGGCGTGGGCGCACTG
TTATGGCGGTAAAGCGGCCGCCGGGGTGCCATTACAAGGGAGCCCCTGAGC----GCCGCCCGCCGTCAATCCCGACGG-
GCGATGTCTACGGAGTACGGGCACCAACAATAGGGTGACGTGCACATGAATGAAATAAACCAATTAGGTGACGTGGCGTG
CGTGCACCGGCCTGCTCCTTCTTGCTGCTCCGGAGAACGTTGTGCGCGCGTGCTTCGTTGCGATTCTGTTTCTGCGTGCG
TAATGTTTTTAGATCACGCGTGTGTAA--TTTCCACTTGATATTTGCTTTTGTAATTGGGCATAGCACTAGCCGGTCATT
TTAGAGTCGTGCAATTGCATTTATTTCGTACAACTTTTTGTCTATGGATTTTTGTTTTTAGAGATGAATTCTAAAATTAA
ACATGT--------------------------------------------------------------------------
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>chr3D_1969
TTAAACT-------------------------------------------------------------------------
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-----TGGACGCGTCTAGCCGGCGCCCAGCCGCCCAGTATGATTAGTGAGCGGCA--TTATTTAAGGAAATTTTTTGTCT
CCTTTCCTAATCAGGAAATCTTTCTCATCTAATCCATTTTC-CCGCGACGTATTAAATAGCAACACAGTCATATCTTTCG
GTGCATGCACTTTGTTCTCCTATGCATTTATTTGTGGTTTCAGAATTTTAAAAAGGCATAACTTTTAATCCGCACATCAG
AATTGCGATCTGTTTTCACCGTTGGAATCTTCGCGACATGCTCTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAATCTTCCTGCCAACTAAACATCAATATGTGTGCAACTAGACTACATGCCGCGCCAACTGAGCATATGTGTATG--AC
AATAGTCTTTCTGTCAACTAAACATCAATATCTGTGCAACTAGACTACATTCCCGCGCCAACTGAGC--ATGTGTGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTGCAACTAGACTACATTGCCGCGCCAACTGAGCATATATATGTGTAACT
AGTCCTGTCAACTAAATATCAATGTGTGTA--CAACTAGACTACATTGCCGCGTCAATTGCACATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAACTAGACTAAATTACAAGCCAACTGAGCATATGTGTGTGCAACTAGT
CCTTCTGGCAACTAAACATCAATGTGTGTGCAAGTAGACTAC
>chr5A_1978
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-----TGGACGCGTCTAGCCGGCGTCCAGCCACCCAGTATGATTAGCGAGCAACCGGTTATTTAAGGAATTTTTTTGTCC
CTTCTCATAATTAGAAAATCTTTCTCGTCTAATCCATTTTC-CCGCAACGTATTAAATAGCAACACAGCCATATCTTTCG
GTGTATGCACTTTGTTCTCCTATGCATTTATCTGTGGTTTCAGAATTTTAAAAATACATAACTTTTAATCCGCACATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCGCGACGTGCTCTTCAAAACTAGATCCCGCATGGGTATGTTTCAACGAA
CTAGTCTTTCTGCCAACTAAACATCAATATGTGTGCAACTAGACTACATGTCGTGCCAACTGAGCATATGTGTGTG--TC
AATAGTATTTCTGTCAACTAAACATCAATGTGTGTGCAACTAGACTACATTCCCTTGCCAACTGAGTATATGTGTGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTGCAACTAGACTATATTGCCGCGCCAACTGAGCATATATGTGTGTAACT
AGTCCTGTCAACTAAATATCAATGTGTGTG--CAACTAGGCTACATTGCGGCGTCAATTACGCATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAATTAGACTAAATTACAAACCAACTGAGCATATGTGTGTGCAACTAGT
TCTGCTGGCAACTAAACATTAATGTGTGTGCAACTAGACTA-
>chr1A_1979
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------GGACGCGTCTAGCCGGCGCCCAGCCGTCCAGTATGATTAACGAGCGGCCGGTTATTTAAGAAATTTTTTTGTCC
CTTCTTCTAATTAGAAAATCTTTCTCGTCTAATCCATTTTT-CTGTAACATATTAAATAGCAACACAGCCATATCTTTTG
GTGCATGCACTTTATTCTCCTATGCATTTATTTGTGGTTTCAGAATTTTGAAAAGACATAACTTTTAATCTGCACATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCGCGACATGCTCTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAGTCTTCCTGCCAATTAAACATCAATATGTGTGCAACTAGACTACATGCCGTGCCAACTGAGCATATGTGTGTG--CC
AATAGTCTTTCTGTCAACTAAATATCAATGTGTGTGCAACTAGACTACATTCCCTTGCCAACTAAGTATATGTGTGTGTC
AATAGTCCTGCCAACCAAACATCAATGTGTGTGCAACTAGACTACATTGCCGCGCCAATTGAGCATATATGTGTGTAACT
AGTACTGTTAACTAAATATCAATGTATGTG--CAACTAGACTGCATTGCGGCGTCAATTACGCATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAATTAGACTAAATTACAAGCCAACTGAGCATATGTGTGTGCAACTAGT
CCTTCTGGCAACTAAACATTAATGTGTGTGCAACTAGACTA-
>chr5A_1979
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------GGACGCGTCTAGCCGGCGTCCAGCCGCCCAATATGATTAGCGAGCGGCCGGTTATTTAAGGAAATTTTTTGCCC
CTTCTTCTAATTAGAAAATCTTTTTCGTCTAATCCATTTTT-CAGCAACATATTAAATAGCAACACAGCCATATCTTTTG
GTGTATGCACTTTGTTCTTCTATGCATTTATTTATGGTTTCAGAATTTTAAAAAGGCATAACTTTTAGTCCGCACATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCACGACATGTTCTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAGTCTTCCTGTCAACTAAACATCAATATGTATGCAACTAGACTACATGTCATGCCAACTGAGCATATGTGTGTG--CC
AATAGTCTTTCTGTCAACTAAATATCAATGTGTGTGCAACTAGACTGCATTTCTTTGCCAACCGAGCATATGTGTGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTGCAACTAGACTACATTGCCGCGTCAACTGAGCATATATATGTGTAACT
AGTCCTGTCAACTAAATATCAATGTGTGTG--CAACTAGACTATATTGCGGCATCAATTACGCATATGTATGTG----CA
GTGTTCTGTCAACTAAACATCAATATGTGTGTAATTAGACTAAATTACAAGTCAACTGAGCATATGTGTGTGCAACTAGT
CCTTCTGGCAACTAATCATTAATGTGTGTGCAACTAGACTA-
>chr5A_1979
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------GGACGCGTCTAGCCGGCGCCCAGCCGCCCAATATGATTAGCGAGCGGCCGGTTATTTAAGGAATTTTTTTGCCC
CTTCTTCTAATTAGAAAATCTTTTTCGTCTAATCCATTTTT-CAGCAACATATTAAATAGCAACACAGCCATATCTTTTG
GTGTATGCACTTTGTTCTTCTATGCATTTATTTATGGTTTCAGAATTTTAAAAAGGCATAACTTTTAGTCCGCACATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCACGACATGTTCTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAGTCTTCCTGTCAACTAAACATCAATATGTGTGCAACTAGACTACATGTCATGCCAACTGAGCATATGTGCGTG--CC
AATAGTCTTTCTGTCAACTAAACATCAATGTGTGTGCAACTAGACTGCATTCCCTTGCCAACCGAGCATATGTGTGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTCCAACTAGACTACATTGCCGCGTCAACTGAGCATATATATGTGTAACT
AGTCCTGTCAACTAAATATCAATGT--GTG--CAACTAGACTATATTGCGGCATCAATTACGCATATGTGTGTG----TA
GTGTTCTGTCAACTAAACATCAATATGTGTGTAATGAGACTAAATTACAAGCCAACTGAGCATATGTGTTTGCAACTAGT
CCTTCTGGCAACTAATCATTAATGTGTGTGCAACTAGACTA-
>chr5A_1979
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------GGACGCGTCTAGCCGGCGCCCAGCCTACCAATATGATTAGCGAGCGGCCGGTTATTTAAGGAAATTTTTTGCCC
CTTCTTCTAATTAGAAAATCTTTTTCGTCTAATCCATTTTT-CAGCAACATATTAAATAGCAACACAGCCATATCTTTTG
GTGTATGCACTTTGTTCTTCTATGCATTTATTTATGGTTTTAGAATTTTAAAAAGGCATAACTTTTAGTCCGCACATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCACGACATGTTCTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAGACTTCGAGTCAACTAAACATCAATATGTGTGCAACTAGACTACATGTCATGCCAACTGAGCATATGTGTGTG--CC
AATAGTCTTTCTGTCAACTAAACATCAATGTGTGTGCAACTAGACTGCATTCCTTTGCCAACCGAGCATATGTGTGTGCC
AATAGTCCTGCTAACTAAACATTAATGTGTGTGCAACTAGACTACATTGCCGCGTCAACTGAGCATATATATGTGTAACT
AGTCCGGTCAACTAAATATCAATGT--GTGTGCAACTAGACTATATTGCGGCATCAATTACGCATATGTGTGTG----CA
GTGTTCTGTCAACTAAACATCAATATGTGTGTAATTAGACTAAATTACAAGCCAACTGAGCATATGTGTGTGCAACTAGT
CCTTCTGGCAACTAATCATTAATGTGTGTGCAACTAGACTA-
>chr7A_1979
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------GGACGCGTCTAGCCGGTGCCCAGCCACCTAGTATGATTAGCAAGCGGCCGGTTATTTAAGGAAATTTTTTGTCC
CTTCTCCTAATTAGAAAATCTTTCTCACCTAATCCATTTTC-CCGCAACGTATTAAATAGCGACACAACCATATCTTTCG
GTGCATGCACTTTGTTCTCCTATGCATTTATTTGTGGTTTCAGAATTTTAAAAAGACATAACTTTTAATCCGCACATCAG
AGTTGCGATCTATTTTCACAGTTGAAATCTTCGCGACGTGTTTTTCAAAACTAGATCCCGCATGGGTATGTTTCGACGAA
CTAGTCTTCCTGCTAACTAAATATCAATATGTGTGCAACTAGACTACATGCCGTGCCAACTGAGCATATGTGTGTG--TC
AATAGTCTTTCTGTCAACTAAACATCAATGTGTGTGCAACTAGACTACATTCCCTTGCCAACTGAGTATATGTGTGTGTC
AATAATTCTGCCAACTAAACATCAATGTGTGTGCAACTAGACTACATTGCCGCGCCAACTGAGCATATATGTGTGTAACT
AGTCCTGTCAACTAAATATCAATGT--GTGTGCAACTAGACTACATTGCGGCGTCAATTACGCATATGTGTGTGCAACTA
GTGTCCTGTCAACTAAGCATCAATATGTGTGCAATTAGACTAAATTACAAGCCAACTGAGCATATGTGTGTGCAACTAGT
CCTTCTAGTAACTAAACATTAATGTGTGTGCAACTAGACTAC
>chr1D_1980
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-------GACGCGTCTAGCCGGCGCCCAGCCGCCCAGTATGGTTAGCGAGCGGCCGGTTATTTAACGAAATTTTTTGTTC
CCTTTCCTAATCAGGAAATCTTTCTCATCTAATCCATTTTCTCCGTAAAGTATTAAATAGCAACACATCCATATCATTCA
GTGCATGCGCTTTGTTCTCCTATGCATTTATTTGTGGTTTCAGAATTTTAAAAAGGCATAACTTTTAATCCGCACATCGG
AATTGCGATCTGTTTTCACCGTTGGAATCTTCGCAACATGCTCTTCAAAACTAGATCCCGCATGGGTATGTTTCAACGAA
CTAGTCTACCTGCCAACTAAATATCAATATGTGTGCAACTAGACTACATGCCGCGCCAACTGAGCATATGTGTGTGTGCC
AATAGTCTTTCTGTCAACCAAACATCAATGCGTGTGCAACTAGACTACATTCCCGCGTCAATTGACCATATGTGTGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTATACCTAGACTACATTGCCGCGCCAACTGAGCATATATGTGTGTAACT
AGTCCTGTCAACTAAATGTCAATGT--GTGCGCAACTAGACTACATTGCCGCGTCAATTGCGCATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAACTAGACTAAATTACAAGCCAATTGAGCATGTGTGCGTGCAACTAGT
CCTTCTGGCAACTAAACATCAATATGTGTGCAACTAGACTAC
>chr1A_1985
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------------GTCTAGCCGGCGCCCAGCCGCACAGTATGATTAGCGAGCGGCCAGTTATTTAAGAAAAAATTTTGTCC
CTTCTCCTAATTAGAAAATCTTTCTCATCTAATCCATTTTC-CCGCAACGTATTAAATAGCAACACAGCCATATCTTTCG
GTGCATGCACTTTGTTCTCCTATGCATTTATTTGTGGTTTCAGAATTTTAAAAAGGCATAACTTTTAATCCGCATATCAG
AATTGCGATCTGTTTTCACAGTTGGAATCTTCGCGACGTGCTCTTCAAAACTAGATCCCGCATGGGTATGTTTCAACGAA
CTAGTCTTTCTGCCAACTAAACATCAATATGTGTGTAACTAGACTACATGCCGTGCCAACTGAGGATATGTGTGTG--TC
AATAGTCTTTCTGTCAACTAAA-ATCAATGTGTGTGCAACTAGACTACATTCCCTTGCCAACTGAGCATATGTGCGTGCC
AATAGTCCTGCCAACTAAACATCAATGTGTGTGCAACTAGACTACATTGTCGCGCCAACTGAGCATATATATGTGTAACT
AGTCATGTCAACTAAATATCAATGT--GTGTGCAACTAGACTACATTGCGGCGTCAATTACGCATATGTGTGTGCAACTA
GTGTCCTGCCAACTAAACATCAATATGTGTGCAATTAGACTAAATTACAAGCCAACTAAGCATATGTGTCTGCAACTAGT
CCTTCTGGCAACTAAACATTAATGTGTGTGCAACTAGACTAC
>SNPs
---S--------S-----------S-------S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS---SS---S------S-SS--S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS---------------SS--S----SSS--------------------S-SS--S---
---S--------------S---SS-----S---S-S--S--S-S---------S--------------------------
-------S--------------SS--S-------S---------------------------------------------
--------------------------------------S-------S------------S-------S------------
--------------S-S-----S---S-------SSS----------S-S-SSSSSSSSS-------S---------S--
S---S--SSSS-S-SSSSSSSSSSSSSSSSSSSSS--S------S-----------------------------------
-----------S---------------------S----S--S----------S-------SS------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S------
SSS-----S--S---S---------------------------S-S-----------------------S------S---
-S-------------------------------------S-S------S-----S-------------------S----S
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
S-----S------------------------------------S---SS--------S--------------S-------
-----------------S--------------------------S---------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
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---S--S-----------------------------S--------------SSSS------------------------S
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------------------------SSSS--------------------S------------------------------
----------------------S-----------------------S---------------S-----------S-----
-----------------------S-------------------------------S---------------S----S---
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
------S-----------S--------------------------S-------------S---S---------S------
-S------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----------S--------------------------------------------------------------------
------------------------------------------------------------S-------------------
------------------------------------------
>forward_744
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----CTCCCCAGCGCAGACTAAAA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_1840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
GCGATGTCTACGGAGTACG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>forward_789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AATGTTCGCTGGTGGATCGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
>reverse_2419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------TAGTTGGAATCTTCGCGACGT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------
