>input_sequence_70300
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----------------------------------------------------------------------GCGCGCGCAC
ACCACCTTCGGCGCGCCGGCTCGGGGCGTCGACCATGGAGGGCGAGGCGCCGCAGGCGCACCAGCCGCCGCTGAACGGCG
TCAGCCTCGACCTCCGCCTCGACACGATGACGCAC---------------------CACCACGGCACCTGGCGCCCGGCG
TCCCTTTCTCCCGCGGACTACC------AGCAGCAGCA---CGACGGCAAGGAGGCCTTGTCGTGCAACTACTGCCAGCG
CAAGTTCTTGAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACAAGCT---------------CGAGCGCACCCTCG
CCAAGCGCGGCCGCGACGCTGACGCAGGCAAAAGCGC------CGCCGCCACGCCTTCCTCGCCGGCCGACGCCCA----
-----------------------CAGCTGGCTCCA---CGGCGACGGTGATCTTTGGGCTTACTCTGCTGCTTCACCCGC
GGCGAGCATGAGCATGGGC---------ATGGGCATGGGC------GGCTGGGCTGGCACTCGCCGCACCACGACGGCCG
GCGGGGAGGCCACGGCGGAGATG------GACTTGTCGCTCAAGCTGTGCCTCTGAGAACCATGACGGACGGCGGGCAGG
CCACGACGGAG-TACATTCCAGCGGCACTACGTGCATGCGCCCAGCGTGTCAACAAGTACTGGTGA------TGTTCTTA
ATTATTGCAAGCACATGGCGATTGGTTAATTATTGGAATTATAGCTACTACCTAGTGCAATGGGTTGTTTTAGCTCATCC
ATCTATACAATATATATAAACCCCCTCATGTCTC----------------------------------------------
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--------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G361000
TTGTGTTGCAACGCTCTCGTTTGTTTGCTAGGCTTGCTAGTCGTGATGCTCCTACTTGCAACTACACTATCAATGGGCAT
GAATACACAAAGGGATACTATCTTGCAGATGGTATATATCCTCCTTGGTGCACATTTATCAAGAGCATCAAAGAACCCAA
AACA---AAAGAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAGAGAGTATTCGGTGTTTTG
CAATCTAGGTTTGCCATTGTTCGTGGTCCTGCTCGTTTTTGGGATAAGAAAACCCTAAAAAACATCATGACTTGCCGTGT
TATCCTGCACAATATAATTCTTGAAGATGAGAGAGG-AATGAACTTAGAATTCTTTTACGACAGTATGGGTAGCCGTGTC
AAACCAGCTAGAGACCCAAACCGC----ATTAGAGCTTTTCTTCAGACATACAAGGGGATTGAAAATGCAGACACACACT
TTCAGCTTCAGGAAGGTCTTATTGAGCACCATTGGCAAA-GGG-CTGGACAATGACTAATTTTTGTATTCATGACAAATT
TTGTATTGCATTATTTTAAGTTTGCTACGGTGAATTGAATAATTATTTGTAATGCGGATGATTATTGTTTTATGTTTGAT
TTGAATAATTC---AGTTTG-TTTTTTATTGTTGAATTATGTTGGATTCGAGATTTGCGGGCTGATGATATGCGGGGATG
CAGCGGCGTAAAGAGCAGAACCTGCATAGCCGATCCGT-AAAAAAACATATTTCGCAAATATTTTTTTTTTACGGATCCG
TTTGAAGGGTCTGCATCTGTGTCAGCCCGCACCGGCCTGTGAAAGCTGTTTTGTGCGAACTGCAAACGCGTTTTGCGGGC
CGATATTTTGTGGGGTCTGCTAAGTTGCTTCTAAACGGGCAAGCACCGGTTCACCCAGTGGGCTCGCTGCTCTTTATATA
CCGGCGCGCTGGTTCACACTTGACA--------------CCTCCTTCTCCTTCATCCTCCACACTTTCCCGCGCGCGCAC
ACCACCTTCGGCGCGCCGGCTCGGGGCGTCGACCATGGAGGGCGAGGCGCCGCAGGCGCACCAGCCGCCGCTGAACGGCG
TCAGCCTCGACCTCCGCCTCGACACGATGACGCAC---------------------CACCACGGCACCTGGCGCCCGGCG
TCCCTTTCTCCCGCGGACTACC------AGCAGCAGCA---CGACGGCAAGGAGGCCTTGTCGTGCAACTACTGCCAGCG
CAAGTTCTTGAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACAAGCT---------------CGAGCGCACCCTCG
CCAAGCGCGGCCGCGACGCTGACGCAGGCAAAAGCGC------CGCCGCCACGCCTTCCTCGCCGGCCGACGCCCA----
-----------------------CAGCTGGCTCCA---CGGCGACGGTGATCTTTGGGCTTACTCTGCTGCTTCACCCGC
GGCGAGCATGAGCATGGGC---------ATGGGCATGGGC------GGCTGGGCTGGCACTCGCCGCACCACGACGGCCG
GCGGGGAGGCCACGGCGGAGATG------GACTTGTCGCTCAAGCTGTGCCTCTGAGAACCATGACGGACGGCGGGCAGG
CCACGACGGAG-TACATTCCAGCGGCACTACGTGCATGCGCCCAGCGTGTCAACAAGTACTGGTGA------TGTTCTTA
ATTATTGCAAGCACATGGCGATTGGTTAATTATTGGAATTATAGCTACTACCTAGTGCAATGGGTTGTTTTAGCTCATCC
ATCTATACAATATATATAAACCCCCTCATGTCTCATATACTATTATGTACTAGTATATATAGTATTTTATTATTATAAGT
ATGTTCATATATTATATATATAAGATATATTTTAAAGTGAGTTAAATGAAAAATTACAAGTTAGCCCATTATTTTTATTA
TATACGTGAAACACGCACATATTTGTACATAAATGTCTGGTTCTTGTCTACCGATCGGGTCTCATTTCTTGGTAGTTACT
CTTTCCGTCCGAAAATACTTGTCATCAAAATGGATAAAAAGAGATGACAAGTATTTCCGGACAGAGGGAGTACTTGCTAG
CTGAACGGCGGCCATTTTCTCATCGGTTAGAGCATCTTCAACAGATGTGTGGTTGTGCGGCGTGCTATTTTTTTATATAT
TTTTTGCAGCATCGAAATAGCCTTTTAGCATGCTGAGCTGGTGTTTTGCATGACCAAAAGCGCAAAAACACGGCATCCAA
TCTAGCAGCCCTACCTAAAGCAGCTCAGATTTTGCAGCACGCATAAACGGGCGTACCAAATATACAACGCGTGATGCAGT
TTTCCCCAACAAGCTGAACCTTGTTTAACGCGCATAGGATTATAACGCGGCTGTTGAAGTGCTATTTTCAGTTGCACGCG
TGCTATATAACAGCAAAAACATTTAATTGCCGCCGTGTCACTGCTCTCTGCCTATTGCAACACCTAGCCTAGCTGCTACA
CTAGATCACATATCCACCATGATCTAACTTGATGTTTAGAGCAATTTTAGCAGACCCCACATCTCGTCGGCCCGCAAAAC
GTGTTTGTAGTTTACGCAAAACTGCTTTTGCGGGCCGGCGCGGGCTGGCACAGATGCAGACTCCTCAAACGGATTTGTAA
AAAAATATATTCACAGAATATGCTTGTTTATGGGTCGGCTATGCGGGTTCTGCTCGGGCACCACCGTGACAACCCGCAAA
TACATAAACTGCAAATCTCGCATTTGACATAGAATTTCACAAACAAGTTCAAATTCAAACGACATAAACAGTTT
>chr1D_2
-TGTGTTGCAACGCTCTCATTTGTTTGCTAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTACACTATCAATGGGCAT
GAATACACAAAGGGGTACTATCTTGCAGATGGTATATATCCTTCTTGGTGCACATTTGTCAAGAGCATCAAAGAACCCAA
AACA---AAAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAAAGAGCATTCGGTGTTTTG
CAATCTAGGTTTGCCATTGTCCGTGGTCCTGCTCGTTTTTGGGATAAGAAAACCCTGAAGAACATCATGACTTGCTGTGT
TATCCTGCACAATATGATTCTTGAAGATGAGAGAGG-AATGAACTTAGAATTCTTTTACGACAATGTGGGTAGCCGTGTC
AAACTAGCTAGAGACCCAAACCGC----ATTAGAGCTTTTCTTCAAACATACAAGGAGATTGAAAATGCAGACACACACT
TTCAGCTTCAGGAAGATCTCATTGAGCACCATTGGCAAA-GGG-CTGGACAGTGACTAATTTTTGTATTCATGACAAGTT
TTGTATTGCATTATTTTAGGTTTGCTACGGTGATTTGAATAATTATTTGTAATGCGGATGATTATTATTTTATGTTTGAT
TTGAATAATTC---AGTTTG-TTTTTGATTGTTGAATTATGTTGGATTTGAGATTTGCGGGCTGATGATATGCGGGGATG
CAGCGGCGTAAAGAGCAGAACCCGCATAGCCGATCCGTAAAAAAAACATATTTCACGAATATAC-TTTTTTACGGATCCG
TTTG-GGGGTTTGCATCTATGCCAGCCCGCGCCGGCCCATAAATGCTGTTTTGCGAGAACTGCAAACACATTTTGCGGGC
TGACGTTTTGCAGGGTCTGCTAAAGTTGCTCTAA----------------------------------------------
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--------------------------------------------------------------------------
>chr7A_2
-TGTGTTGCAACAGTCACATTTGTTTGCTA-GCTTGCTAATGGTGATGCTCCTGCTTGCAACTACACTATCAATGGGCAT
GAATACATAAATGGGTACTATCTTGCAGATGGTATATACCCTCCTTGGTGCACATTTGTTAAGAGCATCAAAGAACCCAA
AACA---AAAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACACTGAAAGAGCATTCGGTATTTTG
CAATCTAGGTTTGCCATTGTCCGTGGTCCTGCTCGTTTTTGGGATAAAAAAACCTTGAAGAACATCATGACATGCTGTGT
TATCCTGCACAATATGATTCTTAAAGATGAGAGAGG-AATGAACTTAGAATTCTTTTACGACAATGTGGGTAGCCGTGTC
AAACCACCTAGAGGCCCAAACCAC----ATTAGAGCTTTTCTTCAAACATACAGGGAGATTGAAAATGCAGACACACACT
TTCAACTTCAAGAAGATCTCATTGAGCACCATTGGCAAA-GGGGCTGGACAGTGACTAATTTTTGTATTCATGACAAGTT
TTGTTTTGCATTATTT-AAGTTTGCTACAATGATTTGAATAATAATTTGTAATGCGGATGATTATTGTATTATGTTTGAT
TTGAATAATTC---AGTTTG-TTTTCGATTGTTGAATTATATTGGATTTGATATTTGCGGGCTGATGATATGC-GGGATG
CAGCGACGCAAAGAGCAGACCCCGCAAAGCCGACCCGT-AAAAAAGTATATTCCGCGAATACAT-TTTTTTACGGATCTG
TTTGGGGGGTCTGCATCTGTGCCAGCCCGAGCCAGCCCGCAAAAGTAGTTTTACGCGAACTGCAAACGCGTTTTGCGGGC
CGGCAGGATGCGGGGTCTGCTAGAGTTGCTCTAAA---------------------------------------------
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--------------------------------------------------------------------------
>chr2B_2
-TGTGTTGCAACGGTCACATTTGTTTGCGAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTACACTATCAATGGGCAT
GAATACACAAAGGGGTACTATCTTGCAGATGGTATATATCCTTCTTGGTGCACATTTGTCAAGAGCATCAAAGAACCCAA
AAC----AAAAAACAATGTGAATTTGCAAGGATGCAAGAGGCAG-CCCGAAAAGACACTGAAAGAGCATTCAGTGTTTTG
CAATCTAGGTTTGTCATTGGCCGTGGTCCTGCTCGTTTTTTGGATAAGAAAACCTTGAAGAACATAATAACATGCTGTGT
TATCCTGCACAATATGATTCTTAAAGATGAGAGAGG-ATTGAACTTAGAATTCTTTTATGACAATGTGGGTAGCCGTGTC
AAACCAGCTAGAGACCCAAACCGC----ATTAGAGCTTTTCTTCGGACATACAAGGAGATTGAAAATGCAGACACCCACT
TTCAACTTCAGGAAGATCTCATTGAGCACCATTGGCAAA-GGG-CTGGACAGTGACTTATTTTTGTATTCATGACAAATT
TTGTATTGCACTATTT-AAGTTTGCTACAGTTATTTGAATAATTATTTGTAATGCGGATGCTTATTGTATTATGTTTGAT
TGGAATAATTC---AGTTTG-TTTCCGATTGTTGAATTATGTTGTATTTGATATTTGCGGGCTGATGATATGC-GGGATG
CAGCAGCGCAAAGAGCAGACCCCCCAAAGCCGACCCGT-AAAAAAATATATTCCGTGAATATAC-TTTTTTACGGATCCG
TTTCGGGGGTCTACATCTGTGCCAGCCCGAGCCAGCCCGCAAAAGCTGTTTTGCACGAACTGCAAACGCGTTTTGCGGGC
CGGCGGGATGCGGGGTTTGCTAGAGTTGCTCTAA----------------------------------------------
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--------------------------------------------------------------------------
>chr2A_2
-TGTGTTGCAACGGTCTCATTTGTTTGCTAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTACACAATCAATGGGCAT
GAATACACAAAGGGGTACTATCTTGCAGATGGTATATACCCTCCTTGGTGCACATTTTTCAAAAGTATCAAAGAACCCAA
AACT---AAAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAAAGAGCATTCGGTGTTTTG
CAATCTAGGTTTGCCATTGTCTGTGGTCCTGCTTGGTTTTGGGATAAGAAAACCTTGAAAAATATCATGACATGATGTGT
TATCCTGCACAATATAATTCTTGAAGATGAGAGATG-AATGAACTTGGAATTCTTCCACGACAATACGGGTAGCCGTGTC
AAACCAGCTAGAGACCCTAACCAC----ATTAGATCTTTTCTTCAGACATACAAGGAGATTGAAAATGCAAACACACACT
TTCAACTTCAGGAGGATCTTATTGAGCACCATTGGCAAA-G-GGCTGGACAATGACTCATTTTTGTATTCATGACAAGTT
TTTTATTGCATTATTT-AAGTTTGCTACGGTGATTTGAATAATTATGTGTAATGTGGATGATTATTGTATTATGTTTGAT
TTGAATAATTT---AGTTTTGTTTCCGATTGTTGTATTATGTTGGATTTGATATTTGCGGGCCGATGAGATGC-GGGATG
CAGCGGTGCAAAGAGCAGACCCCGCAAAGCCGACCCCT-AAGAAAACATATTCCGTGAATATGC-TTTTTTACGGATCCG
TTTGAGGGGTCTGCATCTGTGGCCGTCCGCACCGGCCCGCAAAGGCCATTTTGCGTGA----CAAACGCGTTTTGCGGGC
CGGCGGGATGTGGGGTCTGCTAGAGTTTCT--------------------------------------------------
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--------------------------------------------------------------------------
>chr7B_2
-TGTGTTGCAACGGTCTCATTTGTTTGCTAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTACACTATCAATGGGCAT
GAATACACAAATGGGTACTATCTTGCAGATGGTATATACCCTCCTTGGTGCACATTTGTCAAGAGCATCAAAGAACCCAA
AACA---AAAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAAAGAGCATTCGGTGTTTTG
CAATCTAGGCTTGCCATTGTCCGTAGTCCTGCTCGTTTTTGGGATAAGAAAACCTTGAAGAACATCATGCCATGATGTGT
TATCCTGCACAATATGATTCTTGAATATGAGAGAGG-ATTGAACTTAGAATTCTTTTACGATAAAGTGGGTAGCCGTGTC
AAACCAGCTAGAGACCCAAACCGC----ATTAGAGCTTTTCTTCAGACATACAAGGAGATTGAAAATGTTGACACTCATT
TTCAACTTCAGGAAGATCTCATTGAGCACCATTGACAAA-GGG-CTGGACAGTGACTTATTTTTGTATTAATGACAAGTT
TTGTATTGCACTATTT-AAGTATGCTACGGTTATTTGAATAATTATTTATATTGCAAATGATTATTGTATTATGTTTGAT
TCGAATAATTC---AGTTTTTC--TTGATTTTTGAATTATGTTGTATTTGATATTTGCGGGCTGATAATATGC-GGGATG
CAGCGGCTCAAAAAGCAGACCCCGCAAAGCCGACCCGT-AAAAAAATATATTCCACGAATATAC-TTTTTTACGGACCCG
TTTGGGAGGTCTGCATCTGTGTCAGCCCGAGCCAGCCCGCAAAAACTGGTTTGCCCGAACTGCAAACGCGTTTTGCGGGC
CGGCGGGATGCGGTGTCTGCTAGAGTTGCTTTTA----------------------------------------------
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--------------------------------------------------------------------------
>chr1B_2
-TGTGTTGCAACGGTCTCATTTGTTTGTTAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTACACTATCAATGGGCAT
GAATACA-AAAAGGGTACTATCTTGCAGATGGTATATATCCTCCTTGGTGCACATTTGTCAAGAGCATCAAAGAACCCAA
AACG----AAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAAAAAGCATTCGGTGTTTT-
CAATCTAGGCTTGCCATTGTCCGTGATCCTGCTCGTTTTTGGGATAA-AAAACCTTGAAGAACATAATGACATGTTGTGT
TATCCTGCACAATATGATTCTTGAAGATGAGAGAGG-ATTGAACTTAAAATTCTTTTACGAGAATGTGGGTAGTCGTGTC
AAACCAGCAAGAGACCCAAACCGCATTGATTAGAGCTTTTCTTCACACATACAAAGAAATTGAAAATGTAGACACCCACT
TTCAACTTCACGAAGATCTCATTAAGCACCATTGGCAAG-GGG-CTGGACAGTGACTTATTTTTGTATTCATGAAAATTT
TTGTATTGCACTATTT-AAGTTTGCTACGGTTATTTGAATAACTATTTGTAATGCGGATGATTATTGTATTATGTTTGAT
TGGAATAATTC---AGTTTG-TTTGTGATTGTTGAATTATATTGTATTTGATATTTGCGGGCTGATGATATGC-GGGATG
CAGCAGCGCAAAGAGCAGACCCCGCAAAGCCGACCCGT-AAAAAAGTATATTCCGTGAATATAC-TTTTTTACGGATCCG
TTTGGGAG-TCTGCATCTGTGCCAGCCCAAGCCGACCCGCAAAAGCTGTTTTGTGCGAACTGCAAACGCGTTTTGCGGGC
CGACGGGATGCGGAGTCTGTTAGAGTTGCTCTAAA---------------------------------------------
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--------------------------------------------------------------------------
>chr1A_2
-TGTGTTGCAACGGTCTCATTTGTTTGCTAGGCTTGCTAGTGGTGATGCTCCTACTTGCAACTACACTATCAATGGGCAT
GAATACACAAAGGGGTACTATCTTGCAGATGGTATATACCCTCCTTGGTGCACATTTGTCAAAAACATCAAAGAACCCAA
AACT---AAAAAACAATGTGAAATTGCAAGGGTGCAAGAGGAAG-CC-GAAAAGACATTGAAAGAGCATTTGGTGTTTTG
CAATCTAGGTTTGCCATTGTCCGTGGTCTTGCTCGTTTTTGGGATAAGAAAACCTTGAAAAATATCATGACATGTTGTGT
TATCCTGCACAATATGATTCTTGAAGATGAGAGAGG-AATGAACTTGGAATTCTTCTACGACAATGTGGGTAGCCATGTC
AAACCAGCTAGAAACCCTAACCGC----ATTAGAGATTTTCTTCAGACATACAAGGAAATTAAAAATGCAAACACACACT
TTCAACTTCAGAAGGATCTCATTGAGCACCATTGGCAAAAGGG-CTGGATAGTGACTAATTTTTGTATTCATGACAAGTT
TTGTATTGCATTATTT-AAGTTTGCTATGGTGATTTGAATAATAATTTGTAATGTGGATGATTATTGTATTATGTTTGAT
TTGAATAATTT---AGTTTT-GCTTTCGATTTTGTATTATGTTGGATTTGATATTTGCGGGCCGTTGAGATGC-GGGATG
CAGCGGCGCAAAAAGCAGATCCTGCAAAGCCGACCCGT-AAAAAA-CATATTCCGTGAATATAC-TTTTATACGGGTCCA
-TTGAGGGCTCTGCATCTGTGCCCATCCGTGCCGGCCTGCAAAGGCCATTTTGCGTGAACTGCAAACGCGTTTTGCAGG-
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--------------------------------------------------------------------------
>chr3D_4
---TGTTGCAACGGTCTCATTTGTTTGCTAGGCTTGCTAGTGGTGATGCTCCTGCTTGCAACTATACTATCAATGGGCAT
GAATACACAAAAGGGTACTATCTTACAGATGGTATATACCATCATTGGTGCACCTTTGTCAAGAGCATCAAAGATCCCAA
AACT---AGAAAACATTATGAATTTGCAAGGGTGCAAGAGGCAGCCC-GAAAAGACATTGAAAGAGCATTCGGTGTTTTG
CAATCTAGGTTTGCCATTGTCCGTGGTCCTGCTCATTTTTGGGATAAGAAAAACTTGAAAAATATTATGACATGCTGTGT
TATCCTTCACAATATGATTCTTGAAGATGAGAGAGGAAATGAACTTGGAATTCTTCTACGATAATGTGGGTAGCCGTGTC
AAACCAGCTAGAGACCCTAACTGC----ATTAGAGCTTTTCTTCAGACATACAAGGAGATTGAAAATGCAAACACACACT
TTCAACTACAGGAGGATCTCATTGAGCACTATTGGCAAA-GGG-CTGGACAGTGACTCATTTTTGTATTCATGACAAGTT
TTGTATTGCATTATTT-AAGTTTTCTTCGGTGATTTGAATAATTATTTGTAATGTGGATAATTATTGTATTATGTTTGAT
TTGAATAATTATTTAGTTTG-CTTTCGATTGTTGTATTATATTGGATTTGATATTTGTGGGCCGATGAGATGC-GGGATG
CAGCGGCGCAAAGAGCAGACCCCGCAAAGTCGACCCGT-AAAAAAACATATTCCGCGAATATAC-TTTTATACAGGTCCG
TTTGAGGGGTCTGCATCTGTGGCCGTCCATGCCGGCCCGCAAAGGCCGTTTTCCGCGAACTGCAAACGCGTTTTGCGGGC
CGGCGGGATGCGGGGTCTGCTAGAGTTGCTCTAA----------------------------------------------
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--------------------------------------------------------------------------
>chr1D_62
-------------------------------------------------------------CTACACTATCAATGGGCAT
GAATACACAAAGGGGTACTATCTTGCAGATGGTATATACCCTCCTTGGTGCACATTTGTCAAGAGCATCAAAGAACCCAA
AACAAAAAAAAAACAATGTGAATTTGCAAGGGTGCAAGAGGCAG-CCCGAAAAGACATTGAAAGAGCATTCGGTGTTTCA
CAATCTAGGTTTGCCATTGTCCGTGGTCCTGCTCGTTTTTGGGATAAGAAAACCTTGAAGAACATCATGACATGTTGTGT
TATCCTGCACAATATGAATCTTGAAGATGAGAGAGG-AATGAACTTAGAATTCTTTTACGACAATGTGGGTAGCCGTGTC
AAACCAGCTAGAGACCCAAACCGC----ATTAGAGCTTTTCTTCAGACATACAAGTAGATTGAAAATGCAGACACGCATT
TTCAACTTCAGGAAGATCTCATTGAGCACCATTGGCAAA-GGG-CTGGACAGTGACTTAATTTTGTATTCATGACAAGTT
TTGTATTGCATTATTT-AAGTTTGCTACGGTGGTTTGAATAATTATTTGTAATGCGGATGATTATTGTTTTATGTTTGAT
TTGAATAATTC---AGTTTG-TTTTCGATTGTTGAATTATGTTGGATTTGATATTTGCGGGCTGATGATATGT-GGGATG
CAGCGGCGCAAAGAGCAGAACCCGCATAGCCGACCCGT-AAAAAAGCATATTCCGCGAATATAC-TTTTTTACGGATCCG
TTTGGGGGGTCTGCATCTGTGCCAGCCCGCGCCAGCCCGCAAAAGCTGTTTTACGCGAACTACAAACGCGTTTTGCGGAC
CGGCGGGATGCGGGGTCTGCTAGAGTTGCT--------------------------------------------------
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>chr5D_895
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------------------------------CTAAACGGGCAAGCACTGGTTCATCCAG---GCTCACTGGTCTTTATATA
CCGTCGCGCTGGCTCACACTTCACACCGCCCCGTACGTGCCTCCTTCTCCTTCTTCCTCCACACTTTCCCGCGCGCGCAC
ACCACCTTCAAA-------------GCGTCGACCATGGAGGGTGAGGGTGAGACGCCTTACCAGCTGTTGTCGAACCGTA
TCAGCCTCGACCTCCGCCTCGATGCGATGACGCAC---------------------CACCGCCGCACCCGGCGCCCGGCG
TCCCCTGCTCCCGCGGACTACC------AGCAACAGCA---CCATGGTAAGGAAGCCTTTTCGTGCAACTACTGCCAGCG
AAAGTTCTTTAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACAAGAACGAGCGCGCCCTCGCCGACCGCACCCTCG
CCAAGCGCAGACGCGACGCCTCTGCAGGCATAAACGCCGCCGTCGCCGCCACGCCTTCCTCGCCGGCCGTCATCCA----
-----------------------CAGCTGGCTCCA---CGGCGGCGGTGATCTTTGGGCCTACGCTACTTCACCCGCGTC
------------------------------GAGCATGGGCATGGGTGGCTTGGCTGGCACTCGCCGCACCACGACGGCTG
CCGGGGAGGACACGGCGGAGCTG------GACTTGTCGCTCACAGCTG--------------------------------
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--------------------------------------------------------------------------
>chr5B_987
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--------------------------------------------------------CTCCACACACTCCCGCCCGCGCGC
ACCATCTTCGACGTGCCGGCTCCGGCCATCGACTATGGAGGGCCAGGCGCCGCAGTCGCACCAGCTGCTGCTGCACGGCG
TCAGACTCGAACTCCGCCTCAACCCCACCACGCAA---------------------CAGCGAGACGGCCGGCTCCCGGCG
TCCCCCTCTGCGGCTGCAGTCGCCGCGGAGCACCAGCGCGGCGGCGGGCGGGAGACCTTCTCCTGCAACTACTGCCACCG
CAAGTTCTTGAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCCCACAAGCT---------------CGAGCGCACCCTCG
CCAGGCGCAGCCGCTACGCCGA------------------------CGCCACGCCTTCCTCCCCGGCCGTCGCCCA----
-----------------------CCGCTGGCTGCA---CGGCGGCGGGGAGCTCTGGGGCTACGCTACTTCACCCGCGGC
------------------------------GAGCATGGGC------GGCTGGGCTGGCACTCGCAGCACCAAGACGGCCG
GCGGGGAGGCCACGGCGGAGAATGAGATAGACTTGTCGCTCAAGCT------CTGAGCACCGCCACGGCCGGCGGGGAGG
CGGTGGAGTTCATATATTCGAGCGGCACTACCTGCATGCG-CCAGCGTGTCAACAAGTACCACTACTACTAGTGTTCTTA
ATTGTTGCAAGCACCCGGTGATTAATTAACTATTGAGTAC-------CTACCTAGTGCAATGGATTGTTTCAGCTCATCA
AT------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr5D_1045
--------------------------------------------------------------------------------
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----------------------------------ATGGAGGGCGAGGCGCCGCAGTCGCACCAGCTACTGCTGCACGGCG
TCAGCCTCGACCTGCGCCTCGACACGGCCACGGCCAC------GCACCAGCAGGGGCAGCGCGGCGCACGGCGCCCGGCA
TCCCCTCCCCCTGCTGCTCCCGCGGCCCTCGAGAACGC------CGGCAGGGAGGCCTTCGCCTGCAACTACTGCCACCG
CAAGTTCTTGAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACAAGCT---------------CGAGCGCACCCTCG
CCAAGCGCAGCCGCGACGTCC------------------------------------CCTCCGAAACCGTCGCCACCACG
ACTGCTTCCTCTTCCACAGCCGCCCACTGGCTCCACGCCGGCGGCGGGGAGCTCTGGGGTTACTCTGCTTCGGCCCCTGC
TCTGGACTCCGCGACGATGGCGCCACTGATAAGCATGGGCATG---GGCTGGGCTGGCACTGGAAGCACCGCAGCGGCCG
GCGGGGAGGCGGTGGCGGAGATG------GACCTGTCGCTCAAGCTCTG-------------------------------
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--------------------------------------------------------------------------
>chr5B_1045
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----------------------------------ATGGAGGGCGACGCGCCGCAGTCGCACCGGCTGCTGCTGCACGGCA
TCAGCCTCGACCTGCGCCTCGACACGGCCACGGCCGCGCACCAGCACCAGCAGGGGCAGCGCGGCGCCCGGCGCCCGGCA
TCCCCTCCCCCTGCTGCTCCCGCGGCCTTCGACAACGC------CGGCAGGGAGGCCTTCGCCTGCAACTACTGCCACCG
CAAGTTCTTGAGCTCGCAGGCGCTCGGCGGCCACCAGAACGCGCACAAGCT---------------CGAGCGCACCCTCG
CGAAGCGCAGCCGCGACGTCC------------------------------------CCTCCCCAGCCGTCGCCACCACG
ACTGCTTCCTCTTCCACGGCCGCCCACTGGCTCCACGCCGGCCGCGGGGAGCTCTGGGGTTACTCTGCTTCGGCCCCTGC
TCCGGACTCCGCGACGATGGCGCCACTGATGAGCATGGGCATG---GGCTGGGCTGGCACTGGCAGCACCGCAGCGGCAG
GCGGAGAGGCGGTGGCGGAGATG------GACCTGTCGCTCAAGCTCTG-------------------------------
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>SNPs
S-----------------S----------------------S--------------------------------------
--------------S------------------------------------------S----------------------
----------S--------------------------------------------------S----S-------------
--------------------S-----------------------------------S------------------S----
---------------------------------------------------------------S----------------
--------------------------------------------------------S-----------------------
---------------S----------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------S---------------------S-------------------------------
--------------------------------------------------------S-----S-S---------------
-----S----------------------------------S---------------------------------------
---S-------------------SS-SSS-----------------S------S----SSS----S---S----------
---S--------S--------S-------------------------------S--------------------------
----------S--S--------S--------------------------------S---------S--S-----------
------------------------------------------------------------S-------S-----------
----S------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------S----------S--S-------S--S-----------------------------------S----------
-------------------------------------------S-------------------------S-SS-S--S--
SS--SS-SSSSSS-S-SSS------------S------------------------------------------------
----------------------------------------------S--SSS-----S---SSS----S-------S---
-SSS-SS-SSS---S----S-----------S--------S-------------------SSS-SS--------------
---S----------SS--S----SS----S-----SSSSSSSSSSSS----------------S------S--------S
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTGGGGTCTGCTAAGTTGCT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_2741
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGCTTGTTTATGGGTCGGCT----------------------------------------
--------------------------------------------------------------------------
