>input_sequence_70292
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-----------------------------------------------ATGGGTGCTGCGGCGACCGCGGCCGCCTGTTTC
TCCTCCGCATCCTCAGGCGTGTCACGGTGCCGCTACTGCCGCGTCAAGGCGCAGGCGACGTCATGGGCAGGAGGGGCGGA
GGAGCTGGTGCGGTCGGGCGCGGTGAAGGCCGTCCGGCCGAGGGACGCGGCGGAGGTCATGGGCTCCGAGGGGTTCCAGC
TGCTGGACGTCCGGCCGGCCTGGGAGCACGACCGCGCCGCCGTTCGGGGGTCCGTGCACGTGCCGCTGTTCATGGCCGAC
GACGACATGGGCCCAGTGACGCTGCTCAAGAAGTGGGTCCACCTGGGCTACATCGGGCTCTGGACCGGGCAGTCCTTCAC
CAAGATGAACGACCGCTTCCTCGACGACGTCGCCGCCGCCGTCGCCGGGAAGGACGCCAAGCTGCTCGTCGCATGCGGCG
AAGGCCTCAGGTAATTAGTAG---ACTATC----------------------CGGATGATTAAGTGGCATGCATGTGCTG
TCCAAGTTGACTGATGTGGATAAAGCTTTTGGTTGGGCTGTTAATCAATTCAAGGTCGCTGATTGCGGCGAGGATGCTGC
ACGACGACGGGTACAAGAACGTGGCATGGCTCGCCGGGGGGTTTAGCAAGTCCGTCGACGGTGACTTCGCCGAGCTGGAG
GGGGAGAGCAAGCTCCGGTATGCCACCATCGGGGGAGTATCCTACATCTTCCTTCAGATCTTGCTGCTGCTGCGGGTGGT
ACAGTGA-------------------------------------------------------------------------
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>chr4B_1_TraesCS4B01G195100
CTGAAGGTGCATAACGCATTCCTTCGTTTCCTTTCCC-TTTCTGAAATTCAGAAACGGGTTTCACGTGGCTACTGGTTCT
CAGGTCAAAGTGTACATGGGCGATGGTTGGCAGCACGATTTTAAGCAGACGCATTTCGATTCATATTCCCCTCCAGATTT
TTATGCAAAGGTATTGCCAGAACCACTG---TTCATCATCAAAATGATAAGTAGAATCCGAAAAGAAGTGACCAAAAACA
TTGGAAATCAGCGTGCAATGTATACAAGTGAAAAATAATAATCCAACGCCAACTAAAGCAAGAACTGAAATTTGAATGCC
GCCCAACGAGCAGGTGGGCATAGCCGGAGTTCCATCGGACTCGGTGATGAGGAAGACTAGAGTCGTGGAGGATAGCTGGG
TCCCGATGTGGGAAGATGGGTTCACCTTCCCGTTGACCGTGCCGGAGATCGCTCTGCTGCGTGTGGAGGTGCACGAGTAT
GATGTGAACGAGGACGACTTCGGCGGGCAGACCGTCCTTCCTGTGTCGGAGCTGTGGCCGGGGATCCGCACCGTGCCGCT
CTTCGACCACAAGGGGATGAAGTTCAAGAGCGTGAAGCTTCTCATGAGCTTCGAGTTTGTCTAGTCACCTTTTGGCCGGC
AGACTAGGAGTGCGTGTGTTGCGTTGCACATGTGTTGTAGTATATCATGCGTGTCATATGATAGCTAGCTGGAGTAGATT
AGATTGATTTGTCGCAGATGTAAGAACTTTTGGCGGCTGGTAGAACCGCGAAAAAAC--TTGAGTTGCTTCCCGTCACCG
CCTGATCTGTTTGGAGTGATCGTGCGATCAGGAATGTAAGAGGCCCGCTGTGTCGACGGTGCTGATTGAACCT-AGAAAA
TCATAGTGGATAAGAGACCTGGAAACGTATCCTTCCATGGTTCCCTGGCAAGGGCAAGGGGACAACAAGACAATCGCCAG
AGCACGGAGCTGAAGAAACTAAGCACGAGCAGGCGGAATCCATGTCCATGGGTGCTGCGGCGACCGCGGCCGCCTGTTTC
TCCTCCGCATCCTCAGGCGTGTCACGGTGCCGCTACTGCCGCGTCAAGGCGCAGGCGACGTCATGGGCAGGAGGGGCGGA
GGAGCTGGTGCGGTCGGGCGCGGTGAAGGCCGTCCGGCCGAGGGACGCGGCGGAGGTCATGGGCTCCGAGGGGTTCCAGC
TGCTGGACGTCCGGCCGGCCTGGGAGCACGACCGCGCCGCCGTTCGGGGGTCCGTGCACGTGCCGCTGTTCATGGCCGAC
GACGACATGGGCCCAGTGACGCTGCTCAAGAAGTGGGTCCACCTGGGCTACATCGGGCTCTGGACCGGGCAGTCCTTCAC
CAAGATGAACGACCGCTTCCTCGACGACGTCGCCGCCGCCGTCGCCGGGAAGGACGCCAAGCTGCTCGTCGCATGCGGCG
AAGGCCTCAGGTAATTAGTAG---ACTATC----------------------CGGATGATTAAGTGGCATGCATGTGCTG
TCCAAGTTGACTGATGTGGATAAAGCTTTTGGTTGGGCTGTTAATCAATTCAAGGTCGCTGATTGCGGCGAGGATGCTGC
ACGACGACGGGTACAAGAACGTGGCATGGCTCGCCGGGGGGTTTAGCAAGTCCGTCGACGGTGACTTCGCCGAGCTGGAG
GGGGAGAGCAAGCTCCGGTATGCCACCATCGGGGGAGTATCCTACATCTTCCTTCAGATCTTGCTGCTGCTGCGGGTGGT
ACAGTGAAATCGAACGGAAATACGGAATGCAATGGTAGTATAGAGTGGCGCGCCCTATGCTCCAAGTTAGCTTCTCAATC
CAGTTCTGCTCTCCGCCTTTTGATTTGCTTAATTTTGCTTCAGCGAAGTGTTGTATGATAGATCGAATGATAGTTGCAAA
GTAATTCAGATTCAGCCGCGCTCCCC-TTGTCAACATCTTGTACTACATCTTGATCTATTATAAAACCATGTTCCATATC
TTCCTGCTGAGCCCCCTTTCTCCGGACTGAGATCCCATGCCTTGCCAGAGGCGGGTCACGGTGTGCCTTGCGCCCCTACA
TCCATCGTCCAAAATAATCCTACGGCTGTAACCAGTTCACACCCAGTCAACGAGATTCAACACAGGCAAAAATTACGCGG
GCGGCCAGACACATCGCGCGGGCGGGTCGGGGAAAACTGCGCGGGCTGGGGCATCGGCCGCCGCCCCCCGCCGCCGCCGC
TCTCCGGCCGTCCCCGCCGACGCTCTCCGGCCGCCCTCGCTTCCGCTCTCCAGCCGCTGCCGCCGCCCCCGGCGCCGCTC
TCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCGA
GCTCCAGCCGCGGCCACTGAAGGAAACGGCGTCGGCAGGTTCCTCCGT
>chr4D_1
CTGAAGGTGCATAACGCATTCCTTCGTTTCCTTTCCC-TTTCTGAAATTCAGAAACGGGTTTCACGTGGCTACTGGTTCT
CAGGTCAAAGTGTACATCGGCGATGGTTGGCAGCAGGATTTTAAGCAGACACATTTCGATTCATATTCCCCTCCAGATTT
TTATGCAAAGGTATTGCCAGAACCACTGTATTTCATCATCAAAATGATAAGTAGAATCCGAAAAGAAGTG-CCAAAAACA
TTGGAAATCAGCGTGCAATGTATACAAGTGAAAAATAATAATCCAACGCCAACTAAAGCAAGAACTGAAATTTGAATGCC
ACCCAACGAGCAGGTGGGCATAGCCGGAGTTCCATCAGACTCGGTGATGAGGAAGACTAGAGTCGTGGAGGATAGCTGGG
TCCCAATGTGGGAAGATGGGTTCACCTTCCCGCTGACAGTGCCGGAGATCGCTCTGCTGCGTGTGGAGGTGCACGAGTAT
GATGTGAACGAGGACGACTTCGGCGGGCAGACCGTTCTGCCTGTGTCGGAGCTGTGGCCAGGGATCCGCACCGTGCCGCT
CTTCGACCACAAGGGAATGAAGTTCAAGAGCGTGAAGCTTCTCATGAGCTTCGAGTTTGTCTAGTCACCTCTTGGCCGGC
AGACTAGGAGTGCGTGTGTTGCATTGCACATGTGTCGTAGTATATCATGCGTGTCATATGATAGCTAGCTGGAGTAGATT
AG-TTGATTTGTCGCAGATGTAAGAACTTTTGGCAGCTGGTAGAACCGCGAAAAAACTTTTGAGTTGCTTCCCGTCACCG
CCTGATCTGTTAGGAGTGATCGTGCGATCAGGAATGTAAGAGGCCCGCTGTGTCGACGGTGCTGATTGAACCT-AGAAAA
TCATAGTGGATAAGAGACCTGGAAACGTATCCTTTCATGGTTCCCTGGCAAGGGCAAGGGGACGACAAG-----CGCCAG
AGCACGGAGCTGAAGAAACTAAGCACGAGCAGGTGGAATCCATGGCCATGGGTGCTGCGGCGACCGCGGCTGCCTGTTTC
TCCTCCGCATCCTCAGGCGTGTCACGGTGT---------CGCGTCAGGGCGCAGGCGACGTCGTGGGCGGGAGGGGCGGA
GGAACTGGTGCGGTCGGGCGCGGTGAAGGCCGTCCGGCCGAGGGACGCGGCGGAGGTCATGGGCTCCGAGGGGTTCCAGC
TGCTGGACGTCCGGCCGGCCTGGGAGCACGACCGCGCCGCCGTTCGGGGGTCCGTGCACGTGCCGCTGTTCATGGCCGAC
GACGACATGGGCCCAGTGACGCTGCTCAAAAAGTGGGTCCACCTGGGCTACATCGGGCTCTGGACCGGGCAGTCCTTCAC
CAAGATGAACGACCGCTTCCTCGACGACGTCGCCGCCGCCGTCGCCGGGAAGGACGCCAAGCTGCTCGTCGCATGCGGCG
AAGGCCTCAGGTAATTAGTAGTAGACTATAGATACTTTGCTGCGGTGACAAACGGATGATTAAGTGGCATGCCTGTACTG
TCCACGTTGACTGATGTGGATAAAGCTTTTGGCTGGGCTGTTAATCAATTCAAGGTCGCTGATTGCGGTGAGGATGCTGC
ACGAGGACGGGTACAAGAACGTGGGATGGCTCGCCGGGGGGTTCAGCAAGTCCGTCGACGGTGACTTCGCCGAGCTGGAG
GGGGAGAGCAAGCTCAGGTACGCCACCATCGGGGGAGTATCCTACATCTTCCTTCAGATCTTGCTGCTGCTACGGGTGGT
GCAGTGAAAATCGA-------ACGGAATGCAATGGTGGTATGGAATGGCGCGCCCTCTGCTCCAAGTTAGCCTCTCAATC
CAGTTCTGCTCTCGGCCTTTTGATTTGCTTAATTTTGCTTCAGCCAAGTGTTGTATGGTGGATCGAACGATAGTTACAAA
GTAATTCAGATTCAGCCGCGCTCCCC-TTGTCAACATCTTGTACTACAT-------------------------------
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>chr4A_1
CTGAAGGTGCATAATGCATTCCTTCCTTTCCTTTTTCGTTTCTGAAATTCAGAAACGGGTTTCACGTGCCTACTGGTTCT
CAGGTCAAAGTGTACATGGGCGATGGTTGGCAGCAGGATTTTAAGCAGACACATTTCGATTCATATTCCCCTCCAGATTT
TTATGCAAAGGTATTGCCAGAATCACTGTGTTTCATCATCAAAATGATAAGTAGAATCGGAAAAGAAGTG-CCAGAAACA
TTGGAAATCAGCGTGCAATGTATACAAGTGA--------------ACGCCAACTGAAGCAAGAACTGAAATTTGAATGCC
GCCCAACGAGCAGGTGGGCATAGCCGGAGTTCCGTCGGACTCGGTGATGAGGAAGACTAGAGTCGTGGAGGATAGCTGGG
TCCCAATGTGGGAAGATGGGTTCACCTTCCCGCTGACCGTGCCGGAGATCGCTCTGCTGCGTGTGGAGGTGCACGAGTAC
GATGTGAACGAGGACGACTTCGGCGGGCAGACCGTCCTTCCTGTGTCGGAGCTGTGGCCGGGGATCCGCACCGTGCCGCT
CTTCGACCACAAGGGGATGAAGTTCAAGAGCGTGAAGCTTCTCATGAGCTTCGAGTTTGTCTAGTCACCTCTTGGCCGGC
AGACTAGGAGTGCGTGTGTTGCATTGCACATGTGTTGTAGTGTATCATGCGTGTCATATGATAGCTAGCTGGAGTAGATT
AGATTGATTTGTCGCAGATGTAAGACCTTTTGGCGGCTGGTAGAACCGTGAAAAGACTTTTGAGTTGCTTCCCGTCACCG
CCTGATCTGTTAGGAGTGATCGTGCGATCAGGAATGTAAGGGGCCCGCTGTGTCGACGGTGCTGATTGAACCTAAGAAAA
TCATAGTGGATAAGAGACCTGGAAACGTATCCTTCCATGGTTCCCTGGCAAGGGCAAGGGGACGACGAGCCAATCGCCAG
AGCACGGAGCTGAAGAAACTAAGCACGAGCGGGCGGAATCCATGGCCATGGGTGCTGCGGCGACCGCGGCCGCCTGCTTC
TCCTCTGCATCCTCGGGCGTGTCTCGCTCT---------CGCATCAGGGCGCAGGCGACGTCGTGGGCAGGAGGGGCGGA
GGAGCTGGTGCGGTCGGGCGCGGTGAAAGCCGTCCGGCCGAGGGACGCGGTGGAGGTCATGGGCTCAGAGGGGTTCCAGC
TGCTGGATGTCCGGCCGGCCTGGGAGCACGACCGCGCCGCCGTTCGGGGGTCCGTGCACGTGCCGCTGTTCATGGCCGAC
GACGACATGGGCCCAGTGACGCTGCTCAAGAAGTGGGTCCACCTGGGCTACATCGGGCTCTGGACCGGGCAGTCCTTCAC
CAAGATGAACGACCGCTTCCTCGACGACGTCGCCGCCGCCGTCGCCGGGAAGGACGCCAAGCTGCTCGTCGCATGCGGCG
AAGGCCTCAGGTAATTAGTAG---ACTATATATACTTTGCTGCGGTGACAAACGGATGATTAAGTGGCATGCCTGTACTG
TCCACGTTGACTGATGTGGATAAAGCTTTTGGCTGGGCTGTTAATCAATTCAAGGTCGCTGATTGCGGTGAGGATGCTGC
ACGACGACGGGTACAAGAACGTGGCATGGCTCGCCGGGGGTTTTAGCAAGTCCGTTGACGATGACTTCGCCGAGCTGGAG
GGGGAGAGCAAGCTCCGGTACGCCACCATCGGGGGAGTATCCTACATCTTCCTTCAGATCTTGCTGCTGCTACGGGTGGT
GCAGTGAAAATCGA-------ACGGAATGCAATGGTGGTATGGAATGGCGCGCCCTCTGCTCCAAGTTAGCCTCTCAATC
CAGTTCTGCTCTCGGCCTTTTGATTTGCTTAATTTTGCTTCAGCCAAGTGTTGTATGGTAGATCGAACGATAGTTACAAA
GTAATTCAGATTCAGCCGCGCTCCCCTTTGTCAACATCTTGTACTACAT-------------------------------
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>SNPs
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-----------------------------------S--------------S-----------------------------
----------------------------------------------------------------------S---------
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----S---------------------------S-----------------------------------------------
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----------------------------------------------------------------------S---------
----------------------S---------------------------------------------------------
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-----------S--------------------------------------------------------------------
---------------------------------------------------------------S-----S----------
--------------------------------------------S-----------------------------------
-----------------------------SSSSSSSSSS-------S---------------S-----------------
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-----------------------------S------------------------------------------S---S---
----S---------------------------S-----------------------------------S-----------
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--------------------S--------------------------------------------------S--------
S--------SSSS-SSSSSSS---------------S----S--S-----------S--------------S--------
-------------S------------------------------S------------S---------S-------S----
-------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_812
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------------------------------------------------------------------------CGTCACCG
CCTGATCTGTTT--------------------------------------------------------------------
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>reverse_2026
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-------------------------ACTGAGATCCCATGCCTTGC-----------------------------------
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