>input_sequence_70290
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-------------------------------------------------------------ATGGTTTACTGCCTCACTC
GGTTTGGGAATGTTTATGTGCTCCACCTACCGGAACGCCGCCGCCGCGAACCCGTCATCATCGAGGACCAGACATTAGCA
GAGGATCTTGTAACGCGTAACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAACGCGCCGGCTAGCATGCA
ACCACTGCTCTTGTCTT---------------------CGGCGAGCAGTTTCACCCCACTGTA-CATCGCTGTTTCGGAT
TTGACGAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTGTACCAGATCTGGAGGAATGCTACTTGTACCGTCACTTT
GCATCTGGTGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTGTTCTCAAGTATAATCCCCGACGCAGGCCTT
GCTGGGACGCGGTGGCTGACTTAGGGGGATACTCGGTGTTTGTTGGGAGGAGCAATGCGGTGTCAATGCATGCCGAAGGT
GTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTGGGAGAGGTAGGGATCAAGGCATGGTATTTGACATGGGGAC
CGGGAAATCTACACCTTGCCTTCCCTCTACGGCCGGTGTCGTTCCGGGGCCTCTACAGTGCACATTCTGCTGGTACTTTC
CGAGGGAGGTAGTGAATAACTGC---AATACAAATGAATTAGGTGTTTATGGGACCGGAGCAAGGGTTCGGGCTCAACGT
TCACAAGACATGTCACAATGA-----------------------------------------------------------
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---------------------------------------------------------------
>chr4A_1_TraesCS4A01G311500
GCAAGCAAGGAAGGATGGAGGGGGCGGGC-----GGCCGGCCGGCGGGCAGTCTCTTCCCTTTCTCTTTTGCTACGCAAC
GACGG-----AGGAAAGTTTTAATTTAGTCTTGGTTTTGGTAAGATTTTAAAAAAAAGGAGCGAATATGGTAAGATTTGA
CTTGATTTCCGTATCCGGAGGGATAAGTTTTGATTGTGTTGTGAAATTTTTGATTTGATTTTATTAAGTTAATCCATGAG
GTGATTTTGGGAAAG---TATCGATCAGCTATAAAGAAGGAAGTCAGGCCAAGCCCATCGTGAAACCCTAGGCCCACATA
CAATCCCTCCATTCCTCACAGAAAAAGAGG-CAGGAATCCTCTCC--TCCGCAGCCAGCCATGTCGTCGTTCCAAGGCTG
GATAGATCTCCCGCCGGAGCTCCTCACTCGCGTCGCCGATGGCCTCGACGACCTCAGGTTCTACACCAGCGTGCGGGGCA
CCTGCACGGCATGGCGTCGCGCGCTCGCGCCGCCTACGCCATCGCTGCTCGTCCTCCACCGCGACGGCGCCACCAGACGT
CGGCCCGCCGCCATCGTCTCGCTCCCCGCGCACCGCTCCTTCGGCCTCAAG----GCAATCCCCTCAGGCTCGTCCTGCC
CCAACGCCTTG-CCCCCGATGCGCGGCTCCTTCGAGTTCACGTCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGG
CGGGTGGCTTGCCTTTTCCGTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCGCCGAGA
TTCTCCTACCGCCGCTCATCTACGACACCCGCTTGCTCTCCAAGATCGTCTTCGTGCCTGACCCCACTAGGGACGACTTC
ACCGCCGCCACCATCTGTGACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGGTGGGCCATCCTTGACCGCGT
CCGTCTTGCCACCGGAGACCAGCTCATCGATGTCATCTACCATCAAAATGGTCAAAATGGTATGGTTTACTGCCTCACTC
GGTTTGGGAATGTTTATGTGCTCCACCTACCGGAACGCCGCCGCCGCGAACCCGTCATCATCGAGGACCAGACATTAGCA
GAGGATCTTGTAACGCGTAACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAACGCGCCGGCTAGCATGCA
ACCACTGCTCTTGTCTT---------------------CGGCGAGCAGTTTCACCCCACTGTA-CATCGCTGTTTCGGAT
TTGACGAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTGTACCAGATCTGGAGGAATGCTACTTGTACCGTCACTTT
GCATCTGGTGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTGTTCTCAAGTATAATCCCCGACGCAGGCCTT
GCTGGGACGCGGTGGCTGACTTAGGGGGATACTCGGTGTTTGTTGGGAGGAGCAATGCGGTGTCAATGCATGCCGAAGGT
GTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTGGGAGAGGTAGGGATCAAGGCATGGTATTTGACATGGGGAC
CGGGAAATCTACACCTTGCCTTCCCTCTACGGCCGGTGTCGTTCCGGGGCCTCTACAGTGCACATTCTGCTGGTACTTTC
CGAGGGAGGTAGTGAATAACTGC---AATACAAATGAATTAGGTGTTTATGGGACCGGAGCAAGGGTTCGGGCTCAACGT
TCACAAGACATGTCACAATGATGTGTCGCCAAGATAGCTTGGTGACATAGTGAGCACCACCGGCCTGGAAGTGATGTTTA
TCATGCATGACAAGAAATCTTGCAAAGTGTAATTGCTTGTTGTGTCCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAA
ACCACTTTTCAACCCAATAGAACTGATGGAAGGATTACATTTGCAGCCAATGGTACAAACAATTTTTGAAGCTTCATTAG
CAGCCAATGAAAGGGAAAAGGATGGTGAGAAGTTTGAGAAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAA
TGTCTTGAGAAGAATACATAATAAGTAATACATGGTACGTTGTGTTGGTTT-AGTTCCCATGCTTGGATTATGTTGAAGG
TAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTTCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAGTACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTATTCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTC-TCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTATCGGAGGAACACTTTGTGTGCTACCAAACATCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr4B_3
--AAGCAAGGAAGGATGGAGGGGGGCGTGCGACTGGCGGGCGGGCAGGCAGTCTTCTCTTGTGCTGCTGTGCAACGACAG
ACGCAATGCAAGGAAAGTTTTAATTTACTCTTGGTTTTGGTAAGATTTTA--AAAAAGGACCAAATATGTTAAGATTGGT
TTTGATCCCCGTATTCGGAGGGGAAAGTTTTGATTGGGTTGTGAAATATTCGACTTGATTTGATTAAATTAATGCATGCC
TTGATTTTGGAGAAGTACTATCGATTTGGGTTAAAGAAGGAAGTCAGGCCAAGCCCGCCGAAAAACCCTAGGCCCACACA
CAATCCCTCCACTCCTCACCAAAACGGAGGACAGGAATCCCGA---------------------CGTTGTTCCAGGGCTG
GGCAGATCTGCCGCCGGAGCTCCTCCGCCGTGTCGCTGATGGTCTCGACGACCTCAGGTTCTACACCAGCGTGCGGGGCA
CCTGCACGACCTGGCGTCGCGAGCTCGCGCCGCCGGCGCCGTCGCTGCTCGTCCTCCTCCACGACGATGCCACCAGGCGT
CGGCACGCCGCCGCCGTCTCGATCCCCGCGCATCGCTCCTTCGGCCTCGAG----GCAATCCCCTCAGGCTCGTCCTGCC
CCAACACCTCG-CCCCCCATGCGCGGCTCCTTTGAGTTCACGGCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGG
CGGGTGGCTTGTCCTCTCCATCTGCCTCTACGACGGCCAAAGCCTGCTCACCTTCTTCCACCCAGTCACCGCCACCGAGA
TCCTCCTACCACCGCTCATCTACGACACCCGCTTGCTCTCCAAGATCGTCTTCACGCCTGACCCTGCTAGGGATGACTTC
GCCGCCGCCACCATCTGCGACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGGTGGGCCGTCCTTGACCGCGT
CCGTCTTGCCACTGGAGACCAGCTCATCGATGTCGTCTACCATCAAAATGGTCAAAATGGTATGGTTTACTACCTCACTC
GGTTTGGGAATGTCTATGTGCTCTGCCTACCGGAACGCCGCCTCCGGGAACCCGTCATCATCGAGGACCAGACATCAGCA
GAGGATCTTGGAACGTGTAACATGCGCATCATTCGAATGCACAATGCCGGACCAGACCTGAACGCGTCGGCTAGCGTGCA
ACCACTGCTCTCGTCTT---------------------CGGTGGGCAATATCGCCCCACCATA-CGTCACTATCTCGGCT
TTCACGAGTGCCAAGAACCTAGTGTTCTGCAATGGCAACATGTACCAGATCTAGAGGAATGCTAGTTGTACGGTCACTTT
GCAGTTGCCGGGAGGTGAGCATCGCCGTATAGAGGAGGATGAAATATTTGTTCTCAAGTATGATCCCCGGCGCAGGCCAT
GCTGGGACGCAGTGGCTGACTTGGGGGGATACTCGATGTTTGTTGGGAGGAGCAATGCGGTGTCGATGCATGCCGAAGGT
GTTCCAGGGCTCAAGGGCAATTGTGTCTACTGGATAGGTGGGAGAGGTAGGGATCAGGGCATGGTCTTTGACATGGGGTC
TAGGAGGTCTACACCTTGCCTTCCTCCTGCTGTTGGTGTCGTTCCGGGGCCTCAACAGTGCACGATCTGCTGGTACTTTC
CGAGGGAGGTAGCGAATAACTGC---AATACAAATGAATTAGGTGTTTATGGGACCCGAGCAAGGGTCCGGGCTCAACGT
GCACAAGACATGTCACAATGATGTGTCGCCAAGATAGCTTGGTGACATAGTGAGCACCACCGGCCAGAAAGTGATGTTTA
TCATGCATGACAAGAAATCCTGTAGAGTGTAATTGCTTGTTGTGTCCAAGCCTGGTGATAAGCGAGGAGGACAAAGACAA
ACCACTTCTCAATCCAATAGAACTGATGGAAGGATTGCATTTGCAGCCAATGCTAGAAACAGTTGTTGAAGCTTCATTAG
CAGCCAATGAAGGGGAAAAGGATGGTGAGAAGCTTGAGAAGAACAAAAGATTTGA--GTATTTGTGTCTGAGATGATCAA
TGTCTTGAGAAGAATATATAATAAGTAGTACATGTTATGTTGTGTTGGTTT-AGTTCCCATGCTTTGATTATGT------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>chr4D_81
--------------------------------------------------------------------------------
----------AGGAAAGTTTTAATTTAATCTTGGTTTTGGTAAGATTTTT--AAAAAGGACCGAATATGTTAAGATTTGA
TTTGATTCCCGTATTCGGAGGGGAAAGTTTTGATTCGGTGGTGAAAGATTCGATTTGATTTGATTAAATTAATGCCTGCC
TTGATTTTGGAGAAG---TATCGATTTGCTATAAAGAAGGAAGTCAGGCCAAGCCCACCATGAAACCCTAGGCCCACACA
CAATCCCTCCATTCCTCATAGAAAAAGAGG-CAGGAATCCC--CC--TCCGCCGCCAGCCATGCCGCCGTTCCAGGGCTG
GACAGATCTGCCGCCGGAGCTCCTCCGCCACGTCGCCGATGGCCTCGATGACCTCAGGTTCTATACCAGCGTGCGAGGCA
CCTGCACCACGTGGCGTCGCGCGCTCGCGCCACCGGCGCCGTCGCTGCTCGTCCTCCTCCGCGACGACGCCACCAGGCGT
CGGCACGCCGCCATCGTCTCGCTCCCCGCGCACCGCTCCTTCGGGCTCAAG----GCAATCCCCTCAGGCTCGTCCTGCC
CCAACGCCTCCCCCCCCCATGCGCGGCTCCTTCGAGTTCACGGCCACCTACCCGATTAGGAGCTGCCTCGGTTGCGGAGG
CTGGTGGCTTGCCCTCTCGGTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCACCGAGA
TCCTCCTACAACCGCTCATCTACGACACCCGCTTGCTCTCCAAGATCGTCTTCGCGCCTGACCCCGCTAGGGACGACTTC
GCCGC---------------------------------------------------------------------------
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---------------------------------------------------------------
>chr4A_255
--------------------------------------------------------------------------------
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---------------------------GCTATAAAAAAGGAAGTCAGGCCAAGCCTACCGTGAAACCCTAGGCCCACACA
CAATCCCTCCATTCCTCACAGAAAAAGAGG-CAAGAATCCC--CCCCTCCGCCGCCAGCCATGCCGTCGTTCCAAGGCTG
GATAGATCTGCGGCCGGAGCTCCTCTGTCGCGTCGCCGATGGCCTCGACGACCTCAGGTTCTACACCAGCGTGCGCGGCA
CCTGCACGGCGTGGCGTGGCGCGCTCGCGCCGCCTGCACCATCGCTGCTCGTCCTCCTCCGCGACGACGCCACCAGACGT
CGGCACGCCGCCATCGTCTCGCTCCCCGCGCACCGCTCCTTCGGCCTCCAG----GCAATCCCCTCAGGCTCGTCCTGCC
CCAACGCCTCG-CCCCCGATGCGCGGCTCCTTCGAGTTCATGGCCACCTACCCGATTAGGAGCTACCTCGGTTGCGGAGG
CGGGTGGCTTGCCCTCTCCGTCTGCCTCTACGACGGCCAAAGCCTGCTCACCCTCTTCCACCCAGTCACCGCCGCCGAGA
TCCTCCTACCGCCGCTCATCTACGACACCCGCTTGCTCTCCAAGATCGTTTTCGCGCCTGACCCCGCTAGGGAAGACTTC
ATCACGGCCACCATCTGCGACATCGACAGGCTCGCCTACGTCACCGCGGGGGCTAGGAGGTGGGCCGTCCTTGACCGCGT
CCGTCTTGCCACCGGAGACCAGCTCGTCGATGTCATCTACCATCAAATTGGTCAAAATGGTATGGTTTACTGCCTCACTC
GATTTGGGAATGTTTATGTGCTCCGCCTACCAGAACGTCGCCGCCGAGAACCCGTCATCATCGAGGACCAGACATCAGCA
GAGGATCTTGTAACGCATAACAGGCGCATCATTCAAATGCACAATGCCGGATCGGACCTGAATGCGCCGGCTAGCGTGCA
ACCACTACTCTTTTCTT---------------------CGGTGAGCAGTTTCACCCCACTGTA-CGTAGCTGTTTCGGAT
TTCACAAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTATACCAGATCCGGAGGAATGCTAGTTGTACCGTCACTTT
GCATCTGGCGGGAGGCAGTCATCGCCGTATAGAGGAGGATGAAATATTTGTTCTCAAGTATAATCCCCGACGCAGGCCTT
GCTGGGACGCGGTGGCTGACTTGGGGGGATACTCAGTGTTTGTTGGGAGGAGCAATGCGGTGTCAATGCATGCTGAAGGT
GTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTGGGAGAGGTAGGGATCAAGGCATGGTCTTTGACATGGGGAC
CGGGAAATCTACACCTTGCCTTCCCCCTACGGCTGGTGTCGTTCCAGGGCCTCTACAGTGTACAATCTGCTGGTACTTTC
CGAGGAAGGTAGTGAATAACTGC---AATACAAATGAATTAGGTGTTTATGGGACCCGAGCAAGGGTTCGGGCTCAACGT
GCACAAGACATGTCACAATGATGTGTCGCCAAGATAGCTTGGTGACATAGTGAGCACCACCAGCCTGGAAGTGATGTTTA
TCATGCATGACAAGAAATCTTGCAGAGTGTAATTGCTTGTTGTGACCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAA
ACCACTTTTCAACCCAATAGAACTGATGGAAGGATTACATTTGCAGCCAATGGTACAAACAATTTTTGAAGCTTCATTAG
CAGCCAATGAAAGGGAAAAGGATGGTGAGAAGTTTGAGAAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAA
TGTCTTGAGAAGAATACATAATAAGTAATACATGGTATGTTGTGTTGGTTT-AGTTCCCATGCTTGGAT-----------
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---------------------------------------------------------------
>chr3B_359
--------------------------------------------------------------------------------
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------------------------------------------------------CCGGCCATGCCTCCGTTCCGGGGCTG
GACGGACCTGCCGCCGGAGCTCGTCGGCCAGATCGCCGACGGCCTCGACGATCTCAAGTGCTACGCCAGCACGCGGGGAG
CCTGCAGCACATGGCGTCGCGCCCTCCCGCCGCCGGCCCCTTCACTGCTTGTCGACCACGGCGCCGCCGCCATCAAGTGC
CGTA---CCACCGCAACCTCGCTCCCTGCGCATCGCTCCTTCGAGCTCACTTAACGTCATCCCCTCAGGCGGGCTCTGCC
CCGCTGC-------------GCGCCGCTCTTTCCAGCTCGCCAAAATCCCTGCGCCCAGGACCTGCCTCGGCTGCTGCAG
CGGATGGCTCGCTCTCTCCGTCTTCATCGACGACGTCCACAGCCTGCTCAGCCTCTTCCATCCCGTCACCGCCGCCGAGA
TCCTCCTGCCGCCGCTCATCTACAACACCCGCCTCGTCTCCAAGATCGTCTTCGCGCCCAACCCCGCCACCGATGACTTC
GCCGCCACCGCCATATGTGACATCGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGATGGGCCGTCCTCGACCCTGT
CCACCTCGCCGCCGGAGACCAGCTCGTCGACCTCCTCTACCATGG---------AAATGGTATGGTCTACTGTCTCACTC
GGTTTGGAGATGTCCACGTGCTCCGCCTGCCACAGCGTCGCCGTCGGGAACCTATCATCCTCGAGTGCCACACACCAGCA
GATTATCCAGTAGTGCATAACAAGCGGATCTTCCAGATGCATGGAACCGGACCGGACCTAAATGTGCGGGCCACAGACGA
GCCACTGTTGTCATCTGTGGGCAACCCAGTGTTCGACGCCGCCACCTGTTTCACTCAGCCATA-CATCCCGGTCTCGATT
TTTACTAGTGCCAAGAACCTGGTGTTCTGCGAGGGTAACTTGTACCAAATCTGGAGGAATGTGACCTGCACGGTTACTTT
GCAGCTGTCAGGAGAGGGTCGCCGCCGTGTAGTAGAGGATGAAATATTTGTTATGAGGTATGATCCCTGGCGACGGCCAT
GTTGGGACGCCGTGTCCGACCTGGGAGGATACTCCATCTTTGTCGGGAGGAACAATGTGGTTTCGATGCACGCAGAAGGT
GTTCCTGGACTCATGGGTGATTGTGTGTACTGGATAGGCGGAAGGGGTAGAGATCAGGGCATGGTCTTTAACATGAAGAC
TGGGAGATCAACACCTTGCCTTCCCCCCTTAGATGGTGTCGTTCTCGGATCTCCACAAAGCACAATTTGCTGGTACTTTT
TGAGCGACACAGTCAATAATGGCAATAATACGTATGAAAGAGGAGTTTATCGGACCAGGGCAAGGGCCCGGGCT------
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>chr4D_861
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-CCGCCGCCACCATCTGCGACATCGACAGGCTCGCCTACGTCACTGCGGGGGCCAGGAGGTGGGTCGTCCTTGACCGCGT
CCGTCTTGCCATCGGAGACCAGCTCATCGATGTCGTCTACCATCAAAATGGTCAAAATGGTATGGTTTACTGCCTCACTC
GGCTTGGGAATGTCTATGTGCTCCGCCTACCGGAACGCCGCCGTCGGGAACCAGTCATCATCGAGGACCAGACATCAACA
GAGGATCTTGTATCGCGTAACAGGCGCATCATTCGAATGCACAATGCCGGACCGGACCTGAACGCGCCGGCTAGCGTGCA
ACCACTGCTCTTGTCTT---------------------CGGTGAGCAGTTTCGCCCCACTGTA-CGTCGCTGTTTCGGCT
TTCACGAGTGCCAAGAACCTGGTGTTCTGCAATGGCAACCTGTACCAGATCTGGAGGAATGCTAGTTGTACGGTCACTTT
GCATCTGGCGGGAGGCGGTCATCACCGTATAGAGGAGGATGAAATATTTGTTCTCAAGTATGATCCCCGGCGCAGGCCTT
GCTGGGACGCGGTGGCTGACTTGGGGGGATACTCGGTGTTTGTTGGGAGGAGCAATGCGGTGTCGATGCATGCTGAAGGT
GTTCCAGGGCTCAAGGGTAACTGTGTCTACTGGATAGGTGGGCGAGGTAGGGATCAAGGCATGGTCTTTGACATGGGGAC
CGGGAAATCTAGACCTTGCCTCCCCCCTGCGGCTGGTGTCGTTCCGGGGCCTCAACAGTGCACAATCTGCTGGTACTTTC
TGAGGGAGGCAGTGAATAACTGC---AATACAAATGAATTAGGTGTTTATGGGACCCGAGCAAGGGTTCGTGCTCAACGT
GCACAAGCCATGTCACAGTGATGTGTCGCCAAGATAGCTTGGTGACATAGTGAGCACCGCCGGCCTGGAAGTGATGTTTA
TCATGCATGACAAGAAATCTTGCAGAGTGTAATTGCTTGTTGTGTCCAAGCCTGGTGATAAGTGAGGAGGACAAAGACAA
ACCACTTTTCAACCCAATAGAACTGATGGAAGGATTACATTTGCAGCCAATGGTAGAAACAATTTTTGAAGCTTCATTAG
CAGCCAATGAAAGGGAAAAGGATGGTGAGAAGCTTGAGAAGAACAAAAGATTTGTGTGTATTTGTGTCTGAGATGATCAA
TGTCTTGAGAACAATACATAATAAGTAATACATGGTATGTTGTGTTGGTTTTAGTTCCCATGCTTGGATTGTGT------
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>chr3B_863
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---GCCACCGCCATCTGTGACATAGACAGGCTCGCCTACGTCACCGCGGGGGCCAGGAGATGGGCCGTC---GACCCTGT
CCACCTCGCT-TCCGGGACCAGCTCGTCGACCTCCTCTACCACGG---------AAATGGTATGGTCTACTGCGTCACTC
GGTTTGGAGATGTCTACCTACTCCGCCTGCCACAGCGTCGCCGTCGGGAACCTATCATCCTCGAGTGCCACACACCAACA
CATTATCCAGTAGTGCATGACAAGCAGATCTTCCAAATGCATGGAACCGGACCGGACCTAAATGCGCGGGCCACCGTCGA
GCCACTGTTGTCGTCTGTTGGCAACCTAGCGTTCGACGCCGCCACCTGTTTCACTCCGCCATATCATCCTGGTCTCGATT
TTTACTAGTGCCAAGAACCTGGTGTTGTGCGAGGGTAACTTGTACCAAATCTGGAGGAATGCGACCTGCACGGTTACTTT
GCAGCTACCAGGAGGGGGTCGCCGCCGTGTAGCACAGGATGAAATATTTGTTATGAGGTATGATCCCCGGCGCCGGCCAT
GATGGGACGCCGTGGCCGACTTGGGAGGATACTCCATGTTTGTCGGGAGGAACAATGCAGTGTCAATGTATGTAGAAGGT
GCTCCGGGACTCATGGGTGATTGTGTGTACTGGATAGGTGGAACCGGTAGAGATTAGGGCATGGTCTTTGACATGAGGAC
TAGGAGGTCAACACCTTGCATTCCC-------------------------------------------------------
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---------------------------------------------------------------
>chr5A_2104
ATGTG---------------------------------------------------------------------------
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----------------------------------------------------------------------------AAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCATATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCATCTGATCGTTTGGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACATCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATAACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr7A_2107
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTTCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr6A_2107
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAATATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATAAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr3A_2107
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTGGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGTGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr3A_2107
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-------------------------------------------------------------------------TTGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCATCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACAAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr1A_2108
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--------------------------------------------------------------------------TGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTATCAGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACT--
>chr1A_2108
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTAGCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTAAAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGACGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAG
>chr6A_2108
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATG
GTATTAACCGGAAACATAATACATGTGTGAATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGATAACGAGATTGAACTAG
>chr5A_2108
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------TGAAGG
AAATATGCCCTAGAGGCAATAATAAAGTTATTATTTATTTCCTTATATCATGATAAATGTTTATTATTCATGCTAGAATT
GTATTAACCGGAAACATAATACATGTGTGGATACATAGACAAACTTAGTGTCACTAGTATGCCTCTACTTGACTAGCTCG
TTAATCAAAGATGGTTATGTTTCCTAACCATGAACAAGGTGTTGTTATTTGATTAACGAGGTCACATCATTAGTTGAATG
ATCTGATTGACATGACCCATTTCATTAGCTTAGCACCCGATCGTTTAGTATGTTGCTATTGCTTTCTTCATGACTTATAC
ATGTTCCTATGACTATGAGATTATGCAACTCCCGTTTACCGGAGGAACACTTTGTGTGCTACCAAACGTCACAACGTAAC
TGGGTGATTATAAAGGAGCTCTACAGGTGTCTCCAAAGGTAGATGTTGGGTTGGCGTATTTCGAGATTAGGATTTGTCAC
TCCGATTGTCGGAGAGGTATCTCTGGGCCCTCTCGGTAATGCACATCACATAAGCCTTGCAAGCATTGCAGCCAATGAGT
TAGTTGCGAGATGATGTATTACGGAACGAGTAAAGAGACTTGCCGGTAACAAGATTGAACTAG
>SNPs
SS----------------------SS-SS--------S---S---S--------SS--SSS-S--SS-S---S---SS-S
SSSSS----------------------S----------------------SS--------S--------S----------
S------S------S-------SS------------S----------S--S----------S-----S-----S----SS
S---------SS-------------SS------------------------------S--------------------S-
----------------------------------------SSS---------S----------S----------------
---------S---------------SS-----------------------------------------------------
-----------------------------------S------------------------------S-------------
----S---------------------------------------------------------------------------
---------S--------------------------------S-------------------------------------
-------------S-S----------------------------------------------------------------
-S----------------------------------------------------S----------S--------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
------------------------S---------------------S----------------------------S----
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------------------S-------S------------------------------S---------------
--------------------------------------------------------S-----------------------
S-------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
S---------------------------------------S---------------------------------------
------------------S-------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_319
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------GTGAAACCCTAGGCCCACAT-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_1463
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGGGGGATACTCGGTGTTTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_1369
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------ACCGTCACTTT
GCATCTGGT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_2259
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GTACATGTGTGAATACATAGACAAACT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
