>input_sequence_70212
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------------------------------------------ATATATAAGTGCAGCCGTCTCCCCTGCCGATC------
--------------------------CATCCATTG-----------TTCCTCCTACCGAGCTCTCAGCCTCTCACACAAC
TACA----ACAACGCAAAACAAAAGAGCATCAATCAAAATC---CAGC----AGATCATCAAGAGGAGCAGCAA------
-ATTCAGCTCCATGGGAGCAGGGATGAAGCACGCGAGGGAGGAGGAGCCGATTGTTTCGCTGGCGCTGTCCCTCAGCACG
GACTCCTCAG---CG---TCGACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGGCA----
-----------AAGAAGAGGGTGCGACGGGGGAGGGTGGTGGTGACGTCGGGGCAAGGGGAGTTCGTGTGCAAGACATGC
GGCCGCGCCTTTGAGACGTTCCAGGCGCTGGGCGGCC--ACCGGACCAGCCACCTCCGCGGTCGCCACGGGCTGGAGCTC
GGCGTCTGCGTCGCCAGGGCCATCGGGGAGCGGCAAAGGCACGACGACA------AGCAGCAACACGACTGCCACATCTG
CACACTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCGCTCGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---GCCT
ACCGGCTGCCTGTCTTGCTCGAGTTGTTCGTTTAGCCTG-TAGCTGGTTCTCTCGGTTTCTTCATACCAGTA------CA
ATCCAGGACTTGTAACCATAACATGTCTTTTGAATCAGATGGGTTACA--------------------------------
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---------------------------
>chr5D_1_TraesCS5D01G491200
AGCGTGTTTTCGATGATGTAGCTCTAATAATCAATTAGACTAATAAGATTAAGTTGTGTAACTTA--AAAGTTAAGCCAT
GAAATG-----------GAAGAAAGCCAGCATCATTCCATATGTCATGACCACAGTTGAGCTAACATTTCTCTCTCGATA
GAAATATAGAGAAGGTAGCAAATTCGCATAAAC-----GCACGCACGCACGCACGCACAGACGCACAGTATCGTAATGCT
GCAAAAAAG------------AAGTTTGAAATATCCTGCTCGGTCAAAGATTGTTTCCCAGTGCCTGGAAAGTTCCAGAC
GCTTCCTCACGCTT------GCGCCGCCGGCCAACTCAGATGATGTAGCTCTAATAATCAATTATTCGCTCCGGTTAATG
GATGAGCCGCTGAATCCCGCCCAACGTCC--------CGGCGGCCAAGCAGCGGCGCGCCGCCACGCGTCTTGTGGC-TG
ACAGGTGACGCCCC-------TCCGCACCACACGTT-CGTCTCCGGTCGGCC-GCGCTAGCGCTACGCACACGCACGACT
G-AAATATCCAATCGAGCTATCTGCCAAAATAATACTACTTGTCGCCGG-------------TCCGTCACGTCGG-GAAC
GTCGTGGTGGCTTCCGACGATTGGTCCGCGGACGCCAGAGGTAGGCCAAGTG-------------GGCACACACGTAACC
TCCCCCGGCAGCAACACGCATGCCACCGACACGGCCGGCAAAAACCATAAATTTGACCTTAGGGCGAAACTATTTCACAA
ATTAAACTATGTTTAAAAGTATTTCACTCAGCTGACCCCTAATGTGCAGCGCCTAACAGTAAGGCGCTAGACTCTACTGT
GCAGCGCCTAACACAGGCGCCACACTGTAAGGAGCTGCACTACACTGAGCAGTGCCTAACTGTAAGGAGTTGCACAGTAG
AGTGCAGTCCTTACTGTTGGGAGCTGCATAAAAGGGTCAGCGGTGTGAATATTTTAAAAACAGTTTAATTTATGAAATAC
TTTCGCTTTGAAGTTAATTTGTCAATTCTGCCAACACGGCCTATATATAAGTGCAGCCGTCTCCCCTGCCGATC------
--------------------------CATCCATTG-----------TTCCTCCTACCGAGCTCTCAGCCTCTCACACAAC
TACA----ACAACGCAAAACAAAAGAGCATCAATCAAAATC---CAGC----AGATCATCAAGAGGAGCAGCAA------
-ATTCAGCTCCATGGGAGCAGGGATGAAGCACGCGAGGGAGGAGGAGCCGATTGTTTCGCTGGCGCTGTCCCTCAGCACG
GACTCCTCAG---CG---TCGACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGGCA----
-----------AAGAAGAGGGTGCGACGGGGGAGGGTGGTGGTGACGTCGGGGCAAGGGGAGTTCGTGTGCAAGACATGC
GGCCGCGCCTTTGAGACGTTCCAGGCGCTGGGCGGCC--ACCGGACCAGCCACCTCCGCGGTCGCCACGGGCTGGAGCTC
GGCGTCTGCGTCGCCAGGGCCATCGGGGAGCGGCAAAGGCACGACGACA------AGCAGCAACACGACTGCCACATCTG
CACACTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCGCTCGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---GCCT
ACCGGCTGCCTGTCTTGCTCGAGTTGTTCGTTTAGCCTG-TAGCTGGTTCTCTCGGTTTCTTCATACCAGTA------CA
ATCCAGGACTTGTAACCATAACATGTCTTTTGAATCAGATGGGTTACA----------------ATAGAGTACGTTATGC
AGCTGGCTAGCATTTCCCTTCATGGAAT---TTTTGCACTGGATCGGTTCGTTTTCTTAATCGATCAACTGGG-ATTTAC
ATACACTT-GTGCTTAGTTA--AGACAA---CTTATTTTGTGCTAAATGCAATTGGCAGATTCTTGCACTCAGATTGGTT
GTCTATGAATATGCTGTTGTTCACCGCCATTGTA----------------------------------------------
--------------------------------------------------------TTTGCTCACCCGAGTTGAGGACGA
GGGCGTGGATCCTTGATTTGCAGAGTGGCGTCGGAACCAAGGGAATGTCGAGGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CGTATCCCCTTCTTCCTCGACGGTCTTGCTTCCTCGTCATCCTCTAGCTAGCACA
ATGGACATCTCCTGCATCGGCCGCGATGCCAATGCCATCACCACTGCCACTGCATCCTCCTCCGAGTCAGGGGTTGCCAG
ACCACGAGATAGGTAATATCGCCCACTTTCGCCACTCGACTGGATCCACTGATTTCGTCTCCTCCATAGCCTGAAGCACG
ATTTCTTTCGGATACTTCCACTGGTAGAAAAAAGCCCTTTAGTCCCGGTTCGCAACAGCCTTTAGTCCCGACTGTGCAAC
CGGGACTAAATATGCGCGACTAAAGACCCCCCTTTAGTCGCGCCTCTTACGGACCGCGACTAAAGGCTTTAGTCCCGGTT
CTTGTGGCTGACCGGGACTAAAGGCCCGTCCACGTGGGCGCCAGTGGTCCGTCGGGGCGGAGGACCTTTAGTCCCGGTTC
TCGTGGCCAACCGGGACTAAAGGCCTCCTCCGCAGGTTTAGGGTTTTAGCCCCCCTAAACCTGGTTTCTTTTTAGTTTGG
AGTGTTTTATTTTTTTTATATTTTATTTTGTGTTTTATTTTAATTTTGATGGAGTTTCAGTACACATATCCTACGCTACT
ATATACATGCATATAAAATTTCAAACAAGAAGAATTCAAGAGGAATATATAATATATATTCAATCTCGGGTGACCATATA
CAACTTCGAACAAATTTTCATACACAA
>chrUn_2
-GCATGTTTTCCATGATTTAACTCTAATCGTCAAATAGACTAATAACATTAAGTTGTATAACAACTTAAAGTTATGCCAT
GAAAGCCTCTTTCGATAGAAGAAAGCCAGCATCATTCCATGTGTCATGACC---------CTAACATTTTTCTGTCGATA
GAAATATAGAGAAGGTAGTAAACTCGCATACTTGTGAAGCACGCACGCACGTACGCACAGACGCGCAGTGTCGTCATTCT
GTAAAAAAGAAGTACCTTCACAAGTCTGAAATATCCTGCTCGGTCAAAGATCCTTTCCCAGGCTCTGGAATGTTCCAGAT
CCTTCCTCACGCTCACAATCGCGCCGCCGGCCAGCCCGGACTA----------------AATTATTCGCTCCGGTTAATG
GATGAACCGCTGAATCCCGCCCACCGTCC--------CGGCGGCCAAGCAGCGGCGCGCCGCCACGCGTCTTGTGGCGTG
ACAGGTGACGCCAA-------TCCGCACCACACATT-TGTCTCCGGTCGGCC-GCGCT------------ACGCACGACT
G-AAATATCCAATCA--------------------------------------------------GTCACGTCGC-GAAC
GTCGTGGTGGCTTCCGACGATTGGTCCGCAGACGCA---------CCAAGTG-------------GGCACACACGTAAGG
TCCCCCGGCAGCAACACGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ATGCCAGCTACACAGCCTATATATAAGCGCGGCCGTCTCCCCTGCCGATT------
--------------------------CATCCAT-------CCATTCATTCTCCTACCGAACTCTCAGCCTCTCACACAAC
TACA----ACGC-----CGCAAAAGAGCATCAATCAAAATC---CAGC----AGATCATCAAGAGGAGCAGCAA------
-ATCCATCTCCATGGGAGCAGGGATGAAGCGCGCGAGGGAGGAGGAGCCAACCGTCTCGCTGGCGCTGTCCCTCAGCACA
GACTCCTCGG---CG---TCGACCA-CGACGTCGGACGACTCG---GGCACCGGTGCG------CCTACGCCG-------
--GCGGCGCCCGGGAAGAGGACAAGGCGGAGGAGAGTAGTGGCGACGTCAGGGGAAGGGGACTTCGTCTGCAAGACTTGC
GGCCGGGCCTTCGAGACGTTCCAGGCGCTGGGCGGCC--ACCGGACCAGCCACCTCCGCGGCCGCCACGGGCTGGAGCTC
GGCGTCGGCGTTGCCAGGGCCATCAAGGAGCGGCAAAGGCGCGAGGACA------GGCAGCAGCACGACTGCCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------CAGGCGCTCGGCGGCCACATGCGTCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
ACCGGCTGCCTGTCTTGCTCGAGCTGTTCGTCTAGTTGGCTAGGTGGATATCTCTGTTTCTTACTAC-AGTA------TA
ATCCAGGACTTGTA-------CATGTCTTTTGAATCAGGTAGGTTACG----------------ATAGAATATGTTATT-
-GCTGGTTAGCATTTCCGCTCGTGGGAT---TTT-GCTCGGAATCGGTTCGTTTTCTTAACCGATCGACTGGGGATTTAG
ATACACTTTGTGCTTACATT--AGACAAAAAATTGTTTTGTTCTATATGCAATTGACAGATTCTTGCACTCAGATAATTT
TTCTATGAATATGTTGTTGTTCACCGCCATTGTCTATGATAACAAGTCTAATTTGGAGCCTAAATTTGTAAATTTTTGCA
ATATAAGCTACCTTCACAACTTAACATCGTCTCAACGTTGATGGTACATTGATTCGTTTGCTCGCCTGAGTTGAGGATGA
GGGC---------------GCAGAGTGACGTGGGAACTAAGGGGAATGTGGAGGTAGTCCTCGCCATGGGCAGCCCGGCC
CGACCTTGTCCACGGGTCGGGCCTAGGCCTAGATTTTCAGCCCGATGGTCGGGCCCGGGCCTGTCATATTCACAGTTTAA
GGAAGAGGACCGTCCTGAGGCCCGACGGGCTTTTTGCGTGATGGGTCGGGCTTGGGCCTGATTTTTTGGCCCGACGGCTG
GGCGTGGGCCCAGGATTTTTGCGTCGGGCTTTGGTAGGCTCGGCCCGAGGCCCGACCCGGCCCGACAAATGGCTAGGTAT
ATGTCGAGGCAGTTGCGTGATCTCCCGTATCCCCTTCTTGCTCCTCGGCCTTGCTTCCTCGTCGTCCTCC----AGCACA
ATGGACATCTCCCGCATCCCTCGCGATGCCAATGCCATCACCACTGCCACCGCATCCTCCTTTGAGCCATGGCGTGCCCG
ACGACGAGATCTGT-ATATTGCCCACTTCTGCCGCTGGACTGGGTCCATTGATTCCGTTTCCTCCATAGCCTGAAGCACG
ATTTCTATCGAGTACTT---------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5D_359
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--------------------------------------------------------------------------TTAATG
GATCAATCTGCGATTCCGGCC-ACCGCCC--------ACGCGGGCAAGAAGCGGCGCGCCGCCACGCGCCTTTTGGCGTG
CCAGGTGACGCCACTCCGCGGTCCGCACCACACGTT-CCCCTCCGGTCGACCCGCGCT------------ACGTACGAAG
GAAAATATCCAATCGAGCTATCTGCCAAAACAATATAATATCCGAGCTCTAGCTCTATCCCATCCGTCACGTGAAAGAAC
GTCGCCGTGGCCTCCGACGATTGGTGCACAGACGCCAGAGGTCGGCCAGCCCCCA---CCAACTTGGCACACACGTATGC
TCCCCCGGAAGCACCACGCACGCCACCGCCTC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CTGCCCACACAACCTATATATAACTGCGGCCGCCCATGAGAGCATCAATCCAT
TCTCGCAGACCAACTACACAACAGAGCATCAAT-------CCATTCTTCTTCCTGG------------TACCGAGTTCTC
-ACA----GACCAACAGCACAACAGAGCATCGATCGAATTC---CACACGCGAGATCAGGAAGACGAGCAGCAA------
-C------TACATGGGAGCGGGCATGAAGCGCGCGAGGGAGGAGGAGCCAGTTGTGTCGCTGGCGCTGTCGCTCAGGACA
GACTCCTCGGTGACG---TCCACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGCTGGTC-
--------CCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGGGAGTTCGTGTGCAAGACTTGC
GGGCGTGCCTTCGAGACGTTCCAGGCGCTCGGCGGGC--ACCGGACCAGCCACCTGCGCGGCCGCCATGGGCTGGAGCTC
GGCGTCGGCGTCGCCAGGGCCATCAAGCAGCGGAAGCGGCAGGAGGAAA------AGC---AGCACGACTGCCACATCTG
CGGGCTGGGCTTCGAGACGGGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------CATGCGCTGGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCAC----
--------TCAGCGACGCCATGGACCGGTGGGTCGCGCTGTCGGATCAAGAGGCTGGGCACCAGCACGCCGCC---G---
ACCGGCCGCCAGTCTTGCTCGAGCTGTT----------------------------------------------------
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>chr5A_360
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------TAATG
GATGAGCCGCTGAATCCCGCCCATCGTCCCGGGCTCCCGGCGGCCAAGCAGCGGCGCGCCGCCACGCGTCTTGTGGCGTG
ACAGGTGACGCCACTCT-------GCACCACACGTTTTGTCTCCGGTCGGCC-GCGCT------------ACGCACGACT
G-AAATATCCATTCGAGCTATCTGCCAAAATAATATAT----------------------CATCCGTCACGTCGC-GAAC
GTCGTGGTGGCTTCCGACGATTGGCCCGCAGACGCCAGAGGTAGGCCAAGCCGGATCCCCAACCTGGAGCACACGTAAGC
TCCACCGGCAGCAACACGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ATGGCAGCTACACGGCCTGTATATAAGTGCGGCCGTCTCCCCTGCCGACC------
--------------------------CATCCAT-------CCATTCTTCCTCCTACCGCGCA--------CTCACAGAAC
TACA----CCAACGCAAAAGAAAAGAGCCGTAATCCAAATC---CAGC----AGATCATTAAGAGGAGCAGCAA------
-ATCCATCTCCATGGGAGCGGGGATGAAGCGCGCGAGGGAGGAGCAGCCAATTGTGTCGCTGGCGCTCTCCCTCAGCACA
GACTCTTCGA---CGACGTCCGCCA-CCACGTCGGGCAACTCG---C---TCGGTTCGCCGCCGC---CGGCGG------
---------CAAGGAAGAGGGCGCGGCGGGGAAGAGTGGTGGCCACGTCAGGGGAAGGGGACTTCGTCTGCAAGACTTGC
GGGCGCGCCTTCGAGACGTTCCAGGCCCTGGGTGGGC--ACCGGACCAGCCACCTCCGGGGCCGCCACGGGCTGGAGCTC
GGCGTCGGCGTCGCCATGGCCATCAAGGAGCGGAAGAGGCAAGAGGACA------AGCAGCAGCACGACTGCCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------CAGGCGCTCGGCGGCCACATGCGGCGGCACCGCGAGGATATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
GCAGGCTGCCTGTCTTGCTCGAGCTGTTCGTCTAGCCTGCTACCTGGATCTCTCAGTTTCTTACTAC-AGTAGTATAACA
ATCCAGGAATTGTA-------CATGTCGTTTGAATAAGATAGGTTACG----------------ATAGAGTACGTTACT-
-GCTGGTTAGCATTTCCGCTCGTGGAAT---TTT-GCTCTGAATCGGTTCGCTTTCTTAACCGTTCGACTGGGGATTTAG
ATACACTT-GTGCTTAGATT--AGACAA---ATTGTTTTGTTCTAAATGCAATTGACAGATTCTTGCACTCAGATTGTTT
TTCTATGAATACGTTGTTGTTCACTGCAATTCTA----------------------------------------------
--------------------------------------------------------T-----------------------
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>chr5B_983
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------------------------ATTCCACCAACAGAGCCTATATATAAGTGCGGCCGTCCTCCCTGCCGACC------
--------------------------CATCCAT-------CCTTCCTTCCTCCTATCGAGCTCTCATCCTCTCACACAAC
TACA----GCAACGC---------------------AAATC---CAGC----AGATCATCAAGAGGAGTCGCAA------
-A------TCCATGGGAGCGGGGATGAAGCGCGCGAGGGAGGAGGAGCCAGCTGTGTCGCTGGCGCTGTCTCTCAGCACG
GACTCCTCGG---CG---TCGACTA-CGACGTCGGACAACTCG---G---CCTGTGCG------C---CGGCGGCAGCGG
CCGCAGCGCCAAGGAAGAGGGCACGGGGGGGGAGGGTGGTGGTCACTTCGGGGGAGGGAGAGTTCGTCTGCAAGACTTGC
GGCCGGGCCTTCGCGACGTTTCAGGCGCTGGGCGGGC--ACCGGACGAGCCACCTCCGCGGCCGCCACGGGCTGGAGCTC
GGCGTCGGCGTCGCCAGGGCCATCAGGGAGCGGCAAAGGCGCGGGGACA------AGGAGCCGCACGATTGCCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------CAGGCGCTCGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGTTCGCGGTGTCAGATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
ACCGGCTGCCTGTCTTGCTCGAGCTGTTCGTCTAGCCTGCTAGCTGGATCTC----------------------------
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>chr5D_992
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---------------------------------ACACAGCCTATATATAAGTGCGCCCGTCTCCCCTGCCGACC------
--------------------------CATCT---ATCCATCCATTCTTC------------------CTTCTCCAGACAC
AACT----CCACAACAGCACAAAAAAGCTTCGATCACAGACGAGCAGC----AAATCATTTAGACGAGTAGCGA------
-A------TCCATGGGAGAGGGGATGAAGCGCGCAAGGGAGAAGGAGCCAGCAGCGTCGCTGGCGCTGTCTCTCATCACA
GACTCATCGA---CG---TCCACCA-CAACCTCGGCCGACTCG---G---CCGGTGCG------C---CGGCG-------
--GCAGCGCCCAGGAAGAGGGCACGGCGAGGGAGGGTAGTGGCCACTTCGGGGGAGGGAGAGTTCGTCTGCAAGACTTGC
GGGCGCGCCTTCGAGACGTTCCAGGCGCTCGGCGGCC--ACCGGACCAGCCACCTCCGCGGCCGCTGCGGGCTGGAGCTC
GGCGTCGGCGTCGCCAGGGCCATCGGGGAGCGGCAAAGGCACGACGACA------AGCAGCAGCACGACTGCCAGATCTG
CACACTGGGCTTCGAGACAGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCGCTCGGCGGGCACATGCGGCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
ACCGGCTGCCTGTTTTGCTCGAGCTGTTCGTCTAGCCTGCTAGCTGGATCTC----------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5A_1001
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------------------------------------------ATATATAAGTGCGGCCGTCAGCCCTGTCGATC------
--------------------------CATCCATGATCCATCCATTCTTC------------------CTACTGAGTTCTC
-ACAAGAACTACAACAACACGAGAGAGCATCAATCTAAATC---AACAG--------ATCAAGACAAGCAGCGA------
-A------TCCATGGGAGCGGGGATGAAGCGCGCCAGGGAGGAGC---CAGTTGTGTCGCTGGCGCTGTCCCTCAGCACA
GAGTCATCGA---CGACATCCACCG-CGACGTCGGACAACTCG---A---CCGGTGCA------C---CGGCGA------
---------CAAGGAAGAGGGTGCGGCGGGGGAGGGTGGTGGTGGCGTCGGGGCAGAGGGAGTTCGTGTGCAAGACATGT
GGCCGGGTGTTCGAGACGTTCCAGGCGCTGGGCGGGC--ACCGGACAAGCCACCTCTGTGGCCGCCACGGGCTGGAGCTC
GGCGTCGCCGTCGCCAGGGCCATCAGGGAGCAGCAAAGGCGCGAGGACA------AGCAGCAACACGATTGCCACATCCG
CGGGCTGGGCTTCGAGACAGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------CAGGCTCTCGGCGGCCACATGCGGTGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCACGCTGTCGGATCAAGAGGCGGGGCACCAGACCGCCGCC---G---
ACCGGCTGCCGGTCTTGTTCGAGCTATTCGTCTAGTCTGCTAGTTGG---------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5A_1060
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----------------------------------------------------------------CAGCCTCTCGCGGAAC
TACA----GCAACGCAAAAGAAAAGAGCATCAACCAAAATC---CAGC----AGATCATCAAGAGGAGCAGCAA------
-ATTCATCTCCATGGGAGCGGGGATGAAGCGCGCGAGGGAGGAGGAGCCGATTGTTTCGCTGGCGCTGTCCCTGAGCACG
GACTCCTCGG---TG---TCGACCA-CGAC-TCGGACGACTCTGGCA---CCGGTGCG------C---CGGCG-------
--G------CAAAGAAGAGGACACGGCGGGGGAGGGTGGTGGCGATGTCGGGGGAGGGGGAGTTCGTCTGCAAGACGTGC
GGCCGGGCCTTCGAGACGTTCCAGGCGCTGGGCGGGCGCACCGGACCACCCACCACCGGGGTCGGCACGGGCTGGAGCTC
GGCGTCGGCGCCGCCAGGGCCATCCGGGAGTGGCAAAGGCGCGAGGACAGGCACAGGCAGCAGCACGACTGGCACATCTG
CGGGCTGGGCTTCGAGACGGGCCCATAGTTGCCATGTTTCCGGTACGGTGGGAACGAGGAACGGGAACGAGGGACGAGAG
TCGGTGATTGAAAAAAATAGGGTACAACGAGGGTATACATCTCTCGAACGATTTTTTTATAGCAGGGACGCGATCCAATT
CGTTTGGGTACGATGAACCCGGTACGGTACCATGGGTCGAGGAACGCAGTTCCTGAAGAACGACGACTCCTTGACGGTCA
GCATTCCTTGATGTTAATGGATCACTTGCAATTAATGGACTGGAGGAAGAAAGAGGAGTCCTTGAGAAAATGAACGACAG
CGTGAGTAAATTATGCCTCGCGTTTTGGCTGTTGGATCCTCGAACCTGAATCGAGGAGCAGGCTGTGGGGACGCCGAATC
TCCATTGAATCGTACCGAATCCGACCTCGTTCCCGAATCCGATTCTGGGACAATGAATCGGGATCGAGGGACGGCCTACC
GTTCCCTGTTTCCGGCTACTATGGACGGGCCAGGCTCTCGGCGGCCACATGCGTCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
ACCAGCTACCTGTCTTGCTCGAGCTGTTCGTCTGGCCTGCTAGTTGGATCTCAATGCTTGTTAGTTC-AGGACTTGT---
---------TTCTA-------CATGTGTTTAGAATCAGATAGGTTCATTATTGTTCAACGTTGTATTGAGTACG-TTTT-
-GCTGGTTAGCGTTCCCGTTCTTGCTGCATATTT-GCTTTGGATCGGTACCTTTTTTTAACCGATGGACGAGAGGTTTAC
ATACACTT-GTAGTATAAATGAAGACAC---ATTCGTTTGCTCTCAATGCAATTGACGGATTCTTGCACTCAGATTGGTC
TTCCATGAATATGCTGTTGTTCACCGCCATGGTT----------------------------------------------
--------------------------------------------------------TTT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5A_1110
--------------------------------------------------------------------------------
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--------------------------------------ATC---CATC----AGATCATTAAGACGAGCAGCAA------
-A------TCCATGGGAGCGGGGATGAAGCGCGCGAGGGAGGAGGAGCCAGCTGTGTCGCTGGCGCTCTCTCTCAGCACA
GACTCCTCGA---CG---TCCACCA-CCACCTCGGCCGACTCG---A---CCGGTGCG------C---CGGCGAAGGCGG
CCG------CAAGGAAGAGGGCACGGCGGGGGAGGGTGGTGGCCACTTCGGGGGAGGGAGAGTTCGTCTGCAAGACTTGC
GGCCGGGCCTTCGAGACGTTCCAGGGGCTGGGCGGGC--ACCGGACCAGCCACCTCCGTGGCCGCCACGGGCTGGAGCTC
GGCGTAGGCGTCGCCAGGGCCATCACGGAGCAGAAAAGGCAAGAGGAAA------AGCAGCAGCACGACTGGCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCGCTCGGCGGCCACATGCGGCGGCACCGCGAGGAGATGGCGC----
--------TC------------GACCGGTGGGTCGCGCTGTCGAATCAGGAGGCGGGGCACCAGGCCCCCGCC---G---
ACCGGCTACCGGTCTTGCTTGAGCTGTTCGTCTAGCCTGCTAGCTGGATCTC----------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5B_1111
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------TC---CAGC----AGATCATTTACACGAGCAGCAGCAAATC
CA------TCCATGGGAGCGGGAATGAAGCGCGCTAGGGAGCAGGAGGTAC---TGTCGCTCGCGCTGTCGCTGAGCACG
GACTCGACGT---CG---TCGTCAGCCGAC-TCGGCCGGTGCAC---------------------------CGG------
---------CCAGGAAGAGGGCGCGGCGGGGTAGAGTGGTGGCGACGTCGGGGGAAGGGGAGTTCGTGTGCAAGACGTGC
GGCCGCGCCTTCGCGTCGTTCCAGGCGCTGGGCGGCC--ACCGGACCAGCCACCTCCGGGGGCGCCATGGGCTGGAGCTC
GGTGTCGGGATCGCCAGGGCCATCAAGGAGAGGCAAAAGCAGGAGGACA------AGCAGCAGCACGATTGCCACATCTG
CGGGCTCGGCTTCGGGACCGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCTCTCGGCGGCCACATGCGTCGGCACCGCGAGGAGATGGCGCTCAG
CGGCGCCATC------------GACCGGTGGGTCGCTCTGTCGAATCAGGAGGCGGGGCACCAGGCCGCCGCC---G---
ACCGGCCGCCGGTCTTGCTCGAGCTGTTCGTCTAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------
>chr5D_1146
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------TCCATGGGAGTGGGCATGAAGCGCGCGAGGGAGGAGGAGCCAGTTGTGTCGCTGGCGCTGTCGCTCAGCACA
GACTCCTCGG---CGACGTCCACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGATGGTC-
--------CCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGAGAGTTCGTGTGCAAGACTTGC
GGCCGGGCGTTCGAGACATTCCGGGCGCTGGGCGGGC--ACCGGACCAGTCACCTGCGCGGCCGCCATGGGCTAGAGCTC
GGCGTCGGCGTCGCCAGGGTCATCAAGGAGCGGAAAAGGCAAGAGGATA------AGCAGCGGCACGACTGTCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CAGGCGCTGGGCGGCCACATGCGGCGGCACCGCGAGGAGATGGCACTCAG
CGGCTCCGTC------------GACCGGTGGGTCGCTCTGTCGGATCAGGAGGCGGGACACCAGGCCGCCGTC---G---
ACAGGCCGCCCGTCTTGCTGCAGCTGTTCGTCTAGCCTGCTAGCTGGATCTCTCAGTTTCTTAATCCAG-----------
--------------------------------------------------------------------------------
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---------------------------
>chr5B_1146
--------------------------------------------------------------------------------
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--------TCCATGGGAGTGGGCATGAAGCGCGCGAGGGAGGAGGAGCGGGTTGTGTCGCTGGCGCTGTCGCTCAGCACA
GACTCCTCGG---CGACGTCCACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGATGGTC-
--------CCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGAGGGGGAGTTTGTGTGCAAGACTTGC
GGGCGTGCCTTCGAGACGTTCCAGGCGCTGGGCGGGC--ACCGGACCAGCCACCTCCGCGGCCGCCATGGGCTGGAGCTC
GGCGTCGGCGTCGCCAGGGCCATCAAGCAGCGGAAGCGGCAGGAGGACA---------AGCAGCACGACTGCCACATCTG
CGGGCTGGGCTTCGAGACGGGC----------------------------------------------------------
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------------------------------CAGGCGCTGGGCGGGCACATGCGGCGGCACCGCGAGGAGATGTCACTCAG
CGGCGCCATG------------GACCGGTGGGTCGCGCTGTCGGATCAAGAGGCTGGGCACCAGCACGCCGCCGTGG---
ACCGGCCGCCAGTCTTGCTCGAGCTTTTTGTCTAGTTAGCTAGCTGGATCT-----------------------------
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>chr5D_1147
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---------CCATGGGAGCGGGCATGAAGCGCGCGAGGGAGGAGGCGCAATTTGTGTCCCTCGCGCTGTCGCTCAGCACA
GATTCCTCGG---CAACGTCCACCA-CGACGTCGGACAGCTCG---A---CCGGTGCG------C---CGGCGATGGTC-
--------CCCAGGAAGAGGGCGCGGCGGGGGAGAGCTGTGGCCACGTCCGGGGCGGGAGAGTTCGTGTGCAAGACTTGC
GGCCGGGCGTTCGAGACATTCCAGGCGCTGGGCGGGC--ACCGGACCAGTCACCGGCGCGGCCGCCATGGGCTAGAGCTC
GGCGTCGGCGTCGCCAGGGTCATCAAGGAGCGGAAAAGGCAAGAGGATA------GGCAGCGGCACGACTGTCACATCTG
CGGGCTTGGCTTCGAGACGGGC----------------------------------------------------------
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------------------------------CAGGCGCTGGGCGGCCACATGCGGCGGCACCGCGAGGAGATGGCACTCAG
CGGCTCCGTC------------GACCGGTGGGTCGCTCTGTCGGATCAGGAGGCGGGGCACCAGGCCGCCGTC---G---
ACAGGCCGCCCGTCTTGCTGCAGCTGTTCGTCTAGCCTGCTAGCTGGATCTCTCAGTTTCTTAATCCAG-----------
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>SNPs
S--S-------S-----S--S-------SS----S-----------S----------S----SSS---------S-----
----SS----------------------------------S----------SSSSSSSSS---------S---S------
------------------S---S-------SSS------------------S------------S----S----S--S--
-S-----------------------S-------------------------SS--------SSS------S--------S
S------------S-------------------S-S-S--SS-SSSSSSSSSSSSSSSS---------------------
-----------------------S--------------------------------------------------------
------------S---------------------------------------------SSSSSSSSSSSS----------
-----------------------------------SS-SS-SSSSS-SS-------------------------S-----
-----------------------------S------------------------------------------------S-
--------------------S-------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS------------------------------S-------------------------
---------------------------------SS---------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------S-------------------------------------------------
--------S-----------------------------------------------------------------------
-------------------------S------------------------------------------------------
-----------S--------------------------------------------------------------------
------S-------------------------------------------------------------------------
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-----------------------------------------------------------------------------SSS
-----------------------S-------S---------------S------S-------S----S------------
--------------SSSSSSS-------------------S------S------------------------------SS
S-----S----------S---S------------S--S----------------------S-----S-------------
-----------------S-S-----------S--S------S-------------S------------------------
S-------------------------------------------------------------------------------
---------------------------------------------------------------S--S----------S--
----SSSSSSSSSSSSSSS--------S---S-----S-----S-SSSS-SS-S--------------------------
--------------------------------------------------------------------------------
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---------------------------------------S---SS---S--------------S-----SSSSS------
------------S-----SSS-----------------------------S----------SS---S--S--SS----S-
--S-------SS--S----S--------SS---S--S------S----S-----S---S---------------------
------S---SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_862
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------------------------------------------TGTGCAGCGCCTAACAGTAA------------------
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>reverse_2846
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---------------------------------------------TGTCGAGGTCGTATCCCCTT---------------
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---------------------------
