>input_sequence_70178
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----------------------------------------ATGTACGCGTGTGATTCCGACGGGCAGCCTCTGGTGGAGG
TGTTCTCCGTCCGCGTCCACGGCGGTGAAGCCCTCACCGGCACCGTCAGCGTCTTCGACGGCAAGCGCGGGCAGATCATC
TACAACAACACCCCGGAGCATCCCCACAAACCAGCTGCTTCTTCCCGCCACCGGAGTTCCGGCAAGCTCCCGCTGACGGG
CCCCTACCGAGCCATCTCTGCAGACGGGTGCGTCGCCATCGTGCTCGACCTCCAAGGTCGCTGCCAGAACAAGGCAGCAC
CGTCGCCGTCTTCTTCTTCATCGTCGTACGTGTCTGAGATACTAGTGGACGTCTACGACGAGAACACAAGGTACGACGAG
GCCATCACCCATGACGACGGCTTCGTACAGGTGAGGTACGCGCTGCTGAGCGACGCCGTGGAAGCCATCGTCGAGGTGAA
GCTCCTCCGGCCACGAGCCAGCGGCACGGTCCGCGGGACGGTCGTCGCTCGCACTGTCCTAGGCGAGGTGGTGCTCTTCG
ACGTCGGCGAGACCACCACGAGCAT------------------CGGCACCCTCCCGCTCGCCAGGTCGGTCGTCGCCGTC
CAGCTGACGTCGTTGCTAACGATCGAAGTAGATCTGCGTCTCGATGGCGATGAGACCGTGAGTGGATCTGTTGCGTGCCA
ACCCAAACCCGGTACCAAGGAAGTTCGTGGCCTCGCTGGTGGTGAGGTGGAGGTGACCGTGACATGGTTAGACTAG----
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>chr1B_1_TraesCS1B01G008100
AAGAACCAAGGTAATAGCGAGACCATAATTTAATTAATATCCAAGCTCCTAATCAAAAAAAAAATGTCCTCCAAAAGACT
GAGCCGGCATATCGTCTTGAGATTTTACGAAGTCACGTAGACGCCTCGTAGTCGACGGAAACGTCTTCTCCCGCTGAACG
CGATTACCGAAAATTCTGAAATAAATCTAGGATAAATGCTAGCACCAGAACTTGAACCCTGGTGGACCGGAGATACCAAT
GTCCTCCTAACCATCCAACCACAGCTTGGTTCGCGATCATTGTCGTTTTACGTGCTGGGGCTGCCATATGTTTGACGATG
ATGTCTTGGTGCCTTGTTCGGAACTTCACACTTGTAAATTAACAACTTGTTTTGTGGTTTGGTTATTCAAAATCATGTCG
TAAGCCATGACAACATCATCTAGCAACTTGGACTTGTGATGCTCACAAGTTATCGGTTGGGCATGCCGTATCAGGTCACT
CTTATTTGTTTTGTCTTAACTGTTACTAGTATCATTTCTAGGCAATATGTTAGCTAAGCCGTCCCTCTAAACTTTTTTTT
TAAATACTATACATGGCAAACACTCATATGTACATACATACATACAATCATCGGTTTTGCTAGAAACCGACATATCATTT
TGAGATTGATAAAGTCACCGACGGGAACGTCTGCTCGTACTGAACGCACACTGTCAATAGGTCTGATATAAATTCTGAAA
AATTCGAGCACCGGTGTAAGTCTATGACTTGAACTCTGATGGTCAGGGATATCATTCTCCTTATAATTATCTAACCACAT
GTTGGTTCGCCAGTCACTCCCAACTTGGTTGATAATAACTAGGTTCGTAATTATATATACATCAGTAGTTTAGATAGATG
TATATTAACTTGGCAAACAAGGGGAGTTCTAATATATATTTGGGTCGCTGTTCTCCCCTTGTTAATATACATCTAACCAA
GAAGCTTTCAGGAACAAGTAGCGGATGCTCAGGCTATCATATGTACGCGTGTGATTCCGACGGGCAGCCTCTGGTGGAGG
TGTTCTCCGTCCGCGTCCACGGCGGTGAAGCCCTCACCGGCACCGTCAGCGTCTTCGACGGCAAGCGCGGGCAGATCATC
TACAACAACACCCCGGAGCATCCCCACAAACCAGCTGCTTCTTCCCGCCACCGGAGTTCCGGCAAGCTCCCGCTGACGGG
CCCCTACCGAGCCATCTCTGCAGACGGGTGCGTCGCCATCGTGCTCGACCTCCAAGGTCGCTGCCAGAACAAGGCAGCAC
CGTCGCCGTCTTCTTCTTCATCGTCGTACGTGTCTGAGATACTAGTGGACGTCTACGACGAGAACACAAGGTACGACGAG
GCCATCACCCATGACGACGGCTTCGTACAGGTGAGGTACGCGCTGCTGAGCGACGCCGTGGAAGCCATCGTCGAGGTGAA
GCTCCTCCGGCCACGAGCCAGCGGCACGGTCCGCGGGACGGTCGTCGCTCGCACTGTCCTAGGCGAGGTGGTGCTCTTCG
ACGTCGGCGAGACCACCACGAGCAT------------------CGGCACCCTCCCGCTCGCCAGGTCGGTCGTCGCCGTC
CAGCTGACGTCGTTGCTAACGATCGAAGTAGATCTGCGTCTCGATGGCGATGAGACCGTGAGTGGATCTGTTGCGTGCCA
ACCCAAACCCGGTACCAAGGAAGTTCGTGGCCTCGCTGGTGGTGAGGTGGAGGTGACCGTGACATGGTTAGACTAGTCGC
TCCATCCATCCTCTTGCGTTGAATTCCTGTCGAAAGTATATACAAATTGCGGTGTTGAACTTGGGTTAATTAGTGGGTAG
TAATAGGATTAGTAGCCCGGGCCTCTCGGAAAAGAATAGTACTAGTTAGGTTTGTAACCTTCGCATCTAAAAGCATGTTG
GTTTTATCATTCAACGCCGTCAACATATGTCATCTCTCGAGTTTTTGTGCTTTCCTTGTTTCTGTTTATACAAGTTAGCG
TCTCGAAAGGAAGACAGAAAGACCCCGGTCTCTGTATGTCTCTGTATCGATGAGTGTATCACACATCCCTCAATAGATTA
TTGCAACTTATCGTTGTAGCCATGGAGGCCGATATCTCGCAAGCCCTACGCCGCCTGTGCGTTGAGAACACGTCCGCACA
CACGCACGATCGATGTCGGGCCGGTCCTCGCCGATGAGAGGCAGAGAGACTAGAGGAGGGAGTAGAGGCAAAGGCATGAT
GCTCGCTGGTGCTGGTAGGGTTGTTGAACCGCTGGTAGGTAAGAGGGATGGTGACGGCTGCCAAGTGGGTCCGGGAAGGT
GAACCGAAGGTTTTTCTTAATTTAACTGAACCACGGGGTTCAAAGCGTAAAACTAAGGGGTCAAAACCTTGATGGCCAGC
TGGCAAGATAGAGTTGGAGTGCGGCAACGACGAAGAATTCGTCCATGGCCAGTCGAAAAGTTTTTGTGCATCTAATTCAG
GAGCTTTATTAAATAACAATCATAGTGTTACAGTCTGCCCATAGGCACGGATGAAGGAACTCAGGGCTTGCATCAGGCCA
ATTCTCGGTCCAATCAAGTGAGCAAGCTAAACGTGCACACTGATGGGCCGGAACATTTGCATCCCTGCTGACATGGGTAA
CTGAAAGAGAGGCGAAGTTAGCACGGATCTCGTCTAATTCATTTAAGATAGGCGCTGCAACTGATCTTGTGTTGCCGCGC
GACTTTCATACTTGACTAGATCCAAGTAGTCAATCT
>chrUn_1
AAGAACCAAGGTAATAGCGAGACCATAATTTAATTAATATCCAAGCTCCTAATCAAAAAAAAA-TGTCCTCCAAGAGACT
GAGCCGGCATATCGTCTTGAGATTTTACGAAGTCACGTAGACGCCTCGTAGTCGACGGGAACGACTTCTCCCGCTGAACG
CGATTACCGAAAATTCTGAAATAAATCTAGGATAAATGCTAGCACCAGGACTTGAACCCTGGTGGACCGGAGATACCAAT
GTCCTCCTAACCATCCAACCACAGCTTGGTTCGCGATCATTGTCGTTTTACGTGCTGGGGCTGCCATATGTTTGACGATG
ATGTCTTGGTGCCTTGTTCGGAACTTCACACTTGTAAATTAACAACTTGTTTTGTGGTTTGGTTATTCAAAATCATGTCG
TAAGCCATGACAACATCATCTAGCAACTTGGACTTGTGATGCTCACAAGTTATCGGTTGGGCATGCCGTATCAGGTCACT
CTTATTTGTTTTGTCTTAACTGTTACTAGTATCATTTCTAGGCAATATGTTAGCTAAGCCGTCCCTCTAAACTTTTTTTT
-AAATACTATACATGGCAAACACTCATATGTACATACATACATACAATCATCGGTTTTGCTAGAAACCGACACATCATTT
TGAGATTGATAAAGTCACCGACGGGAACGTCTGCTCGTACTGAACGCACACTGTCAATAGGTCTGATATAAATTCTGAAA
AATTCGAGCACTGGTGTAAGTCTATGACTTGAACTCTGATGGCCAGGGATATCATTCTCCTTATAATTATCTAACCACAG
GTTGGTTCGCCAGTCACTCCCAACTTGGTTGATAATAACTAGGTTCGTAATTATATATACATCAGTAGTTTAGATAGATG
TATATTAACTTGGCAAACAAGGGGAGTTCTAATATATATTTGGGTCGCTGTTCTCCCCTTGTTAATATACATCTAACCAA
GAA-----------------------GCTCAGGCTATCATATGTACGCGTGTGATTCCGACGGGCAGCCTCTGGTGGAGG
TGTTCTCCGTCCGCGTCCACGGCGGTGAAGCCCCCACCGGCACCGTCAGCGTCTTCGACGGCAAGCGCGGGCAGATCATC
TACAACAACACCCCGGAGCATCCCCACAAACCAGCTGCTTCTTCCCGCCACCGGAGTTCCGGCAAGCTCCCGCTGACGGG
CCCCTACCGAGCCATCTCTGCAGACGGGTGCGTCGCCATCGTGCTCGACCTCCAAGGTCGCTGCCAGAACAAGGCAGCAC
CGTCGCCGTCTTCTTCTTCATCGTCGTACGTGTCTGAGATACTTGTGGACGTCTACGACGAGAACACAAGGTACGACGAG
GCCATCACCCATGACGACGGCTTCCTACAGGTGAGGTACGCGCTGCTGAGCGACGCCGTGGAAGCCATCGTCGAGGTGAA
GCTCCTCCGGCCACGAGCCAGCGGCACGGTCCGCGGGACGGTCGTCGCTCGCACTGTCCTAGGCGAGGTGGTGCTCTTCG
ACGTCGGCGAGACCACCATGAGCATCGGCATGCAGGAGCTCACCGGCACCCTCCCGCTCGCCAGGTCGGTCGTCGCCGTC
CAGCTGACGTCGTTGCTAACGATCGAAGTAGATCTGCGTCTCGATGGCGACGAGACCATGAGTGGATCTGTTGCGTGCCA
ACCCAAACCCGGTACCAAGGAAGTTCGTGGCCTCGCTGGTGGTGAGGTGGAGGTGACCGTCACATGGTTAGACTAGTCGC
TCCATCCATCCTCTCGCGTTGAATTCCTGTCGAAAGTATATACAAATTGCGGTGTTGAACTTGGGTTAATTAGTGGGTAG
TAATAGGATTAGTAGCCCGGGCCTCTCGGAAAAGAATAGGACTAGTTAGGTTTGTAACCTTCGCTTCTAAAAGCATGTTG
CTTTT---------------------------------------------------------------------------
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>SNPs
---------------------------------------------------------------S----------S-----
----------------------------------------------------------S----S----------------
------------------------------------------------S-------------------------------
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S-----------------------------------------------------------------------S-------
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-----------S------------------------------S------------------------------------S
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---SSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------------
---------------------------------S----------------------------------------------
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-------------------------------------------S------------------------------------
------------------------S-------------------------------------------------------
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------------------S-------------------------------------------------------------
--------------------------------------------------S------S----------------------
------------------------------------------------------------S-------------------
--------------S-----------------------------------------------------------------
---------------------------------------S------------------------S---------------
S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_984
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---GCTTTCAGGAACAAGTAGCGG--------------------------------------------------------
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>reverse_2715
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--------------------------------------------------------------------------CCGCGC
GACTTTCATACTTG----------------------
