>input_sequence_70169
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----------------------------------------------------------------------CCAAACTAGC
TCCGATACAATCTCATGATACAGTGTTCGACTAAGAC-ACATAGCGTGGAGAAGAGGGTTCGACCGGCGTCAATGGCGAC
GTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCGAAGAAACTCGTGAGA
TACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAAAACGAATTTTACAGTG-------TTATGGGTTGATGCA
GAGGCCAAGAAGGAGGAGCCGACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCCGGGCCGTGGTTATCC
CGGGCGTGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCAGGCCGCGGCGGCGGCGGGT
ACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGACGAGGTCCCGGAGCCC
ATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGACCATGCATCCACCGGATGCAGCAGC---GTGTACGCCTGCAC
GTGCCTAGTTAATCTGCTTATAGTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGCTACGTATGTGTTG
ATGTGTGTTTATGGTGTGCTTGTTCCAAAGACGTACTGGTCAGTGTACGGATGTATTG-TACTGCA---CCCGCGTTGTG
TTT---ATGGAATAAAAAGACAGGCGAATT--------------------------------------------------
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>chr6B_1_TraesCS6B01G332700
TAGCTAATCTGGCTAAATATGCGGGGTGTGAGATGGGTGGATGAAAGAACCCCGACAGAAATTGTTTCGCTTCTTGTAAC
CCATGCTACTGTAATTACCATGCAATAAAGAATTGCTTGATGTTAAAAATAAACTATCGGCCTTACACAAAACTTCAGAA
ACTG-----TAAAAGATAATATCGAATGACTTGCAATAAGTCATGGTGAGGAGGAAGAAGGATGTGACATGTGTCAGAAT
AAATTATCAACTGAGATAGCTACGTGTCAATTCCCGTCCAAAACCACGTCACATCATCATTGAAGTCATTTCAGGAGAGG
GAGAAAACTCGATAAAATGACTTCAAGAGTGAGGAGGGGTCTTAAAGTTGAGGGACCAAAACAAAAATAGACTTTCCTCT
TTAATATACTCCTTCCGGTCCTTTTTACTCTGCATATTAGATTTGCCGAAAGTCAAACTTTGCTAAGTTGGACCAAATTT
ATATTAGAAATTATTACCATCTATAATATCTAATAAATATAATAATATGAAAATATATTCCAAGATGAATTTAATGATAT
TGGTGTTGTTATGTGAATGTCTATAATTTTTTATATAAACTTGGTCAAAATTGGATGAGATTGATTTCGGACAAACCTAA
TATGCAGAGTAAAAAAGACTGGAGGGAGTATCTACTGGAGCGTGATAAGTTCATGCATGCGATGTTGCCTAATCAAACTT
GGCATGCACAACGTA---------TGTCTCCTCAACTAGACACGCACATGCATGTCTCCTGTTCCTCCT-----------
-CTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGATGATAAACGCAGAGCTCTTGCTACGTGCATGCATACAG----
GAAGGCTTTATTAATGCATGCCGTCCATCCGCCAACCGCTACCGCTCGGAGCCTGCATGTTGACCCATAGGTCGATAATA
CCGTCAAGTCGTCAACCCTAGAGGTTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCTTCTCACCAAACTAGC
TCCGATACAATCTCATGATACAGTGTTCGACTAAGAC-ACATAGCGTGGAGAAGAGGGTTCGACCGGCGTCAATGGCGAC
GTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCGAAGAAACTCGTGAGA
TACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAAAACGAATTTTACAGTG-------TTATGGGTTGATGCA
GAGGCCAAGAAGGAGGAGCCGACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCCGGGCCGTGGTTATCC
CGGGCGTGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCAGGCCGCGGCGGCGGCGGGT
ACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGACGAGGTCCCGGAGCCC
ATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGACCATGCATCCACCGGATGCAGCAGC---GTGTACGCCTGCAC
GTGCCTAGTTAATCTGCTTATAGTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGCTACGTATGTGTTG
ATGTGTGTTTATGGTGTGCTTGTTCCAAAGACGTACTGGTCAGTGTACGGATGTATTG-TACTGCA---CCCGCGTTGTG
TTT---ATGGAATAAAAAGACAGGCGAATTTACTCTCCTACGCCGGGCTTTGTTAATCAAGTCATCCACC---TGATACT
CATAAATAAAATAGTGCCTTATTTCTGGAATTGCGTGGAGGGAAAATATAAATCAGTTCCCAAATAAGAGTCGTCCTCCG
TGCTGCATGCCTAGTGCGTGTGCGTGTGTCCGTGCGCGCGCGTGTGCATGCGGTTTAGTTTCAACTTCTCTGCTGATGGA
AAGGAGGAACGTGCTTGAACGAAGATTGTACAAACCAATGCATAATTGC-------------------------------
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--------------------ATATTGAAATACCAAAAGATGAGCTATACATACTTCAGGCTGGCCTCATACACCCAGAAG
GAAAATTATTACAGATTTATGCAGAGGCAAGATTA---------------------------------------------
-AGTCGACATTTCAATCGTTTTGTTTCATAGTTTGGTTGTGTAATTTCTTGAATTGACACGTCATGATGTCCATGTTATT
TTGTATTAGGCTTTATTAAGCCTGAGCTGCTGAGCATGTTAGTACAAGGTTTTCAAGCTTTCATTCGTAGTTAAATCGAA
TTATTGACATTAAAACCATGCCAAGGAGACACATAGGAAATCGATAAATCCAAACGGATCCCAGCTTACATGGAGCCTGG
TAAAAACGTGTTCGCACACGAACACGTCGCCGTGTACCCTCGACCAGGGGCGGAGGCAGGATTTGAACATGAGGGGGGCG
AACATGATTGTTGATGTATAAGATGGAATATCACATTATATTAACGCTCATGACAGGGCGCCGATAAAGCATAAAATTAT
GGTTTGTAACTGAAAAAATGGTATTTACCCCATTAATTAGTTGGTATTATCTTTTACTTCGTCATGAACTAGTACTATAA
AAAACATACATAATCACTAGACTAATTTACTATTTATATGAAACCTGTATCATGTAGATTAAGGTCATAATTTATATTAA
AAATCTACTCCTATTTGTTCCGAAATAACTGAATTTTAGGCTTTTCATAAGTCAAACTTCTTCAAATTTGTAAAAACATA
TTTATTTAAT
>chr6A_1
TAGGTAATCGGGCTAAG--TGCGGGTTGTGTGATGGGTGGATGAAAGAACCCCGACTGTAATTGTTTCACTTCTTGTAAC
CGATGCTACTGCAATTACCATGCAATAAAGAATTGCTTGATGTTAAAAATAAACTATCGGCCTTACACAAAATTTCAGAA
TCCGTAATATAAAAGATAATATCGAATGACTTGCAATAAGTCATGGCGAGGAGGAAGAAGGATGTGACATGT--CAGCAT
AAGTTATCAACTGAGATAGCTACGTGTCAGTTCCGGTCAAAAACCACGTCACATCATCATTGAAGTCATTTCACGAGAGG
GAGGAGAAAGAAGGATGCAGCATGGCTGGTCTT------------------GGGACCAAAACAAAAATGGACTTTTTTTT
TTGCGAGGTAACAAAAATGGACTCCC------------------------------------------------------
--------------------CTTTAATATCTACG----------------------------------------------
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--------------------------------TACTGGAGCATGGTTAGTTCATGCATGCGATGTTGCCTGGTCAAACTT
GGCATGCACAACGTAATGAACGTATGTCTCCTCAACTAGACTCGCACATGCATGTCTCCTGTTCCTCCTCAAACTAGTCC
ACTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGAT----AACGCAGAGTTCTTGCTACCCGCATGCATGCAG----
GAAGGCG---TTAATGCATGCTGCCCATCCGCCAACCGCTACCGCTTGGAGCCTGCATGTTGAA----------------
-----------------CTAGAGGCTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCATCTCACCAGACCAGC
TCCGATACAATCTCGTAATACAGTGCTCGACTAAGATTACATAGCGTGGAGAAGAGGGTTCGACCGGCGTCAATGGCGAT
GTTCAAGGGTTCGCTCCTCGTGTTCGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCGAAGAAACTCGTGCGA
CACCATACACTACTATCTACTCCAGTTTTGAATCGATTTGAAA-CAAATTATTATACAGTGTTAATTATGGGTTGATGCA
GAGGCCAAG---GAGGAGCCGACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCCGGGCCGTGGTTATCC
TGGGCGCGG------AGGAGGGTACTACCCGTACCCTGGCCGCGGAAGAGGCGGGTACCCAGGCCGCGGCGGCGGCGGGT
ACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGACGAGGTCCCGGAGCCC
ATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGAGCATGCATCCACCGGAT---GCAGC---GTGTACGCCTGCAC
GTGCCTAGTTAATCTGCTTATACTGTGTGTTCTTGAGGAACGCACCTAGCCCTGTGTTCTTGCAAGCTACGTATGTGTTG
ATGTGTGT---------GCTTGTTCGTAAGACGTACTGGTCAGTGTACGGATGTATTGTTACTGCA---CCCGTGTTGTG
TTT---ATGGAATAAAAAGACAGGCGAATTTGCTCTTCTACGCTGGGCTTTATTAATCAATTCATCCACCAGCTGATACT
CATA-----AATAGTGCCTTATTTCTGGAATTGCGAGGAGGGAAAATATAAATCAGCTGCCAAATAAGAGTCGTCCTCCG
TGCTGTATGC-TAGTGCCTGTGCGTGTGC----GCGCTCGTGTGTGCGTGCGGTTTAGTTTCAACGTCTCTGCTGATGGA
GAGGGTGAACGTGCTTGAACGAAGGTTGTATATAAACCAA------TGC-------------------------------
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--------------------ATATTGAAATACCAAAAGATGAGTT----ATACTTCAGGCTAGCCTCATACGCCCAGAAG
GAAA--TATTACAGATTTATGCAGAGGCAAGAT-A---------------------------------------------
-AGTCAACATTTCAATCGTTTTGTTCCATAATTTGGTTGTGAAATTTCTTGAATTGACACGTCATGATGTTCATGTTATT
TTGTATTAGGCTTTATTGAGCCTGAGCTGCTGAGCATGTTAGTATAAGGTTTTCAAGCTTTCATTCGTAGTTAAATCGAA
GTATTGACATTAAAACCATGGCAAGGAGACACATAGGAAATCGATAAATGCAAACGGAG-CCAGCTTACATGGAGCCTGG
TAAAAAC-------------------------------------------------------------------------
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>chr6D_350
AGGAGGC-------------------------------------------------------------------------
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----------------------------------------CTTAAAGTTGAGGGACCAAAACAAAAATACTCTTTTCTCT
GATAATCTGATGCACTGCCACGTGCATGACTAATATCAAACGGAGCTGGACTGA--------------------------
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-------------------------------------------------TTCATGTATGCGATGTTGCCGAGTCAAACTT
GACAT--------------------------------------GCACATGCATGTCTCCTGTTCCTCCTCAA-CTAGTCC
ACTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGAT----AACGCAGAGCTCTTGCTACCTGCATGCATGCATGCAT
GAAGGCG---TTAATGCATGCCGTCCATCCGCCAACCGCTACCGCTCGGAGCCTGCATGTTGACCCATCGGTCGATAATA
TCGTCAAGAACC-------AGAGGTTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCTTCTCACCAAACCAGC
TCCGATACAATCTCATAATACAGTGGCCGACTAAGAC-ACACAGCGAGGAGAAGAGGGTTCGACCGGCGTCAATGGCGAC
GTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCGAAGAAACTCGTGAGA
AACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAAA-CGAATTTTACAGTG-------GTATGGGTTGATGCA
GAGGCCAAGAAGGAGGAGCCCACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCCGGGCCGTGGTTATCC
CGGGCGCGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCGGGCCGCGGCGGCGGCGGGT
ACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGACGAGGTCCCGGAGCCC
ATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGAGCATGCATCCACCGGAT---GCAGCAGCGTGTACGCCTGCAC
GTGCCTAGTTAATCTGCTTATACTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGC----TATGTGTTC
ATGTGTGTTTATGGTGTGCTTGTTCGAAAGACGTACTGGTCAGTGTACGGACGTATTG-TACTACTGTGCCCGTGTTGTG
TTCATCATGGAATAAAATGACAGGCGAATTTGCTCTTCTACGCTGGGCTTTGTTAATCAATTCATGCACC---TGATACT
CATAAATAAAATAGTGCCTTATTTCTGGAATTGCGAGGAGGGAAAATATAAATCACCTGCCAACTAAGGGTCGTCCTCCG
TGCTGCATGCCTAGTGCGTGTGCGTGTGTCCGTGCGCGCGCGTGTGCATGCGGTTTAGTTTCAACTTCTCTGCTGATGGA
AAGCGTGAACGTGCTTGAACGAAGATTGTATAAACCAATGCATAATTGTATAGGACGTGTTTGGCTCCAGATTGAGTCTC
AACTATTGGTAAAGCGGTCATACTTCCTTTGGTAGTGACCGGTGAAAGACTTCCTTTGTTGAAATGTTCTGTTCCCAAAA
TTCCTATTCCATGACGGATTTAAACTTACCTTCTATTTTCGTGCCTTTAGTAGACCCCATTGTCTCCACCCCGTAGGAAC
TACGAGATCACCCCAAGGACGCCCTCGGCGTCCAGGGGTCACGGACGTTTTAAATCCATTGCAATTTTTTTTCTTCTTCT
TTTTCGAGAAATGGAAGTTTGGGCTTTAGAAGGATTTGGTGTTGCTCATATTTTACAAATCAAAATAAGATAATATAAGA
TATTATTGCTGGAAAAACGAAAAGGGTTTTCCATGAGATGGTAAATGAAAACGATTAGTCCCACTAAGATGTTTCAGTTC
GCCAGGTTGTCTCTTGCCTGCTCATGGATTCAGCAGGCAGGTTGCCGTCGGCTACATTACCTGCGTTGCATACTCTTCTC
CACTCAGTCTGGTTCTGAAAAAACAGCCTCATATGCGACATCTGCAAGTTGTTTGGTTACCTGTATATAGACTTCCTGCA
TTAGGGGATCAACTTTGGCACGTTGTTTGGTTGCCTGCATTGTCTCGGCACATACAACTACACGCTGTTTGGTTGCCCGC
ATGGGGTATGATTAAGAGCTAGCACTTGCACTTAGCACACAGGGTTAAGAGCTAGCAAAGGAAGGGGGAGAAGAAATGCA
GTGTGCGCCGGACCATGGCGACTGTGGTGGATAGTGGCCGTGGCGCCGTGTCCGACATGACGAGCATGGAGTAGTGGGCG
AGCGACCCCGTCGGCAGCACGGCGAGCGATACCGTCGGCGAATTAGTTGCGGTGCTCGCACAAAGACAACGGACAGAGAA
GGAGAATGCAGTGCTCGCGCCATGGTATCGTCCGTGCAGTAGGATGAGGGAGGAGGCCGAGATGATCGACCCCGTCAGCG
GCGCGACGAACTGCAGTGCACAGAGGCAGAGGACACAAGAAAGCAGTGTGCGCGCCATTGCAACATCAGTGCAGTAGGAG
GACGACAAAGAGTAGGCCGACATGAGCGACGCTGGAAATGACTCTAGTGTAGTAGGACGCGGGCAAGGAGATCAACGGGA
AGGGCATCGGCGTCGAGAGGGACGAATAGGAGGGCTTTGAGCAAAGGACACAGGAGCTCGACATGGCGGTGTGAGTGCAC
TAGACTACTGTACAAGGAGAGATGAAGCTACGATCGTCGAAACCAAAAACTTACAACACGAATGTTGTGCAGAACTGCGA
GATTAGGCTGCTGGTTAAAGGAAATTTCTAACGATCGATCGTGCGCGACGAATTTGACAAAATTCGTCCAGAATAGCTCC
AAACGGGAACACGAAATAAAGAACTTCCGGCCGACGAAACTACGAACCGATCACCTGAATGGAACCGTAGCATCGAGATG
CATCTTTTTCGTGTAGAGCTTACCTCGAATCGAAGCACCGTTGTGTAGATCATAGGGATAAGGAAGAGGAGATTAGAGAG
AAGCTTACTGGAGGTTGAACAAGACCTCACTTAATCACCTCGCATCCCTCCCGTCTCCACTCGTACAAGGGCCCGCTCGC
TTGCGCTCGCCTCGGCCTGGTCGCAAGAAACTGCCGATCTGAGCGTTTCCAGCGAGCCAGGCCCAGAGGTGCTTTAAGTT
CCGTGCTATGCAGGCCCAACAGTGTATGCAGCCAACCAAACAGCTCGTTCCCTTTCCGCGCGGGCCTGGTTGGGCCTCAT
GCAGGCAACCAAACACGCTTATATTGAAATACCAAAAGATGCGAACCGACCTGTGGTTGGATGGTTGGAGGGACTGTGGT
ATCCCCAGCCCACCAGGGTTCAACTCCTGGTGCTCGCATTTATTTTTGGATTTATTTCAGGATTTCTGGCAATGTGCATT
TAGTCGACATTTCAATCATTTTGTTTCATAATTTGGTTGTGAAATTTCTTGAATTGACACGTCATGATGTCCATGTTATT
TTGTATTAGGCTTTATTGAGCCCGAGCTGCTGAGCATGTTAGTATAAGGTTTTCAAGCTTTCATTCGTAGTTAAATCGAA
GTATTGGCATTAAAACCATGGCAAGGAGACGCATAGGAAATCGATAAATCCAAACGGA----------------------
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>SNPs
---S-----S------SSS------S----S-------------------------S-S---------S-----------
-S---------S------------------------------------------------------------S-------
S-S-------------------------------------------S-------------------------SS---S--
--S--------------------------S----S---S----------------------------------S------
---S-S-SSSS-SS-SSSSS-S-SSSSS--SSSSSSSSSS-----------------------------------S----
--S-S-SSSSS-SS-S-SSS-S-SSSSSS--SSSSSSS-SSSSS--S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--S-S------------------------S--------
-----------------------------------------S--------------------------------------
---------------------------------------SSSS-------------------S---------S-------
------SSSS----------------------------------------------------------S-----------
S-------SSSSSSSSS-----------------------------------------------------------S---
----------------S--------S------------------------------------------------------
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S------------------------------------------S------------------------------------
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------S-------------------------------------------------------------------------
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--------------------------------------S----------------SSS----------------------
----------------------S---------------------------------------------------------
-------------------------S-----------------------------------------------S------
-------------------------------S----S------S----------------S-------------------
-----------------------------------S--------------------S-S---------------------
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----SS------------------------S-------------------------------------------------
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-------------------------------------------S-SSSS------------S---------S--------
----SS--------------------------------------------------------------------------
------------------------------S----------S--------------------------------------
-----------------S--------------------------S-----------------------------------
S-------------------S-------------------------------------SS--------------------
-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS
>forward_887
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-------------------------------------------------------------------TGCATGCATACAG
GAAGGCT-------------------------------------------------------------------------
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>reverse_4375
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------------------------------------------------------AGGGCGCCGATAAAGCATAA------
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