>input_sequence_70104
--------------------------------------------------------------------------------
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----------------------------------------ATGCCCGCGCCGGCACGCATCCCTCCCCTACTGCGCTGCC
GGATCGCCGCCTCCCCACCGGTGACGTCTGCCGTCAATCGCGAATCCGGCGCCAGCCGTTACACCGC----C--------
---------------------------CGCGCGCGCCACAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCGCATTCCT
CCCCCGCGCGGCCGCCGCCGACCAGCCCGCCTCGGCGGCCTTCGAGCTCGACGAGGACGACCTCTTCGGCTCGGGGGTCG
GATCTCCCGAGCGGCCGCAGCCGCCGCCGCCGCGCCGGCCCTTGTTCATCTCCTCCTTCCGCGCCGCAAACCCTAGCCCC
CGCCTCCGCCGCCCGCCGGGGGGCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTCTCTCGCCGCCCC---------C
GTCCGCCTCGACGTCTCCCGCGTCTCCGGCGACGGCCCTTCCGCGCATGATCCCCGCCATCCCCCGCCCGGCGCCGGCGC
CGGCGATGCAAATGCCGCAGTCTGCGCCGGTGAATGTGCCGGTGGCGCGGATGCGGCGGCCGCCGTTCGAGGCGTTCGC-
-------GAGTGAACCGGACGAGGAGGAGGACGACGAGGAGATGCTGCCGCCGCACGAGATGGTGGCGCGCTCGCGGGCG
CGGGAGTCGCCCATGACGACCTTCTC------------------------------------------------------
----------------------------------GGTGCTGGAGGGCGCCGGGCGCACGCTCAAGGGGAGGGACCTCCGC
CAGGTACGCAATGCAGTGTGGCGGAAGACCGGCCTGCTCGATTGA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------
>chr3A_1_TraesCS3A01G375300
CCGAGGCAGAGCGCCCGTGGCCATAGGAGACCTGCACCTCCACCGTCGCAGCCCTCCTGGTGGTCGCCGTGGTCCTTCTG
GATGCCGACGAGATGCGACCTAGACCAGGGGCAGGGACAGGGTGAGGAGGATGGAACGGGGCAGAAGCGGATTGAGTAAC
CGGCGCCTATGTTGCCGTGGTCCTGCTGGTGCTTGCCGGCGAGGTCCTCGTGGTGGCCGCCGGAGATGCGCGAGGACGGC
GATGGAACTAGAGGAGGGAGCGGGGAAGGAGATGGGTAGAGAAGTAGGGAGCGGGTCCGAATCGAACCTGGGGGATGGCC
GCCGAGCTCCTTGGGACTCACCGCCGAGCTCCCTGGTGGTGGACGCTGACCTCCCCGCGTCTCCTTTTCTTTTTCTCCTC
GAAGACGAGGGGATAAGGCAACGAAGGGGCACGTTTTGCGGGAAAGGGGCAATTCAGAGGAAATCGGAGCACCAAGGCTC
CGTATCGTTGAAGTGAAGCTTTGGTAGGAGGGAATAGGGGGTTGAATTTGGTTTCATTTTGAAGCGGCAATTCACAGTCC
AACCAAACAGCTGAATTGTAATCAAGGAATACCAAATCCATTTCAGGCACCTTAATTCAGACATCCAAACGCAGTGTTAT
GTGAAATCTCCCTAAGTTTTTTTTGTTCCAAACGGGACCTAACTCTTTTGAATCAAAGGAGCAACTTCCTTTAAAAGAAA
TATAAGAGCATTTAGATCACTACTTCACCCATTTCTTTACCGACGAAGTAGTATAATATTAGCACTACAGTCATGCTAAG
TGATGTACTTATGTGGCCAAATATTTATGAAGAAATCAGGTATAGTACTACAAAGAATGTCAGAAAGGAAAACTCAGAAC
CCCTGCCGTGAAAAAAAAAGTACTGCACGGATCTGAAAACCCCAGCAGCATAACCTTGGTGGCTCCGTTCTTCCCCAAAG
GCCAAAGGCAGCAGAGTCCAACAAACCCGCGGACCCACCGATGCCCGCGCCGGCACGCATCCCTCCCCTACTGCGCTGCC
GGATCGCCGCCTCCCCACCGGTGACGTCTGCCGTCAATCGCGAATCCGGCGCCAGCCGTTACACCGC----C--------
---------------------------CGCGCGCGCCACAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCGCATTCCT
CCCCCGCGCGGCCGCCGCCGACCAGCCCGCCTCGGCGGCCTTCGAGCTCGACGAGGACGACCTCTTCGGCTCGGGGGTCG
GATCTCCCGAGCGGCCGCAGCCGCCGCCGCCGCGCCGGCCCTTGTTCATCTCCTCCTTCCGCGCCGCAAACCCTAGCCCC
CGCCTCCGCCGCCCGCCGGGGGGCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTCTCTCGCCGCCCC---------C
GTCCGCCTCGACGTCTCCCGCGTCTCCGGCGACGGCCCTTCCGCGCATGATCCCCGCCATCCCCCGCCCGGCGCCGGCGC
CGGCGATGCAAATGCCGCAGTCTGCGCCGGTGAATGTGCCGGTGGCGCGGATGCGGCGGCCGCCGTTCGAGGCGTTCGC-
-------GAGTGAACCGGACGAGGAGGAGGACGACGAGGAGATGCTGCCGCCGCACGAGATGGTGGCGCGCTCGCGGGCG
CGGGAGTCGCCCATGACGACCTTCTC------------------------------------------------------
----------------------------------GGTGCTGGAGGGCGCCGGGCGCACGCTCAAGGGGAGGGACCTCCGC
CAGGTACGCAATGCAGTGTGGCGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGCAGCTGCCTTCGGCC
ACAGCGATTGAGTTCGTGTGCTTGAATTATTTTGTACAT------------------TACGCGTGATCAGGTGTTAATTT
TAGCTACACCTGTAAAA-TATGTGTTGTATCACTCACCAGTGCGGCATTGCTCTTATTTATGAACTCTCTATTTGAGCTG
TCAGGAGACATTTGAACTATTTGGTATGGATCAAGATAATTGTGTTCGTATGGATGTTTCTGTGT--TAATTTACCCCAA
TAGATATGGTTTATCGATCCTTACTATGGTTACATTCCGAAAGTATGTAGTTTTAACATCGAACGATGTAAACTTGGGCA
TATTTTGAGATATTGTGATGTAGATTAGTTTGCACTGCACTTGTGGAGCTGGATTCTTTACTGGAGCTGGATTCTTTACT
GGAGCTCGTTAGCTACTGCAGCTTCGTTTGGTGAAGA-AGATAGTTTTGCTGTTCTTTTTGCCGATGTGATTCTGCAAAC
TATCCATCGTTTATCGTATTTGAGGTCGCGTGTAGGACATGGAAATGGATCATGGGTGCAATATTGTTCAGGTGTTATAA
-ATTTTACTGCAATTGATGGTGCTGTTCAGTGTTCAGGGTCCGAGTTAAATATGGCTCTGCCTGCTGCTTAGCTGAAGGT
GTGTCCCCGAATTTTCATTTTGATGTTTACCTAGATATTAAAATTGTTTTAGGAAGTTTATACCTTAATCAT--AATTTA
GAGTAGTACCAAGACACTAGACTATGTGAGAGATGCACAATCAGGCAGTCGACTAATTTTAGTCTAAACCCAGGTTTAAA
TATTGTTCAGAGTATAGTCGGTGAACACCATCTTTTATGTATGCCAGATCGTCAGGTCTATGGAGCTGTGATTCTGGATT
TCCAAAAGAAATCGATGGCTTAGCTGTCGAAGTAGTTCAAGCAAACAGAAAATGTAGCTTATTGGAACTCCATGATCCCC
CACTTGTTTTTATTATCAAGGAACACTTGT
>chr3D_849
--------------------------------------------------------------------------------
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------------------------------------------------TAAAAAGAATGTAACAAAA-AAAACTCTGAAT
CCCTGCGGTG------AAAGTACTGCACGGATCTGAAAACCCCAGCAGCATAACCTTGGTGGCTCCGTTCTTCCCCAAAG
------GGCAGCAGAGTCCAACAAACCCGCGGACCCACCGAAGTACGCGCCGGCACGCATCCCTCCCCTACTGCGCTGCC
GGATCGCCGCCTCCCCACCGGTGACGTGCGCCGTCAATCGCAAATACGGCGCCAGACGTTACACCGC----CCGCCCGCA
CAGCCTCGCCTCGCGCTCGCCATGGATCGCGCGCGCCACAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCGCATTCCT
CCCCCGCGCGGCCGCCGGCGACCAGCCCGCCTCGGCGGCCTTCGAGCTCGACGAGGACGACCTCTTCGGCTCGGGGGTCG
GATCTCCCGAGCGGCCGCAGCCGCCGCCGCCGCGCCGGCCCTTGTTCATCTCCTCCTTCCGCACCGCAAACCCTAGCCCC
CGCCTCCGCCGCCCGCCGGGGGGCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTCTCTCGCCGCCCC---------C
GTCCGCCTCGACGTCACCCGCGTCTCCGGCGACGGCCCTTCCGCGCATGATCCCCGCCATCCCCCGCCCGGCGCCGGCGC
CGGCGATGCAAATGCCGCAGTCCGCGCCGGTGAATGTGCCGGTGGCGCGGATGCGGCGACCGCCGTTCGAGGCTTTCGC-
-------GAGTGAACCCGATGAGGAGGACGAGGACGAGGAGATGCTGCCGCCGCACGAGATGGTGGCGCGCTCGCGGGCG
CGGGAGTCGCCCATGACGACCTTCTC------------------------------------------------------
----------------------------------GGTGCTGGAAGGCGCTGGGCGCACGCTCAAGGGGAGGGACCTCCGC
CAGGTACGCAATGCCGTGTGGCGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGTAGCTGCCTTCGACC
AGTC--ATTGAGTTTGTGTGTTTGAATTATTTTGTACAT------------------TACGCGTGATCAGGTGTTAATTT
TAGCTACACCTGTAAAAATGTGTGTTGTATCACTCACCATTACGGCATTACTCTTATTTATGAACTCTTTATTTGAGCTG
TCATTAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGTGTTCTTATGGATGTTTCTGTGT--TAATTTGCCCCAA
GAGATATGGTTTATCAATCCTTACTATGGTTACATTCCGAAAGTATGTAGTTTTAACATCGAACAATGTAAACTTGGGCA
TATTTTGAGTTATTGTGGTGTAGATTACTTTGCACTGCACTTATGGAG------------------TTGGATGCTTTACT
CGAGCTTGTTAGCTACTGCAGCTTTGTTTGGTGAAGA-CGATAGTTTTGCAGTTCTTTTTGCCGATGTGATTCTGCAAAC
TATCCATCGTTTATCGTATTTGAGGTCACGCATAGGACATGGAAATGGATCATGGGTGCAATGTTGTTCAGGTGTTATAA
-ATTTTACTGCAATTGATGGTGATGTTCAGTATTCAGGGTCCGAGTTAAATAA-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTCCTCGAATTTTCATTGTGATGTTTATCTGGATATTAAAATTATTTTAGGAAGTTTATAGTTTAGTCAT--AATTTA
GAGTA---CTAAGATACTAGGCTATGTCAGAGATGCACAATCAGGCACTCGACTAATTTTAGTCTAAACCC-AGTTTAAA
TATTGTTCATAGTATAGTCG---AACACTATCTTGTATGTATGCCAGATCGTCAGGTCTATGGAGCTGTGATTCTGGATT
TCCAAAAGATATCGGTAGCTTAGCTGTCGAAATAGTTCAAGCAAACAGAAAATATAGCTTA--------CCATGACCCCC
CACATGTTCTTATTATTAAGGAACACTTGT
>chr3B_897
--------------------------------------------------------------------------------
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----------------AAAGTACTGCACGGATCTGAAAACCCCAGCGGTACAACCTTGGTGGCTCCGTTCTTCCCCAAAG
------GGCAGCAGAGTCCAACAAACCCGCGGACCCACCGAAGTACGCGCCGGCACGCATCCCTCCCCTACTGCGCTGCC
GGATCGCCGCCTCCCCACCGGTGACGTTTGCCGTCAATCGCGAATCCGGCGCCAGCCGTTACATCGCTCGTCCGCCCGCA
CAGCCTCGCC-----------ATGGATCGCGCGCGCCACAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCGCATTCCT
CCCCCGCGCGGCCGCCGGCGACCAGCCCGCCTCGGCGGCCTTCGAGCTCGACGAGGACGACCTCTTCGGCTCGGGGGTCG
GATCTCCCGAGCGGCCGCAGCCGCCGCCGCCGCGCCGGCCCCTGCTCATGTCCTCCGTCCGCGCCGCAAACCCTAGCCCC
CGCCTCCGCCGCCCGCCGGGGGGCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTCTCTCGCCGCCCCCGTCTGCTTC
GTCCGCCTCGACGTCCCCCGCGTCTCCGGCGATGGCCCTTCCGCGCATGATCCCCGCCATCCCCCGCCCGGCGCCGACGC
CGGCGATGCAAATGCCGCAGTCCGCGCCGGTGAATGTCCCGGTAGCGCGGCTGCGGCGACCGCCGTTCGAGACGTTCGT-
-------GAGTGAACCGGATGAGGAGGAGGACGACGACGAGATGCTGCCGCCGCACGAGATGGTGGCGCGCTCGCGGGCG
CGGGAGTCGCCCATGACGACCTTCTC------------------------------------------------------
----------------------------------GGTGCTGGAGGGCGCTGGACGCACCCTCAAGGGGAGGGACCTCCGC
CAGGTACGCAATGCCGTGTGGCGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCAATTGGCAGCTGCCTTCGACC
ACATTGATTGAGTTTGTGTGTTTGAATTATTTTGTACAT------------------TACGCGTGATCAGGTGTTAATTT
TAGCTACACCTGTAAAA-TGTGTGTTGTATCGCTCACCAGTGCGGCATTACTCTTATTTATGAACTCTCTATTTGAGCTG
TCAGGAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGCGTTCTTATGTATCTTTCTGTGTTATAATTTACCCCAA
GAGATATGGTTTACCGATCCTTTCTATTGTTACATTCCGAAAGTACGAACTTTTAACATTGAAAGATGTAAACTTAGGCA
TATTTTGAGATATTGTGATGTAGATTACTTTGGACTGCACTTATGGAG------------------CTGGATTCTTTACT
TGAGCTTGTTAGCTACTGCAGCTTTGTTTGGTGAAGA-AGGTAGTTTTGCAGTTCTTTTTGCCGATGTGATTCTGCAAAC
TATCCATGATTCATCGTATTTGAGGTTGCACGTAGGATGTGGAAATGGATCATTGGTGCAAAATTGTTCAGGTGTTATAA
-ATTTGACTGCAATTGATGGTGCTGTTCAGTATTTAGG-TTTGAGTTAAATAT-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTGCTCGAATTTTCATTGTGATGTTTACCTCGATATTAAAATTATTTTAG----------------------------
--------------------------------------------------------TTTTAGTCTAAACCCAGGTTTAAA
TATTGTTCATAGTATCGTCG---AACACTATCTTTTATGTATGCCAGATGGTCAGGTCTATGGAGCTGTGATTCGGGAAT
TCCAAAAGAAATCGATGGCTTAGCTGTCCAAATAGTTCAGGCAAACAGAAAATATAGCTTAATGGAGCTCCATGATCACC
CACTTGTTTTTATTATCAAGGAACACTTGT
>chr1A_1109
CGT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------GCGCGCCATAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCACATTCCT
CCCCCGCGCGGCCGCCGGCGACCAACCCGCCTCGGCGGCCTTCGAGCTCGACGTGGACGACCTCTTCGGT----------
--TCTCCCGAGCGGCCGCGGCCGCAGCCGCGACGCCGGCCCTTGCTCATCTCCTCCATCTGCGCCGCAAACCCTAGCCCC
CCG---CGCCGCCCGCCGGGGGCCATCCTCGAGGCCCTCCCCGAGCGCCTCGAGCCTCTCTCGCCGCCCCCGTCTGCTTC
ATTCGTCTCGACATCCCCCGCGTCTCCGGCGATGGCCCTTCCACGCATGATCCCCGCCATCCCCCGCCCGGTGCCGTCGT
CGGCGATGCACATGCCGCAGTGCGCGCCGATGAATGTGCCAGCGGCGCGGATGCGGCGACCGACGGTCGAGGCGTTCGCA
ACTTCGCGAGTGAAGCAGATGAGGACGACTACGACGTGGAGATGTTGTCGCCGCACGAGATGGTGGCGCGCTCGCCGGCG
TGGGAGTCGCCCATGACGACCTTCTGGGTGTTGGAGGGCGCTGGACACACGCTCCCATGACGACC---------------
-----------------------------TTCTGGGTGCTGGAGGGCGCTGGACACACGCTCAAGGGGAGGCACCTCCGC
CAGGTACGCAATGCCGTGTGGTGGAAGACCTGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGTAGCTGCCT------
ACAGCTATTGAATTTGTGTGTTTGAATTATTTTGAACAT------------------TAC--------------------
-------ACCTGTAAAA-TTTGTGTTGTATTACTCACCATTCCGGCATTACTCTTATTTATGAACTATCTATTTGAGCTC
TCAGGAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGTGCTTTTATGGATGTTTCTGTGT--TAATTTACCCCAA
GAGATATGATTTATCGATCCTTAGTATGGTTACATTCCAAAAGTATGTAGTTTGAACATCGGACGATGTAAACTTGGGCA
TATTTTGAGATATTGTGGTGTAGATTACTTTGCACTGCACCTATGGAG------------------TTGGATTCTTTACT
GGAGCTTGTTAGCCACTGCAGCTTCGTTTGGTGAAGA-CGATAGTTTTGCAGTTCCTTTTAGCGATGTTATTCTGCAAAG
TATCCATTGTTTATCGTATTTGAGA-CGCGCATAGGACGTGGAAATGGATCATCGGAGCAATATTGTTCAGGTGTTATAA
-ATTTTACTGCACTTGATGGTGATGTTCAGTATTCAGG-TCTGAGTTAAATAT-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTGCTCGGATTTTCATTCTGATGTTTACCTGGATAATTAAATTATTTTAGGAAGTTTATAGTTTAATCATAAAATTTA
GAGTA---CTAAGATACTAGACTATGTCAGAGATGCATAATCAGGCAGT-GTCTAATTTTGGTCTAAACCCAGGTTTAAA
TACTGTTCAGAATATAGTCA---AACACTATCTTTTATGTATGCCAGAGCATCAGGTCAATGGAGCTGTGATTCAGGATT
TCCAAAAGAAATCGACGGCTTAGCTGTCAAAATAGTTGAAACAAACAGAAAATTATGCTTAATGGGGCTCCATGATCCCC
CACTTGTTTCTATTATTAAGGAACATTTGT
>chr5A_1109
CGT-----------------------------------------------------------------------------
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------------------------------GCGCGCCATAAGAGCTCGCCCAGCTCCGAGCGCTTCCTCGGCGCATTCCT
CCCCCGCGCGGCCGCCGGCGACCAACCCGCCTCGGCGGCCTTCGAGCTCGACGTGGACGACCTCTTCGGT----------
--TCTCCCGAGCGGCCGCGACCGCAGCCGCGACGCCGGCCCTTGCTCATCTCCTCCATCTGCGCCGCAAACCCTAGCCCC
CCG---CGCCGCCCGCCGGGG-CCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTTTCTCGCCGCCCCCGTCTGCTTC
ATTCGTCTCGACATCCCCCGCGTCTCCGGCGATGGCCCTTCCACGCATGATCCCCGCCATCCCCCGCCCAGTGCCGTCGC
CGGCGATGCACATGCCGCAATGCGCGCCGATGAATGTGCCAGCGGCGCGGATGCGGCGACCGACGGTCGAGGCGTTCGCA
ACTTCGCGAGTGAAGCAGATGAGGACGACTACGACGTGGAGATGTTGTCGCCGCACGAGATGGTGGCGCGCTCGCCGGCG
TGGGAGTCGCCCATGACGACCTTCTAGATGCTGGAGGGCGCTGGACACACGCTCCCATGACGACC---------------
-----------------------------TTCTGGTTGCTGGAGGGCGCTGGACACACGCTCAAGGGCAGGCACCTCCGC
CAGGTACGCAATGCCGTGTGGTGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGTAGCTGCCT------
ACAGCTATTGAATTTGTGTGTTTGAATTATTTTGAACATTACGCGTGATCAAGTGGCTAC--------------------
-------ACCTGTAAAA-TTTGTGTTGTATTACTCACCATTACGGCATTACTCTTATTTATGAACTATCTATTTGAGCTC
TCAGGAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGTGCTTTTATGGATGTTTCTGTGT--TAATTTACCCCAA
GAGATATGATTTATCGATCCTTAGTATGGTTACATTCCAAAAGTATGTAGTTTGAACATCGGACGATGTAAACTTGGGCA
TATTTTGAGATATTGTGGTGTAGATTACTTTGCACTGCATCTATGGAG------------------TTGGATTCTTTACT
GGAGCTTGTTAGCCACTGCAGCTTCGTTTGGTGAAGA-TGATAGTTTTGCAGTTCCTTTTAGCGATGTTATTCTGCAAAG
TATCCATTGTTTATCGTATTTGAGA-CGCGCATAGGACGTGGAAATGGATCATCGGAGCAATATTGTTCAGGTGTTATAA
-ATTTTATTGCACTTGATGGTGATGTTCAGTATTCAGG-TCTGAGTTAAATAT-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTGCTCGAATTTTCATTCTGATGTTTACCTGGATAATTAAATTATTTTAGGAAGTTTATAGTTTAATCATAAAATTTA
GAGTA---CTAAGATACTAGACTATG------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------
>chr3A_1121
--------------------------------------------------------------------------------
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---------------------------------------AAGAGCTCGCACAGCTCCGAGTGCTTCCTCGGCGCATTCCT
CCCATGCGCGGCCGCCGGCGACCAACCCGCCTCGGCGGCCTTCGAGCTCGACGTGGACGACCTCTTCGGT----------
--TCTCCCGAGCGGCCGCGGCCGCAGCCGCGACGCCGGCCCTTGCTCATCTCCTCCATCTGCGCCGCAAACCCTAGCCCC
CCG---TGCCGCCCGCCGGGGGGCATCCTCGAGGCCCTCCCCGAGCGCCTCGGGCCTCTCTCGCCGCCCCCGTCTGCTTC
ATTCGTCTCGACATCCCCCGCGTCCCCGGCGATGGCCCTTCGACGCATGATCCCCGCCATCCCCCGCCCGGTGCCGTCGC
CGGCGATGCACATGCCGCAGTGCGTGCCGATGAATGTGCCAGCGGCGCGGATGCGGCGACCGACGGTCGAGGCGTTCGCA
ACTTCGCGAGTGAAGCAGATGAGGACGACTACGACGTGGAGATGTTGTCGCCGCACGAGATGGTGGCGCGCTCGCCGGCG
TGGGAGTCGCCCATGACGACCTTCTGGGTGCTGGAGGGCGCTGGACACACGCTCCCATGACGACCTTCTGGGTGCTGGAG
GGCGCTGGACACACGCTCCCATGACGACCTTCTGGGTGCTGGAGGGCGCTGGACACACGCTCAAGGGGAGGCACCTCCGC
CAGGTACGCAATGCCGTGTGGTGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGTAGCTGCCT------
ACAGCTATTGAATTTGTGTGTTTGAATTATTTTGAACATTACGCGTGATCAAGTGGCTAC--------------------
-------ACCTGTAAAA-TTTGTGTTGTATTACTCACCATTACGGCATTACTCTTATTTATGAACTATCTATTTGAGCTC
TCAGGAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGTGCTTTTATGGATGTTTCTGTGT--TAATTTACCCCAA
GAGATATGATTTATCGATCCTTAGTATGGTTACATTCCAAAAGTATGTAGCTTGAACATCGGACGATGTAAACTTGGGCA
TATTTTGAGATATTGTGGTGTAGATTACTTTGCACTGCACCTATGGAG------------------TTGGATTCTTTACT
GGAGCTTGTTAGCCACTGCAGCTTCGTTTGGTGAAGA-CGATAGTTTTGCAGTTCCTTTTAGCGATGTTATTCTGCAAAG
TATCCATTGTTTATCGTATTTGAGA-CGCGCATAGGACGTGGAAATGGATCATCGGAGCAATATTGTTCAGGTGTTATAA
AATTTTACTGCACTTGATGGTGATGTTCAGTATTCAGG-TCTGAGTTAAATAT-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTGCTCGAATTTTCATTCTGTTGTTTACCTGGATAATTAAATTATTTTAGGAAGTTTATAGTTTAATCATAAAATTTA
GAGTA---CTAAGATACTAGACTATGTCAGAGATGCATAATCAGTCAGT-GTCTAATTTTGGTCTAAACCCAGGTTTAAA
TACTGTTCAAAATATAGTCA---AACACTATCTTTTATGTATGCCAGAGCATCAGGTCAATGGAGCTGTGATTCAGGATT
TCCAAAAGAAATCGACGGCTTAGCTGTCGAAATAGTTAAAACAAACAGAAAATTATGCTTAATGGGGCTCCATGATCCCC
CACTTGTTTCTATTATTAAGGAACATTTGT
>chr4A_1449
--------------------------------------------------------------------------------
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--------------------------------------------------------CCATCCCCCGTCCGGTGCCGTCGC
CGGTGATGCACATGCCGCAGTGCGCGCCGGTGAATGTGCCAGGGGCGCGGATGCGGCGACCGACGGTCGAGGCGTTCGC-
-------GAGTGAAGCGGATGAGGACGACTACGACGTGGAGATGATGTCGCCGCAGGAGATGGTGGCGCGCTCGCCGGCG
TGGGAGCCGCCCATGACGACCTTCTGGGTGCTGGAGC-------------------------------------------
--------------------------------------CTGGAGGGCGCTGGACACACGCTCAAGGGGAGGGACCTCCGC
CAGGTACGCAATGCCGTGTGGTGGAAGACCGGCCTGCTCGATTGATCCATTGCGTTTGCATTTGGTAGCTGCCT------
ACAGCTATTGAATTTGTGTGTTTGAATTATTTTGTACATTACGCATGATCAGGTGGCTAC--------------------
-------ACCTATGAAA-TTTGTGTTGTATTACTCACCATTACGGCATTACTCTTATTTATGAACTATCTATTTGAGCTC
CCAGGAGACA-TTGAACTATTTGGTATGGATTAAGATAATTGTGCTTTTATGGATGTTTCTGTGT--TAATTTACCCCAA
GAGATATGACTTATCGATCCTTAGTATGCTTACATTCCGAAAGTATGTAGTTTAAACATCGAACGATGTAAACTT-GGCA
TGTTTTGAGATATTGTGGTGTAGATTACTTTGCACTGCACCTATGGAG------------------TTGGATTCTTTACT
GGAGCTTGTTAACTACTGCAGCTTCGTTTGGTTAAGACTGATAGTTTTGCAGTTCCTCTTGGCGATGTGATTCTGCAAAG
TATCCATTGTTTATCGTATTTGAGA-CACGCATAGGATGTGGAAATGGATCATTGGTGCACTATTATTCAGGTGTTAT-A
AATTTTACTGCACTTGATGGTGATGTTCAGTATTCAGGGTCCGAGTTAAATAT-GCTCTGCGTGCTGCTTAGCTGAAGGT
GTGTGCTCGAATTTTCATTGTGATGTTTACCTGGATAATTAAATTATTTTAGGAAGTTCATAGTTTAATCATAAAATTTA
GAGTA---CCAAGGTACTAGACTATGTCAGAGATGCATAATCAGGCAGT-GACTAATTTTGGTCTAAACCCAAGTTTAAA
TACTGTTCAGAATATAGTCG---AACCCTATCTTTTATGTATGCCAGAGCGTCAGATCAATGGAGCTGTGATTCAGGATT
TCCAAAAGAAATTGAGGGCTTAGCTGTTGAAATAATTCAAACAAACAGAAAATTATGCTTAATGGGGCTCCATGATCCCC
CACTTCTTTCTATTATTAAGGAACATTTGT
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---------S-S---SS-------S---S
------S---SSSSSS----------------------------------------------------------------
SSSSSS-----------------------------------S-SS-----------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------S-----------------------------------S---------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------S--------------------------------------------------------------S--
--------------S-----S-----------------------------------------------------------
-------------------S-----------------------------S------------------------------
----------S--------------------S---------------S--------------------------------
S-------------------------------------------------------------------------------
---------------------------S--------------S-----SSSSSSSSSSSSSSSSSS--------------
------S-------------------------------------------S-----------------------------
------------------------------S-------------------------------------------------
-------------------------------S---------------------S-------S------------------
------S------------S------------S------------S----------------SS----------------
-----SSS------S------------S----------------------------------------------------
--------------------SSS-----S---------------------------------------------------
-------------------------------S---------------------S-------S----S-------------
------------------------------
>forward_251
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------GAGGACGGC
GATGGAACTAG---------------------------------------------------------------------
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------------------------------
>reverse_2268
--------------------------------------------------------------------------------
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---------------------------GTTTGCACTGCACTTGTGGA---------------------------------
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------------------------------
