>input_sequence_70089
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----------------------------------------ATGGCCGATTCCACCGCGCACCCGCCGCCGGCGGTGGATC
AGCGAGTCCAGCGGCTGGCTACCCGCGCCTCCATCGCAGTCGCCGCTGCGGCTACGCTCTTCCTCCTGTACCTCGTCCGG
CACGCCTCCACCCCCTGCTTCCCCGCGTCCCACACCATCCCCCTCTCTCCCTTCCCCCGCAACTCCTGCGACGCCGCCTC
CCGCCGCGTCCTCCCCCCGGACCGCCGGCTCGCAAAGCTCCGCTCATCCTCTCGCTGGCGCCGCCGCTCCACTGCGCTAG
CGTCCTCCGTATTCCCCCCGCTACACGGCCTCCGCCTCCTGGCCAACTCCTCCCGCGTCCTCTGCCTCACTGCCGGCGCC
GGCAACGCCGTCGACGCGCTCCACGCAGCGGGGGTAAGCGAAGTGACCGGGATCGACCTCGTGGACTTCCCGCCGCTCGT
CCGTCGCGCAGACCCCCACCGCCTCCCCTTCTCTGACGGCGCCTTCGATCTCATCTTCTCCGACGACCCGGCGGGGATCT
CCGGCGCGCTCTTCCCGGCTCGCGTCGCCGCGGAGGCCGAGCGCGCTGTCCGCGACGGAGGCGCCATCGCCCTCGCCGTC
GACTGGCAGCAGGACCCCGCCGCCGTCGCCGCGCTCTTCAAGAGGTCGCGCGTCGTGGATACCAGGGCTGTCACCTTGGA
TGGCTCCCAGGTCAGGTTGCTAATT-TTTCAGAGTAATGGCACCACC-CTGAACCCGCGATGA-----------------
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>chr1A_1_TraesCS1A01G319800
TGATGATGAGGGAGGTTGGAGAAGGAAGCATCACATAGGGCCATCCCCCACTGCAGTTTTGTATGTCGCGTTTTAACCGT
TTTCCTTTTGGGTTTCAATTTTCTTGGCTCTCTTCTGTTTTTTGTCTTCATTTTTTAAAAAATTTACTTTTTATTTTTAT
TTTTTAGTATGTGTCTACTTTTTCCATACACATTGTATATTTTTTGTACACGTTAGGAACATTTTATATTCATGTTTAAC
ATTTCGCAAATACATGGTAACATTTTTTTTTCAAATATATGTTTTGATGTATACTTTTTCCATAAACATTGTACATTTTT
CGTATACATTTGAAACATTATTTTACACACGGTTAACATTTTTTGAAACAAACATTCTCGAACATTTTTTCGAATGTGTT
AAACATTTCTTAAATACATGTTGATAATTTTTTTAAAATACATGCTGAAGTATTTCTTTAAGTGATATGAAGTTTTTAAA
CTATGTAAACATTTTTGTACATTCTATAACATTTTTTAAATGTCACGAATATATATTAGAAACACGTGAACATTTTTAAA
ATGTAACACATTTTTTGAATAGTACTAACCATTTTCTTGAATTTCACAGACATTTTTTACATTGTACAAACATATTTTCA
TGTCATGAGTAGTACATGTTTTTTGAAACACATGAATTCTCTTTAAATGTCACAAACATGTTTTTTGCCAATGGTATCAA
ACATCTTTTGATCATTATGCTAACAATTTTCTTACGCTGCCCTACGTGGGGAATAGGACGCACGTTCCGTTTGTACTTCT
TCAGACTGAGACAAGAAATTGACACAAGAAATTGAAATGATGATCTTAACAGCGCTGTGCTTGTGGTCCTTTTTTCAAGT
GTACGGCAGGTATGTTCATTGTAAGGCCCATACAGAGTATGTGTCCATAGAATTGCCCGGCCGAGAGAATCCCAACAAAC
TCCGATCATCCTGTGACGCGCATGATCAAAACGCCAACAGATGGCCGATTCCACCGCGCACCCGCCGCCGGCGGTGGATC
AGCGAGTCCAGCGGCTGGCTACCCGCGCCTCCATCGCAGTCGCCGCTGCGGCTACGCTCTTCCTCCTGTACCTCGTCCGG
CACGCCTCCACCCCCTGCTTCCCCGCGTCCCACACCATCCCCCTCTCTCCCTTCCCCCGCAACTCCTGCGACGCCGCCTC
CCGCCGCGTCCTCCCCCCGGACCGCCGGCTCGCAAAGCTCCGCTCATCCTCTCGCTGGCGCCGCCGCTCCACTGCGCTAG
CGTCCTCCGTATTCCCCCCGCTACACGGCCTCCGCCTCCTGGCCAACTCCTCCCGCGTCCTCTGCCTCACTGCCGGCGCC
GGCAACGCCGTCGACGCGCTCCACGCAGCGGGGGTAAGCGAAGTGACCGGGATCGACCTCGTGGACTTCCCGCCGCTCGT
CCGTCGCGCAGACCCCCACCGCCTCCCCTTCTCTGACGGCGCCTTCGATCTCATCTTCTCCGACGACCCGGCGGGGATCT
CCGGCGCGCTCTTCCCGGCTCGCGTCGCCGCGGAGGCCGAGCGCGCTGTCCGCGACGGAGGCGCCATCGCCCTCGCCGTC
GACTGGCAGCAGGACCCCGCCGCCGTCGCCGCGCTCTTCAAGAGGTCGCGCGTCGTGGATACCAGGGCTGTCACCTTGGA
TGGCTCCCAGGTCAGGTTGCTAATT-TTTCAGAGTAATGGCACCACC-CTGAACCCGCGATGATATTCTGAACCAGTGTT
AA----------------------------------------------------------------AGTAATTCTCCTGT
TCATCATGTTGTTTCTGTTTAGATCAAACACTAGATTTTACTGAGCTATGGATTTCTGCATCAGAATACAACTGTAACTG
TGTAGATCAATAGTTGAGAAAAATGGAAGATTGCTGCGGTGCCGGTTGCTCTAGCAATAATAAATTTCTAACATTCCCTG
AAAGTTCGATCATTTTGCTGTGCTTGTTTTTCTAGCTACGACCATACGAATTAGGATCAACATATATCAATTCAATACAG
ATTTTGGGAATATATATATA--GGC--TCATATGCACCGCTTTGCAATTTTGCA-AACTTGTGGGCTTTTAATAGTTCTT
AAAAAGATCATGGTACTATAAATATTGATATAGATACATATATACAGAAATGTGTGAAGAAGATATGATCAT---TTATG
TACTGTACAAAATAGAGTGCTTCTATGGTTTGATGGAGTTTTTTCG---TCTGCTATTTAAAGCAAATTAATGGTTGTGA
TTAGAGGACTACTCGGCCGGTTTTCTTTTAAGAAAGGTTAG-TTTGGTTAGTTACAAACATTGTTATCCAGGTCCAAAGA
GGTGAAGACTAAAAACCCATGGACAACCCATGCACACACTTCATGTACAAGTACAACCCACAAGCACTTGTCTGAAAACT
ACCAGGTCTAGTGCCATAGTTGTGTACTCATCTCCTTCGCCCGACTGTCTGGACTCTGAAGAGAAGT---TACCGGCTTG
CCGTGCATCCTAACCCTCAG--AAATCCCAAATTCCAAATTAAATTATTGTCCTTGACCTCCAATTTGATCATCATCCCC
ACCCGGACCTGGCCGGCGCCCAAATCCTAAACTTTGGTCATCTGCCCAACTGAGTCCTAATTATTATACCATCCCAATGT
TCAATGTACTATCTCTACTCCTAAAGGCGGACTTGGTAGCTTCTCTTTCACGGATTTTTTTTCACCTCGCCTCCCACCAT
CATCTATTTTCGTCTGGTTTTTTT
>chr1D_890
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---------GTTTGTTCATTGTAAGGCCCATACAGAGTATGGGTCCACAAAATTGCCGGTCTGAGAGAATCCCAACAAAC
TCCGATCATCCCGTGACGCGCATGATCGAAACGCCAACAGATGGCCGATTCCACCGCGCACCCGCCGCCGGCGGTGGATC
AGCGAGTCCAGCGGCTGGCTACCCGCGCCTCCATCGCAGTCGCCGCTGCGGCGACGCTCTTCCTCGTGTGCCTCGTCCGG
CACGCCTCCACCTCCTGCTTCCCCGCGTCCCACACCATCTCCCCCTCTCCCTTCCCCCGCGACTCCTGCGACGCCGCCTC
CCGCCGCGTCCTCCCCCCGGACAGCCGGCTCGCTAAGCTCCGCTCATCCTCTCGCTGGCGCCGCCGCTCCGCCGCGCTGG
CTTCCTCAGTATTCGCCCCGCTCCGTGGCCTCCGCCTCCTGGCCGGCTCCTCCCGCGTCCTCTGCCTCGCCGCCGGAGCC
GGCAACGCCGTCGACGCACTCCACGCAGCGGGGGTAAGCGAAGTGACCGGGATCGACCTCGTGGACTTCCCGCCGCTCGT
CCGTCGCGCAGACCCCCATCGCCTCCCATTCTCTGACGGCGCCTTCGATCTCATCTTTTCCGACGACCCGGCGGGGATCT
CCGGCGCGCTCTTCCCGGCTCGCGTCGCCGCGTAGGCCGAGCGCGCTGTCCGCCGCGGAGACGCCATCGCCCTCGCCGTG
GACCGGCAGCAGGACCACGCCGCCGTCGCCGCGCTCTTCAAAAGGTCGCGCGTCGTGGATACCAGGGTTGTCACCTTGGA
TGGCTCCCAGGTCAGGTTGCTAATT-CTTCAGAGTAATGGCACCACC-CTGAACCCGCGATGATATTCTGAACCAGTGTT
AAGTA---------------------------------------------------------------TAATTCTCATGT
TCATTATGTTGTTTCTGTTAAGATCAAACACTAGATGTTACCGAGCTATGGATTTCTGCATCAGAACATAACTGTAACTG
TGTAGATCAATAGTTGAGAAAAATGGAAGATTGCTGCGGTGCCGGTTGCTCTAGCAATAATAGATTTCTAACATTCCCTG
AAAGTTCGATCATTTTGCTGTGCTTGTTTTTCTTGCTATGACCATACGAATTAGGATCAACACTTATCAACTCAATACAG
ATTTTGGGAATATATATATATAGGT--TCATATGCACCGCTTTGCGATTTTGCATAACTTGTGCGCTC-------TTAAC
AAAAGGATCATGGTACTATAAATATTGATTTAGATACATATATACAGAAATGTGTGAAGAAGGC---ATGAT---TTATG
TACTGTACAAATAAGAGTGCTTCTATGC-TTGATGGAGTTTTTTCTTCTTCTGCAATCTAAAGCAAATTAATGGCTGTGA
TTAGAGGACTACTCCGCCGGTCTTGTTTTAAGAAAGGTTAG-TTT-GTTAGTTACAAACATTGGTATCCAGGTCCAAACA
GGTGAAGACTAAAAACCCATGGACAGCCCATGTACACACTTCAT------GTACAACCCACAAGCACTTGTCTGAAAACT
ACCAGATCCAGTGCCATAGTCGTGTACTCGTCTCCTTCGCCGGACTGCCTCGACTCTGAAGAGAAGATGATATCGGCTTG
CCGTGCATCCTAACCCTCAG--A--TCCAAAATTCCAAATTAAATTATTGTACTTGACCTCCAATTTGATCATCATCCCC
ACCCGGAGCTCGCCGGCGCCCAAATCCTAAACCTAGGTCATCTGTCCAACTGAGTCCTAATTATTATACCATCCCAATGT
TCAATGTACTATCTCTACTCCTAAAGGCGGACTTGGTAGCTTCTCCTCCATGGTTTTTTTCG--CCTCACCTCCCACCAT
CATCTATTTTCGTCTGGTTTTTTT
>chr1B_893
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------------TGTTCGTTGTAAGGCCCATACAGAGTATGGGTCCACAAAATTGCCGGTCTGAGAGAATCCCAACAAAC
TCCGATCATCCCGTGACGAGCATGATCCAAACGTAACC-GATGGCCGATTCCACCGCGCACCCGCCGCCGGCGGTGGATC
AGCGAGTCCAACGGCTGGCTACCCGCGCCTCCATCGCACTCGCCGCTGCGGCGACGCTCTTCCTCGTGTACCTCGTCCGG
CACGTCTCCACCTCCTGCTTCCGCGCGTCCCACACCACCCCTCTCTCTCCCTTCCCCCGCAACTCCTGCGACGCCGCCTC
CCGCCACGTCCTCCCCCCAGACCGCCGGCTCGCCAAGCTCCGCTCATCCTCTCGCTGGCGCCGCCTCTCTGCCACGCTGG
CTTCCTCCTTATTCCCGCCGCTACACGGCCTCCGCCTCCTGGCCACCTCTTCCCGCGTCCTCTGCCTCGCGGCCGGCGCC
GGCAACGCCGTCGACGCGCTCCACGCAGCGGGGGTAAGCGAAGTGACCGGGATCGACCTCGTGGACTTCCCGCCGCTCGT
CCGTCGCGCAGACCCCCATCGCCTCCCCTTCTCTGACGGCGCCTTCGATCTCATCTTCTCCGACGACCCGGCGGGGATCT
CCGGCGCGCTCTTCCCGGCTCGCGTCGCCGCGGAGGCCGAGCGCGCTGTTCGCCACGGAGGCGCCATCGCTCTCGCCGTC
GACCGGCAGCAGGACCCCGCCGCCGTCGCCGCGCTCTTCAAGAGGTCACGCGTCGTGGATACCAGGGCTGTCACCTTGGA
TGGCTCCCAGGTCAGGTTGCTAATTTTTTCAGAGTAATGGCACCACCCCTGAACCCGCGATGAGTTGTAATGGGGAGCAA
CTTCTTAAGAATGTAAGATAAGTCTAGATACAACCATTTCGAGGATAAATATTTCCGGACGAAGGGAGTAATTCTAATGT
TCATTATGTTGTTTATGTTAAGATCAAACACTAGTTTTTTCCGAGCTATGGATTTCTGCATCAGAATATAACTGTAACTG
TGTAGATGAATAGTTGAGAAAAATGAAAGATTGTTGCGGTGCCGGTTGCTTTAGCGATAATAAATTTCTAACATTCCCTG
AAAGTTCGATCCTTTTGCTGTGTTTGTTTTTCTAGCTATGACCATAGGAATTAGGATCAACATTTATCAATTCAATACAG
ATTTTGGGAATATATATACGTTCATAATCATATGCACCGCTTTGCGATTTTGCA-AACTTGTGCGCTTTTGATAGTTAGC
AAAAGGATCATGGTACTATAAATATTGATTTAGATACATATATACAGAAATGTGTGAGGAAGAT---ATGATCATTTATC
TACTGTACAAAATAGAGTGCTTCTATGC-TTGATGGAGTTTTTTCTTCTTCTGCAATTTAAAGCAAATTAATGGCTGTGA
TTAGAGGACTACTCCGCCGGTCTTGTTTTAAGAAAGGTTAGTTTG-GTTAGTTACAAACATTGGTATCCAGGTTCAAAGA
GGTGAAGACTAAAAACCCATGGGCAACCCATGTACGCACTTC---------------CCACAAGCACTTGTCTGAAAACT
ATCAGGTCCAATACCATAGTGGTGTACTAGTCTCCTTCGCCGGACTGCCTGGACTCTGAAGAGAAGACGATACCGGCTTG
CCGTGCATCCTAGCCCTCAGAAA--TCCCAAATTCCAAATTAAATTATTGTCCTTGACCTCCAATTTGATCATCATCCGC
ACCCGGAGCTCTCTGGCGCACAAATCCTAAACCTGGGTCATCTGCCCAAATGAGTCCTAATTATTGTACCATCCCAATGT
TCAATGTATTATCTCTACTCGTAAAGACGGACTTGGTAGCTTTTCCTTTACGTTTTTTTTTG--CCTCACCTCCCACCAC
CATCTATTTTCGTCTGTTTTTTTT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--S-----------------------------S-----S-S-------S-S-S------------------
-----------S---------------S----------------------------------------------------
----------------------------------------------------S------------S--------------
------------S-------------------------------------------------------------------
---------------------------------S------------------------------------S-S-----S-
-S-------------------------------------------S----------------------S-S---------
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------------------S-------------------------------------------------------------
-----------------------------------------------------S--------------------------
---S----------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
----S--------------S---------------------S--------------------------S-----------
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--------------------------------------S------------------------S----------------
------------------------S--------------------S-----------------S------S------SSS
----S------------------------S----------------------------------SSS--S----------
---------------------------SS----------------S--------S-------------------S-----
--------------S------S--S--------------------S-----------------S----------------
--------------------------------S-----------SSSSSS------------------------------
--------S-----------S--------S-----------S-----S------------------S-------------
-----------------------SS-------------------------------------------------------
-------S--S---------------------S-S---------------------------------------------
---------------------------------------------S-------S-------SSS----S-----------
------------------------
>forward_781
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-----------------------------------------CTACGTGGGGAATAGGACGC-------------------
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>reverse_2501
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--------------------TGTGTACTCATCTCCTTCGCC---------------------------------------
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