>input_sequence_70076
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-----------------------------------------------AAATATGTGGAGGCTGGCGCTGCGAATTCGGCC
CAAACAGGCCCAAAGGTATCACCAAATACCCGGGCTTCGGGTAC---CCACCCACCCGTATTCTTCCCCAAGCGAGTGGC
GCCCCTCTGGAATTGTTTTCTGTTTTCTCCTCCCCACAATGTCCATCTCCGGGAACGGCCACCTCCCAGC---CGCCGCC
TCCACCGGCCTGCCGGACCACTCCTCCGCCTCCGCCTCAGACTC---------CGAGGCCGAGGGAGACGCCGACTACCT
CCCCATCTCCGGCGCCGCGTCGGACACCGACAGCGACGCCGACCCCGACCCCGATCTCGCATCTCACCGCCGCCTCGACG
CGGTCGACAACGGCGTCTCCGAGCTGGATCTCGCCTCCGACGACGAAGAAGAAGAGAGCGACGAGGAAGAAGGCGCGGGC
GCGAGGGAGGCCGCGGCCTCCTTGGACGACGAGCGCCGGCGGCGCGCCCAGCTGCCCGCGGGCGCCGCGGCCCGGATCGT
GGACGCGATGCGTGGCGTGGCGTTCCCCGGCGCGCCGCCGCCGTGGGCCGGCACCGTCCCCGACGAGCAGTGGCTCGAAC
GCCTCAGCTCCCTCCGCGGCGGCCGCGACTAGACAGAGCAGATGAGGTGAATTCTCGACCCACAAATCACTGTGAGTTGT
GAGAGCTTGTGATCTGCCTTTGTACCGAAGGAACATTCCTCTGTCGCCATAGATCCGGTAGGATTGCCTCTCGCTTCTTC
GGAA----------------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G350700
GTATTTGAGAAGTAATTTGCTCAAGAACAAACAGGCCAGAGAAAGAATTGGCAGCAGTTGCCCATCAGCAGGTTTAAGAT
AGCAGTTAAAGATAAA-TGCAGAAATGTCATTGGAC----------------------------------AGATGCTTAC
ACTGTTTCTCTCGGCGCCAGGATCTAGCATACCAACACCATTTGCAGTTACTTGGAAAACAACCGAAATAAGCTGCAATT
ACAGTAGAGTATTCATGTCATCTGTACAAGCATAAATGAAGCAGAGGGTAACACGAGCATGGTTACCTCCTCCTCCATGA
GGATGTCATCGACATCGTAGTAACAAGGCATTTCACC-AAGTGGGACAGATCACTGTTGCTTATGCTCAG-CCCTGCATG
AACAGTTTGCACAATGCCGATGAGAGAAAGTCCAACTCACTCATCAGATTTGGCCTCCTATATTCATATACGG---AGTG
CTACTCTAAGGCTCCGTTTGA------------ATGTTGATATTGAGGGCCATGCAATTGAACTGGTGCCAATATCAAAT
CTCCCAGACATTGATC--TTGAAATTGAATCTGAA------TTGTGTTGTTTGGA--GGTTCAAGAAATGATACTTGGAA
CTCACATGAGAGACCCAATTC-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGTACAAA-------------
------AATAAGAACA-TTATACA----ACAGCAGCCGCCATGGGGTGAAGGCCATGGGGGCA-AGGGGGAAAGGCTCGG
TCG-----------CCATGGGGTCCCGACCGTGGGGGGTGAGGGGGGCGACGCGGAGGTCGCCATGAGAGGCAGGAGCCA
GCGGTGA------------------------CCGAGCCGCATCCGAGATGGAGGCCGCCGTCGCGAGGGGCAGATGGGGC
TACGCGTAACGCCGCAGAGAGGGGGAAAG-ACGGCCGGGGGCGGGGAGATGAGAGGAGGAGGGGGTGTCTGACCTGCGCC
GCCGTCGAGGCCTGCTTTCCGCCGCCGCTACTGGTCTCCTCCCGCGCTTTTCGCCTCTGTTTTTCGGGAGCGCGGGCGAA
GGGGGTCACCAAATATGTGGAGGATCTTCTAGGAA------AAAAACAAATATGTGGAGGCTGGCGCTGCGAATTCGGCC
CAAACAGGCCCAAAGGTATCACCAAATACCCGGGCTTCGGGTAC---CCACCCACCCGTATTCTTCCCCAAGCGAGTGGC
GCCCCTCTGGAATTGTTTTCTGTTTTCTCCTCCCCACAATGTCCATCTCCGGGAACGGCCACCTCCCAGC---CGCCGCC
TCCACCGGCCTGCCGGACCACTCCTCCGCCTCCGCCTCAGACTC---------CGAGGCCGAGGGAGACGCCGACTACCT
CCCCATCTCCGGCGCCGCGTCGGACACCGACAGCGACGCCGACCCCGACCCCGATCTCGCATCTCACCGCCGCCTCGACG
CGGTCGACAACGGCGTCTCCGAGCTGGATCTCGCCTCCGACGACGAAGAAGAAGAGAGCGACGAGGAAGAAGGCGCGGGC
GCGAGGGAGGCCGCGGCCTCCTTGGACGACGAGCGCCGGCGGCGCGCCCAGCTGCCCGCGGGCGCCGCGGCCCGGATCGT
GGACGCGATGCGTGGCGTGGCGTTCCCCGGCGCGCCGCCGCCGTGGGCCGGCACCGTCCCCGACGAGCAGTGGCTCGAAC
GCCTCAGCTCCCTCCGCGGCGGCCGCGACTAGACAGAGCAGATGAGGTGAATTCTCGACCCACAAATCACTGTGAGTTGT
GAGAGCTTGTGATCTGCCTTTGTACCGAAGGAACATTCCTCTGTCGCCATAGATCCGGTAGGATTGCCTCTCGCTTCTTC
GGAAATGAAATTCGTGCGCAGATCATCGCCGATGAGA--TCAGTGATCCACACTGGATGCTGTTCTTGTGTATGGATTTT
ATGGAGGTTTGGG--TTTTTTTCAGAGCGTGCTTGT---CTTGATTATGGAGAAATCCGAATGTTGTTGCTGCTGCTCTC
CGTGGGCATAAGCCTCGACGATATCTGCTCGGTCAGAAATGTGATCAAAAGGCTTGTGAAATTTTCAGTTGTATGAATCA
GCAAACGCTTAATTTGTTTGTGCCCTTGTTTGCTAGAATATGGAACAAACTCTGAACATTTCAATTCCATGTACC-----
--------ACAAAAGGTGATCATGTAATTGGTATTCACGGCAACAAGTGCACAGAAAGTGATCAAATAGTTGGTTTTCAC
TGCAGCAAATGCACAAAAAGTGATCATCTAATTGGTATTCATAGAAACAAGTATAGATTCAAGCACACATCTGCATCATC
GCAAAAACAGCACTCTTTCGAACACACTCAATGACAGGCAGATCGCCACTCCTACACCACAGGCAACGCC-GATATAAAC
ACCATGAACATTGCAAATAAAAATCA---AAATTTACCTCTGTACTATCCCAGAACCATGCGCGTGCTTCTTCCTTTTTG
CTGACGGGTGAATGGAATAGCTCTACTGCTAATTGTTTAAGACAGGCAAGTAAATAGAAGGGGAACCAACCTAGGACATG
AAC----ATGTTGTTTGCTGGAACACAACGTCACCAAGCAAAACTAAACCTTAAGCCCTGCATAAAATTCAGACAATCAT
GCC------------------------------------GTGTAAACAGAGAAAAGAATGCGCAAACGGGAACACATATT
ACATAGGAAGGTGAGGCCAAAAGATTGGGTTCTTCTTTCCACGCTTAGATGTGGTTTGCGTTAATAATTATTAAAAGAAA
GTAAATTTTGTTTTCTAACTTATAAAAGAAACTGTAGTCGATGAATCAGCTAATACACAATGAGGTCTTGTTCCAGTTTG
ATGTACCTAATTGGAATACATAACTAAT
>chr1A_1
GTATTTCATAAGTAATTTGCTCAAGAACAAACAGATCAGAGAAAGAATTGGCAGCAGTTGCCCATCAAC-----------
AGCAGTTAAACATATA-TGCACAAATGCCATTGGAT----------------------------------AGATGCTTAC
ACTGTTTCTCTCGGCGCCAGGATCTAGCATACCAACGCCATTTGCAGTTACTTGGAAAACAACCGAAATAAGCTGCAGTC
ACAGTAGAGTATTCATGTCATTTGTACAATCATAAATGGGGCAGAGGATAACACGAGCATGGTTACCTCCTCCTCCATGA
GGATGTCATCAACGTTGTAGTAACAAGGCATTTCGCC-AAGTGGGACAGGTCGCTGTTGCTTACTCTCAACCCCTGCATG
AACAATTTGCACTATGCCGGTCAGAGGAAGTCCAACTCACTCACCAAATTTGGTCTCATATATGGGGTA----------A
ATACTCTAATGCCCCGTCTGGA---------------TGATATCGAGGGCCATGGAATTGAATTGGTCCCAATACCAAAT
CTCCCGGGCATTGATA--TTGAAAATGAACCTGAA------TTATGTTGTTTGGAT--GTTCAAGAATTGACACTTGGAA
CTCACATGAAAGACTCAATTCTGAATGTTGTTTGGATTTTTCTTGTCCAGATTGGAATTGCTCATTTTTAATAGGATGAA
CATTGTACTATGAT--------------------------------GTAATGTTTAAAACTAACTTGTATGCAAGTATGC
AACATGTGAATATAGTTGTGAAGGAT--TACATATCAAGAACACAACAGCAGCAGCACATATACAAA-------------
------AACAACAGCACTTGTACA----ATCGCAGCCGCCACGGGGTGCCGGCCACGGGGGGCAACCGGGTAAGGGGAGC
AGGACAAGCGGCTCCCATGGGGTCCCGGCCGTGGTGGGTGAGGGGG-CGACGCGGCGGTC---------GGCACGAGGCA
GCGGCCGGCATGGGCT-TCTGGCCGTGGTGGACAAGCCGCATCCGAGATGGAGGCCGCCGTCCCGAGGAACAGATGGGGC
AACGCGTAACGCCGCAGAGAGGGAGAAAGGCGGGGGACGGGCGGAGAGATGAGAGGAGGAGGAGGAGGCTGACCTGCGCC
GCCGTCGAGGCCTGCTTCCCGCCGCCGCTACCCGTCTCCTCCCGCGCTTTTCGCTTCTGTTTTTCGGGAGCGCGGGCGAA
GGGGATCGCCAAATATGTGGAGGATCTTCTAAA--------------AAAAATGTGGAGGCTGGCACTGCGAATTCGGCC
CAAA-AGGCCCAAAGGCATCACCAAACATCCGGGCTTCGGGTAC---CCACCCACCCGTATTCTTCCCCAAGCGAGTGGC
GCACCTCTGGAATTGTTTTCTGTTTTCTCCTCCCCACAATGTCCATCTCCGGGAACGGCCACCTCCCCGC---CGCCGCC
TCCACCGGCCCACCGGACCACTCCTCCGCCTCCTCAGACTCTGAGGTTGAGGTCGAGGTCGAGGGAGACGCCGACTACCT
CCCCATCTCCGGCGCCGCGTCGGACAGCGACGGCGACGCCGACCCCGACCCCGATCTCGCATCTCGGCACCGCCTCGACG
CGGTCGACAACGGCGTCTCCGAGCTGGATCTCGCCTCCGATGACGAAGAA------AGCGACGAGGAAGAAGGCGCGGGC
GCGACGGAGGCCGCGGCGGCCTTGGACGACGAGCGCCGGCGGCGCGCCCAGCTGCCCGCGGGCGCCGCGGCCCGGATCGT
GGACGCGATGCGCGGCGTGGCGTTCCCCGGCGCGCCGCCGCCGTGGGCCGGCGCCGTCCCCGACGAGCAGTGGCTCGAGC
GCCTCCGCTCCCTCCGCGGCGGCCGCGACTAAACAGAGCAGATGAG-----TTCTCGACCCACAAATCACTGTGAGTTGT
GAGAGCTTGTGATCTGCCTTTGTACGGAT-GAACATTCCTCTGTCGCCATAGATCCAGTAGGATTGCCTCTCGCTGCTTC
GGAAATTCAATTCGTGTGCAGATCATCGCCGATGAGGTCTCAGTGATCGACACTGGATGCTGTTCTTGTGTATGGATTTT
ATGGCGGTTTCGTCTTATTTTTCAGAGCGTGCTTGTCTTCTTGATTGTGGAGGAATCCGAATGCTGTTGCTGCTGCTCTC
CGTGGGCAT---------------------------AAATGCGATCAAAAGGCTTGTGAAATTTTCAGTTGTATGAATCA
GCAAACGCTTTATTTGTTTGTGCCCTTGTTTGCTAGAGTATGGAACAGACTCTGAACATCTCATTGCCATGTACTCCAGA
GGAGTAGTACAAAAAGTGATCATGTAATTGGTATCCACGGCAACAAGTGCAGAGG-------------------------
-----------------AAGTGATCATCTCATTGGTATTCATGGAAACAAGTACAGATTCAAGCACAGATCCGCATCATC
GC-AAAACAGCACTCTTTCGAACACAATCAATGATAGGCAGATCGCCACGCCTACACGACAGGCAACGCCCGATGTAAAC
GCCGAGC--------------TAGAAATTAAACTTAGCTCTATGCTATCCCAGGACCAAGCTCGTGCTTCTT---TTTTG
CTGACCGGCGAATGGACTAGCTCTACTGCTAATTGATCAAGACAGGCAAGTAAATAGAAGGGAAACCAACCTATAGGACA
AATGATTATATTGTTTGCTGCAACACAACATCACCAAGCAAAACAAAACCCTAAGACCTGCATAAAATTCAGACAATCAT
GGCATGTATATTATTCGCAAATAAAAAAAATCATGCCATGTATAAACAGAGAAAAGAATGTGCAAACGGGGACACATATT
ACATAGGAAGGTGAGGCCAAAAGATTGGGTTCTTCTTTTCATGCTTAG--------------------------------
--------------------------------------------------------------------------------
----------------------------
>chr3A_1
GTATTTGAAAAGTAATTTGCTCAAGAACAAACAGATCAGAGGAAGAATTGGCAGCAGTTGCCCATCAGCAAGTTTAACAT
AGCAGTTAAACATAAA-TACACAAATGCCGTCGGACAGATGCTTACAGTCTTACACTAAGGGTCAAAAAAAGATGCTTAC
ACTGTTTCTCTCGGCACCAGGATCTAGCAGACCGACGCCATTTGCAGTTACTTGGAAAACAACCGAAATAAGCTGCAATT
ACAGTAGAGTATTCATGCCATCTGCACAAGCATAAATGAACCAGAGGATAACACGAGCACGGTTACCTCCTCCTCCATGA
GGATGTCGGCAACGTCGTAGTAACAAGGCATTTCGCC-AGGTGGGACAGGTCACTGTTTCTTATTCTCAACCC-TGCATC
AACAATTTGCAGTATGCCGATGAGAGAAAGTCCAACTCACTCACCAAATGTGGCCTCCTATATAT---------------
------TAAGGCTCCATTTGGATGTTGATGTTGATGTTGATATTGAGGGCCATGGAATTGAATTGGTCCCAACATCAAAC
CTCGCAGACATTGATA--TTGAAATTGAACCTGAAACTGAATAATGTTGTTTGGATGTGTTCAAGAACAGACACTTGGAA
TTCACATGAGAGACTCAATTCTGAATATTATTTGGATGATCGTTGTCAAAA-TGGAATTGCTCATTTGTAATAGGATGAA
TATTGTACTTTGAATATAAACGCTCTTATATTTCTCTACAGAGGGAGTAATGTTTAAAACTAACTTGT--------GTGC
AACATGTGAATATC--TGTGGAAGGT--TATATGTCAAGAATACAACAGCAGCA---CTTGTACAGA-------------
------AATAACAGCACCTACACTACACACAGCAGCCGCCATGGGGTGCCGGCCATGGGGGGCGAGGGGGAAAGGCTCGG
TCG-----------CCATGGGGTCCCGGCGGTGGTGATCA---------ACGCGGCGGTCGCCATGAGTGGCAGGAGGCA
GCGGCCGGCATGGGCT-GCTGGCCGTGGTGGCCGAGCCGCATCCGAGATGGAGGCCGCCGTCGTGAGGGGCAGACGGGGC
AACGCGTAACGCCGCAGAGAG----AAAGGAGGGGGGTGGGCGGGGAGACAAGAGGA-----------------------
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>chr1B_6
-----TGAGAAGTAATTTGCTCAAGACCAAACAGACCAGATAAAGAATTAGCAGCAGATGCCCATCAGCAGGTTTAACAT
AGCAGATAAACATAAAATGCACAAAAGCCGTTGG------------------------A----------AAGATGCTTAC
ACTGTTTCTCTCAGCGCCAGGATCTAGCATTCCAACACCATTTGCAGTCACTTGGAAAACAACCGAAATAAGCTGCAATT
ACAGCAGAGTATTCATGTCATTTGTACAAGCATAAATGAAGCAGAGGGTAACACGAGCATGGTTACCTCCTCCTCCATGA
GGATGTCATCAACGTCGTAGTAACAAGGCATTTCACC-AAGTGGGACAGATCACTATTCCCAACCCTGCA----TGCAGG
AACAATTTGCACTGTGCCAATGAGAGAAAGTCCAACTCACTCAACAAATTTGGTTTTCCATATTCTCATGTGG---AGTA
ACATTCTAAGGCTCCGTTCGGA------TTTTGATATTGA---------------AAGTGAATTTGTCCCAATATCAAAT
CTCCCAGACATTGATAATTTGATATTGAAACTGAAACTGAACTCTGGTGTTTGGA--TGTTCAAGAACTGACACTTGGAA
TTCACATGAGAGACTCAGTTCGGAAT----------------------------------------------AGGATGAA
CATTGTACTTTGAT--------------------------------GAAATGTTTAAAACTAACTTCT--------ATGC
AACATGTGAATTTATTTATGAATGGTTATATACATCAAGAACACAACAACAGCA---CTTATACAAACAGCGGCACATAT
ACAAAGAAAAACAGCGCTTGTACA----ATAGCAGCCGCCATGGGGGTGCCGGCCACAGGGGCAAGGGGA----------
--G-----------CCATGGGGTCCCGGCCGTGGTTGGTGAGAGGG-CGACGCGGCGGTCGCCATGAGTGGCGCGAGGCA
GCGGCCGGCATAGGCTCTCTGGTCGTGGTTGCCGAGCCGCATCCCAGATGGGGGCCGCCGCCGCGAGGGCCAGATGGGGC
GACGCGTAACGCCGCGGAGAGGGAGAAAGGCGGGGGGCGGGCGGAGAGA----AGGAAGATGGGGAGGCTGACCTGCGCC
GCCGTCGAGGCCTGCTTCCCGCCGCCGCTGCCCGCCTCTTCCCGCGCGCTTCGCTTCTGTTTTTCGGGAGCGCGGGCGAA
GGGGATCGACAAATATGTGGAGGATCTTCTAGAAACAAAAAAAAAACAAATTTGTGGAGGCTGGCGCTGCGAATTCGGCC
CAAACAGGCCCAAAGGCATCACCAAATATCCGGGCTTCGGGTGCCCACCACCGACCCGTATTCTTCCCCGAGCGAGTGGC
GCACCTCTGGAATTGTTTTCTGTTTTCTCCTCCCCACAATGTCCATCTCCGGGAACGGCCACCTCCCCGCCGCCGCCGCC
TCCACCGGCCTGCCGGACCACTCCTCCGCCTCCGCGTCAGACTC---------CGAGGCCGAGGGAGACGCCGACTACCT
CCCCATCTCCGGCGCCGCCTCGGACACCGACAGCGACCCCGACC------CCGATCTCGCATCTCACCGCCGCCTCGACG
CGGTCGACAACGGCGTCTCCGAGCTGGATATCGCCTCCGACGACGAAGAA------AGCGACGAAGAAGAAGGCACGGGC
GCGACGGAGGCCGCGGCCTCCTTGGACGACGAGCGTAGGCGGCGCGCCCAGCTGCCCGCGGGCGCCGCGGCCCGGATCGT
GGACGCGATGCGCGGCGTGGCGTTCCCCGGCGCGCCGCCGCCCTGGGCGGGCGCCGTCCCCGACGAGCAGTGGCTCGAGC
GCCTCCGCTCCCTCCGCGGCGGCCGCGACTAGACAGAGCAGATGAG-----TTCTCGACCCACAGATCACTGTGAGTTGT
GAGAGCTTCTGATCCGCCTTTGTACTGAAGGAACATTCCTGTATCGCCATAGATCCAGTAGAATTGCCTCTCGCTGCTTC
GGA-ATGAAACTCGTGCGCAGATCATCGCCGATGAGATC--AGTGATCAACACTGGACGCTGTTCTTGTGTATGGATTTT
ATGGAGGTTTGGT-TTTTTTTTCAGAGCGTTCTTAC---CTTGATTGTGGAGAAATCCGAATGCTGCTGCTGCTGCTCTC
CGTGGGCATAACTCTCGACGATATCTGTGCGGTCAGAAATGCGATCAAAAGGCTTGTGAAATTTTCAGTTGTATGAATCG
GCAAACGTTTAATTTGTCTGTGCCCTTGTTTGCCAGAATATGGAACAAACTCTGAACAT---------------------
------GTACAAAAAGTGATCATGTAATTGGTATTCACAGCG--------------------------------------
---------------AAAAGTGATCATCTAATTGGTATTCATAGAAACAAGTACAGATTCAAGCACACGTCCGCATCATC
AGAAAAACAGCACTCTTTCGAACACACTCAATGATAGGCAGGTCGCCACTCCT---CCACAGGCAACGCC-GATATAAAC
GCCATGAACATTGCAAATAAGTAGAAATCAAATTTAGCTCTGTACTATCCCAGAACCATCT-------------TTTTTG
TTGACGGGTGAATGGAATAGCTCTACTGCTAATTTATTGAGACAGGCAAGTGAG--------------------------
------TATATAGTTTGCTGGAACACAACATCACCAAACAAAAC-----CTCAAGACCTGCATAAAATTCAGACAATCAT
GCC------------------------------------GCGTAAG----------------------------------
-CATAGGAAGTTGAGGCCAAAAGATTGGGTTCTTCTTTCCATGC-TAGATGTGGTTCACATTAATAATTATTAAAAGAAC
ATAAATTCGTTTTCTACCG--ATAAAAGAAACTGTAATCG----------------------------------------
----------------------------
>chr3B_26
-------------------------AACAAATATGGCAGAGGAAGAATTGGCAGCAGTTGCCCATCAGCAGGTTTAACAT
AGCAGTTAAACATAAA-TACACAAATATCATTGGACAGATGCTTACACTTAGCGTAAAA----------AAAATGCTTAC
ACTGTTTCTCTCGGCGCCAGGATCTAGCAGACCAACGCCATTTGCAGTTACTTGGAAAACAACCGAAATAAGCTGCGATT
ACAGTAGGGTATTCATGCCATCTGCACAAGCATAAATGAAGCAAAGGATAACGCGAGCACGGTCACCTCCTCCTCCATGA
GGATGTCGGCAACGTCGTAGTAACAAGGCATTTCGCCCAAGTAGGAAAGATCACTGTTTCTTATTCTCAACCC-TGCATG
AACAATTTGCAGTATGTCGATGAGAGAAAGTCCAACTCACTCACCAAATTTGGCCTCCTATATCCTCATGTGTAGTAGTA
ATATTCTAAGGCTCCATTTGGA------TGTTGATGTTGATATTGAGGGCCATGGAATTGAATTGGTCCCAACATCAAAC
CTCGCAGACATTGATA--TTGAAATTGAACCTGAA------TAATGTTGTTTGGATGTGTTCAAGAATAGACACTTGGAA
TTCACATGAGAGACTCAATTCTG---------------------------------------------------------
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>SNPs
-----------------------------------------------------------------------------S--
----------S----------S----------------------------------------------------------
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----------S--S--------------------------------------------------S----S----------
----S-------S------------------------------S--S------------------SS--SS--------S
S-------------------S---------------------------------S-------S----S------------
---------------S-------------S-------------S-------------S---------S---S--------
--------------S-----------------------------------------------------------------
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-----------S-S----------------------------------SS-----------SS-----------------
---------------------------S------S-----------S--------S------------S--------S--
----SSS-------------------------------------------------------------------------
S----------------------S-------S--SS-S---------------------------S-S------------
-----------------S-------------SS---------------------S-------------------------
----S--S------------------------S-----------------------------------------------
----------------S-----------S---------------------------------------------------
--S----------------------------------------------------------------S------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSSSSS------------------------
----S---------------------------------------------------------------------------
------------S---------------------------------------S-------------------------S-
-----S----------------------------------------SSSSS-----------------------------
-------------------------S------------------------------S------------------S----
------------------------------------------------S-------------------------------
------------S---------------------------------S----------------S----------------
-----------SS--------------SS------------S--------------------------------------
-----------------------------------------------------------S---S-S--------S-----
--------------S------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS--------------------------------------S-----------------S--------
----------------------------------S---------------------------------------------
S-------------------SS-SS-----------S------------------------S----------SS------
-----------------------------------S--------------------------S----------SSSS-SS
--S------S-------------------S--------------S----------S------------------------
------------------------------------------------------------S---------S---------
-----------------------------------------S--------------SS-S-------------------S
S------SSS---SSSSSSSS---------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_543
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-------------------------------------------TGAGGGCCATGCAATTGAAC-----------------
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>reverse_1734
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-----------------------------------------------------GAGAGCGACGAGGAAGAAGG-------
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>forward_1186
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----------------------------------------------AGATGAGAGGAGGAGGGGGT--------------
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>reverse_2253
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------------CCTCGACGATATCTGCTCGG------------------------------------------------
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