>input_sequence_70028
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----------------------------------------GCACAAAACCAACTCACACATACTTGCTCCCAGTGCTGAG
GAGTAACATATCGACAAGAAGTGCAGAAACAATGAGACCAGGAGCAGGTTTCAATGCGACGGCGGCAGCAACGAACGCTG
CGGTAGCTCCTCTGGCCGCCGGCGCCGCGCACTCCGCGTGGCACTCGCCGGTGCCGTACCTCTTCGGTGGCCTGGCCCCG
ATGCTCGGACTCATCGCCTTCGCCCTTCTCATCCTCGCCTGCTCGTACTGGAAGCTGTCCGGGTACCTGGAGGGCAGCGC
CGGCCGCGGTGACGAGGAAGGTTCCGCCACCGACGGCGCCAAGCCGGTGGCGTCGGACCTGCCACCAGCAGCGTGGGAGG
AGAAAGTACTGGTGGTCATGGCCGGCGACGTGAAGCCGACGTACCTGGCCACGCCCATGTCAAGCAGAGACCGTAGCAGC
AAGGGAGAAGAGGAAGAGAAGAAGGTGTCCATGGCCGCCATGGCTAGCACCAAGGATGCTGGTAATAGTGAGCACAGTCA
GAATCGGAGAGAACGAGATGACCACCACCTCCCCTAGGTGTGAGTTTTGCAC---------CCTGTTCCTTTTTAGGCTT
AGGTGAGCTGGCGGTGAAGCCTTTTGATTCTTCC-----AAATAGGAGAAAGTTCATCTGCAGTTCTGGACTATGCAGGG
AGAGCGTAACCCCGGTCAGAGCCATGTTTTTCGTGGGGTTCTTCAATTTTCGCAATGACCAAATGGATTAGATCGGCA--
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>chr4B_1_TraesCS4B01G081100
ACGAGGAGAGAAGCGCATCGCCTTCCCCTGCGTCGCCCGAGCCAGGCTCGTGAGCTACTGCCAATTTGGGCGTTTGCCCT
GGGCATGGCCTGGAGGTGCTTTAAGATTCATGCCATGCGCGCCGCACAGTAAACGCAGGCAACCAAACGGACCACTTTCT
TTCCGCGTGGGCCAGGCTAGGCCATATGCAGGCAACCAGACACGACCGTAGTGACAACGTTCAGCTACAACTACTTTGTA
CACGGGGACGGGTTTGAAGCGCTTCCTTTAGCAATTTCATCTTTGCTATGACAAATTCGTTTTGATCCTTGGGGACATCT
GGCATCAGAGAAACGAATGCACCTTCAGGCAAAAGAGTGCAAGCATGACTGAAGTTTTGGCAAGCATCACAAGGACTGTG
GAACTGTGGCGCCAAGCAGGAGCAACACACCTGGAGCACCCTTTCTGGGATCCTCCATGAGAGAACAACCTGCTCTGAAC
TAGCAACGGCTAGTTTTTTTCTGGCCTGTTTTTTGCCTTCTTCCTTTTTAATCCTTGATCGCAAGATCGAACTCCACCTT
GTGTTTTTTCCCGCCTGCTCCCTGCTATGAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGCTTCGCTACG
CTCCCACACCGTTACGCCAAGCAACAACCAGTCAAGAACAGCACAAAACCAACTCACACATACTTGCTCCCAGTGCTGAG
GAGTAACATATCGACAAGAAGTGCAGAAACAATGAGACCAGGAGCAGGTTTCAATGCGACGGCGGCAGCAACGAACGCTG
CGGTAGCTCCTCTGGCCGCCGGCGCCGCGCACTCCGCGTGGCACTCGCCGGTGCCGTACCTCTTCGGTGGCCTGGCCCCG
ATGCTCGGACTCATCGCCTTCGCCCTTCTCATCCTCGCCTGCTCGTACTGGAAGCTGTCCGGGTACCTGGAGGGCAGCGC
CGGCCGCGGTGACGAGGAAGGTTCCGCCACCGACGGCGCCAAGCCGGTGGCGTCGGACCTGCCACCAGCAGCGTGGGAGG
AGAAAGTACTGGTGGTCATGGCCGGCGACGTGAAGCCGACGTACCTGGCCACGCCCATGTCAAGCAGAGACCGTAGCAGC
AAGGGAGAAGAGGAAGAGAAGAAGGTGTCCATGGCCGCCATGGCTAGCACCAAGGATGCTGGTAATAGTGAGCACAGTCA
GAATCGGAGAGAACGAGATGACCACCACCTCCCCTAGGTGTGAGTTTTGCAC---------CCTGTTCCTTTTTAGGCTT
AGGTGAGCTGGCGGTGAAGCCTTTTGATTCTTCC-----AAATAGGAGAAAGTTCATCTGCAGTTCTGGACTATGCAGGG
AGAGCGTAACCCCGGTCAGAGCCATGTTTTTCGTGGGGTTCTTCAATTTTCGCAATGACCAAATGGATTAGATCGGCAAT
CAAGGTCATGTTTTTGTGGATTTATCTCTAACTTTTCCCATAATGGGAGTGGAATTACAGCATGAGAAATGCAGCTTTTG
ATAAT---CTTTTTGTCGCCTGAGAAATAGTTGGTGCTCTATTTCCTTTCCTTTTGTTTTCTTGCCTTGAGTAATGGAAA
TGGGCATATTTTTCTTCTTTCTTCCCTTCCTTTCTATCGTGGCCAATAGACCCCGTGTGTGTGTGT--------------
----------------AGGAATCAGCAGGTAGGGCACACACTTCGCATGTA-------TGAGCAAATCAAGGGCAAAGTG
GATGGGAGTTAATCGTTTCC----GGCAGGACAGGACGCGGTGCGTCGATGGGCATACTTCTCATGATTGCGAATATATG
ATAGGATCAGCCGATCAGGGGGTACTCTCACTCTCAGGAGAGGAGACTTGCTTGCGCTGTTTGTTTCCT--------TGT
GGCCAATATTGTTTTCAGGATATCCAGAGTCAGCCAATCTTGGGAGACAGGGCCTAGTGAGCAGATTCTTGAAGACGATG
TAAGACATCCTCCATGATGTGAACTGTTGACCTGCACCAGTCACTAGGAGTC--TAGGATGAATGTATGCTGCTATCACC
AGGGGTATGATTAGTGCTTGGAACGATACCTTGGCGCCCAGACCAAACCACGTCTACAAAAGTTTGAAACGGCCGCCGGT
GGCCGGAGGCGTGCTGATTCTGTTAGATGCTTTTGGGTTAGGTCGTGGCAAAAAAAAATGTCAATAGGAGTAGGTCGTGG
CAAAAAAAATTGGACATTCGAGTAGGTCGTGGCAAAAAAAAAACAGGTCTGTGAGAAACATTTGAAAATAACATTGTTCA
CGCCCAAATTTGTCTTTTTTGCCACACGCTCCTCGAATGTCCAAATTTCACCAAATTTTGCACGAATGTCACGCAAATGG
ACATCTTGCTTGCAAAAAAAACAGATTTTTTATTGGACTGTGCTAACCACCAGTCGACTGGTGGTTAGCAACAGATCCGG
ACGACCTTCGAT
>chr4D_947
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------------------------------------------------------------------AACGCTTCACTACG
CTCCCACACTACTACAGCAAGCAACAACCAGTCAAGAAGAGCAGAAAACCAAC-CACACATGCTTGCTCCTAGTGCTGAG
GAGCAACATATCAACAAGAAGTGCAGAAACAATGAGACCAGGGGCAGGTTTCAATGCGACGGCGGCAGCAACAAAGGCTG
CGGTAGCCCCTCTGGCCGCCGGCGCCGCGCACTCCGCGTGGCACTCGCCGGTGCCGTACCTCTTCGGTGGCCTGGCCGCG
ATGCTGGGACTCATCGCCTTCGCCCTTCTCATCCTCGCCTGCTCGTACTGGAAGCTGTCCGGGTACCTGGAGGGCAGCGC
CGGCCGCGGTGACGCCGAAGGTTCCGCCACCGACGGCGCCAAGCCGGTGGCCTCGGACCTGGCGCCAGCAGCGTGGGAGG
AGAAAGTACTGGTGGTCATGGCCGGGGACGTGGAGCCGACGTACCTGGCCACGCCCATGTCAAGCAGAGACCGTAGCGGC
AAGGGAGGAGAGGAAGAGAAGAAGGTGTCCATGGTCGCCATGGCTAGCACCAAGGATGCTGGTAATGGTGAGCACAGTCA
GAACCAGAGAGAACGAGACGACCACCACTTCCCCGAGGTGTGAGTTTTGCAT---------CCTGTTCCTTTTTAGGCTT
AGGTGAGCTGGCAGTGAAGCCTTTTGATTCTTCC-----AAATAGGAGAAAGTTCATCTGCAGTTCTGGACTATGCAGGG
AGAGCGTAACCCCGATCAGAGCCATGTTTTTCGTGGGGTTCTTCAGTTTTTGCAATGACCAAATCGATTAGATCAGCAAT
CAAGGTCATGTTTTTGCGGATTTATCTCTAACTTTTGCTATAACGGGAGTGGAATTAGAGCATGAGAAATGCAGCTTTTG
ATACCAAGCTTTTTGTTACCTGAGAAATAGTTGGTGCTCTATTTCCTTTCCTGTTGTTTTCTTGCTCTGAGTAATGGAAA
TGAGCATATTTTTCTTCTTTCTCCCCCTGCTTTCTATCGTGGCCAATAGGCCCCGTGTGTGTGTGTGTGTGCGCGTGTGT
GTGTGTGTGTGTGTGGAGGAATCAGCAGGTAGGGCACACACATGGCATGTA---CGTATGAGTAAACCAAGGGCAAAGTG
GATGGGAATGAATCGTTCGTTTCAGGCAGGACAGGACGCGGTGCGTCGATGGGCATACTTCTCATGATTGCGAATATATG
ATGTGATCAGGGGGGTG-------------CTCTCAGGAGAGGAGACTTGCTTGAGCTGCTTGTTCCCTTGTGGGCTTGT
GGCTAATATTGTTTTCAGGATATCCTGAGTCAGCCAAACCTGGGAGACAGGGTCTAGTGAGCAGATTCTTGAAGACGATG
TAAGACATCCTCCATGATGTGAACTGTTGACCTGCACGCATCACTAGGAGTC--TAGGATGAATGTATGCTGCTATCACC
AATGGTATGATTAGTGCTTGGAACGGTACCTTGGCGCCCAGACCAAACCACGTCTACAAAAGTTTGAAACGGCCGCCGG-
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>chr4A_947
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------------------------------------------------------------------AACGCTTCAGTACG
CTCCCACACTATTACACCAAGCAACAACCAGTCAAGAACAGCAGAAAACCAACTCACACATACTTGCTCCCAGTACTGAG
GAGCAACATATCAACAAGAAGTGCAGAAACAATGAGACCAGGGGCAGGTTTCAATGCGACGGCGGCAGCAACGAAGGCTG
CGGTAGCCCCTCTGGCCGCCGGCGCCGCGCACTCCGCGTGGCACTCGCCGGTGCCGTACCTCTTCGGTGGCCTGGCCGCG
ATGCTCGGACTCATCGCCTTCGCCCTTCTCATCCTCGCCTGCTCGTACTGGAAGCTGTCCGGGTACCTGGAGGGCAGCGC
CGGCCGCGGCCACGACGAAGGTTCCGCCACCGACGGCGCCAAGCTGGTGGCCTCGGACCAGGCGCCAGCAGCGTGGGAGG
AGAAAGTACTGGTGGTCATGGCCGGGGACGTGGAGCCGACGTACCTGGCCACGCCCATGTCAAGCAGAGACCGTAGCAGC
AAGGGAGAAGAGGAGGAGAAGAAGGTGTCTGTGGTCGCCATGGCTAGCATCAAGGATGCTGGTAATGGTGAGCACAGTCG
GAACCAGA------------------------------TGTGAGTTTTGCATCCTGTAACTCCTGTTCCTTTTTAGGCTT
AGGTGAGCTGGCCGTGGAGCCTTTTGATTCTTCCAAACAAAATAGGAGAAAGTTCATCTACAGTTCTGGACTATGCAGGG
AGAGCGTAACCCCGA-----GCCATGTTTTTCGTGGGGTTCTTCAATTTTTGCAATGACCAACTGGACTAGATCAGCAAT
CAAGGTTATGTTTT----------------------------------GTGGGATTACGGCATGAGAAATGCAGGTTTTG
AT---AAGCTTTTTGTCACCTGAGAAATAGTTGGTGCTCTGTTTCCTTTCCTTTTGTTTTCTTGCTCTGAGTAATGGAAA
TGAGCATATTTTTCTTCTTTCTCCCCATGCTCTCTATCGTGGCCAATAGGCCCCGTGTGTG-------------------
-----------TGTGGAGGAATCAGCAGGTAGGGCACACACATGGCATGTACTACGTATGAGTAAACCAAAGGCAAAGTG
GATGGGAATGAATCGTTCGTTTCAGGCAGGACAGGACGCGGTGCGTCGATGGGCATACTTCTCATGATTGCGAATATATG
ATGTGATCAGAGGGAT-------------ACTCTCAGGAGAGGAGACTTGCTTGAGCTGCTTGTTTCCTTGTGGGCTTGT
GGCCAATATTGTTTCCAGGATATCCAGAGTCAGCCAAACCTGGGAGACAGGGTGTAGTGAGCAGATTCTTGAAGACGATG
TAAGACATCCTCCATGATGTGAACTGTTGACCTGCACGTATCACTAGGAGTCTATAGGATGAATGTATGCTGCTATCACC
AACGGTATAATTAGTGCTTGGAACGGTAGCATGGCGACCAGACCAAACCACGTCTACAGAAGTTTGAAACGGCCGCCGGT
GGCCGGAGGTATGCTGATTCTATTAGA-----------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----
---------SS----S---------------------------S------------------------------------
---S--------S-----------------------------S--------------------------------S----
-------S---------------------------------------------------------------------S--
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---------------S-----------------------------------S---------S-S----------------
-------------------------S------S-----------------------------------------------
----------------------------------S-------------------------------S-------------
---S-S------------S---------S-----S----------------S----------------------------
------------S-------------------------------------------------------------------
--------------S-----------------------------------S-----------------------S-----
----------------S-------------------S-S----S------------------------------------
---SS------------S-----------------------------------------------SS-------------
--S-------------------S---S-S--------------------S------------------------------
-----------------------------------------S-S------------------S---S-------------
-------S-S-------SSS------------------------------------------------------------
--SS------SS-SSSSSSSSSSSSSSSS-------------------------S----S--------------------
-------------------------------------S-S------------S---------------------------
-------------------------------------SSS----------------------------------------
-SS----------------------S------------------------------------------------------
---------SS----------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS
>forward_149
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-------------------------------------------------TAAACGCAGGCAACCAAACG-----------
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>reverse_2171
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----------CCGATCAGGGGGTACTCTCA--------------------------------------------------
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