>input_sequence_69989
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-------------------------------------------------------------GCATATAT-ACATCCACCC
AAGCCATGTCCAGGCTGACTCGACGTCGCCATGTCATCGACGAGAGCGCGGCGGAGCGGCGGCCGGCAGTTCGCGGCGGG
CGGCCGGTGGCGGCACGTGGCGGTGGTGGACACGGGGTGCCGGTGCCGCCCGCGCCGCCCGAGGCTGGCGTCCTTCCTCT
GGCCGTCCACGAAGCCGCCGGTGACGAGGAGCAGCAGCAGCTCCCATCCGTCATCCTTCGTCCCCTCCTCC---------
---------------------GCCTCCGCCCACGTCTACAAGCACCACCAGGAGCC---------CTACGGGGTGACGGC
AAAGGCGTCGGCGCTGG------------TTGCGGCGAAGAAGGTGGGCAGCAATCCGGCGAAAAAGAGGCCCGAGAAGA
TGGCG---GCGGCGGCC------GAGGAGGAGGAGGTTGGGGTGGCGGTGGAGAAGGAGTCGTCGGATCCGCGGGCCGAC
TTCCGTGACAGCATGGTGCGGATGGTGGTGGAGATGGGGCTCTGCGACTCGGACGGCCTCCGCTCCATGCTTCGCCGCCT
GCTCGCCCTCAACGCGCCGCGGCACCACGCCGCCATCCTCGCTGCCTTCGCCGAGGTCTGCGCCCAGCTGG------CCT
CGGAGTCTCCAGCGCCGCCGCCTCCGGCGTATCAAT----AC-------ACGAGTGACGAGTGACCATTCGTCGGCTCGG
CAAGCCGGCCGGCCAGGTCG-----TCTGCTCGTGTT---TCTGTTCTGTGTGG-GACTCGGTCCCGAGATCCTGGCACC
ACCT-GGTGTACAC------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G395100
GTACCAATGAACATCGTGCAAGCACCCGTCAGCTCCCCACCCGGCGTCTGTGTCCTCTCCGAGAAAAGCAACGGCGCCAC
GTAACGTTGATGAAGAAA-GGCACTTGCCCGGCGATGGTTGTCGTGGACTGCCCACCCGAGCTGCTTGGCGGCGTAGAAA
TACGGAGCCTTATAATGCTCCGGCCATGACGGCGTTTATACGGGCGGTGACGGTAG-G-GGCCCCGCGGCTCAGGCCCCA
ACCTTCACCATGTTT-GCGACCAGCATGCCCACCGCCACGTCCGCTACCAGCACGCCCTCCGTCGGCCTTCTGCATCTTG
AGTGTTTCCGCCTTTGT---------TTTGACACC---------------------------------------------
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------------------------------------------------ATGATTTCACGGTGTCGCCGAGTTGATCTTTC
-GAACGAGTGTAATGCTCGGATCCTCCACCACCTTCGTCTCCGGCAGGTTCTCCTCCGGGTCCATGTGTCTGCGGCGCGA
GGGAAGAAGAGAGTGGGCGAA-AAAAAACATGAATTGGATGGAGAGCGTTGGGATAAAAAGGG-GAGCGGT-GGATTTTG
CCGCGAAAACAGTGCGACCAATTACAAAAGCGCACGTTTCGTTTTAATTTTGGGC------------TCGGAGTCCTACA
TGACTCATATCCGAACTCCCGCAAAGCCTCTGGGTTGGTTCTGGTTTG--CAGGAATTTGTGGACTGAACTGCTTCGCGA
ACCGATGAGATTAGATCAGCGCTGGATGGTTTACGGGGTCCAAACACCGGCCT-----------------GTTTGAGGGT
CGGAGCAGAGCAATCGCAAAATTTCAGTAAAGAAACGGTC----------------------------------------
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-------------------------------------------------------------------------------A
AGGTAAATGCAACATGCA-----------------------------------------------------TGCCTTGGA
ACGGAAGCATAATAAACGCG--------TTGTTCTCTCCCGATCGATCAGCTGGAAAAGTAAGAAATCCCACCATTTTTT
CTTGAAGGGCGGGCGTGTTTGTGGGCAGGAGCGAGCACCGGCGCCGTACCACGTCCGTGCAATCAACCGCCCTACGACGT
GTCTCCATTAGCTGCCGTAAGGGCT--------------------CCAGGACGGGACGATCGCATATAT-ACATCCACCC
AAGCCATGTCCAGGCTGACTCGACGTCGCCATGTCATCGACGAGAGCGCGGCGGAGCGGCGGCCGGCAGTTCGCGGCGGG
CGGCCGGTGGCGGCACGTGGCGGTGGTGGACACGGGGTGCCGGTGCCGCCCGCGCCGCCCGAGGCTGGCGTCCTTCCTCT
GGCCGTCCACGAAGCCGCCGGTGACGAGGAGCAGCAGCAGCTCCCATCCGTCATCCTTCGTCCCCTCCTCC---------
---------------------GCCTCCGCCCACGTCTACAAGCACCACCAGGAGCC---------CTACGGGGTGACGGC
AAAGGCGTCGGCGCTGG------------TTGCGGCGAAGAAGGTGGGCAGCAATCCGGCGAAAAAGAGGCCCGAGAAGA
TGGCG---GCGGCGGCC------GAGGAGGAGGAGGTTGGGGTGGCGGTGGAGAAGGAGTCGTCGGATCCGCGGGCCGAC
TTCCGTGACAGCATGGTGCGGATGGTGGTGGAGATGGGGCTCTGCGACTCGGACGGCCTCCGCTCCATGCTTCGCCGCCT
GCTCGCCCTCAACGCGCCGCGGCACCACGCCGCCATCCTCGCTGCCTTCGCCGAGGTCTGCGCCCAGCTGG------CCT
CGGAGTCTCCAGCGCCGCCGCCTCCGGCGTATCAAT----AC-------ACGAGTGACGAGTGACCATTCGTCGGCTCGG
CAAGCCGGCCGGCCAGGTCG-----TCTGCTCGTGTT---TCTGTTCTGTGTGG-GACTCGGTCCCGAGATCCTGGCACC
ACCT-GGTGTACACATAAACCTGCGACTACCAATAGTGTCGTATAATGTGTGTGCTTGTGTGGCCTTCAGTTTTGCATGA
AGGCCACCAAGGAAACTTGTTAATTA---------------------------------------------TAATCAGCT
CAAATATGTAACTATTT--GTGCGGTTAGCAGTGCTGTG-TTTATTATTCTA---TACATGCATTTGGCACTTTCTAGTG
TTTATATATCAAGTCTGTGTGTACCAGAGGGCCGCTTTTCATTCGTGGGATTAACTCTGTTCTATCTACTCGATCCGTCC
TATTTACTCGTCGCAGAGGTGAATATAAGTGGATGTATATA-AACTAAAATACATCCAGGTACAACCATTTTTACGATAA
GTAATTTCGGACGGAGGGAGTATTAGATTATTTTGGTCGGTTGTTTTGCTTTGTTTTTACTTT-ATCTGGGTTGGTTTAA
GTTTTG---ATTATGTTATGACAATGTTTATTGTTTGTATAGTGTGCTAGTCTGCTGTTGA-GACAGTATTTGTTCCGAG
AAGAGAGTGAAATTGTTTGGTGCATGGTTGTAGTGTCTTTACACGTTTTGGCCTCGGTGTCTGTCGATGTAGTTGTGTGA
GCCCCTTAAG----------------------------------------------------------------------
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----------------------------------AGATTTGTCTTAAGTCAAACTTCATATAGTTTAACAAAGTTTATAT
GAAAAAATATCTACATTCACAATACCAAATCAATACCATTAGATGCATCATAGGGCTAATTTGTATATTGTACACCTTTA
GTATTTGAGATGTTTATAT-TTTTAAATATAAGTTTG-TCAAACTTTATGGAGCTCGACTTAGGATAAAACTAGTATGCA
GAGGAAAAAAGAGCGGAGGGAGTATTAACATTGTAGTAACAACTGCACGGCATAAAAATATCAATAG--CACAGACGTGG
GTTTCAAACAGTAGACCTATTGAAGGGGAGCAGTGCAGCCTACCAGTGGGTTAGACGAGGGGTTGTTTG----TTAGCTA
GGATTCCACCTTATTTATATAAAACAATTTAAAATACAGAAATATTTCAAACGAAACAGTTCT
>chr1A_1
GTACCAGTGAACATCGTGCAAGCACCTGTCAGCTCCCCACCCGGCGTCTGTGTCTTCTCCGAGAAAAGCAACGACGCCAC
GTAACATTGATGAAGGAA-GGCACTTGTCCGGCGATGGTTGTCGTGGACTGCCCACCCGAGCTGCTTGGCGGCGTAGAAA
TACAGAGCCTTATAATGCTCCGACCATGACGGCGTTTGCACGGGCGGTGACGGCAGCG-GGCCCCGCGGCTCAGGCCCCA
ACCTCCGCCATGTTCA-CGACCAGCATGCCCACCGCCACGTCCGCTACCAGCACGCCCTCCGTCGGCCTTCTGCATCTTG
AGTGTTTTCACCTTTGTTTTGACTATGTGAGCAAGTACATCGCTGAGTTCATGTACGCTAATAAGGATAAGGAAGCGATT
CTCCCGCCTTATCATCCCACGTAAGTCATCCGCGGATATCCTTTCGTAAGTTTTAATCATTCCTTTATGTGCGTGTAATC
CTTGGTAGCAGCAGCTACCAAGCATTTATGTGCTTCCCGTAAGTTTTAATCCTTCCTTTATGTGGGTACAGAATACTCCC
ATGCTATGTATTTGGACTCATCGAAGAACATCAAGAAAAAGGATTACACTCACATAAAGAGTGTTCTCGATAGTGCCCTG
TTAACCTTCAGTCTGTCTGGTGGATATATCAAGGTGAAAAGGCACAGGAAGAACGGGCTGGGTTTCGGCCATAAGACCGA
CTTCTGCTGCATCCAGCAACCGTACACTAGTAAGGCTGATGGATTCTACCTCATGTGTCACCTGATCGAGTACACAAGGG
ATAATCAACGCCTTCGCATGTCAGCTACTACCAACGATGCCGAAATTGTCAGCTGGGCCACAAGCATAGGAAAGACACCG
GATCATCGAATCCGACTGAGTTTTATCACGTACAGTGTGAACTTGCCCAAGTGATCATGAAGGAGGTCCTTGAACCAACA
GGGATGTTCTACCATGGGCCAATCACGCGAGATGATGTCGGAGCACTGCTACTCGCTTAGCGTCTAGACCTGAAGCCTTT
CAACAAGCTCGGGTGCTTCCTCCTTGACTATGAAGATTGGACCGCCGACATGGAGGACTGATTGTCGATGACAACTTGTC
ACTACTGTCTTTCTATGGCAAAACTTTAAATTTATGCACGATGAAACTCTGTGATGTAACTAAACCGTCCTCCTGAACTA
ACGTAGATCGCTCTAGTTAATTAGTTTGGATATGAGGAACTTTGTTATTTATGTTTACTATTGGTTGCTTGTATTTTGCT
AATTATGCCTTTTTGTTTTCTTAAGTACATTATGTTGCATGTTATCGTTGAATTCATCAACTGACGATGCAGGTACATAG
ATCAAAGATGGCGAAGGACTGCTACGTCGTGTTCGTTGGGAGGGTTCCAGGAGTGTACGACCACTGGCCAGACGCTCAGG
CCTAGGTGGACAAGTACCCGGGTGCTAGCCATAGAGCGTTCGACAGCAGAGCCGAAGCGGAAAGTAGTTACTTGAGGTGG
ACGCCCCGGCAAGAGCGGGGGCGAAACCGCCGGTGCCTCAAGAAGTACTACATAGTCGCGCTCTTCTCTTTCACATCATG
GTTTAGATAGAGATGATGAAACTTATGTGTGTGCCATGACAATGCAGTTGCATTTATTCGAGACATGACATGACTTGTGT
ATCGCTATTTTTGAGATGTGATGATATTTGTGTTGAATGATGATGATGATGATGATGATGGTATAATGAGACTATTGTAT
GTGTATGATATGACGAGAATAGTGTATGTTTATTATAATATGATGAAACTACTATATAAAGCATGCACAAATACATCGCA
AATACGTAGAGAGGGAATAAATCTGTGAAAGCAGGAATACTAGCAGTAGCGCTGGAAGGCATCTAGCGTGAATATGTCTA
TGCCTAACCAGTTGCGCGCGCAACTCCAATCATCGCCGTCGCTGCGTTATGTGGATCCGTGCGCGCGTGCCCCACCTGGT
CCCACCTAACAACCCATATTCACATTTTCTCAGCGCGATACGCGGCAAGAATATAGTCACATCGTATCTCCCTCGTTCTC
TCGTTCCCCACCGCCCCTGTTCCTTCTTTTCTCGTTCCCCATCTGAGCCATCTCCATCTCCATCGAATCCGGCGCATCCG
GCTCCCTCCTCCGCCACCATGGCCACTCACCGCCGGGTCGCTCCTCCATTGCCTCGAGCCCTCTCCCCTGTGACGTTCTT
CTTCACCCATAGGCGATTGTTCTCCACCCACGCCCTGCTACTTCTATCGTCAGATCCGCCATTGAGGTAAGATGGAGCAA
CATGGCTACCTCATCGCCATCTTGCCTCCTGGTGAAAGGATGCCGGGCATCGACGAACAACGAGCAGCAGCATCACCACC
ACTGTGAGCAGATCTGTGATGGAGATCTACACATTAAGGCAGTGAGGAGTCAAGCGGCTCGGCGGCAAAGCCCAGACACA
CACCTCCCGCAAGCACGCCGGTGGTCAAGAGCTCCAACTCATCTTCCCCGTCTTCCTCGGAGGTATCAGCGATTCGTCTA
CTTGTTTTTTTTTAAAACAAGATTTTTATTCTTTTCTCAATCTTTCGATATGCATCTGATTTCGTGTGTGATAGTGGTTT
TTATGTGATCTTATTTTGTTTCCTCTCCTGCAGCTTTCGGCAAATGACTGCTCTTGTTTTGCCCCTCTCCATAAACATGA
AAACGGATTGATCTTAATGTACTTTTGTAATTCATAGTTTGCTGGAAGAAACAAGGACCTTTTTGATGGCTATCTTTGGA
TTCTTTGGCTACTGTAATTATTATGGCCTCAGTTTTTTACATGAAACATACTAATTTGGTGAAGAACTATTTGGGGATAT
TTTCTGAAGAATGATCTAACAATAATTGGGAATAATTTCTAAAGAACGTTATAAAAAATTCTAAAGAACTTTCTAAGAAA
CGAAGAACTTTCTAACAGGACTTTGTTAACATGGTGTCCGAACTTTGCCATAAAAATCAGAAGAACTTTTGAGAAAACTT
CGCCATTACTAATTGCTTCCTTGGATTTTGTAAAGTTCTTTGGAATTTTCAGTAGAGTTTGCCACAGCCATCTAAAAATT
CCTTTGGTATAAACCAGTAATTCATTTCATTAGTTTTTTCTGAGAATAATTTCGCTATTTTTTTAGTAAATAATAAACCA
CATAAACATCTAAGAATCATTGACTAAACATGGTGCATTAGCCACCCAGGCCCTTGCGTGGACGAACATCTTGGTCCCAT
GTGAGGTCAAATCAGCTGGAATACGGCTGACTATACAAACGGGCGAACTCTCTAGTATGATGGAATACCATGCATGACTG
ACACAGATGTGGGCCATGTTGATTTGACAACAGGCTGGATGTGCGGTGCGGATACAGGTTGCGCGCGCATAGAGTTAGGA
TAAATCCACGTCCCGGCATCGCTTGCTTTGTTGCAGCGCTACATATAGTTAGCAGTAGCGTTGGTCCGGGCAGCGCTACT
GCTACAACAACTTAGCTGTAGCGCGTTAGTAGGCTTTCTCCTAGTAGTACGATTTTGCGGTGTCGCCGAGTTGATCTTTC
-GAACGAGCATGATGCTCGGATCCTCCACCACCTTCGTCTCCGGCAGGTTCTCCTCCGAGTCCATGCGTCTGCGGCGCAA
GGGAAGAAGAGAGTGGGCGAAGAAAAAACGGGAATTGGATGGAGAGAGTTGGGATAGAAAAAGAGAGTGAT-GGATTTTG
CCATGAAAACATTGCAACCAGTTACAAAAGCGCAGGTTTGGCCTTCATTTTGGGC------------TCGGA-TCCTACA
TGACTCGTATCCG------------------------------GTTTG--TGGAAATTTGTGATCTGAACTGCTACGGGA
ACTGACGGGATTAGATCAGCGCTGGATGGTTTATGGGGTCCAAACACCGGCCT-----------------GTTTGAGGGT
CGGAGCAGAGCAGTCGCAAAATCTCGGTAAAGAAACGGTC----------------------------------------
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-------------------------------------------------------------------------------A
AGGTAAATGCAACATGCA-----------------------------------------------------TGCCTTGGA
ACGGAAGCATAATAAACGCG--------TTGTTCTCTCCCGATCGATCAGCTGGAAAAGTAAGAAATCCCACCATTTTTT
CTTCAAGGGCGGGCGTGTTTGTGGGCAGGAGCGAGCACCGGCGCCGTAGCACGTCCGTGCAATCAACCGCCCTACGACGT
GTCTCCATTAGCTGCCGTAAGTGCT--------------------CCAGGACGGGACGATCGCATATAT-ACATCCACCC
AAGCCATGTCCAGGCTGACTCGACATCGCCATGTCATCGACGAGAGCGCGGCGGAGCGACGGCCGGCAGTTCGGGGTGGG
CGGCCGGTGGCGGCACGTGGCGGTGGTCGACACGGGGTGTCGGTGCCGCCCGCGCCGCCAGAGGCTGGCGTCCTTCCTCT
GGCCGTCCACGAAGCCGCCGGTGACGAGGAGCAGCAGCAGCTCCCATCCGTCAT------------CCTTGTTCCCCTCC
TCCGCCTCCACCGCTTCCTCGGCCTCCGCCCGCGTCTACAAGCACCAGCAGGAGCC---------CTACGGGGCGACGGC
AAAGGCGTCGCCGCCGG------------TTGCGACGAAGAAGGTGGGCAGCAACCCGGCGAAAAAGAGGCGCGAGAAGA
TGGCAGCAGCGGCGGCC------GAGGAGGAGGAGGTTGGGGTGGCGGTGGAGAAGGAGTCGTCGGACCCGCGCGGCGAC
TTCCGTGACAGCATGGTGCGGATGGTGGTGGAGATGGGGCTCTGCGACTCGGACGGCCTCCGCTCCATGCTTCGCCGCCT
GCTCGCCCTCAACGCGCCGCCACACCACGCCACCATCCTCGCCGCCTTCGCCGAGGTCTGCGCCCAGCTCG------CCT
CGGAGTCTTCAGCGCCGCCGCCTCCGGCGTATCAAT----AC-------ACGAGTGACGAGTGACCATTCGTCGGCTCGG
CAAGCCGGCCGGCCAGGTCGTCTGCTCTGCTCGTGTT---TCTGTTCTGTGTGG--------TCTCAAGATCCTGGCACC
ACCT-GGTGTACACATAAACCTGCGACTACCAATAGTGTCGTATAATGTGTGTGCTTGTGTGGCCTTCAGTTTTGCATGA
AGGTCATCAAGGAAGCTTGTTACTCCCCTAGTGTCAAAAAACGTCTTATATTCCGGGACGGAGTTAGTAGTTAATCAGCT
CAAATATGTAACTATTT--GTGCGATTAGCAGTGCTTGCTTGTTATTCTACATTCTACATGCATTTGGCACTTTCTAGTG
TTTATATATCAAGTCTGTGTGCACTAGAGGGCCGCTTTTCATTCGTGGGATTAACTCTTTTCTATCTACTCGATCCGTTC
GATTTACTTGTCGCAGAAGTGAATATAAGTGGATGTATCTAGAACTAAAATACATTTTGATACAACAATTTTCGCAACAA
GTAATTTCAGACGAAGGGAGTATTAGATTATTTTGGTCGGTTGTCTTGCTTTGTTTTTATTTT-ATCTGGGTTGGTTTAA
GTTTTG---ATTATGTTATGACAATGTTTATTGTTTGTATAGTGTGCTAGCCTGCTGTTGA-GACAGTATCTGTTCTGAG
AGGAGAGTGAAATTGTTTGGTGCATGGTTGTAGTGTCTTTACATGTTTTGGTCTCGGCGTCTGTCGATGGAGTTGTGTGA
TTCCCTTAAGAGCTCGTACTCCACGCTGAAACCATGGAATTGCTACCAAGGTTTCAAATTTCGAAAACAAGAAAATTTCA
CTCACACTAAAATTTCATAATTTTTAAAATTTAGTTCAGACAAATCGACATTTTTTTATTTAATTTGGAATTAAAACAAC
GGGGTACTCTCTCTATTTTTGTACTCCGCATATAAGATTTGTCTTAAGTCAAACTTCATATAATT---CAAAGTTTATAT
GAAAAAATATCTACATTCACAACACCAAATCAATACCGTTGGATGCATCATAGAACTAATTTGTATGTTGTACACCTTTA
GTATTTGAGATGTTTATATATTTTTAATATAAGTTTGGTCAAACTTTATGAAGCTCGACTTAGGATAAAACTGGTATGCA
GATGAAAAAATAGCGGAGGGAGTATTAACATTGTAGCAACAACTCCACGGCATAAAAATATCAATAG--CACACACGTGG
GTTTCAAACAGTAGACCTATTCAAGGGGAGCAGTGCAGCCTACCAATGGGTTAGACGAGGGGTTGTTTATTAATTAGCTA
GGATTCCACCTTATTTATATAAAATAATTTAAAATACAGAAATATTTCAAACGAAACAGTTCT
>chr6D_32
-------------------------------GCTCCCCACCCGGCGGTCA------CGCCGAGAAAAGCAGCAACGTCGC
GTTGATGTCGACGATGAAGGGCACTTGCCCGACGGCGGAGGTCGGGGACTGCCAACCCAA-CTGCTTGGCAGTGTAGTAG
TACGAAGCTTTGTAATGGTTCGATCATGGCGGTGCCTGCATGGTCGGAGAGGGCGGCGAGGCCCCGCAGCCCAGGCCTCG
GCCTCCACCACATTCGGCGACCAGCATGCCCACCGCCACGTCCGCCACTAGCACGCCCTCCACCGGCCTTCTGCTTCTTG
AGGGTTTCCGCCTTTGCGACCTTCGCTTTGACGCG---------------------------------------------
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------------------------------------------------ACGATTTTACTGTGTCGCCAAGTTAACGTTTT
TGAGCGAGCGTGATGCTTGGATCCTCCACCACCTTCGTCTCTGGCAGGTTCTCCTCTGGGTTCATGTGCCGGCGGCGGGA
GGGAAGAAGAGAGCGGGCGAA-AAAGGGCAGGCATTGGGTGGAGAGCGGCGGGATGGAAGAAGATAGTGAA-GGATTTCG
CCGCGGAAACAATGCGACTAGCTACAAAAG--------------------------------------------------
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>chr1B_424
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--------------------------------------------------CTCCTCCAGGTCTATGCGTCTGCGGCGCGA
GGGAAGACGAGAGTGGGCGAA-AAAAGACGGGAATTGGATGGAAAGCGACGGGATGAAAAAAGAGAGTGGGGGGATTTTG
CCGCGAAAACAGTGCGACCAGTTACAAAAGCGGGGGCTTCGCCTTAATTTTGGGTGTGCCTAGGGCGTCGGAGTCCTACA
TGATTCGTATCCAGACTCCCGCAAAGCCCCCTGGTTTGGTTTCCGTTCACTGGAAAATTATGGCCCGGACTGCTCCGTGA
ACCGATAGGG-----TCGGTGTTGTATAGCATAGGGGGTCCGGACAGCCGCATCGGGATGGATACGTGCGGTTTGAGGGT
GTGAATAGAGCAATCGCAAAATTTAAATAAAGAAATGTGGTCTCTGTTCGCAGGAGAACGAAACTTTGCACCACATCCTT
GTGGGTTGCACGTTTTCTCGCATTACTTGGCATGAAGTGCTATCTTGGTGTCGTCTGCCCGTGCCAACACCGGACGGCAC
GGTGCCATTCTTCCCATGGTGGTCAGACGCCGCTGCCGCTGCCCCTAACTGCCTCCGCAAGGATTTTGCTTCGCTAGCCA
TCATCACCGCCTGGGCCATCTGGAAGCAAAGGAACGCAGTCATCTTCGAGAATGTGCAACCATCTCACACCCAGCTACTC
TCAAGCATCAAGGATGAAGCCCGGCAATGGGGACGCGCTGGGGCCAAAGGACTAGCCGCGATCATCCCTGTAACCCGATC
GCTTTGTACTAGGGCTGAGCAACCCCTTCTCCCTCTGCTCACTTGTGACCTCATCGGCGCCTACTAGTCAACGACCTTGT
ATTCTCTTTTTCCTATCAATGAAAAGATACAGCCTCGAGCATATTCGCGGAAAAAAAAGGTAAATGTATTCGCGAAAAAA
AGGTAAATGCAACATACTAGCAAACCACCACAACTTGTTGTCTCCGGATGCATGCCTGACCACGCATGCATTGCCTTGGA
ACCGAAGGATAATAAACGCGTTTACCACTTGTTCTCTCCCGATCGATCAGCTGGTAAAGTAAGGAATCCCACCATTTTTT
CTTCAAGGACGGGCGTTTTTGTGGGCAGGAGCGAGCACTGGCGCCGTACCACGTCCGTGCAATCAACCGCCCTACTACGT
GTCTCCATTAGCTGCCATAAGAGGAAGGTCAAAGTCCCCAGCCCCCCATGACGGGGTGATCGCATATATAACATCCATCC
AAACCATGTCCAGGCTGACTCGACATCGCCATGTCATCGACGAGAGCGCGGCGGAGCGGCGGC-----------------
----CGGTGGCGGCACGTGACGGTGGTGGACACGGGGTGCCGGTGCCGCCCGCGCCGCGCGAGGCTGCCGTCCTTCCTCT
GGCCGTCCACGAAGCCGCCGGTGACGAGGAGCAGCAGCAGCTCCCATCCGTCAT------------CCTCC---------
---------------------GCCTCCGCCCACGTCTACAAGCACCACCAGGAGCCGGTAGCGACGAAGAAGGTGACGGC
AAAGGCGTCGGCGCCGG------------TGGCGACGAAGAAGGTGGGCAGCAATCCGGCGAAAAGGGGGCGCGAGAAGA
TGGCAGCGGCGGCCGGGGAGGAGGAGGAGGAGGACGTTGGCGTGGCGGTGGAGAAGGAGTCGTCGGACCCGCGGGCGGAC
TTCCGTGACAGCATGGTGCGGATGGTGGTGGAGATGGGGCTCGGCGACTGGGACGGCCTCCGCTCCATGCTTCGCCGCCT
GCTCGCGCTCAACGCGCCGCGACACCACGCCGCCATCCTCGCAGCCTTTGCCGAGGTCTGCGCCCAGCTAGCCGGCCCCT
CGGAGTCTCCAGCGTCGCCGCCTCCGGCGTATCAATCAATAC-------ACGCGTGATGAGTGACTATTCGTCGGCCCGG
CAA----GCCGGCCAGGTCG-----TCTGCTCGTGTT---TCTTTTCTGTGCGG--------TCTCAAGATCCTGGCACC
ACCTTGGTGTGCACATAAACCTGCGACTACCAACAGTGTCGTATAATGTGTGTGCTTGTGTGGCCTTCAGTTTTGCATGA
AGGTCAGCAAGGAAGCTTGT-----------------------------------------------TAGTTAATCAGCT
CAAATATGTAACTATTTATGTACGATTAGCAGTGCTGTGTTTTATTATTCTA---TACATGCATTAGGCACTTTCTAATG
TAATGA------------------------GCCGCTCTTCATTGGTGGGATTCACTCTTTTCTATATATCTACTCCCTCC
GT----CTCATCGCGAAAATGGATCTAAATGGATGTCTTCGAAACTAAAATACAC-------------------------
-----------------------TAGACTATTTTGATCGGTTGTCTTGTTTTGTTTTTATTTTAATCTGGGTCAGCTTAA
GTTTTAGCAATTGTGTTATGATAGTGTTTATTGTTTGTATAGTGTGCTAGGCTGCTGTTGGGGACGGTATTTGTTCTGAG
AGGAGAGTGAAATTGTTTGGTGCATGGTTGTAGTGTCTTTACACGTTTTGGCCTCGGTGTCTGCCAATGTAGTTGTGTGA
GCCCCCTAAGAACTCCTACTCCGCGCTGAAACCATGGAATTGCTACCAAAGGTTCCGAATGTTGAA--AAGAAAACTTCA
CTCACGTTGAAAATTCATAATTTTTGAAGGATGAATCGATGGAA--------TTTTTATTTAAATTTGAATTAAAACAAC
GGGATACTCTCTCCATTTTCTTACTCCGCATATAAGATTTTTATTAAGTAAAACTTCATTTAGTTTAACAAAGTTTATAT
GAAAAAATATCTACATTCACAATACCAAATCAATACCATTAGATGCATCATAGAACTAATTTGTATATTGTACACCTTTA
GTATTTGAGATGTTTATATATTTGTAATATAAATTTGGTGAAACTTTATGAAGCTCGACTTAGGATAAAACTAGTATGCG
GAGGAAAAAATAGCGGAGGGAGTATTAACATTGTAGCAACAACTGCACGGCATAAAAATATCAATAGCACACACACGTGG
GTTTCAAACAGTAGACCTATTCAAGGGGAGCAGTGCAGCCTACCAATGGGTTAGACGAGGGGTTGTTTATAAATTAGCTA
GAATTCCACCTTATTTATATAAAATAATTTAAAATACAGAAATATTTCAAACGAAACAGTTCT
>chr5B_1248
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---------------------------------------------------------------------CC---------
---------------------GCCTCCGCCCACGTCTACAAGCACCACCAGGAGCCTGCAGTGCCCTACGGGGTCACGGC
CAAGGCGTCGGCGCCGG------------TTGCGAGGAACAAGGTGGGCAGCAA---GGCGAAGAAGAGGCGCGAGAAGA
TGGCAGCGGCGGCCGAGGTGGAAGAGGAGGAGGACGTCGGGGTGGCGGTAGAGAAGGAGTCGTCGGACCCCCGGGCCGAC
TTCCGTGACAGCATGGTGCAGATGGTGGTGGAGATGGGGCTCTGCGACTGGGACGGCCTCCGCTGCATGCTTCGCCGCCT
GCTCGCCCTCAACGCGCCGCGCCACCACGCCGCCATCCTCGCTGCCTTCGCCGAGGTCTGTGCCCAGCTCG------CCT
CGGAGCCTCGCCCGCCGCCGCCTCCGGCGTATCAAT----ACGACTACTACTACTGACGAGTGACCAGTCGTT-------
------------CCAGGTCG-----TCTGCTCGTGTTCCGTCTGTTCTGTGTGG-GGGCTGCTCTCGAGATCCTGGCACC
ACCT-GGTGTACGCAT----------------------------------------------------------------
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>chrUn_1248
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---------------------------------------------------------------------CC---------
---------------------GCCTCCGCCCACGTCTACAAGCACCACCAGGAGCCTGCAGTGCCCTACGAGGTCACGGC
CAAGGCGTCGGCGCCGGCGCCGGCGCCGGTTGCGAGGAACAAGGCGGGCAGCAG---GGCGAAGAAGAGGCGCGAGAAGA
TGGCAGTGCCGGCCGAGGAAGAGGAGGAGGAGGACGTCGGGGTGGCGGTAGAGAAGGAGTCGTCGGACCCCCGGGCCGAC
TTCCGTGACAGCATGGTGCAGATGGTGGTGGAGATGGGGCTCTGCGACTGGGACGGCCTCCGCTGCATGCTTCGCCGCCT
GCTCGCCCTCAACGCGCCGCGCCACCACGCCGCCATCCTCGCTGCCTTCGCCGAGGTCTGCGCCCAGCTCG------CCT
CGGAGCCTCCCCCGCCGCCGCCTCCGGCGTATCAAT----ACGACTACTACTACTGACGAGTGACCAGTCACTGGCTCGG
CAA----GCCGGCCAGGTCG-----TCCGCTCGTGTTCCGTCTGTTCTGTGTGGGGGGCTGCTCTCGAGATCCTGGCACC
ACCT-GGTGTACGCAT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>SNPs
------S-------------------S---------------------------S------------------S------
-----S---------S----------------------------------------------------------------
----------------------S--------------SS--------------S--------------------------
----S---------S-----------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-----S------------------------
--------S--S--------------------------------------------------------------------
------------------------------S-----------------------------SS-----S------------
--------------------S-------------S------SS-------------------------------------
------S------S--------------S-SS----S-S-S-S-------SS-S---------S----------S--S--
-------S-------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
---------------------S----------------------------------------------------------
------------------------S------------------------------------------------S--S---
--------------------------------------------------------------------------------
------------------------------------------------------SSSSSSSSSSSS--------------
--------------------------------------------------------------------------------
--------------S-------------------S------------------------------------S--------
----S--------------------------------------------------------------S------------
--------------------------------------------------------------------------------
---------------------S-----------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------SSSS-S--S---------------
--------------------------------------------------------------------------------
---S--S-------S-------S-SS------------------------------------------------------
------------------------S-------------------------------------------------------
---------------------S--S---------------------------------S---------------------
S----------------S--------------------S----------------SSS-S------S-----SS-S-S--
--------S----S------------------------------S--------------S--------------------
--------------------------------------------------S-------------------------S---
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SS-------------------------
------------------------S-------------------------S-----------------------------
----------S-------------------------S------------------------------------S------
---------------------S-----------------------S----------------------S-----------
------------------------S--------------------------------------
>forward_3883
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAGCCTCTGGGTTGGTTCTG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_5945
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------CAGAGGGCCGCTTTTCATTC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
