>input_sequence_69980
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-------------------------------------------------------------------------------T
TCTCACCAAACCAGCTCCGATACAATCTCATAATACAGTGGCCGACTAAGAC-ACACAGCGAGGAGAAGAGGGTTCGACC
GGCGTCAATGGCGACGTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCG
AAGAAACTCGTGAGAAACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAA-ACGAATTTTACAGTGG------
-TATGGGTTGATGCAGAGGCCAAGAAGGAGGAGCCCACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCC
GGGCCGTGGTTATCCCGGGCGCGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCGGGCC
GCGGCGGCGGCGGGTACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGAC
GAGGTCCCGGAGCCCATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGAGCATGCATCCACCGGATGCAGCAGCGT
GTACGCCTGCACGTGCCTAGTTAATCTGCTTATACTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGC-
---TATGTGTTCATGTGTGTTTATGGTGTGCTTGTTCGAAAGACGTACTGGTCAGTGTACGGACGTATTG-TACTACTGT
GCCCGTGTTGTGTTCATCATGGAATAAAATGACAGGCGAATT--------------------------------------
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>chr6D_1_TraesCS6D01G283000
TCTTGACTACGTGGCTCTAGGTGGACCCCACCAGTCAGAGCACATAACCCCGGTGTCCTAACCAAACCCCAGCCTAACTA
ACAGCCAACTAGCCGCATAAACGGGTTGTCTTGCTTGAGCTATTTCTGCGCTGGGAGACGTCGCATGAGAGCCATTACAA
CCAATGACGTCGCATGAGAGACAATTCACACCAACGACGTCGCATGGGAGCTATTTGCCCTCATTGAAGTCATTTCCAGG
AGATGGACAAAACTCGATAAAATGACTTAGAGTATGCCCTGCGAGAGTGAGGAGGAAGAAAGATGCAGCATGGCTGGTCT
TAGGCATTCTTTGGTTTAGAGGAATCTTGTAGGAATTTCATAGGATAGGATTTCTATAAAAAAATTCCTTTAGAGCCCTT
TGGTTTGTAGGAATGGAATCCTATTCCTATGGAGGAATTCTTCCTATCCTCCACATTTCATAAAAAATAAAAATTAGTCT
AGATTCAATGGGAAAAATCCTATGATGTGAATCAAATGGCATCTTTTTTCCTATTCCTACTCATAGGATTTAAGATGCAT
GTTATCTCATTTTCTATGATTTTTCTATTCCTACGATTTTCTTACCCTACGAATCAAAGGAGGCCTTAAAGTTGAGGGAC
CAAAACAAAAATACTCTTTTCTCTGATAATCTGATGCACTGCCACGTGCATGACTAATATCAAAC---------------
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------------------------------------------------------------GGAGCTGGACTGATTCATGT
ATGCGATGTTGCCGAGTCA-----------------------------AACTTGACATGCACATGCATGTCTCCTGTTCC
TCCTC-AACTAGTCCACTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGAT----AACGCAGAGCTCTTGCTACCTG
CATGCATGCATGCATGAAGGCG---TTAATGCATGCCGTCCATCCGCCAACCGCTACCGCTCGGAGCCTGCATGTTGACC
CATCGGTCGATAATATCGTCAAGAACC-------AGAGGTTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCT
TCTCACCAAACCAGCTCCGATACAATCTCATAATACAGTGGCCGACTAAGAC-ACACAGCGAGGAGAAGAGGGTTCGACC
GGCGTCAATGGCGACGTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCG
AAGAAACTCGTGAGAAACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAA-ACGAATTTTACAGTGG------
-TATGGGTTGATGCAGAGGCCAAGAAGGAGGAGCCCACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCC
GGGCCGTGGTTATCCCGGGCGCGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCGGGCC
GCGGCGGCGGCGGGTACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGAC
GAGGTCCCGGAGCCCATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGAGCATGCATCCACCGGATGCAGCAGCGT
GTACGCCTGCACGTGCCTAGTTAATCTGCTTATACTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGC-
---TATGTGTTCATGTGTGTTTATGGTGTGCTTGTTCGAAAGACGTACTGGTCAGTGTACGGACGTATTG-TACTACTGT
GCCCGTGTTGTGTTCATCATGGAATAAAATGACAGGCGAATTTGCTCTTCTACGCTGGGCTTTGTTAATCAATTCATGCA
CC---TGATACTCATAAATAAAATAGTGCCTTATTTCTGGAATTGCGAGGAGGGAAAATATAAATCACCTGCCAACTAAG
GGTCGTCCTCCGTGCTGCATGCCTAGTGCGTGTGCGTGTGTCCGTGCGCGCGCGTGTGCATGCGGTTTAGTTTCAACTTC
TCTGCTGATGGAAAGCGTGAACGTGCTTGAACGAAGATTGTA--TAAACCAATGCATAATTGTATAGGACGTGTTTGGCT
CCAGATTGAGTCTCAACTATTGGTAAAGCGGTCATACTTCCTTTGGTAGTGACCGGTGAAAGACTTCCTTTGTTGAAATG
TTCTGTTCCCAAAATTCCTATTCCATGACGGATTTAAACTTACCTTCTATTTTCGTGCCTTTAGTAGACCCCATTGTCTC
CACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCCTCGGCGTCCAGGGGTCACGGACGTTTTAAATCCATTGCAATT
TTTTTTCTTCTTCTTTTTCGAGAAATGGAAGTTTGGGCTTTAGAAGGATTTGGTGTTGCTCATATTTTACAAATCAAAAT
AAGATAATATAAGATATTATTGCTGGAAAAACGAAAAGGGTTTTCCATGAGATGGTAAATGAAAACGATTAGTCCCACTA
AGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCTCATGGATTCAGCAGGCAGGTTGCCGTCGGCTACATTACCTGCGT
TGCATACTCTTCTCCACTCAGTCTGGTTCTGAAAAAACAGCCTCATATGCGACATCTGCAAGTTGTTTGGTTACCTGTAT
ATAGACTTCCTGCATTAGGGGATCAACTTTGGCACGTTGTTTGGTTGCCTGCATTGTCTCGGCACATACAACTACACGCT
GTTTGGTTGCCCGCATGGGGTATGATTAAGAGCTAGCACTTGCACTTAGCACACAGGGTTAAGAGCTAGCAAAGGAAGGG
GGAGAAG
>chr6B_618
AGGGGT--------------------------------------------------------------------------
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----------------------------------------------------------------CTTAAAGTTGAGGGAC
CAAAACAAAAATAGACTTTCCTCTTTAATATACTCCTTCCGGTCCTTTTTACTCTGCATATTAGATTTGCCGAAAGTCAA
ACTTTGCTAAGTTGGACCAAATTTATATTAGAAATTATTACCATCTATAATATCTAATAAATATAATAATATGAAAATAT
ATTCCAAGATGAATTTAATGATATTGGTGTTGTTATGTGAATGTCTATAATTTTTTATATAAACTTGGTCAAAATTGGAT
GAGATTGATTTCGGACAAACCTAATATGCAGAGTAAAAAAGACTGGAGGGAGTATCTACTGGAGCGTGATAAGTTCATGC
ATGCGATGTTGCCTAATCAAACTTGGCATGCACAACGTATGTCTCCTCAACTAGACACGCACATGCATGTCTCCTGTTCC
TCCT------------CTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGATGATAAACGCAGAGCTCTTGCTACGTG
CATGCATACAG----GAAGGCTTTATTAATGCATGCCGTCCATCCGCCAACCGCTACCGCTCGGAGCCTGCATGTTGACC
CATAGGTCGATAATACCGTCAAGTCGTCAACCCTAGAGGTTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCT
TCTCACCAAACTAGCTCCGATACAATCTCATGATACAGTGTTCGACTAAGAC-ACATAGCGTGGAGAAGAGGGTTCGACC
GGCGTCAATGGCGACGTTCAAGGGTTTCCTCCTCGTGTTTGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCG
AAGAAACTCGTGAGATACCATGCACCACTAGCTAGTTTTGTTACGATT---TTTGAAAACGAATTTTACAGTG-------
TTATGGGTTGATGCAGAGGCCAAGAAGGAGGAGCCGACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCC
GGGCCGTGGTTATCCCGGGCGTGGTCGCGGAGGAGGGTACTACCCGTACCCTGGCCGCGGAGGAGGCGGGTACCCAGGCC
GCGGCGGCGGCGGGTACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGAC
GAGGTCCCGGAGCCCATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGACCATGCATCCACCGGATGCAGCAGCGT
GTACGCCTGCACGTGCCTAGTTAATCTGCTTATAGTGTGTGTTCTTGAGGAACGCAGCTAGCCCTGTGTTCTTGCAAGCT
ACGTATGTGTTGATGTGTGTTTATGGTGTGCTTGTTCCAAAGACGTACTGGTCAGTGTACGGATGTATTG-TACTGCA--
-CCCGCGTTGTGTTT---ATGGAATAAAAAGACAGGCGAATTTACTCTCCTACGCCGGGCTTTGTTAATCAAGTCATCCA
CC---TGATACTCATAAATAAAATAGTGCCTTATTTCTGGAATTGCGTGGAGGGAAAATATAAATCAGTTCCCAAATAAG
AGTCGTCCTCCGTGCTGCATGCCTAGTGCGTGTGCGTGTGTCCGTGCGCGCGCGTGTGCATGCGGTTTAGTTTCAACTTC
TCTGCTGATGGAAAGGAGGAACGTGCTTGAACGAAGATTGTA--CAAACCAATGCATAATTGCATA--------------
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>chr6A_745
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------------------------------------------------AACTAGACTCGCACATGCATGTCTCCTGTTCC
TCCTCAAACTAGTCCACTCTCGCATTTTCTACACTTGCACTGTAGAGATAAGAT----AACGCAGAGTTCTTGCTACCCG
CATGCATGCAG----GAAGGCG---TTAATGCATGCTGCCCATCCGCCAACCGCTACCGCTTGGAGCCTGCATGTTGAA-
--------------------------------CTAGAGGCTTCTCTGCCTATAAATAAGCTTGCGCTGCATGCATTAGCA
TCTCACCAGACCAGCTCCGATACAATCTCGTAATACAGTGCTCGACTAAGATTACATAGCGTGGAGAAGAGGGTTCGACC
GGCGTCAATGGCGATGTTCAAGGGTTCGCTCCTCGTGTTCGCTCTCCTGCTTGCTGCTGCTTTCCTCGTCGCCTCGGCCG
AAGAAACTCGTGCGACACCATACACTACTATCTACTCCAGTTTTGAATCGATTTGAA-ACAAATTATTATACAGTGTTAA
TTATGGGTTGATGCAGAGGCCAAG---GAGGAGCCGACGGCCGACGTGCAGGACTACTACCGTGGCGGCGGCGGCTACCC
GGGCCGTGGTTATCCTGGGCGCGG------AGGAGGGTACTACCCGTACCCTGGCCGCGGAAGAGGCGGGTACCCAGGCC
GCGGCGGCGGCGGGTACTGCCGGTGGGGCTGCTGCGGCCGCGGGTACTACGGCGGCTGCCGGTGCTGCTCGCGCGCCGAC
GAGGTCCCGGAGCCCATGTACCGCGCTGAGGCGGAGGTGCACCACTGAGCCGAGCATGCATCCACCGGAT---GCAGCGT
GTACGCCTGCACGTGCCTAGTTAATCTGCTTATACTGTGTGTTCTTGAGGAACGCACCTAGCCCTGTGTTCTTGCAAGCT
ACGTATGTGTTGATGTGTGT---------GCTTGTTCGTAAGACGTACTGGTCAGTGTACGGATGTATTGTTACTGCA--
-CCCGTGTTGTGTTT---ATGGAATAAAAAGACAGGCGAATTTGCTCTTCTACGCTGGGCTTTATTAATCAATTCATCCA
CCAGCTGATACTCATA-----AATAGTGCCTTATTTCTGGAATTGCGAGGAGGGAAAATATAAATCAGCTGCCAAATAAG
AGTCGTCCTCCGTGCTGTATGC-TAGTGCCTGTGCGTGTGC----GCGCTCGTGTGTGCGTGCGGTTTAGTTTCAACGTC
TCTGCTGATGGAGAGGGTGAACGTGCTTGAACGAAGGTTGTATATAAACCAATGCATATTG-------------------
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>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
-------------SS----S----SSS-SSSSSSSSSS-S-SSS-S-SSSSSS--SSSSSSS-SS---------------
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-----------------------------------------------------------------SS--SSSS------S
-------------S-S------------------------------------S----S----------------------
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----------SSSSS-----------------------------------------------------------------
---S-----------S-------SSSS-----------------------------------------------------
----------------------------------------SS--------------S----S------------------
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---------------S----------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------------------------------------------S----
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-----------S---------------------------------------------------S-----------S-SSS
S-------------SSSS-----------S-----------------------------------------------S--
-------------------------------------------------------------------S-------S----
S-------------------------------------------------------------------------------
---------------S----------------------------------------------S---SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS
>forward_103
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---GCCAACTAGCCGCATAAACG---------------------------------------------------------
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>reverse_1999
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------------------------------------------------------------------------------GT
GCCCGTGTTGTGTTCATC--------------------------------------------------------------
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>forward_299
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---------------------------------------TGCGAGAGTGAGGAGGAAGA---------------------
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>reverse_2527
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----------------------------------------------CAGGGGTCACGGACGTTTTA--------------
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