>input_sequence_69975
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--------AGGAACTCAGTGCCCTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGGGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTTGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACTGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAAGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGTGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGATGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGGCCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGTCTGCT
TCGCACTGCCAAGAAGTGGCTCACCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCGGGAGTAGATTAAA--------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr4A_1_TraesCS4A01G220500
GCCATGACGAAGCCGAACGAGCGGAGCGGAGCCGGTCGAAGCTTCGCTCAAAGATCCTTGCCTTGCATATAATAATATGC
ATTTGATTTTTCTAATTTGAGGTATCCGGATGTGACTCGTCCCCGGGCGTTTGATGAGTCGGATTTGCATAGGCCGGTTG
TAGATGCTCTTAGTTAAAAGAATGGTTTAGTTCAAACTTTGTTTAATTTTGTCCTTTCGATTGTAATTTATTAAAATTTA
ATAAATATCGTTCGTTTTATATGAATTTCGTTTGCTTTTGTTAAATAACCGTTCAAATTTGATAGGACATTTGGTAACTC
CAGTTGGATGACGAC----------------AGTGGACACGTCCGTTGTTGATGTGCATTTTGATCAACCGCG-TTAGAG
TTGCCCTAACGTGATTTGTCT--------------------------CGTACAAGATTTTACTAGTTTATACTACAAGCT
-------------------------------------------------------------------CCCCCAAAAGAAA
TCCAAATATGAATCCAAATACCTCTCTGATTAAGGGCTCCTTTGATTCTAAAAAAGAGGATTGAAATTTTTAGAATTTTT
TTCTATGTTGGTCCTTTGATTCATAGGATTAGATTTCTTAGGATTTTTTTTCTATGAAATATTTTGTACTACATTTTATA
GGAAATTTAATATCCACTCCAACCTTTTTTTACAATTTCATTGTTTTTCATGTGGCATCGAACACTCATGACTAATTCTA
TAAAATTTAAGTGGGCATTGCCACTCGAACCCTATACATTTTCTATTCCTACATTTTTAAAATCCTAGAAATCAAAGAGG
CCATAAATGTCGGGTTCATCTCGACTGGGAGATGAACACCTAGTGATCCACAGGTTCTGTTTTTCTGTACAATCACAGCC
GTCCAAATATGCTTGGATTCATTTCGGTAACGGAGACGTGAATCCACAGAATCC-AA-GAGGATTCAGCAGCTTCGGTTC
TTCTCCGAGGACGGCTTGGGGTGGAACTGGAACCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCTCAGGAACTCAGTGCCCTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGGGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTTGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACTGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAAGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGTGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGATGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGGCCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGTCTGCT
TCGCACTGCCAAGAAGTGGCTCACCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCGGGAGTAGATTAAAAGAGATTAGATCGCAGTACA
ATGTAAACTGTTCCACGTATACTTAGTTACAGATCATGGTACTGATCTCTGCAATAGTGTTGATTTCTCGTTAACTTGAT
TGGTCTTGGTCCACGGAGATGTGATTTGTAAACCGTATTCCTATGCGGGGTGCTAATTCTTTATTGAAAAAAAATATTGG
GTTGTAATTTTGATGTACACCCT-TATTTTGCCATGAACAATCGCTTCTTAGAAGAAAA--ATAATGATTTTATCAAGCA
GACCCGATTACAATCTCCACAAAGATGATGAAATGTTTAATTGGGAAAAGATATTTGAGCCAAGGAGGAGGCCCTCGCGT
CACTCCGCAGGGGCGACTCGGGGGCGACTAAATAACAAAGTATACATTGAAAGGGAGACTTGTATGAGCTCTCATATTTA
TGTGAGATGGTGAGATCAATCCCAAAAAAATCATATTTAGACATTTCAAAAAATATCTAAAATTATTTGACAACATTCAT
GTGGTGTATGTCTAGATATCCGGAAAAAATCAGCTC---AAACTCGATGTACATTTAGAGATTAAAAAAGACAAATTCGA
ATGTAAATAGTAGCGGCTTTGGATGAATAGTCTTTTGATACTATCTGCACTCAATTTTTTCTCTTTTA--TCTATTAAT-
TAAGTTGAATTATGAGCTGAAATTTTTTAAGGCTGTACATCAAGCATTGATGTGTGTCTACAAAAAAATTGAGAATGTTT
AAACATGTTTTTTTTGCAAAAAACTTAATCTCATAAATCTCATCTAATGTGAGATCTCACCCAAATCTACCCTAGTACAT
AGATGCCAAACGACTCGTCTGTGGTTGATCAGTGCAACAAAATTGACTTATTGCGGAACTATCTCTGCTCCTATAAAAAA
TCTGAGTTGATGATAATGGTATGCCTGCCATCTTGGCTTTAGGATCGTCGGATCTGCATTTAATGCACAACACAAAGCAA
TATGGGCAATTTTATAGAAAGACGCCCGA
>chr4B_174
TTTAAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------AATGGTTTTGTTAAAACTTTGTTTAATTTTGTCCTTTTGGTTATAATTTATTAAAATTTA
ATAAATATCGTTCGGTTTGCATGAATTTCGTTTGCTTTTGTAAAATATCCGTTCAAATTTGATAAGACATTTGGTAACTC
CAGTTGGATGACGACCGCCCCAATCACTGTTAGTGGACAAGTCTGTCGTTGATGCGTGTTTTGATCAACCACGCTTGGAC
TTGCCCTAAAGTGATTTGACTAAATTTATATTGGGCGCATTATTGTGCGTACAAGATTTTACTAGTTTATACTAGAGTGA
TCTAAATGCTCTTATATTAGTTTACGGAGGGAGTACAATCTAAATTCTGAGCGTCAAGTAGCGTTTCCCCCCAAAAAAAA
TCCAAATACCGCTCCGAT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TAAATGTCAGACTCATCTCGACTAGGAGATGAACGCCTAGTGATTCACTGGTTCTGTTTTTCTGTATGATCACAGCC
GTCCAAATATGCTTGGATTCATCTCGGCAACAGAGACGTGAATCCACAGAATCC-GA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGACTTGGGGTGGAACTGGAACCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCTCAGGAACTCAGTGCCCTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCATCCGCGACTCT
CTGCT-----TCCGTTCGTCCAGGCGATGGGGATGGCTGTACTCGACGAGGCCCAACGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTTGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGGCCTGCCCGCACGACGCCTCG
CTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGTCTGCT
TCGCACTGCCAAGAAATGGCTCACCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGAT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCGGGAGTAGATTAGAAGAGATTAGATCACAATACA
ATGTAAATTGTTCCACGTATATTTTGTTACAGACCATGGTGCTGATCTCTGCAATAGTGTTGATATCTCGTTAACTTGAT
CGGTCTTGGTCCACGGAGATGTGATTTGTAAACCGTATTCCTATGCGGGGTGCTAATTCTTTATCGAAAAAAA-TATTGG
GTT--AATTTTGATGTACACTCTGTATTTTGCCATGAGCAATCCCTTCCTAGAAAATAATAATAATGATTTTATCAAGCA
CACCCGATTACCATCTCCACAATGATGATGAAATGTTTAATTGGGAAAAGATATTTGAGCCAA-GAGAAGGCCCTCGCGT
CACTCCGCAGGGGAGGT-----------TAAATAACAAAG--TACATAGAAGGGGAGACTTGTATGAAATCCAAATAATA
ATAAT-----------------------AATCATATTTAGACATTTCAAAAAA-ATCTGAAATTATTTGACAACATTCAT
GTGGGGTATGTCTACATATCCGGAAAAAAAATCAGCACAAAACTCGATGCACATTTAGAGACTAAAAAAGACAAATTCGA
ACGTAAATAGTAGTAGCTTTGGATGA-TAGTCTTTTGACACTATCCACATTTGATCTTGTCTTTTTTGTTTCTATTAATG
TAAGTTGAATTAGGAGCTGAATTTTCTTAAGGTTGTACATCAAGCATTGATGTGTGTCAACAAAAAGATTGAGAATGTTT
AAACATGTTTTTTTT-CAAAAAATTTGATCTCATAGATCTCACCTAATGTGAGATCTCACACAAGTCTACCC-AGTACAT
AGATGCCAAACGACTCATCTTTGGTTGATCAGTGCAACAAAATTGACTTATTGTGGAACTAT------------------
--------------------------------------------------------------------------------
-----------------------------
>chr4D_774
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---TAAATGTCAGACTCATCTCGACTAGGAGATGAACGCCTAGTGATTCACTGGTTCTGTTTTTCTGTATGATCACAGCC
GTCCAAAGATGCTTGGATTCATCTCGGCAACAGAGACGTGAATCCACAGAATCC-GA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGACTTGGGGTGGAATTGGAACCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCTCAGGAACTCAGTGCCCTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCGTTCGTCCAGGCGATGGGGATGGCTGTACTTGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGTGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAATCCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACC-TGGCGGCACGGGCCGTGAAGGCCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGATCGGGTCTGCT
TCGCACTGCCAAGAAGTGGCTCACCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGACCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCGGGAGTAGATTAGAAGAGATTAGATCACAGTACA
ATGTAAATTGTTCCACGTATATTTAGTTACAGATCATGGTGCTGATCTCTGCAATAATGTTGATTT--------------
--------------------------------------------------------------------------------
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-----------------------------
>chr4A_842
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATCAGAGCC
ATCCAAATATGTTTCGATCCATGTCGGTAACAGATACGTGAATCCACAGAATCCAAA-AAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGACCTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTCGCCTCAGGAACTC
AGTGCCCC----------------A----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTGCTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
TGGCGACATGAAGGAGGCGG-GCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCCGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGATGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCAGCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTCAAGGCCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGTCTGCT
TCGCACTGCCAAGAAGTGGCTCACCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCGGGAGTAGATTAAAAGAGATTAAATCGCAGTACA
ATGTAAACTGTTCCACGTATACTTAGTTACAGATCATGGTACTGATCTCTGCAATAGTGTTGATTTCTCGTTAACTTGAT
TGGTCTTGGTCCACGGAGATGTGATTTGTAAACCGTATTCCTATGCGGGGTGCTAATTCTTTATTGAAAAAAAATATTAC
AGTAAACCAGATTGCAGTAAATCAGCGGCTAGTCGCCGTGATCGATTGCAGCTTCTGGATCGTAAACCAGATTGGATTTT
AGTAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
ATGTAAATTGTTCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr4B_842
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATCAGAGCC
GTCCAAATATGTTTCGATCCATCTCGGCAACAGAGACGTGAATCCACAGAATCCAAA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGAGCTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCCC----------------A----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGACCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGAGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGGCTGCT
TCGCACTGCCAAGAAGTGGCTCTCCAATGTCGAGCAGAGTCGCGGCTGCTCGTCGCTCGTACCCCGGCCGCCGCAGGGGT
ACCAGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCTGGATCG---TAAACCAGATTAGATCTTGGTACA
ATGTAAATTGTTCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr4B_842
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATCAGAGCC
GTCCAAATATGTTTCGATCCATCTCGGCAACAGAGACGTGAATCCACAGAATCCAAA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGAGCTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCCC----------------A----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGATGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGACCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGAGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGGCTGCT
TCGCACTGCCAAGAAGTGGCTCTCCAATGTCGAGCAGAGTCGCGGCTGCTCATCGCTCGTACCCCGGCCGCCGCAGGGGT
ACCAGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCTGGATCG---TAAACCAGATTAGATCTTGGTACA
ATGTAAATTGTTCCAC----------------------------------------------------------------
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-----------------------------
>chr4B_842
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATCAGAGCC
GTCCAAATATGTTTCGATCCATCTCGGCAACAGAGACGTGAATCCACAGAATCCAAA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGAGCTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCCC----------------A----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGGACCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCACGCGCGCACCGTGGCGGCACGGGCCGTGAAGACCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGAGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGGCTGCT
TCGCACTGCCAAGAAGTGGCTCTCCAATGTCGAGCAGAGTCGCGGCTGCTCATCGCTCGTACCCCGGCCGCCGCAGGGGT
ACCAGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCTGGATCG---TAAACCAGATTAGATCTTGGTACA
ATGTAAATTGTTCCAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------
>chr4D_842
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ATCAGAGCC
GTCCAAATATGCTTGAATTCATCTCGGCAACAGAGACGTGAACCCACATAATCC-AA-GAGGATTCAGCAGCCTGGGTTC
GTCTCCGAAGACGACTTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCTCAGGAACTCAGTGCCCTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGGA----------T
CTGCT-----TCCGTTCCTCCAGGCGATGGGGATGACTGTACTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTTTTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCATGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTGTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCGCCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCGCGCACCGTGGCGGCACGGGCCGTGAAGGCCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGCGACGCCATCGAGATCGAGCAGCAGAGGCGGCA---TCGGTCGGGTCTGCT
TCGCACGGCCAAGAAGTGGCTCGCCAACAGCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCTGGATCG---TAAACCAGATTAGATCTTAGTACA
ATGTAAATTGTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr4D_842
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATCAGAGCC
ATCCAAATATGCTTGGATTCATCTCGGCAACAGATACGTGAATCCACAGAATCC-AAAAAGGATTCAACAGCCTGGGTTC
GTCTCCGAAGACGAGCTGGGGTGGAACTGGAATCCCCTTACAAATTGCCGCCCTCGCGCTGCTATTC-------------
---GCCTCAGGAACTCAGTGCCTTA----ATTGCTAGACATTGACCAGG---GATCCATCCAGGGCGCA----------T
CTGCT-----TCCCTTCGTCCAGGCGATGGGGATGGCTGTACTCGACGAGGCCCAGCGGCGACGGCGGCAGAGCGTCTAC
GAGTTCCTGGACGCCACCAAGCCCGCGCGCGCCCAGGCGCTGCGATGGTGCGAGACGGCGCGGGAGATGCGTAGGATCGA
CGGCGACATGAAGGAGGCGG-CCCAGCTGCTCCGCGGCGCCCTCTCCTGCGTCAAGGACTACGCGTCTGTCTACAGGACG
TGGATCGCCGTGGAGATGGACGGCGGCGGCGGCGTCGGCGTTGCCCGGTGGCTCTTCGAGGAGTGGGGCACCGTCTGCGC
CAAGGATGGAAACCTCCGCAAGGACGACGACGGCACCACCGCCGACGAGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCCGTCACGGGGACGCCAGGCGCGCCCGCACCGTGGCGACACGGGCCGTGAAGACCTGCCCGCACGACGCCTCG
TTGCGCGACACGGTGGAGCTCCGCCTTAGAGACGCCATCGAGATCGAGCAGCAGACGCGGCA---TCGGTCGGGGCTGCT
TCGCACTGCCAAGAAGTGGCTCTCCAATGTCGAGCAGAGTCGCGGCTGCTCATCACTCGTACCCCGGCCGCCGCAGGGGT
ACCGGAGGCTCCTCAGCGGCTAGTCGCCGTGATCGATTGCTGCTTCTGGATCG---TAAACCAGATTAGATCTTAGTACA
ATGTAAATTGTTCCACGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr5D_962
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CCCCTTACAAATTGCCGCCCTCGCTCTGCT---C-------------
---GTCCCACGAACTCAGGGCCCTAATCGATAGCTAGACATTGACCAGGAGCGCTCCAGGGCGGGCGCATCTGCGGCTCT
CCGGCCCGGCTCCGTCCGTCCACGAGATGGGGATGGCCGTGCTCGGCGAGGCCCAGCGGCAGCGGCGCCGGAGCGTCTAC
GAGTTCCTGGACGCCACCAGGCCGGCGCGCGGCCAGGCGCTGCGGTGGTGCGAGACGGCGCGGGAGATGCGCAGGGTGGA
CGGCGACATGAAGGAGGCGC-GCCTGCTGCTCCGCGGCGCCCTCTGCTGCGTCAAGGACTACGCGTCCGTCTACAGGACG
TGGATCGCCATGGAGAAGGAGGC---CGGCGGCGTCGGCGTCGCCCGGTGGCTCTTCGAGGAGTGGGGCGCCGTCTGCGC
CAAGGACGGCGGCCTCCGCAACGAGGGCGACGGCGCCACCGCCGACGCGTACGGCGACTACTGGTGCGCGTACCTCGCGT
TCGAGCTCGGCCACGGAGACCTCCGGCGCGCGCGCGCCGTCGCGGCGCGGGCCGTGAGGGCCTGCCCGCGCGACGCCTCG
CTGCGCGACACGGTGGAGCTCCGCCTCAGGGACGAGCAG------GAGCGGCAGAGGCGGCGGCGTCGGCCGGGGCTGTT
CCGCAGCGCCAAGAAGTGGCT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--------S---S------------------------S-S--S-----------------
--------------S---SS---------------------S-----S----------------S---------------
---------------------------------------S---S--S-------S-SS------------S-----S--S
---------S--------S-------------------------------------------------------S-SSSS
----------------------------------------------------------------------------S---
--------SSSS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS--------S-SS-----------S----------S---------S---S-----------------SS---------
----------------------S--------S----------------------------------------S-S-----
S-------S----S------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------------------------------------------S----
--------------------------------------S-----------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---SS---------------S----------------S----------S-----S-S-----------------------
S----------S----------S----------------------------------------S---S------------
-------------S-SSSSSSSSSSSSS------------SS-----S---S---------------SS--SS-SSSS--
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S----S---------------------
----S---------S--------------SSSSSS--------------S-----------S------------------
--------------S-----------S-----------S------SS--S-SS--S--S---S----S------------
------------S--------S---S------S-------------------------S-------S-------------
---------------S-------S--S--------S------S-----------------S---S-------S-------
----------------S---S--------------------------------S--------SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_171
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GGCCGGTTG
TAGATGCTCTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------
>reverse_1186
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GGCATCTGCTTCCCT
TCGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGGATGACGACAGTGGACAC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_2257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CTCGGGGGCGACTAAATAACA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
