>input_sequence_69913
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----------------CAGATCTCAACATCTCCC---GGCGAGTTGAGCAGAAATCAG-ATCAGCCGATGGCCGGCGTCG
AGTGTGTCTGCCCTGGCAAACGAAAGGCGGGATCTTTTTCCGGCGAGGAGTGTTCCCCGAAGGCCAAGAGGATGGTCGGC
TGTTCCCGAGGAGAGGAGGAGATTCCGGCGGCGAAGAAGATGTGGCGGCTGCCGCGGGAGGAGGTCGACCGGATCGTCGA
CTGGTCGCCGTACGTCCCTCCCGCCGTGTACCGAGACCTGAAGCGCGACAACCCGTCGCTTCTGCCATCGCCGGAGGAGG
AGAAGGACGAGCGCACGGTGCTCCTCTACCGGCACGCGCGCGAGTGCTACGAGCATCTGGATAGGTTCGCCGGCTTCCAG
GCCAGGGTCCGCCGCGAGTACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGCCGAGGCCCAGGCGCG
GAGGCGGATCGACCAGGCACGTGGTGAGGCTTTCAGAGCCATCGTTGCTCATCTAAAATCAGAGGTCGTCGTCGACGCCG
ACACGTTCCAGCAACTCGAAAGGAAAATGATGGACGGTTTCTGA---CTGTCTGAAACCAAACTCATC------------
-----TGGCAGTCAGGCCAGTGACTCTTATGTAGTAGTA-------------------CTAGCATTACGAGGGATCTAG-
-----CTAGGTGTATGCTCCGTCCCAA--GTGATCGATTGTGCTTGTTTGTGCCTTGTCACAACATCATTGATCCAATGA
ATGCAATTTGTCGAT-----------------------------------------------------------------
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>chr3A_1_TraesCS3A01G027300
TGCTACTACCAACTATAGGGTTTGTTACCATCATACACAACGGCCGGCCGACG--TTTATTTTTGTTTTTGCTACAACCA
AGTTATTTTTTTGCTGCAACCGGTGACCACAAAAGCTACATCCAGTAAACATTTTTGCTACAATGATGATGACGGGCGGC
AACGATAAGC-TTTTTTTGCTGGAAGCGATAAACTTTTCTGCTACAACCAGCATCGTTTTTTGTTGGAACCAGCAAGAGC
CTCGGGCGGGCACACAACAAGGTACAGAGCGACCTCAATGACAGGTGCTGTGGCCGGTGGTCGGCACCACCGGAGCTGTG
GCCCGGCGGCTGGCACCACCGGAGCTGTGGCCATCTCCC-CCGGAG--------------CTGCAACCACAAGTGCACGT
TGTTGCATGCATGGAGCCGGCGAGAAACGCCAGCGGCGAGGGCGGCCATCGATGGTGACCGACGACGAGGGCGGCGAGGG
CGGCGACCGGTGGTGACCGAAGGCGAGGGCGGCAAGCGGCGGTGAGG---------GGCGGCGGTTCTTCAAGGTTT-GC
TACATCGGCCATCCATGGCGAGTGTTGGCGGCGGCGCTGCTTTTGTTTTTCTCCTCTGCGC--------------TTTAT
TTGGAAAGGAAGCGATTGGGGATCCGGCGGTTAAATATAATCTAATCAAACGGCCGCGCGGTGTTCGGCCAAATTGATTG
CGCCGGTGCGCCGGCGCAGAGTAGTCGCCTTTTAGTACAATCTTGGATAGAAAAAAAATTCTTTCAGCGGTGAACGGATG
AAAAAATTGGCTTTATTATAGGTATATAGGTATATAAAAAGGTATATATAGATACTTATTAGGTATAGATATAAAAATTA
GAAAAAGTTCCTTATAATTAATCACGGTTTTGCACAAAGCGCG---------TGGATCCGAGTGTGACTCAGATAGCCCG
AGCCCGACGCGTGGACGAGG-----CTCAAACCAATATAAGGAGGAGAAAGCCCCCCTCCCCAAAATCGAAAATCGAACG
CGGGCAGCCCCCAATCCAGATCTCAACATCTCCC---GGCGAGTTGAGCAGAAATCAG-ATCAGCCGATGGCCGGCGTCG
AGTGTGTCTGCCCTGGCAAACGAAAGGCGGGATCTTTTTCCGGCGAGGAGTGTTCCCCGAAGGCCAAGAGGATGGTCGGC
TGTTCCCGAGGAGAGGAGGAGATTCCGGCGGCGAAGAAGATGTGGCGGCTGCCGCGGGAGGAGGTCGACCGGATCGTCGA
CTGGTCGCCGTACGTCCCTCCCGCCGTGTACCGAGACCTGAAGCGCGACAACCCGTCGCTTCTGCCATCGCCGGAGGAGG
AGAAGGACGAGCGCACGGTGCTCCTCTACCGGCACGCGCGCGAGTGCTACGAGCATCTGGATAGGTTCGCCGGCTTCCAG
GCCAGGGTCCGCCGCGAGTACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGCCGAGGCCCAGGCGCG
GAGGCGGATCGACCAGGCACGTGGTGAGGCTTTCAGAGCCATCGTTGCTCATCTAAAATCAGAGGTCGTCGTCGACGCCG
ACACGTTCCAGCAACTCGAAAGGAAAATGATGGACGGTTTCTGA---CTGTCTGAAACCAAACTCATC------------
-----TGGCAGTCAGGCCAGTGACTCTTATGTAGTAGTA-------------------CTAGCATTACGAGGGATCTAG-
-----CTAGGTGTATGCTCCGTCCCAA--GTGATCGATTGTGCTTGTTTGTGCCTTGTCACAACATCATTGATCCAATGA
ATGCAATTTGTCGATTCAGAA--------AGAAAGAAAGAATGCAGCTTTTCATCATTGATTTAACAAATATGCCCTGCA
TAACAGCTCAGTTTTGTAGCTTACTGTAGGAATTACCTCTGATTTATCAACCCTGACGACTTGTTAGGATTTATCTC-GA
TTATTACCCCTGTAGTTTTTTACAAGCACATA----CTTGTTACTTTATCATGAATGGATTGCTACACCATGAGAGATTT
GCACATTATTTTCAGAGAAAATGGTCGTCCGTCGGTAAGGTACGGCTATATATTGGAAGCAACAGAGTACAAAATAGAGA
GGAGCTTCAGTCAGAAGCTCAGCAAATTTTTTGGAGATGGAAGAGTTCTGCTTGCACGTTATTGTCATGGGCATGGTCAT
TTTCTTGTTATAATAGGCATCA----GAGTTGTGTCCTCCTGTTTTCACAAGAGCATGATTGTAACCCTGCAACA--ATA
CTCCAGTGAATGCA---------------TGTCCCGATTCAACAAAAAGAAGCAGCTGATGAACAAACAGAGTTTGTTTC
TGTACCTTGTTAGTGTCCTGTAGTTCAGTAAATTTTTCTGACAGCGTTGATGCATACGTACTTGTTTCAGTTATACTGCA
ACCTGATGCATTTGTCTCTTTTGAGGACATTGGCACATCTGTGCTTCACACT--AACTTACCATTTGTATTTGTATTTT-
ATTTTTATTTGTAATTCATCACATTGCTGATGTCTGTTATTTTCCCTGTACATGGCCATATGCCCACATACAGGTTCTGT
TGCAACGTCTGGAGCTGTGCATGTGCTATCTTCTCGCACGACTGCACTGATTCATCTCCAGGCCTTGCGATGGTGCCATT
ACCCTGGAAAAGAGGCAAGAGTTTCTGTTCCAAGCTCTAGTTT-------------------------------------
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-----------------------------------------TCAGGTCCAGATGGATA-ATAGATCACCAAGTTTTGGAA
CTGGGTGCAGTGCCCTGCTTAACGAAGTTGAACATTCACTTCTTTTCCTTGATGAGATGTACCTCTGAATCTGGTAGGGC
GCTGTCAATCG
>chr7D_1
TGCTACCACCGGCTACAGGGTTTGTTACCACCATACACAACGGCCGACAGATG--TTT-TTTTTGTTTTTGCTACAACCA
TGTCATTTTTTTGCTGCAACCGGCAACCACAAAAGCTATATCCAGTAAACATTTTTGCTACAATGACGACGGCAGGCAGC
AGCGGTAAGCTTTTTTTTGCTGGAAGCGATAAATTCTTTTGCTACAACCGACATCGTTTTTTGTTGGAACCAGCAAGGGC
CTCGGGCAGGCACACGGCAAGGTACAGCGTGCCCTCAATGACAGGTGCTGCGGCCGGCGGCCGGCACCACCGGAGCTGC-
----------------------------GGCCATCTCCC-CCGGAG--------------CTGCAACCACAAGTGCATGT
TGTTGCATGCATGGAGCCGGCGAGAAACGCC--------------------------------------GGCGTCGAGGG
CGGCCACCGGTGGTGACCGACAGCGAGCG--------------------------CGGCGGCGGTTCTTCAAGGTTT-GC
TACATCGGCCATCCATGGCGAGTGTTGGCGGCCGCGCTGCTTTTGTTTTT-TCCTCTACGC--------------TTTAT
TTGGAAAGAAAACGATTCGGGGTCTGACTGTTAAATATAATCAAATCAAACGGCCGCGCGGTGTCCGGCCGAATTGATTG
CGCCGG--------------------------------------------------------------------------
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>chr6A_2
-GCTACCACCGGCTATAGGGTTTGTTACCACCATACACAGCGGCCGGCCAGTGTTTTTCTTTTGTGTTTTGCTACAGCCA
TGTCATTTTTT-GCTGCAGTCGGCAACCACAGAAGCTACATCGGGTTAACATTTTTGCTACAATGACGATGGCGGGCTGT
AGCGGTAAGC--TTTTTTGCTGGAAGCGATA--CTTTTTTGCTACAACAGGTATCGTTTTTTGTTGGAACCAGCAAGAGC
CTCGGGAGGGCACACGGCGAGGTACAGCGCGACCACAACGACAGGTGCTGCGGCCGGCGGCCGGCGCTACCGGAGATGC-
----------------------------GGCCATGTCCC-C-GGAGCCGGAGATGCAAGCCTGCAACCACGAGTGCATGT
TGTTGCATGCATGAAGCCGATGAGAAACGCA--------------------------------------GGCGGCGAGGG
CGGCGACCGGCGGTGACCGACGGCGAGGGCAGCGACCAGAGGCGAGGGTGGCGACCGGCGGCGGTTCTTCAAGGTTTTGC
TACATCGGTCGTCCATGGCTAGTGTTGGCGGCGGCGCTGC-TTTGTTTTC-CCCTCTGCTGTTTGGTTGAATCCGTTTAA
TTGGAAAGAAAACGATTCCAGATCTGATGGTTAAATGCAATCTAATCAAACGGCCGCGCTGTGTCCAGCCGAATTGATTG
CGCCGGTGCGCCGGTGCAGATTAGTCGCCTTT------------------------------------------------
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>chr6A_2
-GCTACCACCGGCTATGGGGTTTGTTACCACCATACACAGAGGCCGGCCGGCGTTTTTCTTTTGTGTTTTGCTACAACCA
TGTCATTTTTT-GCTGCAGTCGGCAACCACAGAAGCTACATCGGGTTAACATTTTTGCTACAATGACGATGGCGGGCTGT
AGCGGTAAGC--TTTTTTGCTGGAAGCGATA--TTTTTTTGCTACAACCGGTATCGTTTTTTGTTGGAACCAGCAAGAGC
CACGGGAGGGCACACGGCGAGGTACAGCGCGACCACAACGACAGGTGCACCGGCCGGCGGCCGGCGCTACCGGACATGC-
----------------------------GGCCATGTCCCCC-GGAGGCGGAGATGCAAGCCTGCAACCACGAGT------
----------------------------------------------------------------------GCGGCGAGGG
CGGCGACCGGCGGTGACCGACGGCGAGGGCGGCGACCAGCAGCGAGGGTGGCGACCGGCGGCGGTTCTTCAAGGTTTTGC
TACATCGGTCGTCCATGGCTAGTGTTGGCGGCGGCGCTGC-TTTGTTTTC-CCCTCTGCTGTTTGGTTGAATCTGTTTAA
TTGGAAAGAAAACGATTCCAGATCTGACGGTTAAATGCAATCTAATCAAACGGCCGCGCTGTGTCCAGCGGAATTGATTG
CGCCGGTGCGCCGGCGCAGATTAGTCGCCTTT------------------------------------------------
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>chr6A_2
-GCTACCACCGGCTATAGGGTTTGTTACCACCATACACAGCGGACGGCCGGCGTTTTTCTTTTGTGTTTTGCTACAACCA
CGTCATTTTTG-GCCGCAGTCGGCAACCACAGAAGCTACATCGAGTTAACATTTTTGCTACAATGATGATGGCGGGCTAT
AGCGGTAAGC--TTTTTTGCTGGAAGCGATAAACTTTTTTGCTACAATAGGTATCGTTTTTTGTTGGAACCAGCAAGAGC
CTTGGGAGGGCACACGGCGAGGTACAGCGTGACCACAACGACAGGTGCTGCGGCTGGCGGCCGGCGCTACCGGAGATGC-
----------------------------GGCCATGTCCC-CCGGAGCCGGAGCTGCAAGCCTGCAATCACGAGTGCATGT
TGTTGCATGCATGAAGCCGATGAGAAACGCA--------------------------------------GGCGGCGAGGG
C-----------------------------GGCGACCAGCGGCGAGGGTGGCGACCGGCGGCGGTTCTTCAAGGTTTTGC
TACATCGGTCGTCCATGACTAGTGTTGGCGGCGGTGCTGC-TTTGTTTTC-CCCTCTGCTGTTTGGTTGAATCCGTTTAA
TTGGAAATAAAATGATTCTAGATCTGACGGTTAAATGCAATTTAATCAAACGGCCGCGCTGTGTCGGGCCGAATTGATTG
CGCCGGTGCGCCGGCGCAGATTAGTCGCCTTT------------------------------------------------
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>chr3A_849
CTTTAG--------------------------------------------------------------------------
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-----------------TTAATCACGGTTTTGCACAGAGCGTCATTTCGGTTTGGCTCCGAGTGTGACTGAGATAGTCCG
A------CGCGTGAACGGGG-----CTTAAACCAATATAAGGAGGAGCAAGCCT-CCTCCCCAAAATCGAAAATCGAACG
CGGGCAGCCCCCAATCCAGATCTCAACATCTCCC---GGCGAGTTGAGCAGAAATCAG-ATCAGCCGATGGCCGGCGTCG
AGTGTGTCTGCCCTGGCAAACGAAAGGCGGGGTCTTTTTCCGGCGAGGAGTGTTCCCCGAAGGCCAAGAGGATGGTCGGC
TGTTCCCGAGGAGAGGAGGAGATTCCGGCGGCGAAGAAGATGTGGCGGCTGCCGCGGGAGGAGGTCGACCGGATCGTCGA
CTGGTCGCCGTACGTCCCTCCCGCCGTGTACCGAGACCTGAAGCGCGACAACCCGTCGCTTCTGCCATCGCCGGAGGAGG
AGAAGGACGAGCGCACGGTGCTCCTCTACCGGCACGCGCGCGAGTGCTACGAGCATCTGGATAGGTTCGCCGGCTTCCAG
GCCAGGGTCCGCCGCGAGTACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGCCGAGGCCCAGGCGCG
GAGGCGGATCGACCAGGCACGTGGTGAGGCTTTCAGAGCCATCGTTGCTCATCTAAAATCAGAGGTCGTCGTCGACGCCG
ACACGTTCCAGCAACTCGAAAGGAAAATGATGGACGGTTTCTGA---CTGTCTGAAACCAAACTCAG----ATGTCTGAT
GCTGTTGGCAGTCAGGCCAGTTACTCTTATGTAGT----------------------------ATTATGAGGGATCTAG-
-----CTAGGTGTATGCTCCGTCCCAA--GTGATCGATTGTGCTTCTTTGTGCCTTGTCACAACGTCACTGATCCAATGA
ATGCAATTTGCCGATTC------------AGAAAGAAAGAATGCAGCTTTTCATCATTGATTTAACA-------------
-----GCTCAGTTTTGTAGCTTACTGTGGGAATTACCTCTGATTTATCAACCCTGACGACTTGTTAGGATTTATCTCTGA
TTATTACCCCTGTAGTTTTTTACAAGTACATA-GTACTTGTTACTTTATCATGAATGGATTACTACACCATGAGAGA-TT
GCACATTACTTT--GAGAAAA----CGGCTGTCCGTAAGGCCCAGCTATATATTGAAAGGAACGGAATAGAAAACAGAGA
GGAGCCTCAGTCAGAAGCTTAGCAATGATTTTCGAGATGAAAGAGTTCTGCTTGCACGTTGTTGTCATGGACACGGTCGT
TTTCATGTTATGATAGGCATCG----GAGTTGTGTCCTCCTGTTTTCACAAGAGCATGATTGTAACCCTGCAGTAATATA
CTCCAGTGAATGCAAGCAGAGTTTGTTTTTGTCCCGACTCAACAAAAAGAAGCAGCTGATGAACAAACAGAGTTTGTTTT
TGTACCTTGTTAGTGTCCTGTAGTTTAGTAAATTTGTCTGACAGCGTCGATGCA----TACTTGTTTCAGTTATACTGCA
ACCAGATGCATTTGTCTCTTTTGAGGACATTGGCACATCGGTGCTTCACACT--AACTTACCATTTGTATTTGTATTTTT
ATTTTTATTTGTAATCCATCACATTGCTGATGTCTGTTATTTTCCCTGTACATGGCCATATGCCCACATACAGGTTCTGT
TGCAACGTCTGGGGCTGTGCATGTGCTATCTTCTCGCACGACTCCACTGATTCATCTCCAGGCCTTGCGATGGTGCCATT
GCCATGGAACCGAGGCAAG-GTTTCTGTTCCAAGCTCTAGTTTGCTGTACTGACAATTTGTCTTCCAAGATTGTTCGCTT
TTATAGTTCGAAACTATATGCATTGATGTGGATATTGGGGCTTGTTTATTTTGCTACTGCTTTTTAGGGCCATATGCTTC
ATTGGTTAGATCTGTCTGGCCATAGTGGTTAGCCATCATCTTCAGGTCCAGTTGGATATATAGATCACCAGTTTTTGGAA
CTGGGTGCAGTGCCCTGCTTAACAAAGTTGAATATTCACTTATTTTCCTTGGTGAGATATACCTCCAAATCTGGTAGGGC
GCTGTTAATCG
>chr3D_913
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---CCGACGCGTGGACGGGGCTCACCTCAAACCAATATAAGGAGGAGCAAGGCC-CCTCCCCAAAATCCAAAATCGAACG
CGGGCAGCCCCCAATCCAGATCTCAACATCTCCC---GGCGAGTTGAGCAGAAATCAGAATCAGCCGATGGCCGGCGTCG
AGTGTGTCTGCCCTGGCAAACGAAAGGCGGCGTCTTTTTCCGGCGAGGAGTGTTCCCCGAAGGCCAAGAGGATGGTCGGC
TGTTCCCGAGGAGAGGAGGGGATTCCGGCGGCGAAGAAGATGTGGCGGCTGCCGCGGGAGGAGGTCGACCGGATCGTCGA
CTGGTCGCCCTACGTCCCTCCCGCCGTGTACCGAGACCTGAAGCGCGACAACCCGTCGCTTCTGCCATCGCCGGAGGAGG
AGAAGGACGAGCACACGGTGCTCCTCTACCGGCACGCGCGCGAGTGCTACGAGCATCTGGATAGGTTCGCTGGGTTCCAG
GCCAGGGTCCGCCGCGAGTACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGCCGAGGCCGTGGCGCA
GAGGCGGATCGACCAGGCACGTGGTGAGGCTTTCAGAGCCATCGTTGCTCATCTTAAATCAGAGGTCGTCGTCGACGCCG
ACACGTTCCGGCAACTCAAAAGGAAAATGATGGACGGTTTCTGA---CTGTCTGAAACCAAACTCATC------------
-----TGGCAGT---------TACTCTTATGTAGTACTCCCTCCGTCTCAACTCGACTCTAGTATTATGAGGGATCTAG-
-----CTGGGTGTATGCTCCGTCCCAA--GTGATCGATTGTGCTTGTTTGTGCCTTGTCACAGCATCATTGATCCAATGA
ATGCAATTTGCCGATTCAGAAAGAAAGAAAGAAAGAAAGAATGCAGCTTTTCATCATTGATTTAACAAATATGCCCTGCA
TAACAGCTCAGTTTTGTAGCTTACTGTGGGAATCTCCTCTGATTTATCAACCCTGACGACTTGTTAGGATTTATCTCTGA
TTATGACCCCTGTAGTTTTTTACAAGCACATAAGTACTTGTTACTTTATCATGAATGGATTGCTACACCATGAGAGATTT
GCACATTATTTTCAGAGAAAA----CGGCTGTCCGTAAGGCCCAGCTATGTATTGAAAGGAACGGAATACAAAACAGAGA
GGAGCTTCAGCCAGAAGCTCAGCAATGTTTCTCGAGATGAAAGAGTTCTGCTTGCACGTTATTGTCATGGACATGGTCAT
TTTCTTGTTATAATAGGCATCGGATCGAGTTGTGTCCTCCTGTTTTCACAAGAGCATGATTGTAACCCTGCAACA--ATA
CTCCAGTGAATGCAAACAGAGTTTGTTTTTGTCCCGATTCAACAAAAAGAAGCAGCTGATGAACAAACAGAGTTTGTTTT
TGTACCTTGTTAGTGTCCTGTAGTTTAGTAAATTTGTCTGACAGCGTTGATGCA----TACTTGTTTCAGTTATACTGCA
ACCAGATGCATTTGTCTCTTTTGAGGACATTGGCAAATCGGTGCTTCACACTATAACTTACCATTTGTATTTGTATTTG-
-----TATTTGTAATTCATCACATTGCTGATGTCTGTTATTTTCCCTGTA------------CCCACATACAGGTTCTGT
TGCAACGTCTGGAGCTGTGCATGTGCTATCTTCTCGCACGACTGCACTGATTCATCTCCAGGCCTTGCGATGGTGCCATT
GCCATGGAACCGAGGCAAG-GTTTCTGTTCCAAGCTCT------------------------------------------
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>chr3B_988
GCAGCC--------------------------------------------------------------------------
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--------CCCAAATCCAGATCTCAACATCTCCCGGGGGCGAGTTGAGCAGAAATCAGA-TCAACCGATGGCCGGCGTCG
AGTGTGTCTGCCCTGGCAAACGAAAGGCGGCGTCTTTTTCCGGCGAGGAGCGTTCCCCGACGGCCAAGAGGACGGCCGGC
TGTTCCCGAGGAGAGGAGGCGATTCCGGCGGCGAAGAAGATGTGGCGGCTGCCGCGGGAGGAGGTCGGCCGCATCGTCGA
CTGGCCGCCGTACTTCCCTCCGGCCCTGTACCGAGACCTGAAGCGCGACAACCCGTCGCTTCTGCCATCGCCGGAGGAGG
AGAAGGACGAGCACAGGGTGGTCCTCTACCGGTACGCGCGCGAGTTCTACGAGCAGATGGAGGAGTTCGCCGGGTTCCAG
GCCAGGGTCCGCCGCGAGTACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGCCGAGGCCGTGGCGCA
GAGGCGGGTCAACCAGGCACGCGGTGATGCTTTCGGAGGCATCTTTGCTCATCTTTCTTCAGAGTTCGTCGTCGACGCCG
ACACGTTCCGGCAACTCAAAAGGAAATGGATGGA----------------------------------------------
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>chr3B_1166
CGGGG---------------------------------------------------------------------------
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-------------------------------CGAAGAAGATGTGGCGGCTGCCGCGGGAGAAGGTCGACCGGATCGTCGA
CTGGTCG---------CCTCCCGCCGTGTACCGAGACCTGAAGCGCGGCAACCCGTCGCTTCTGCCGTCGCCGGAGGAGG
AGGAGGACGAGCCAACGGCGCTCCTCTACCGGCGCGCGCGCGAGTG-TACGAGCACGTGGAGGAGTTAGCCGGGTTCCAG
GCCAGGGTCCGCCGCGAGCACGCCTCCAAAGGATTCGTGGAGGTCGACTACGACTGCGTCGGCGGCGAGGCCTAGGCGCG
GAGGCGGGTCAACCAGGCACGTGGTGAGGCTTTCGGAGCCATCGTTGCTCATCTTTCTTCAGGCGTCCTCGTCGACGCCG
GCACGTTCCGGCAACTCAGGAGGAAAATGATGGACGGTTTCTGAGTTCTGACTGAAACCCAACTCGATCATATGTCTGAT
GCTGTTTGCAGTCAGACCAGTGGCTCTAATGGAGTATTA-------------------TTA---TTATGAGGGAGCTAGC
TAGGCCTAGGTGTATGCTCCGTCCCAAAAGTGATCGATTATACTGGTTTGTGCCCTGTCACAGCATGACTCATCCGATCA
GTGCAATATGTCGATTTCAGAAAAAAGAAAGCAAAGCAGC----------------------------------------
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>SNPs
------S---SS------------------S---------------------------S---------------------
S--S-------------------SS----------------------------------------------S-----S--
-S--S---------------------------------S----------S------------------------------
---------------SS----------S----------------------S------S--S-----------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------S--
-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------------S------------S-S-S----S-------------------------------------
--------------------------------------------------S-----------------------------
--------S--S-----S------S-S-------------------------------------S-----S---------
--------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS-------------------S----SS------------S-------------S------S---
-SS--------------S-----------------------------S------S-------------------------
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-------------------------------S------------------------------------------------
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------------------------------------S-------------------------S----S------------
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---------------------------S----------------------------------------------------
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---------------------SSSS--S-S---S------SS-S-----------S---S---S--S-------S-----
-------------------------SS-----S------S------------------------------S---------
---------------------S----------------------------------------------------------
-------------------------------------------------------------------------------S
-------------------------S---------S------------------SSSS----------------------
---S-----------------------------------S----------------------------------------
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S--S-----SS--------S------------------------------------------------------------
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---------------------------------------------------S------------------SS--------
-----------------------S--------S--------S---------S------S------SS-------------
-----S-----
>forward_963
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---------------------------------------------------------------GTGACTCAGATAGCCCG
AGC-----------------------------------------------------------------------------
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>reverse_2104
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-----------------------GTCGTCCGTCGGTAAGGTAC-------------------------------------
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