>input_sequence_69902
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-------------------------ATGGCGGCCGTGAAGCTGCTCAATTGCTTCGTCAGCCCGTTCGGCAATAGGGTGC
GGATCGCGCTGGCGAAGAAGGGCGTGGAGTACGAGGAGACGGCCGAGAACATGGTCACCAAGGGCCCGCTGCTGCTGTCG
TCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCCTCGTCGACGGCAAGGCCGTCTGCGAGTCCCTGGTCATCCTCGAGTT
CATCGACGAGGCGTTCGCCGGCACCGGCGCGCAGCTCCTCCCCGCCGACGCCTACGCGCGCGCCAACGCCCGCTTCTGGG
CCGCCTACGTCGATGCCAAGGTAGAGTCTACATCCACTGATTCAGCTGCTTACGAAGCTGCTCTCGTAACTCGTAAATCA
TGACTCGTGTGTGCGTGCAGATGCCGGAGTGCGCCGGGAAGATCTGGAAGGTGCCGAAGGGCGCGCCGGCGGTGGAGGAG
GGGAAGAAGGAGATGGTGGGCGTGTTCAAGACGCTGGAGGGGGAGCTGGGCGAGAAGCCCTACTTCGGCGGCGAGGCGCT
CGGGTACGCGGACGTGGCGCTGGTGACCTTCACCCCGTGGTTCCTGACGTACGAGCGGCTCGCCGGGTTCAGCATCGCGG
AGGAGTGCCCCAAGCTGACGGCATGGGCGGCGCGGTGCGTCGGGGAGAACGAGTGCGTGGCCAAGTCGCTGCCGGACGCC
GAGGCCGTGTACCAGTTCGTGGGCGGCATGAGGAAGCACTTTGGCCTCGAGTAG--------------------------
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>chr5D_1_TraesCS5D01G384400
TAAGAAAACAAAAAAAAAAAAATCGATGAAACGCTCGTGCTACGCTCTACCTTAGCCACCCGGTTGCCCCTTTGTATTAC
A-GGGTTATCCTTCACACTGAGTGAAGAATAGTATTTTCCACAATCAGCGACACAGACACACTAGGTTGTGGTGGGCTCT
TTTTGAGGGAAGGTTGTGGTGGACTCTTTGGCTAACTTGTTTCTTCAACTGAATGGACATTTGGCCCAACATGGCGA-GG
TGGAGTTTTGGCACCTATGTTGAATGTTGA---------------------------------GTTACCGGGCGGCCGTT
CCAATTTTTTCGACAAAGGGTTGATTTTATTGACTCCAAATGAAGCATCAAGTGGATACAACACAATCAACACACACCC-
TGCATATGCATAGCTACGATGCACACAACTAACACAATCAAATACGCACAC-AAATAAACACACCAGTAAGTAGCAAAGT
CATAAAAGATCAAAGTCATGCCTAAGTGAGGACCAAAAAACTTGGAAGCAATCAAAATACCTAAATTGATATAGTGACCT
CAAACCCTGATATATTGATATTTTTTTAGAAAGGCAAGCATACCTACATTGAGCTTACCTCCATCGGCCAGCTGCAGGGA
CAAGATCACAAAGAACATAGCTGGCTCCGAAGCATGATG------------TACATG--CAAATGACGCCATCCGGAGCG
ACACCGAGAAAGCTAATCT-CCGTCTGGCCCCATGCATCTCTAAGAAATTA---ACGTACAAATTTCAACGACGTGAGCA
AAGCCAGTCCTTCGATGAAACCGATCTGCACATA--CTGATGTTTATTCCTGCTTGCTAGCGCGCACCGAAGCAAGCTAG
GGAC----AAACAAACAGAAACACCGAA---AGGAGACGTTTCTCACGAGGTCGTAACCAAATGTGCCATGCAGCATTCT
GACCCTACATATACGCCCCCAGTCGACCGAGGAAACATCAACGCAAACACGCGCCATAAGCCCATAACCCTAACCAGACC
CTGATTAACTAGCTCGTT-AAGGCAATGGCGGCCGTGAAGCTGCTCAATTGCTTCGTCAGCCCGTTCGGCAATAGGGTGC
GGATCGCGCTGGCGAAGAAGGGCGTGGAGTACGAGGAGACGGCCGAGAACATGGTCACCAAGGGCCCGCTGCTGCTGTCG
TCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCCTCGTCGACGGCAAGGCCGTCTGCGAGTCCCTGGTCATCCTCGAGTT
CATCGACGAGGCGTTCGCCGGCACCGGCGCGCAGCTCCTCCCCGCCGACGCCTACGCGCGCGCCAACGCCCGCTTCTGGG
CCGCCTACGTCGATGCCAAGGTAGAGTCTACATCCACTGATTCAGCTGCTTACGAAGCTGCTCTCGTAACTCGTAAATCA
TGACTCGTGTGTGCGTGCAGATGCCGGAGTGCGCCGGGAAGATCTGGAAGGTGCCGAAGGGCGCGCCGGCGGTGGAGGAG
GGGAAGAAGGAGATGGTGGGCGTGTTCAAGACGCTGGAGGGGGAGCTGGGCGAGAAGCCCTACTTCGGCGGCGAGGCGCT
CGGGTACGCGGACGTGGCGCTGGTGACCTTCACCCCGTGGTTCCTGACGTACGAGCGGCTCGCCGGGTTCAGCATCGCGG
AGGAGTGCCCCAAGCTGACGGCATGGGCGGCGCGGTGCGTCGGGGAGAACGAGTGCGTGGCCAAGTCGCTGCCGGACGCC
GAGGCCGTGTACCAGTTCGTGGGCGGCATGAGGAAGCACTTTGGCCTCGAGTAGCTTTGCTCGATCCGCCAGCTGCGTAC
GTCAGTATGATGATGAGTACAATTAATAAGCTAGCCGGGTGGCCGGCCGGCCGGC---------AATCAGCACTCGCACG
TACGTGTCGCATGCGTCGTCGCGCATGCATGCATGCCTGTGCGCAAGTGCAGTCGTGCGTCTCCTTGTC-GACTGCACTG
TTGTTTCCTCCGTCCGTCTCAGTCGTTTGTGCTTTT-------------ATTA----TTTGGGTACTGCTGGCTCCGTGC
TTTGTGCTCGGCCGGCGACCA-----------------------GTTCATGGACCGTCCCGCCCCTGTAACCTGTGTGCC
GGATCAAGGAATAAAAAACAGGCATGACACATGTTGTTCTGTTCTGTTACCATCCATA----------------------
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------------------------------TTTTTAGTTAATATTTCAATTTCAGTTTATTTCACACTGCAAAATCAGTT
TCACAGATTTTTAGTTAACCAGTTTAAAAA-CAGACTTCACTCATTTCCAAGCAGTGATTTTGGCCTATTCAC-AAAAAA
AATTCACTCATTTCAAAACAGATGTCACTGATTTTGAAAACCGAATTCACTCTGTTTTAAAAAATTATTTCACTCAATTC
AGAAAATGATTTTACTCCTTAAAAATCAGATTTCACACATTTTGAAAATGGATTTCCTAATTTCAAAAAATAGTTTTCAC
TCATTTCAAAGAACTGATCCCGCTCAATTCAAAAAGTAATTTCACTCAATTAATAAAATAATGATTTCACTCATTCCAAA
AGCTAATCTCGTTCAATTAAAAAAACAGATTTCACACATTTCCATAAAAGTACTCATTCCCAAAGACTAATGTCACTAAA
AAAAAACTATTTTCACTCATTTCATAAAACTAATTTTGCTGCGTACCAAATAAAATCACTCATAAAAAACTAATTTAATT
TATTTTGACACA--AATTTCACTCAATTTAAAAAATGATTTCACTGAATTAAAAATAACAATAATTCCACTCATTTTTTA
AAACAGATTTCACTCGTTTCAAATAACATAATTTACTCAT
>chr5A_31
ACGCTT------------------------------GTGCTACGCTCCATCTTAGCCACGCAGTCGCCCCTTTGCATTAC
ATGGGTTATCCTTCACATTGAGTGGAGAATAGCATTTTCCACAATCAACGACATAGACACACTAGATTGTGGTGGGCTCT
TT-TGAGGGAAGGCTGTGGTAGGCTCTTTG-CTAACTTGTTTCTTCAACCAAATGGACATTTGGCCCAACATGGTAAGGG
TGGAGTTTTGGCACCTATGTTGAATGTTGA---------------------------------GATACCAGGTGGCAGGT
CCAATTTTTTCAACAAAGGGTTGATTTTATTGACTCCAAATAAAGCATCAAGCGGATACAACACAATGAACACACACCC-
TGCATATGCATAGCTAGGACACACACAACCAACACAATCACATACACATATTAAATAAACATGCCGATAAATAGCAAAGT
CATAAAAGACCATAGTCATGCCTAAGCAAGGG-CAAAAAACTTGGAAGCAATCAAAATACCTAAATTGGTATATTGACCT
CAAACCCTGATATACTGATATAT----------GCAATCATACCTACATTGAGCTTACCTCCATCGGCTAGCTGGAGGGA
CAAGACCACAAAGAACATAGCTGGCTCCGAAGCATGACTTATAGTCTTATATACATG--CAAATGACGCCATCCGGAGCG
ACACCGAGAAAGGTAAGCTCC-GTCTGGCCC----CATCTCTAAGAAATTATTAACGAACAAATTTCAACGACGTGAGCA
AAGCCAGTCCTTCGATGAAACCGATCTGCACATA--CTCATGCTTATTCCTGCTTGC------------------GCTAG
GGACAAGAAAGCAACCAAAAACACCGAA---AGCAGACGTTTCTCACGAGGTCGCAGCAAAGTGTGCCAT---GCATTCG
GACCCTACATATACGCCCCCAGTCGACCGAGAAAATACCAACGCAAACACACGCCATAAGCCCATAACCTTAACCAGACC
CTGATTAACTAGCTCATCAAAAGCAATGGCGACCGTGAAGCTTCTCAACTGCTTCGTCAGCCCGTTCGGGAACAGGGTGA
AGATCGCGCTGGCGAAGAAGGGCGTGGAGTACGAGGAGACGGCCGAGAACATGGTCGCCAAGGGCCCGCTGCTGCTGTCG
TCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCCTCGTCGACGGCAAGGCCGTCTGCGAGTCCCTCGTCATCCTCGAGTT
CATCGACGAGGCCTTCGCCGGCACCGGCGCGCAGCTCCTCCCCGCCGACGCCTACGCGCGCGCCAACGCCCGCTTCTGGG
CCGCCTACGTGGACACCAAGGTAGAGTCTACATCCACTGATTCAGCTGCTTACGAAGCTGCTC---------GTAAGCCA
TAACTCGCGTGTGCGTGCAGATGCCGGAGTGCGCCGGGAAGATCTGGAAGGTGCCGAAGGGCGCGCCGGCGGTGGAGGAA
GGGAAGAAGGAGATGGTGGGCGTGTTCAAGACCCTGGAGGGGGAGCTCGGCGAGAAGCCCTACTTCGGCGGCGACGCGCT
CGGGTACGCGGACGTGGCGCTGGTGACCTTCGTCCCCTGGTTCCTGACGTACGAGCGGCTCGCCGGGTTCAGCATCGCGG
AGGAGTGCCCGACGCTGACGGCCTGGGCGGCGCGGTGCGCCAAGGAGAACGAGTGCGTGGCCAAGTCGCTGCCGGACGCC
GAGGCCGTGTTCCAGTTCGTGGGCGGCATGAGGAAGCACTTTGGCCTCGAGTAACTTTGCTCGATCCGCCAGCTGCGTAC
GTCCGTATGATGCGTAC-------AATAAGCTAGCCGGCTAGCCGGCCGGCAATGGGCAATCTGAATCAGCACTTGCACG
TCT-------------------------------------------GTGCAATCGTGCGTCTCCTTGTCAGACTGCACTG
TTGTTTCCTCCGTC----TCAGTCGTTTGTGCCTTTTATCTTTATTATTATTA----TTTGGGTACTGCTGGCTCCGTGC
TTTGTGCTCGGCCGGCGA--------------------------------------------------------------
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>chr5B_130
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--------------------------------------------------ACATAGACACACTAGGTTGTTGTGGGCTGT
TTTTGAGGGAAGGCCGTGGTAGGCTCTTCGGCTAACTTGTTT-----ACAGAATGGACATTTGGCCCAATATGGCCAGGG
TGGAGTTTTGGCACCTATGTTGAATGTTGATATTTCCCCAAAAAAAAATCTGTTGAATGTTGAGATACCAGGAGGCAGAT
CTGAATTTTTTGACATAGGGTTGCTTTTATTGACTCCAAATGAAGTATCAAGTTGATACAACACAATGAACACACACCCA
TGCATATGCATAGCTAGGATCTACACATCCAACACAATCACATTCACACAC-AAATAAACACGCCGGTAAATAGCAAAGT
CATAAAAGACCAAAGTCATGCCTAAGCGAGGA-TAAAAAACTTCAAAGCAATAAAAATACCTAAATTGATATATTGACCT
CAAGCACTGATATATTGATGT----------AGGCAAGCATACCTACATTGAGCTTACCTCCATCGGCTAGCTGCACGGA
CAAGATCACAAAGAACATAGCTGGCTCCGAAGCATGATG------------TACATGCACAAATGACGCCATCCGGAGCG
ACACCGAGAAAGCTAATCT-C-GTCTGGCCC----CATCTCTAAGAAATTA---ACGTACAAATTTCAACGACGTGAGCA
AAGCCAGTCCTTCGATGAAACCGATCTGCACATATACTGATGTTTATTCCTGCTTGCTAGCTTGCACCGAAGAAAGCTAG
GGAC----AAGCAAACACAAACACCGAAGGGAGGAGACGTTTCTCACGAGGTCGCAACCAAATGTGCAATGCAGCATTCT
CACCCTACATATACGCCTCCAGTCGGCCGAGAAAACACCAACGCAAACACGCGCCATAAGCCCATAACCTTAACCAGACC
CTGATTAACTAGCTCGTT-AAGGCAATGGCGGACGTGAAGCTTCTCAACTGCTTCGTCAGTCCGTTCGGAAACAGGGTGC
GCATCGCGCTGGCGAAGAAGGGCGTCGAGTACGAGGAGACGGCCGAGAACATGCTCACCAAGGGCCCGCTGCTGCTGTCG
TCCAACCCCGTCCACGCCAAGGTCCCCGTCCTCCTTGTCGACGGCAAGGCCGTCTGCGAGTCCCTGGTCATCCTCGAGTT
CATCGACGAGGCGTTCC------CCGGCGCGCAGCTCCTCCCCGCCGACGCCTACGCGCGCGCCAACGCCCGCTTCTGGG
CCGCCTACGTGGACACCAAGGTAGAGTGTACATTCACTGATTCAGCTGCATACGAAGCTGCTCTCATAACTCGTAAATCA
TGACTCGTGTGTGCGTGCAGATGCCGGAGTGCGCCGGGAAGATCTGGAAGGTGCCGAAGGGCGCGCCGGCCGTGGAGGAG
GGGAAGAAGGAGATGGTGGGCGTGTTCAAGACGCTGGAGGGTGAGCTCGGCGAGAAGCCCTACTTCGGCGGCGACGCGCT
CGGGTACGCGGACGTGGCGCTGGTGACCTTCACCCCGTGGTTCCTGACGTACGAGCGGCTCGGCGGGTTCAGCATCGCGG
AGGAGTGCCCCAAGCTGACGGCCTGGGCGGCGCGGTGCATCGGGGAGAACGAGTGCGTGGCCAAGTCGCTGCCGGACGCC
GAGGCTGTGTACCAGTTCGTGGGCGGCATGAGGAAGCACTTTGGCCTCGAGTAGTTTTGCTCGATCCGCCAGCTGCGTAC
GTCGGTATGATGAGCAG-------AATAAGCTAGCCGGGTGGCCGGCCGGCCGGC---------AATCAGCACTTGCATG
CCTGC-----------------------------------GCGCAAGTGCAATCGTGCGTCTCCTTGTC-GACTGCACTG
TTGTTTCCTCCGTCCGTCTCAGTCGTTTGTGCTTTT-------------ATTATTTGTTTGGGTACTGCTGGCTCCGTGC
TCTGTGCACGGCCGGCGATTGATTTCTAGTTTCTCAGTAGCGTCGTTCATGGACCGTACCGCCCCTGTAATCTGTGTACC
GGATCAAGGAATAAAATACAGGCACGACACATGTTGTTCTGTTTTATTGCCATCCAATCGTTCCAGCGTGTGTGAGTTTG
TTTGCGGCGAAATCAATCAAGCTCCTTCCGAGGCTGCCGAACAAATGCCATCAATCGGTGGACAGAGGATAAACTTGCTT
GCATGCAAGAACTTTGTACCATTGCGTAATTCTGAATTGCATTTCTTATTCTTCGGTTATGCCTTTTGGCATCGTATTTG
AAATTTTAAGTTTCGAATTACTCCCTCCGTCCCATAATATAAAAGCGTTTTTGAAGGACAATGATTAAGGTATCTATCTG
CTCGAGCGTATGAGCTGGCTAAAGTCAACAAGAAAGATGCGTGTAGGCGCGGGCGAGGTGTAACGCGGCTTGTATAGGCC
GAGAAAATGGTTTTTATATCCGCAAGTTTTTTTTTCGTGTAACGGTGAAGAATCAATTGGCAAATGATTTTTGTTGCGCA
ATACAGAGAGTGGAGATGAAATGCAACCGTTGCATGTCAGGTTTGTATCAGCTCTTAGTTATGAGATAGAGTGGTCGAGT
GGAGAAAAGACGGCCGCGTGATTTCTTTCTTTCTTAAAAAAGACTTCTATTTTATTTTACTTAGTT------AACCAGTT
TCAC------TTAGTTAACCAGTTTCAAAAACAGACTTCACTCATTTCCGAGCAGTGATTTCGGCCTATTCATAAAAATA
ATTTCACTTACTTCAAAACAGGTCTAACTAATTTTGGAAACCAAATTCACTCAATTTTTTAAATA---TTCACTCAATTC
AAAACATGATTTTACTCCTTAAAAAACTGATCTAATAAAA----------------------------------------
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------------TCACTCATTTCATAAAACTGATTTGGCTGCGTATCAAATAAAATCACTCATAAAAAGCTAATTTAATT
TATTTTGACACATCAATTTCACTCAATTCAAAAAATGCTTTTACTAAATTTAAAATAACAATAATTCCTCTCATTTTCGA
AAGCGGATTTCACTCGTTTCAAATAACATAATTTACTCAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-S---------S-S--S---------S-----
-----------------S------S-------S--------------S-----S--------------------------
-------------S------S-S--------------------------S-------------------------S----
----------------------------------------------------------------S----S--S---S-S-
-------------------------------------------------------------------S------------
----------------S---S--------S----------S----S----------------S--S----S---------
---------S----------------S-----S----------------------------------------S------
---------------------S-SSSSSSSS-------------------------------------S-----------
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---------------------S---------SSSS---------------------------------------------
-------------------------------------------------------------SS---------S-------
----------S------S------------------------------------S-------------------------
-------------------------------S-----S-------------------------------S----------
------------------------------------------S-----S--------------------S--S-------
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----------S--SS--------------------------------------------------S--------------
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-----------------------------------------------S--------------------------S-----
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----------------------S---------------------------------------------------------
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---S---------SS--SSSSSSS--------------------------------------------------S-----
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----------------------------
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------------------SSS------------------------------------S------------S------S--
----------------S-------S------------------S-S--S-------SS----------------------
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--------------------------------S---SSS--S-S---S----S-S----S--SSSSSSSSSS--S-----
----SSSSSS---------------S-----------------------S-----------S----------S-----S-
-S------S-S----------S-S-S---S------S-----S---------SS----SS---SSSSS------------
-S--S--------------------S-S---S-S-S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-------------------S----S--------S----------------------S-----------
----------------------------S--------S---S---S----S-----------------S--------SS-
--S-S-----------------------------------
>forward_998
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------------------CCAGTCGACCGAGGAAACAT------------------------------------------
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>reverse_3046
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-----TCAAAGAACTGATCCCGCTCA------------------------------------------------------
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