>input_sequence_69839
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----------------------------------------------------------------ATGCAAGTATCACTGC
ATCAGTGCGCT-----------------------------------AGTGAGT----------------------TGTTC
CAGTGCTTTGATCTTAGTTTTCTTGGAGACCAACCAAGAGCAATGGCGGCTGGTGGCTGTGA---CGTCAATGCGAGCTA
CGATATCAAGCATCTGCTCAAGAGTGACGCCCTGTACAAGTACATCCTGGATACCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCGCGACCTACGCCTCCTCACCGACAAGCACCAAAGGTAGT---AAAAAAATATAAGAGTGTTTAGATAT------
--TATTCTAGTGAT---CTAAACACGTTCATATTTGTTTACGGAGGGAGTACATAATTACG---------------TCGG
TCCAATTAATATTGGT----CGGTGCATCCAGGGGCATCATGCAGTCAACTC-CGGAAGAGGCCCAGCTGCTGCAGCTGC
TGATCAAGATAGCGGGGGCCAGGAACACGATCGAGGTCGGCGTGTTCACGGGCTACTCGCTCCTCGCCACCGCGCTGGCG
CTGCCGAAGGACGCCAAGGTGGTGGCCATAGACGTCAACCGGAAAGACTTCGAGCTCGGCCTGCCCTTCATCCAGAAGGC
CGGCGTGGCGCACAAGGTGGACTTCCGCGAGGGCAAGGCGCTCGACCGCCTCGAGGAGCTCCTCGCCGCCGCGGAAGCCG
ACGCTGCGGCGCAGTATGACTTCGCGTTTGTGGACGCCGACAAGCAGAACTACGGGCGGTACCACGAACAGCTGATGCGG
CTGGTCCGCGTCGGCGGCACCATCGTCTAG--------------------------------------------------
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>chr1B_1_TraesCS1B01G049800
TAATGTGCTCAATTTTGTGGTGCTCAATTCCAGTGACAGAAGGGAACATGACACGT------------------------
----------------ATGTATCAGTTTATCTTGTTTACATCATGTCATCTTGCTTAATGCGTTACTCCGTT-TTTTATG
AACTTAATACTCTAGACACATGCTAGATAGCAGTCGATGTTTGTAGGAATAGTA----TTAGATGCAGGCAGGAGTCGTT
CTACTTCTCTCGGATGTGATGCC--TATATA--TGATCATTGCCTTGAATATCGTCATGATTATTTGTTTTTC-TATCAA
TTGTCCAACAATAATTTCTCTAACCATCATGTGCTATT--T--TCTCGAGAGAAGCCTCTAGTGAAAACTATGGCCCCCG
GTTCTACTTT-TATC--ATATATTAAAA-TC--CAAAAA-TACATTGTTGT-ATTAT--TTATTAATTTA--------TT
TATTTTGATATTTCTGTGCAATCTATCTGTCTATAAACTTACAAT-------------TCAACCGCCAAGGGATTTACAA
--CCCCTTATTCTCGTTGGGT-GCAAAGATTTGTTATCTTGTGTGCAGGTACTGC---TA-CATAGTGTTGCGTGGCTCT
TCTACAGGATTAATAACCTTGG-TTC-TTAACTGAGAAAAATACTTATTTGTACTGTACTGCATCATTCTCTCTTCTTCG
AAAAAATCCCAATGCAGCTCACAAGTAGCAGGTCCTAAATTTTTAACTTCCACTGCAACTTTTTCAAACTAGTTGTGGCG
GGCCTAAACTTTTACCCGTCAATGTAATTTTTTCAAAATAGCTGTGGCGGGCTCCGGACCGCACCCGCAATTAATTTGAG
GCCACATATAAAGCCTTCTCTAAGTAGTGCCTATCGTACATG-CTTTTTCGTATC-GTGTGCAATGCCCCACCTCCC-CC
ATGTTGCACAACATGGCGAGGTGACGGTTCGACCATCCTTGTGAGATAGGATTTTGAACTGTGTGCGATGACCCAATCTG
CACTAGCTAGTGGGGGATCC-------CAGTCCAACAACCACTATAAAACCAAACCTCATTGCAATGCAAGTATCACTGC
ATCAGTGCGCT-----------------------------------AGTGAGT----------------------TGTTC
CAGTGCTTTGATCTTAGTTTTCTTGGAGACCAACCAAGAGCAATGGCGGCTGGTGGCTGTGA---CGTCAATGCGAGCTA
CGATATCAAGCATCTGCTCAAGAGTGACGCCCTGTACAAGTACATCCTGGATACCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCGCGACCTACGCCTCCTCACCGACAAGCACCAAAGGTAGT---AAAAAAATATAAGAGTGTTTAGATAT------
--TATTCTAGTGAT---CTAAACACGTTCATATTTGTTTACGGAGGGAGTACATAATTACG---------------TCGG
TCCAATTAATATTGGT----CGGTGCATCCAGGGGCATCATGCAGTCAACTC-CGGAAGAGGCCCAGCTGCTGCAGCTGC
TGATCAAGATAGCGGGGGCCAGGAACACGATCGAGGTCGGCGTGTTCACGGGCTACTCGCTCCTCGCCACCGCGCTGGCG
CTGCCGAAGGACGCCAAGGTGGTGGCCATAGACGTCAACCGGAAAGACTTCGAGCTCGGCCTGCCCTTCATCCAGAAGGC
CGGCGTGGCGCACAAGGTGGACTTCCGCGAGGGCAAGGCGCTCGACCGCCTCGAGGAGCTCCTCGCCGCCGCGGAAGCCG
ACGCTGCGGCGCAGTATGACTTCGCGTTTGTGGACGCCGACAAGCAGAACTACGGGCGGTACCACGAACAGCTGATGCGG
CTGGTCCGCGTCGGCGGCACCATCGTCTAGGACAACACGCTCTGGGGTGGCACTGTGGCCGGCGTCGCCGTGCCTTCATT
AGACGTCCTGCCCGGCGTTGTTGTGGACGGTGTCCTCGCATGCATCTCCGACTTCCTCAAGGGCTTCAAGGCTGAGCTCG
CTGCTGACCAGCGCATCGATGTCTGCCAGATCGCCGTGGGAGACGGCCTCACCATCTGTCGCCGCCTCGTCTGACTAG--
-TACCATGACCCTGCCGGCACACATGATCTGCTCCATCGCCAACATCCAACCTCCGGACACTAGCCACTCCTACTACTCA
AGATTTGGTTCAATAAGAAGCTGTG-TGTACTATGTGCTTTCCATGCTTTGTGATTTCATCCAA----TAATTAAGGTCC
CAAAATAGACCTTTTGTCCCATAATACAAGACGTTATTACATTCAATATGTGCCATATTAGATGTAATTAATAATGTCTT
ATGTTATGTTATGTTATGGGATGGAGAGAGTATTTGTTTCGTGGACGGTTCAAGATTTTATTTCAATATAAGA-------
-TATGATTATGTCTCTTGGCATGATAATGTTGTTAGTCAAACGTGATATTTGTATATGAGGTAGAC--TCTAGACCAGTA
AGTGATGTGCAGCTGCAACCAGTTTGATAGCATGAAGTTTCCAGGAGAATTAGGGATGTCAAAGGAGGGGGATAGGGAAA
CAACTTATTTTCATGATGTGTCCAACTAGAGGAGGAGAAAAACCTATATCCGCTCCCTGGATGGCCCACCTGGTCATGTC
ACTCATATCGATGAAATTCTAGCGGTTTTGTCTAAATCTTAGTTTCTGTAGTACCGAGGAGAAAGTCAAAGATTTAGAAA
AAATGAGCTCCTCTAGGCCCTTTTCATAGCTAGAATTATTAACTGCCAGAAGTTAGCTAGCTTCCAAATCCTTCGTCTTC
AAATAACTATACACAAGCGATAACGACAGCGTAACTACCAATCACGAAGTACCCAACAAGAGAAATTTTAAGAAGCTACC
CCTTACCC
>chr3B_1
TAATGGGTTCAATCTTGCGGTGCTTAATCCCAGTGACAGAAGGGAACATGACACGTATGTATTGTGCTATCAAGGGTAAA
AAGATGGGGTTTGTTCATACGTGAGTTTATCTTATCTACATCATGTCAT-------------------------------
----------AGTAGATCCATGCTGGATAGCGGTCGATATTTGGAGTAATAGTA----GTAGATGCAGGTAGGAGTTGGT
CTACTTGTTGCGGACATGATGCC--TATATACATGATCATT------GATATCGTCATAATTATTTGCTTTTC-TATCAA
TTGCCAT-CAGTAATTTGTTTACCCACCGTATGCTATT--T--TCAAGATAGAAGCCTCTAGTAAAAACTATGGCCCCAG
GGTCTATCTTTTATC--ATATAGAAAAA--C--CAAAAA-TAGCTTGCAGC-GTTTT--TATTTTATTTA--------TT
TATT-TTCTATTTTTGTTTGATCTATCTATCAAACACCATACAACTTAAT-CTTGCTTGTAACTATCAAGGGATTGACAA
--TCCCTTGTTCGCACTGGGTTGCAAGGGTTTGTTG-TTTGTGTGCAGGTGCTGC---TAACACGGTGTTCCTTGGTTCT
CCTAGTGGATTGATAATCTTGG-TTC-TTAACTGAGGGAAATACTTATCTCTATTGTACTGCATCATCCTCTCCTCTTCG
GGGAAATCCCAACGCAGTTCACAAGTAGCAGG------------------------------------------------
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>chr3D_57
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----------------ATGCATGAGTTTACTTTGTCTACATCATGTCATCCTGGTTAAGGCTTTACTCCGTT-CTTTATG
AACTTAATACTCTAGATGCATGCTGGATAGCGGTCGATGTGTGGAGTAATAGTA----GTATATGCAGGCAGGAGTCGGT
CTACTTGTGTCGGACGTGATGCCTATATACA--TGATCATTGCCTTGGATATCGTCATGATTATTTTCTTTTC-TATCAA
TTGCCCAACAGTAATTT-TTTACCCACCGTATGCTATT--T--TCAAGAGAGAAGCCTCTAGTGAAAACTATGGCCCTCG
GGTCTAATTT-TATC--CTATATTAAAG-TC--ATAAAAATATCTTGCTATAATTTT--ATTTACTTTAT--------TT
TATT-TTGTATTTTAGTGCTATCTATCTATCACT---------ATTTAATCTTTGCAAATAACTACCGAGGGATTGACAA
--CCCCTTGTTTGTGTTGGGT-GCAAGGATTTGTTATTTTGTGTGCATGTACTGC---TAACGAGGTGTTGCGTGGTTCT
CCTACTGGATAGATAACCTTGG-TTC-TTAATTGAGGGTAGTACTTATCTCTAATGTATTGCATCATCCTCTCCTCTTCG
AGGAAATCCCAACGCAGCTCACAAGTAGCAGG------------------------------------------------
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>chr3A_57
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----------------ATGCATGAGTTTACTTTGTCTACATCATGTCATCCTACTTAAGGCTTTACTCCATT-CTTTATG
AACTTAATACTCTAGATGCATGCTGGATAGCGGTCGATGTGTGGAGTAGTAGTA----GTAGATGCAGGCAGGAGTCGGT
CTACTTGTCTCGGACGTGATGCCTATATACA--TGATCATTGCCTTGGATATCGTCATGATTATTTGCTTTTC-TATCAC
TTGCCCAACAATAATTTGTTTACCCACCGTATGCTATT--T--TCAAGAGAGAAGCCTCTAGTGAAAACTATGGCCCTGG
GTCTA--CTTTTATC--CTATATTAAAG-TCCTAAAAA--TACCTTGCTGCAATTTT--ATTTACTTTAT--------TT
TATT-TTGTATTTTTGTGTTCTCTATCTATCACT---------ATTAAATCTTTGCAAATAACTGTCGAGGGAATAACAA
--CCCCTTGTTTGCGTTGGGT-GCAAGGATTTCTTATTTTGTGTGCAGGTACTGC---TAACGAGGAATTGCATGGTTCT
CTTACTGGATTGATAACCTTGG-TTT-GTAACTGAGGAAAATACTTACCTCTATTGTACTACATCATCCTCTCCTCTTCA
AGGAAATCCCAACACAACTCACAAGTAACAGG------------------------------------------------
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>chr4B_57
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----------------ATGTGTGAGTTTACTTTGTCTACATCACGTCATCTTGCTTAAGGCGTTACTCCATT-CTTTATG
AACTTAACACTCTAGATGCATGCTGGATAGCGGTCAATGTGTGGAGTAATAGTA----GTAGATGCAGGCAGGAGTCGGT
CTAGTTGTCTCGGACATGATGCCTATATACA--TTATCATTGCCTTGGATATCATCATGATTATTTGCTTTTC-TATCAA
TTGCCCAACAGTA---------CCCATTGTATGCTATT--T--TCAAGAGAGAAGCCTCTAGTGAAAACTATGGCCCCTG
GGTCTAC-TT-TATC--ATATATTAAAAATCCTAAAAA--TACCTTGCTGCAATTTT--ACTTCATTTAT--------TT
TATT-TTGGATTTTTGTTCAATCTATCTAACTATCT------------AT-CTTGCAAGTAACTGCCGAGGGATTGACAA
--CCCCTTGTTCACGTTGGGT-GCAAGGATTTTTTATTTTCTGTATAGGTACTGC---TAACAAGGTGTAGCGTGATTCT
CCTACTAGATTGATAATCTTGG-TTC-TTAACTGAGGGAAATACTTATCTCTACTGTACTACATCATCCTCTCCTCTTCG
AGGAAATACCAACGCAACTCACAA--------------------------------------------------------
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>chr3D_61
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--------------------ATGAGTTTATCTTGTCTACATCATGTCATCTTGCTTAAGGCGTTTCTCCGTT-CTTTATG
AACTTAATACTCTAAATGCATGCTGGATAGCGGTCGATGTGTGGAGTAATAGTA----GTAGATGCAGGAAGGAATCGGT
CTACTTGTCTCAGATGTGATGCCTATAT--A--TGGTCATTGCCTTGGATATCGCCATGATTATTTGCTTTTTCTATCCA
TTGTCCAACAATAATTTGTCTACCCACCGTATGCTATT--T--TCTCGAGAGAAGCCTCTAGTGAAAACTATGGCCCCCG
GGTCTACTTT-TATC--GTATATTAAAA-TC--CAAAA--TACATTCCTGTAATTTT--TCATTATTTAT--------TT
ATTT-T---ATATTTAGTGGATCTATCTATCCATCACCATACAATTTAAT-CTTGCAATTAACCACCAAGGGATTAACAA
--CCCCTTGTTCACGTTGGGT-GCAAGGATTTGTTATCTTGTGTGCAGGTACTGC---TTACATGGTGTTGTGTGGTTCT
CCTACTGGATT---------------------------------------------------------------------
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>chr1B_64
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-----------------------AGTTTATTTTGCTTACATCATGTCATCTTGCTTAAGGCGTTACTCCGTT-GTTTATG
AAATTAATACTCTAGACGCATGCTAGATAGCAGTCGATGTGTGGAGTAATAGTACGTATTAGATGCAGGCAGGAGTCAGT
CTACTTGTCTCAGACGTGATGCC--TATATA--TAATCATTGCCTTGAATATCATCATGATTATTTGCTTTTC-TATCAA
TTGACCAACAGGAATTTGTCTAACCATCGTATGTTATT--T--TCTCGAGAGAGGCCTCTAGTGAAAACTATGGCCCCCG
GGTCTACTTT-TATC--ATATATTAAAA-TC--TAAAAA-TACATTGCAGCA----------TTATTTAT--------TT
ATTT-TGATATTTCTGTGCGATCTATCTATTTATCACCTTACAATTTAAT-CTTGCAATCAACCGCCAAGGGATTTACAA
--TCCCTTGTTCTCATTGGGT-GCAAAAATTTGTTATCTTGTGTGCAGGTACTGC---TTATATAGTGTTGCGTAGTTCT
CCTACTTGATTGATAACTTTGG-TTC-TTAACTAAAAGAAATACTTATCTATACTGTACTGCATCATCCTCTCCTCTTCG
AGAAAATCCCAATGCAACTCACAAGTAGCAGGGCATAAATTTTGAACTTCTACTGCAACTTTTTCAAACTAGTTGTGGCG
GTCCTAAACTTTTACCCGTCAATGTAATTGTTTCAAAATAGCTGTCACGGGCTCCTGACCGCACCCGCAACTAATTTGAG
GCCACATAT-AAGCCTTCTCTAAGTAGTGCCTATCATACATG-TTTTTT-TGGATTGTGTGCAATGCCCCACCTCCC-CC
CTGTTGCACAACATGGCAAGGTGACGGTTCGACCGTCCTTGTGTGATAGGATTTTGAACTGTGTGCGATGACCCAATCGG
CACTAGCTAGTGGGGTATCCTGTATCCCAGTCCAACAACTACTATAAAACCAAACCCCATTGCAATGCAAGTATCACTAC
ATCAGTGCGCTAATTTGTGTGTGTGAGAGAGAGGGAAG------AGAGTGAGT----------------------CGTTC
CAGTGCTTTGATCTTAGTTTTCTTGGA----AACCAAGAGCAATGGCGGCTGGTGGCTGCAA---CGTCAATGCGAGCTA
GCATATCAAGCATCTGCTCAAGAGTGACGCCCTGTACAAGTATATCCTGGATACCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCGCGACCTGCGCCTCCTCACCCACAAGCACCAGAGGTATAGTAAAAAAAATATAAGAGCGTTTAGATAT------
--TATTTTAGTGATGATCTAAACGCTTTTATATTTGTTTACGGAGAGAGTACATAATTACTGCTAGCGCCGTAGCTTCAG
TCCAATTCATATTGGT----CGGTGCATCCAGGGGCATCATGCAGTCAACTC-CGGAGGAGGCCCAGCTGCTGCAACTGC
TGATCAAGATAGCGGGGGCCAGGAACACGATCGAGGTCGGCGTGTTCACGGGCTACTCGCTCCTCGCCACCGCGCTGGCG
CTGCCAGACGATGCCAAGGTGGTGGCCATCGATGTCAACCGGAAAGACTTCGAGCTCGGCCTGCCCTTCATCCAGAAGGC
CGGCGTGGCGCACAAGGTGGACTTCCGCGAGGGCAAGGCGCTCGACCGCCTCGAGGAGCTCCTCGCCGCCGTGGATAGCG
ACCCTGCGGTGTAGTACGACTTCGCGTTTGTGTACGCCGACAAGCAGAACTACAGGCGGTACCACGAGCAAATGATGCGG
CTGGTCCGCGTCGGCGGCACCATCGTCTACGACTAC--------------------------------------------
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>chr1B_64
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-----------------------AGTTTATCTTGTCTACGTCGTGCCAGTGTTCTTAAGGCATTACTCCGTTCCTTTATG
GACTTAATACACTAGAAACATGTTGTGTAGCGGTCGATGTGTGGAGTAATAGTA----GTGGATGCAGGCAGGAGTCGGT
CTACTAATCTTGGACATGACGCATATATACA--TGATCATTGCCTTGGATATTGTCATGATTATTTGCTTTTC-TATCAA
TTGCCCAACAGTAATTTGTCTATCAAGCATATGCTATT--T--TCTCGAGAGAAGCCTCTAGTGAAACCTATGGCCCCCG
GGTCTATCTA-TCTC--ATATTACTAAAACCCTAAAAA--TA--TTGTTTCCATCTT--TATTTATTTAT--------TT
TATT-TTGTATTTTTGTTTCA---ATCTATC-----ATATACCATTTAAT-CTTGTAATTTACTGCCAAGGGATTGACAA
--CCCCTTGTTTGCGTTGTGT-GCAAGGATTTGTTGTTT-GTGTGTAAGTGCTGC---CAACGAGGTGTTGTGTGATTCT
CCTACTGGTTCGATAACCCTGG-TTTCATAATTGAGGAAAATACTTATCTCTACTGTGCTGCATCATCGCTTCCTCTTCG
GGAAAATACCAACACAAGCTACAAGTAGTAGGT-----------------------------------------------
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>chr1D_64
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-----------------------AGTTTACTTTGTCTACATCATGTCATCATGCTTAAGGTGTTACTCTGTT-CTTTATG
AACTTAATACTCTAGATGCATGCTGGATAGCGGTCGATGTGTGGAGTAATAGTA----GTAAATGCAGGCAGGAGACTGT
CTACTTGTCTCGGATGTGATGTCTATATAGA--TTATCATTCCCTTGGATATCATCATAACTATGCAATTTTA-TATTAA
TTGCCCAACAGTAATTTGTTTACCCACCATATGCTTTTTGT--TCAAGAGAGAAGCCTCTAGTGAAAACTATGGCCCCGG
GGTCTATATT-TATC--ATATAATAAAA-TC--CAAAAA-TACCTTGCTGCAA--TTCATTTATCGTTAT--------TT
CATT-T---GTGTT-------TTTATCTATCTACCATTATCAGACTTGAT-CTTTCCAATAACCGCCGAGGGGATTGACA
ACCCCCTTGATCGCGTTGGGT-GCAAGTATTTGTTCTTTTGTGTGTAGGTGTTGT---TCACGAGGTCTAGCATGGTTCT
CCTATTGGATTGATA-CCTTGG-TTC-CTAACTGAGGGAAATACTTATCTCTACTGTATTGCATCATCCTCTCCTCTTTG
AGGAAATCCCAGCGCAGCTCACAAGTAGCAGG------------------------------------------------
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>chr6B_64
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-----------------------AGTTTATCTTGTCTACATCATGTCATCTTGCTTAAGGCGTTACTCCGTT-CTTTATG
AACTTAATACTCTAGATGCATGCTAGATAGTGGTCGATGTGTGGAGTAATAGTA----GTAGATGCAGGCAGCAGTCGGT
CTACTTCTCTCAGACATGATGCCTATAT--A--TGATCATTGCCTTGGATATAGTCATGATTATTTGCTTTTC-TATCAA
TTGCCCAATAGTAATTTGTCTACCCACCGTATGCTATT--T--TCTCGAGAGAAGCCTCTAGTGAAAACTATGGCCCCCG
GGTCTACTTT-TATC--ATATATTAAAA-TC--CAAAAA-TATGTTGATGCAA--TT--TTTTTCTTTAT--------TT
TATT-TTATATTTA-GTGTGATCTATCTATGTATCAACATACAATTTAAT-CTTCCAATTAACCGACAAGGGATTGCCAA
--CCCCTTGTTCGCGTGGGGT-CGATTGATTTGTTATCTTGTCTGCAGGTACTAC---TTACATAGTGTTGCGTGGTTCT
CCCAATGGATTGATAACCTTCA-TTC-TTAACTGATGGAAATACTTAAGTCTACTGTAATGCATCATCCTCTCCTCTTCG
AGGAAATCCCAACGTAGCTCACAAGTAGCAGG------------------------------------------------
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--------
>chr6B_64
--------------------------------------------------------------------------------
-----------------------AGTTTATCTTGTTTACATCATGTCATCTTGCTTAAGGCACTACTCCATT-TCTTGTG
AACTTAATACACTAGATGCATGATGGATAGCGGTCGATGTGTGGAGTAATAGTA----GTAGATGCATAATTGTTTCGGT
CTACTAATTTTGGACGTGATGCCTATAT--AC-TGATCATTGCCTTGGATATTGTCATAATTATTTGCTTTTT-TATCAA
TTGCCCAACAGTAATTTGTATACCCACTGGATGCTATT--T--TCTCGAGAGAAGCCTCTA-TGAACACTATGACCCCCG
GGTCTATCTTGTATC--ATATAAAAATC-CT--AAAAA--TATTTGGTGCAATTTTT--ACTTTATTCAT--------TT
TAAT-TTATATTTT-GTGTGATATATTTATC-----TCATACAATTCAAT-CTTGCAAATAACCGCCAAGGGATTGAGAA
--CCCCTTGTTCGCGTTGGGT-GCAAGGATTTGTTATCTTGTGTGCAGGTACTGT---TTACATAGTGTTGCTTGGTTCA
CCTACTGGATTGATAACCTTGGTTTC-ATAACTGAGGGAAATACTTATCTCTACTGTACTGCATCATCCCCTCCTCTTAA
GGAAAATCTCAACACAACTCACAAGTAGCAGG------------------------------------------------
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>chr5A_64
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-----------------------AGTTTATCTTGTCCACATCATGTCATTTTGCTTAAAGCATTACTCTGTT-TTCCATG
AACTTAATACACTAGATGCATGCTGGGTAGCGGTTGATGTGTGG-GTAATAGTA----GTAGATGCAGGAAGGAGTTGCT
CTA---ATCTTGGACATGATGCCTATATACA--TGATCATTGACTTGGATATCGTCATCATTATTTGCTTTCC-TGTTAA
TTGCTCAATTGCAATTTGTTTACCCACCGTATGCTATT--T--TCTCGAAAGAAGCCTCTAGTGAAAACTATGGCCCCCG
GGTCTATTTTCTATC--ATATATTAAAA-CC--AAAAA--TACCTTTCTGAAATTTT--ATTTTATTTTA--------TT
TACTTTATATTTTA-GTTAGATCTATTTATCAAAAAATATACAATTTAAT-----------ACCATCGAGGGATTGACAA
--CCTCTCTACACGTTGGGTT-GCAAGTATTTGTTG-TTTGTGTGCATGTGTTGT---TTACATAGTGTTGCTTGGTTCT
CCTACTAGATTGATAACCTTGG-TTTCATAATTTAGGGAAATACTTATCTCTACTATACTGCATCATCGTCTCCTCTTCG
AGGAAATCCCAACGCAGCTCACAAGTAGCGGGT-----------------------------------------------
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>chr5D_65
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------------------------GTTTACTTTGTCTACATCATATCATCTTGCTTAAGGTGTTACTCTGTT-TTTCATG
AACTTAATACCATAGACGCATGTTGGATAGCGGTCGATTGGTGGAGTAATAGTA----GTAGATGCAGGAAGGAGTCGGT
CTACTTGTCTTGGACGTGCTGCCTATAT--ACATGACCATTGCCTTGAATATCGTCATAAATATGCGCTTTTC-TATCAA
TTGCCCAACAGTAATTTGTTCACCCACCGTATGCTATG--TGCTCGAGAGAGAAGCCTCTAGTGAAAACTATGGCCCCGG
GTCTA--CTTTAATTATATATATATAAT-CC--AAAAG--TACCTTGCTGAAATTTT--ATTTCTTTTTA--------TT
TTGT-TTTGCAA-----TTTACTTTACTATCTATCACTATCTGATTTAATCCTTGCAAGTAACGGCCAAGGGGATTGACA
ACCCTCTTATTCGCGTCGGGT-ACAAGTATTTGCTTTTGTGTGTGTAGGTGACGT---TCATGAGGCTTTGTGTGATTCT
CCTACTGGATTGATACCTTGG---TC-CTCACTTAGGGAAATACTTATCTCTACCATACTGCATCTCCTCTTCTCTTCGG
GGAAAATCCCAACGCAGCTCACAAGTAGCAGG------------------------------------------------
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>chr1B_66
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-------------------------TTTATCTTGTTTACATCTTGTCATCTTGCTTAAGGCGTTACTCAGTT-CTTTATG
AACTTAATACTCTAGAGGCATGCTAGATAGCAGTCGATATGTGAAGTAATAGTA----TTAGATGCATGTAGGCGTCGGT
CTACTTGTATCGGACGTGATGCCTATAT--A--TGATCATTGCCTTTAATATCGTCATGATTATTTGCTTTTC-TATCAA
TTGCCCAATAGTAACTTGTCTAACCATCATATGTTTTT--T--TCTTGAGAGAAGCCTCTAGTGGAAACTATGGCCCCCA
GGCCTACTTT-TATC--ATATATTAAAA-TT--CAAAAA-TACATTCCTGCA----------TTATTTATTAATTTATTT
ATTT-TGATATTTCTATGTGATCTATCTATCTATCACCTTACAATTTAAT-CTTGCAATTAACCGCCAAGGGATTTACAA
--CCCCTTGTTCTCGTTGGGT-GCAAAGATTTGTTATCTTGTTTGTGCAGGTATTGCTTA-CATAGTGTTGTGTGGTTAT
CCTACTGGATTGATAATCTTGG-TTC-TTAACTGAAAGATATACTTATATGTACTATACTGCATCATCCTCTTCTCTTTG
ATAAAATCGCAATGCAGCTCACAAGTAGCAGGACCTAAATTTTTAACTTCCACTGCAACTTTTTCAAACTAGCTGTGGCG
GGCGTAAACTTTTACCCGTT----------------AATAGTTGTGGCCGGATCCTGAGCGGATCCACAACTCATTTGAG
GCCACATAT-AAGCCTTCTCTAAGTAGTGCCTATCGTACATG-TTTTTT-TTATC-GTTTGCAATGCCTCACCTCCC-CC
CTGTTGCACAACATGGCAAGGTGACGGTTCGACCATCCTTGTGTGATAGGATTTTGAACTTTGTGCGATGACCCAATCTG
CACTAGCTAGTGGGGGATCCTGTATCCCAGTCGAACAACCACTATAAAACCAAACCCCATTGCAATGCAAGTATCACTAC
AGCAGTGCGCTAATTTGTGTGTGAGAGACAGAGAGTGAGAGAACAGAGTGAGT----------------------CGTTC
CAGTGCTTTGATCTTAGTTTTCTTGGAGACCAACCAAGAGCAATGGCGGCTGGTGGCTGCGACGTCGTCAATGCGAGCTA
CGATATCAAGCATCTGCTCAAGAGTGACGCCTTGTACATGTACATCCTGGATAGCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCACGACCTGCGCCTCCTCACCGACAAGCACCAGAGGTAGT---AAAAAAATATAAGAGCGTTTAGATAT------
--TATTCTAGTGAT---CTAGACGCTTTCATATTTGTTTACACAGGGAGTACATAATTACTGCTAGCGCCGTAGCTTCAG
TCCAATTCATATTGGT----CGGTGCATCCAGGGGCATCATGCAGTCAACTC-CGGAGGGGGCCCAGCGGCTGCAGCTGC
TGATCAAGATAGCGGGGGCCAGGAACACGATCGAGATCGGTGTGTTCACGGGCTACTC----------------------
-TGCCGGAGGATGCCAAGGTGGTGGCCATCGACGTCAACCAAAAAGACTTCGAGCTCGGCCTGCCCTTCATCCAGCATGC
CGGTGTGGTGCACAAGGTGGACTTCTGCAAGGGCAAGGCACTCGACCGCCTCGAGGAGCTCCTCGCCACTGAGGATGGCG
ACCCTGCGGCGCAGTACGACTTTGCGTTTGTGGACGCCGACAAGCAGAACTACAGGCAGTACCACGAGCAGCTGATGCGG
CTGGTCCGCGTCGGCGGCACCATCGTCTACGACAACACACTCTGGGGCGGCACTGTGGCCGGCGTCGCCATGACTTTGTT
AGACATCCTGCCCGGCGTTGTTGTAGACGGTGTCCTCGCATCCATCTCTGACTTTCTCAAGGGCTTCAACGCCGAGCTCG
CCGCTAACCAGCGCGTCGACGTCTGCCAGATCGCCGTGGGAGACGGCCTCACCATC------------------------
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>chr1B_768
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-------------------------------------------------------------CACCCGCCACTAATTTAAG
GCCACATAT-AAGCCTTTTCTAAGTAGTATCTATTGTACACGTTTTTCT-GTATC-ATGTGCAATGCCCCACCTCCCCCC
CTGTTGCACAACATCGCAAGGTGACGATTCGACCCTCC--GTCTGATAGGATTTTGAACTATGTGCGATGACCCAATCTG
CACTAGCTAGTGGGGTATCCTGTATCCCAGTCCAACAACCACTATAAAACCAAACCCCATTGCAATGCAAGTATCACTAC
ATCAGTGCGCT-----------------------------------AATTTGTGTGTGAGAGACAAAGAGAAGAGTGTTC
CAGTGCTTTGATATTTTTTTTCTTCAGGACCAACCAAGAGCAATGGCGGCTGGTGGCTGCGACA---TCAATGCGAGCTA
CGATATCAAGCATCTGCTCAAGAGCGACGCCCTGTACAAGTACATCCTGGATACCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCGCGACCTGCGCCTCCTCACCGACAAGCACCAGAGGTAAT---ACGCTACTATATTATATACTCCCTCTGTCAAA
AATATTTTAGTAAT---CTAAAC---------------TACGGAGGG---------------------------------
---AATTCATATTGGT----CGGTGCATCCAGGGGCATCATGCAGTCAACGCGCGGAGGAGGCCCAACTGCTGCAATTGC
TGATCAAGATAGCGGGCGCCAGGAACACGATCGAGGTCGGCGTGTTCACGGGCTACTCGCTCCTCGCCACCGCGTTGGCG
TTGCCGGAGGATGCCAAGGTGGTGGCCATCGACATCAACC-----GACTTCGAACTCGGCCTGCCCTTCATCCAGAAAGC
CGGCGTGGCGCACAAGGTGGACTTCCGCGAGGGCAGGGCGCTCGACCGCCTCGACGAGCTCCTCGCCGCCG---------
ACCCCGTGGCTCAGTACGACTTCGCCTTTGTGGACGCCGACAAGCAGAACTACGGGCGGTACCATGAGCAGCTGATCCGG
CTGGTCCGCGTCGGTGGCACCATCGTCTACGACAACACGCTCTGGGGCGGCACTGTGGCCGGCATCGCCGTGCCTTCGTT
AGATGTCCTCCCTGGTGTAGTTGTGGACAGTGTCCTCGCGTCCATCGCCGAGTTCCTCAAGGGCTTCAACGCCGAGCTCG
CCGCTGATCCGTGTGTCGACGTCTGCCAGATCGCGGTGGGAGACGGCCTCACCATCTGCCGCCGCCTCGTCTAACTAG--
-TACCATGATCCCGCTGTCTGGCAGGATCTGCTCCATCGCCAGCGTCCAGCCCCTGGACACTAGC------TACTACTCA
-GATTTGATTCAATAAGAAGTTGTAATGTACTATGTGCTTTCCATGCTGTGTGATTTCATTCAA----TA----AGATCT
CGAAATATTCCCTCCGTCGCATAATACAAGACGTTATTGCATCCAGTATGTGCCATATTGGATTTAATCAATAATGTCTA
ATGCTATGT-----TACGGGGTGGGGAGAGTATTTGTTTCGCGGATGGTTCACGATTTTATTTCAATATAAGATGTGTTG
ATATGATTATGTCTCGTGGCATGATATTGTTGTTAGTGAAACGTGATATTTGTATGTGAGGTAGAC--ACTAG-------
AGTGATGTGCAGCTGCAACCCGTT-GACAACATGAGGTTTCCAGGAGAGATAGGGATATTAAAGGAGGGGGATAGGAAAA
CAACTTATTTTCAAGATGTGTCCAGCTAGAGGAGGAGAAAAACCTATATCCGATCCCTGGATAGCCCGGATGGTCATGTC
ACTCAAATCAATGAAATTCTAGGGGTTTTATTTAAATCTTAATTTCTTTAGTACTGAGGAGAAAGTCCAAGATTTAG--A
AAATGAGCTCCTATAGGCCCTTTTCATTGCTAGAATTATTAGCTGTGAGAAGTTAGTTAGCTTCCAAATCCTTCGTCTTC
AAATAACTATACACAAGCGGCAATGACAGTGTAACTACCAATCACAAAGTACCTAACAAGAGAAATTTTAAGATGCTACC
TCTTACCC
>chr1D_1041
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-AGTGCTTTGATCTTTGCATTCTCCGAGACCAACCAACAGCAATGGCGGCGAGTGGCAGCGA---CGTCAATGCGAGCTA
CAACATCAAGCATCTGCTCAAGAGCGACGCCCTGTACAAGTACATCCTGGATACCACGGTGTTCCCCCGAGAGCCGGAGT
GCATGCGCGACCTGCGCCTCTTCACCGACAATCACCAGAGGTAAT---ACACACGTACCATATATA--------------
-------------------------------------------------TACAGAATTACTGCTAGGGTCGTCACCTCAG
TCAAATTCATATTGGCCGGCCGGTGCTTCCAGTGGCATCATGCAGTCAACGC-CGGAGGAGGCCCAGCTGCTGCAGCTGC
TGATCAAGATAGCGGGGGCCAGGAACACGATCGAGGTCGGCGTGTTCACGGGCTACTCGCTCCTCGCCACCGCACTAGTG
CTGCCGGAGGACGGCAAGGTGGTGGCCATCGACGTCAACCGGAAAGACTTCGAGCTCGGCCTCCCCTTCATCCAGAAGGC
CGGCGTGGCGCACAAGGTGGACTTCCGCGAGGGCAAGGCGCTCGACCACCTCAACGAGCTCCTCGCCGCCG---------
ACCCCTTGGCTCAGTACGACTTCGCGTTTGTGGATGCCGACAAGCAGAACTACGGGCGGTACCATGAGCAGCTGATGCGG
CTGGTCCGCGTCGGCGGCACCATCGTCTACGACAACACGCTCTGGGGTGGCACAGTGGCTGGCGTCGCCGTGCCTTCGTT
AGACGTCCTGCCCAGCGTTGTTGTGGACGGTGTCGTCGCGTCCATCGCCGAGTTCCTCAAGGGCTTCAACGCCGAGCTCG
CCGCTGACCCGCGCGTCGACGTCTGCCAGATCGCGGTGGGAGACGGCCTCACCATCTGCCGCCGCCTCGTCTGAATAGTA
CTACCATGATCCCGCCGGCTGGCAGGATCTGCTGCGTCGCCT-CGTCCAACCCCTGGACACTAGC------TTCTACTCA
AGATTTGATTCGATAAGAACTTGTGATGTACTATGTGCTTTCCATGCTGTGTGCTTTCATTCAA----TA----AGGTCC
CAAAATACCCCCTCTGTCTCATAATATTAGACGTTATTACATCCAGTATGTGCCATATTGGATGTAATTATTAATGTCTT
ATGTTATGTTA--TTATGGGATGGAGAGAGTATTTGTTTCACGGATGGTTCAAGATTTTATTTCAATATAAGATGTGTTG
ATATGATTATGTCTCCTGGCATGATATTGTTGTTAGTCAAACGTGATATTTATATGTGAGGTAGACACACTAGACCGGTA
AGTGATGTGCAGCTGCAACCCGTT-GACAACATGAGGTTTCCAGGAGAGATAGGGATCTCAAAGGA-GGGGATAGGAAAA
CAACTTATTTTCATGATGTGTCCAGCTAGAGGAGGAGAAAGACCTATATCCGCTCCCTATATGGCCCCAATGGTCATGTC
ACTCAAATCAATGAAATTCTAGGGGTTCTGTTTAAATCTTAATTTCCTAAGTACCAAGGAGAAAGTCCAAGATTTAG--A
AAATGAGCTCCTCTAGGCCCTTTTCATTGCTAGAATTATTAGCTGCCAGAAGTTAGTTACCTTCCAAACCATTCGTCCTC
AAATAACTATACACAACCGACAACGACGGCGTAACTACCAATCACGAAATACCCAACAAGAGAAATTTTAAGATGCTAGT
TCTTACCC
>chr1B_1756
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---------------------------------AACACGCTCTGGGGCGGCACTGTGGCCGGCGTCGCCGTGCCTTCGTT
AGACGTTCTCCCCGGCGTCGTTGTGGACGGTGTCCTCGCGTCCATCTCTGACTTCCTCAAGGGCTTCAACGCCGAGCTCG
CCGCTGACCCGCGCGTCGACGTCTGCCAGATCGTCGTGGGAGACGGCCTCACCATCTGCCGCCGCATCGTCTGACTAG--
-CACCATGATCCCGCCGGCTCGCAGGATCTGCTCCGTCGCCTGCGTCCAGCCCCTGGACACTAGC------TACTACTCA
AGATTTAATTCAATAAGAAGTTGTGATGTACTATGTGCTTTCCATGTTGTGTGATTTCATTCAA----TA----AGGTCC
CAAAATACTCCCTACGTCCCGTAATGCAACACGTTATTACATCCAATATGTGACATATTGGATGTAATTAATAACGTCTT
ATGTTATGA-----TATGGGATGGAGAGAGTATTTGTTTCGCGGATGGTTCAAGC-----TTTCAATATAAGATGTGTGG
ATATGATTATGTCTCGTGGCATGATATTGTTGTTAGTCAAATGTGATATGTATGTGTGAGGTAG--ACACTAGACTGGTA
AGTGATGCGCAGCTGCAACCCGTT-GACAACATGACGTTTCGAGGAAAGATAGAAAC----------------------A
CAACTTATTTTCGTGATGTGTCCAGCTAGAGGAGGAGAAAAACAAATATCGGCTCCCTCGGTGCTCCCAATGGCAC-GTC
ACTAAAATAAATGACATTCTAGGGGTTTAGTTTAAAT-------------------------------------------
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>chr1B_1936
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-----------------------------------------------------ATCTGCCACCGCCTCGTCTGACTAG--
-TACCATGACCCTGCCGGTTCGCAGGATCTGCTCCATCGCTGGCGTCCAGCCCCTGGACACTAGCCACTCCTACTACTCA
AGATTTGGTTCAATAAGAAGTTGTGATGTACTATGTGCTTTCCATGCTTTGTGATTTCATCCAGTAATTA----AGCTCC
CAAAATACTCCTTTTGTCCCATAATACAGGATGGCATTACATTCAATATGTGCCATATTAGATGTAATTAATAATATCTT
ATGCTATGT-----TATGTGCTGGAGGGAGTATTTGTTTCATGGATGGTTCAAGATTTTATTTCAATATAAGATAC----
----GATTATGTCTCTTGGCATGATATTGTTGTTAGTCAAACGTGATATTTGTATGTGAGGTAG--ACTCTAGACCGGTA
AGTGATGTGCAGCTGCCACGAGTT-GACAGCATGAAGTTTCCAGGAGAGATAGGAATGTCAAAGGATGGGGATAGGGAAA
CAACTTATTTTCATGATGTGTCCAGCTAGAGGAG---AAAAACCTATATCCGCTACCTGGATGGCCCACCTGGTGATGTC
ACTCAAATCTATGAAATTCTAGCGGTTTTGTCTAAATCTTAATTTCTTTAGTACCGGGGAGAAAGTCAAAGATTTAG--A
AAATGAGCTTTTCTAGGCCCTTTTCATTGCTAGAATTGTTAGCTGCCAGAAGTTAGCTAGCTTCCAAATCCTTCGTCTTC
AAATAACTATACACAAGCGATAACGACAGCGTAACTACCAATCACGAATTTCCCAACAAGAGAAATTTTAAGATGCTACC
TCTTACCC
>SNPs
-----S-S-----S---S------S---S---------------------------------------------------
----------------------S-----------------------------------S---------------------
-------------------------------------------S--S-------------------------------S-
-------------------------------------------------------------------S------------
-----------------S------------S-------------------------------------------------
-------------------------------------------------------S------------------------
----------------------------S---------------------------------------------------
----------------------------------------------------------------------------S---
S----S-----S------------------------------------S------------------S------------
-S------------------------------------------------------------------------------
-----------------------------S-------------------------S--------------S---------
---------S---------------------------------S-----S------------------------------
S----------------S-------------------------S------------------------------------
--------------------------------------------------------S---------------------S-
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------S-----------------------S-------------------------S----------------
-----------------------S-S----------------------------------S-----------------S-
-------S-------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------S----------------------S--------------------------------------------------
-----------------------------------------------------------------------S---S-S--
--S-------------S--------------------------------------------------S------------
-----------------------------S-----------------------------------------------S--
-----------------------------------------S---------------------------S--S-------
-S------------S----S--------------------------------------S---------------------
-------------------S-S--S-----------------S-S-------S-S-------------------------
--------------------S-------------------------------------------------SSSS------
-------SS-----------------------------------------------------------------------
-----------SS--------------------------------S----------------------------------
--------------------------S----------------------------S--------------------S---
------------------------S--S--------------------SS------------------------------
------------------------S-------------------------------------------------------
-----S---S-------------------------------S-----S-----------------------------SS-
---------------------------S-------------S--------------------------------------
-------------------------------------------------------------------------S------
S-------
>forward_1004
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------------------------CGGTTCGACCATCCTTGTGA------------------------------------
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>reverse_2182
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---------------------ACATGATCTGCTCCATCGCC---------------------------------------
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--------
