>input_sequence_69831
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---------------------------------------------ATGTCTCGCCGCTACGACAGCCGCACCACGATCTT
CTCGCCGGAGGGCCGGCTGTACCAGGTGGAGTACGCGATGGAGGCGATCGGGAACGCCGGGTCGGCGCTCGGGATCCTGG
CGGCGGACGGCGTCGTCCTCGTCGGCGAGAAGAAGGTCACCTCCAAGCTGCTCCAGTCCTCCCGATCCGCGGAGAAGATG
TACAAGATCGACTCCCACCTCGCCTGCGCCGTCGCCGGGATCATGTCCGACGCCAACATCCTCATCAACACCGCCCGCCT
CCACGCCCAGCGCTACGCGCTCTCCTACCAGGAGCCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGC
AGGGCTACACCCAGTTCGGGGGCCTCCGCCCCTTCGGCGTCTCCTTCCTCTTCGCGGGGTGGGACAAGAACCACGGCTTC
CAGCTCTACATGAGCGACCCCTCGGGCAACTACGGCGGCTGGAAGGCCGCCGCCGTCGGGGCCAACAGCCAGGCCGCCCA
GTCCATGCTCAAGCAGGACTACAAGGACGGCATGACCCGCGAGGAGGCCGTCGCCCTTGCCCTCAAGGTCCTCAGCAAGA
CCATGGATTCCACTAGTTTGACTGCCGATAAGCTGGAGCTGGCCGAGGTCTTCGTGCAGCCCGGCACTGGGGAGGTGCAG
TACCAGGTGTGCTCTCCTGATGCCATGGGGAAGCTGCTTGCCAAGGCTGGGCTTACGCAGCCTGCGCCTGAGGCCTGA--
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>chr7D_1_TraesCS7D01G129900
TAAACATTGATGAAACACACGGTTGTACCTATTCGGCCTCCTCTCATGACTGCCCTAATTAGGATTTCTCCACCCCCCCG
CCGGTCTGCGAGTCTTCGGGGCCTTACGGCCATGGAGGCGCGATTGAGCTCAATCCTTGCTGACGGGAGGGTTCCTGTTT
TGTTTTTAGGTTTTTTTTTATGTCGACTAGGGTTTGTGTCTTGCTCAGAAAGGAGAGGCGGAGGTGGCTCCCTGAATATG
GAATAAGGTCCTCCCCCTAGCCCCATCCCGACGGTCCGTCTAGTGTCATCGAAGGGCCTGTGGAGTTGTGTCTCTGGCGG
ATCTCGTGGGATTCGTTCGGTGTTGGTCTTCATCAGATCTCCGTGGATCCAGTCTTCATTCGTGTCTACAGGTTGGATTC
TTCAGGTCCAAGCTTATCTTCATCGACATCGATCGATTGCTGTTCTGGTGCATCAGTTCTGCAGGGTCTTAGCACAACAA
CTTCATGACTGTCTAGTATAGTAGATTTTGCCTGGTTCCCATAAGGGACGGGCGATGATGGTGGCACGCCTTTTGGCTCG
CTACTTGTAGTCGTCGCCGTGTAATCTACTGACCTAACTGTATTTTTTTTATTTCTGATGTTCCTGCCATGACATAACAA
AGACAGGAAGGATTCTCGCCAAAAGAATAAAAATAAACATTGATTATTTATTATTACACAATTAGCTCGGAATTCTGGAA
TTTGAGATGAATTTGCATAAAACCACTTCTCAACACTTCCCTCACA----TCCTTGTCCAATTTTGCTTCCTGCAGATTT
CCTTTTCGTTTCCACCCCTAAACTTGAAACAAAACCCAAACCACAACCCTCCTCTTTACTTGCCTTACAAGTAGATCCCT
CGTTAACCTTCCCCCCC-GACTCTGCTTCCTCCCTCCCCACTTCCCCCAAATCCCCCACCCGAACCCTCGGAATCCCTCT
CTCGCCGCCGCTGACCCCTCCGCCGATCTCCCCGCCGCCGACGAGATGTCTCGCCGCTACGACAGCCGCACCACGATCTT
CTCGCCGGAGGGCCGGCTGTACCAGGTGGAGTACGCGATGGAGGCGATCGGGAACGCCGGGTCGGCGCTCGGGATCCTGG
CGGCGGACGGCGTCGTCCTCGTCGGCGAGAAGAAGGTCACCTCCAAGCTGCTCCAGTCCTCCCGATCCGCGGAGAAGATG
TACAAGATCGACTCCCACCTCGCCTGCGCCGTCGCCGGGATCATGTCCGACGCCAACATCCTCATCAACACCGCCCGCCT
CCACGCCCAGCGCTACGCGCTCTCCTACCAGGAGCCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGC
AGGGCTACACCCAGTTCGGGGGCCTCCGCCCCTTCGGCGTCTCCTTCCTCTTCGCGGGGTGGGACAAGAACCACGGCTTC
CAGCTCTACATGAGCGACCCCTCGGGCAACTACGGCGGCTGGAAGGCCGCCGCCGTCGGGGCCAACAGCCAGGCCGCCCA
GTCCATGCTCAAGCAGGACTACAAGGACGGCATGACCCGCGAGGAGGCCGTCGCCCTTGCCCTCAAGGTCCTCAGCAAGA
CCATGGATTCCACTAGTTTGACTGCCGATAAGCTGGAGCTGGCCGAGGTCTTCGTGCAGCCCGGCACTGGGGAGGTGCAG
TACCAGGTGTGCTCTCCTGATGCCATGGGGAAGCTGCTTGCCAAGGCTGGGCTTACGCAGCCTGCGCCTGAGGCCTGATG
TGCTGGTTTGCTGTGGCTTGCGATGCCTACTACTCTTAGACCGCTTAATCAGTTATGTTTCTGTTGTTTTAAGCCAAACT
ATTTGACAATTATGCATTTTAATTTTATGTCGAACATGCT-TCATATTTTCTTTATCTGATGGATTGTCGTATGTTAGGT
GAAAATTGTGAT-CCTTGTGCCCCATGCTTGATTGTTATTGTGACTA--------------ATGCGCTTATAGAAAACTG
CAGCGAAACC---------------------TATGTGTTTGACCA-TGTTCTCATCAAGTGTGTTTAGTGAACAATCCC-
AATTGTAAGGAGGTTCTGGTGCTTGGGGCCTGTGTTTATAAAGTTTAGCGCCTTCAATAGATTCAATA--CCTATGCACC
ATCTAGTTTGCCCCATGGAGAAGTTAGTAATTATGTATGA-TGATTGCATAAAACATCATATAAGATTGTAGGTTGGAAT
CTTGGTGGTCACATGTTTTCTTGTTGCTCTATG-----TCTAGGTTGTCATAGACAACAACAATGATCATGTTAGAGCAA
GACAATGGGAATAGTAGAAGCATTGTATGCCACCAACTGTT--TGCCGCCTTTACTCTGTTCCTTGAAGA-ATTAGCTAT
TTA--CAATAAGACATAATCTTTA-GCGATTTTGATG-ACATCTCCACAATGACAATATCTTGCCAATTTTTCTGG-TAG
CCCCCCCCATGGGCCCATTGCACGTTTATGCTGTACGTACCTTGCCTT-GGGTTTTCTTGATTGCTCTT--------GTG
TACTGATTAGTTAGTTGTGTTCTGTTGAACAACTTGGGAGCATAACATGCTGCTATGCAGTCTGTCAGTTCTAGATAAAT
TTCATACAA------------ATATGGGTGCCGAATTCTGATCAATTCCGCATTATTCAAGCATTTTAGGGGATTTGATG
CAAGCAAATAACACTAGATATAGTCTGATTTTGAAAATCTGTATGCATGTTGTAGCGC-TTGTATTCATCTGGTCAAAAC
GGTAATGAACTGTATTT-----CACTTGG-TAAGGAACTCA
>chr7B_696
ACAGCATTTAGCTCGAAT--------------------------------------------------------------
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------------------------------------------------------------------------TTTTAGAA
TTAGAGATGATTTTGCATCAAACCACTTTAACATATTTGAGCCTCTCGCCTCTTTGTCCGATTTTGCTTCCTGCAGACTT
CCTTTTCGTTTCCACCCTCAAACTTAAAACAAAACCCAAACCACAGCCCTCCTCTTTACTTGCCTTACAAGTAGATCCCT
CGTTAACCTT-CCCCCC-GACTCTGCTTCCTCCCTCCTCACTTCCCCCAAATCCCCCACCCGAACCCTCGGAATCCCTCC
CTCGCCGCCGCCGA------------TCTCCCCGCCGCCG---AGATGTCTCGCCGCTACGACAGCCGCACCACGATCTT
CTCGCCGGAGGGCCGGCTGTACCAGGTGGAGTACGCGATGGAGGCGATCGGGAACGCCGGGTCGGCGCTCGGGATCCTGG
CGGCCGACGGCGTCGTCCTCGTCGGCGAGAAGAAGGTCACCTCCAAGCTGCTCCAGTCCTCCCGATCCGCCGAGAAGATG
TACAAGATCGACTCCCACCTCGCCTGCGCCGTCGCCGGGATCATGTCCGACGCCAACATCCTCATCAACACCGCCCGCCT
CCACGCCCAGCGCTACGCGCTCTCCTACCAGGAGCCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGC
AGGGCTACACCCAGTTCGGGGGCCTCCGCCCCTTCGGCGTCTCCTTCCTCTTCGCCGGGTGGGACAAGAACCACGGCTTC
CAGCTCTACATGAGCGACCCCTCCGGCAACTACGGCGGCTGGAAGGCCGCCGCCGTCGGGGCCAACAGCCAGGCCGCCCA
GTCCATGCTCAAGCAGGACTACAAGGACGGCATGACCCGCGAGGAGGCCGTCGCCCTTGCCCTCAAGGTCCTCAGCAAGA
CCATGGATTCCACTAGTTTGACTGCGGATAAGCTGGAGCTGGCCGAGGTCTTCGTGCAGCCCAGCACTGGGGAGGTGCAG
TACCAGGTGTGCTCCCCTGACGCCATGGGGAAGCTGCTTGCCAAGGCTGGGCTCACGCAGCCCGCGCCTGAGGCCTGATG
TGCTGGTTTGCTGTGGCTTGTGATGCCTACTGCTCTTAGACCGCTTAATCAGTTATGTTTCTGTTGTTTTAAGCCAGACT
ATTTGACAATTATGCATTTTAATTTTATGTTGAACATGCT-TGATATTTTCTTTATCTGATGGATTGCCTTATGTTAGGT
GAAAATTGTGAT-CCTTGTG-CCCATGCTTGATTGTTATTGTGACTAGGGGATATGGAAGAATGCGCTTATAGAAAACTG
CAGTGAAACC---------------------TATGTGTTTGACCA-TGTTCTCATCAAGTGTGTCCAGTAAGCAAGCCCA
AATTGTAAGGAGGTTCTGGTGCTTGGG-CCTGTGTTTATAAAGTTTAGCGCCTTGGATAGGTTCAATACTCCTATGCACC
ATCTAGTTTGCCCCATGGAGAAGTTGGTAATTATGT---A-TGATTGCATAAAACATCATATAAGATTGTAGGTTGGAAT
CTTGGTGGTCACATGTTTTCTTGTTGCTCTATG-----TCTAGGTTATCATAGCCAACAACAATGATCATGTTAGAGCAA
GACAATGGAAATAGTAGAAGCATTGTATGCTACCAACTGTTTATGCCGCCTTTACTTTGTTCCTTGAAGA-ATTAGCTAC
TTATACAATAAGACATGATCTTTAGCCGATTTTGATG-ACTTCTCCACGATGACCATATCTTGCTAAGTTTTTTGGGTAG
CT--CCCCATGGCCCCATTGCACGTTTATCCTGTACTTACCTTGCACCGGGTTTTTCTTGATTGCTCTT--------GTG
TACTGATTAGTTAGTTGTGTTCTGTTGAACAACTTGGGAGCATAACATGCTGCTATGCAGTCTGTCAGTTCTAGAAAATT
TTCATACATACCTGAGTATATATATGGGTGCTGAATTCTGACCAGTTCCGCATTATTCAAGCATTTTAGGGGATTTGATG
CAAGCAAATAACTC-AGATATAGTCCGATTTTGAAAATCTGTATGCATGTTGTAGCGC-TTGTATTCATCTGGTCAAAAC
GGTAATGAACTGTATTT-----TACTTGG-TAAGGAACTCA
>chr7A_779
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--------------------------------------------------------------TTTGCTTCCTGCAGATCT
CCTTTTCGTTTCCACCCCTAAACTTACAACAAAACCCAAACCACAACCCTCCTCTTTACTTGCCTTACAAGTAGATCCCT
CGTTAACCTT-CCCCCCCGACTCTGCTT----CCTCCTCACTTCCCCCAAATCCCCCACCCGAACCCTCGGAATCCCTCC
CTCGCCGCCGCCGACCCCTCCGCCGATCTCCCCGCCGCCG---AGATGTCTCGCCGCTACGACAGCCGCACCACGATCTT
CTCGCCGGAGGGCCGGCTGTACCAGGTGGAGTACGCGATGGAGGCGATCGGGAACGCCGGGTCGGCGCTCGGGATCCTGG
CGGCCGACGGCGTCGTCCTCGTCGGCGAGAAGAAGGTTACCTCCAAGCTGCTCCAGTCCTCCCGATCCGCGGAGAAGATG
TACAAGATCGACTCCCACCTCGCCTGCGCCGTCGCCGGGATCATGTCCGACGCCAACATCCTCATCAACACCGCCCGCCT
CCACGCCCAGCGCTACGCGCTCTCCTACCAGGAGCCCATCCCCGTCGAGCAGCTCGTCCAGTCCCTCTGCGACACCAAGC
AGGGCTACACCCAGTTCGGGGGCCTCCGCCCCTTCGGCGTCTCCTTCCTCTTCGCGGGCTGGGACAAGAACCACGGCTTC
CAGCTCTACATGAGCGACCCCTCCGGCAACTACGGCGGCTGGAAGGCCGCCGCCGTCGGGGCCAACAGCCAGGCCGCCCA
GTCCATGCTCAAGCAGGACTACAAGGACGGCATGACCCGCGAGGAGGCCGTCGCCCTTGCCCTCAAGGTCCTCAGCAAGA
CCATGGATTCCACTAGTTTGACTGCCGATAAGCTGGAGCTGGCCGAGGTCTTCGTGCAGCCCGGCACTGGGGAGGTGCAG
TACCAGGTGTGCTCTCCTGACGCCATGGGGAAGCTGCTTGCCAAGGCTGGGCTCACGCAGCCCGCGCCTGAGGCCTGATG
TGCTGGTTTGCTGTGGCCTGTGATGCCTACTACTCTTAGACTGCTTAATCAGTTATGCTTCTGTTGTTTTAAGCCAAACT
ATTTGACAATTATGCATTTTAATTTTATGTTGAACATGCT-TGGTATTTTCTTTATCTGATGGATTGTCTTGTGCTAGGC
GAAAATTGTGAT-CCTTGTGTCCCATGCTTGATTGTTATTGTGACCAGGGGATATGGAAGAATGCGCTTATAGAAAACTG
CAGTGAAACC---------------------TATGTGTTTGACCA-TGTTCTCATCAAGTTTGTTTAGTGAACAATCCC-
AATTGTAAGGAGGTTCTGGTGCTTGGGGCCTGTGTTTATAAAGTTCAGCGCCTTCAATAGATTCAATA--CCTATGCACC
ATCTAGTTTGCCCCATGGAGAAGTTAGTAATTATGTATGA-TGATTGCATAAAACATCATATAATATTGTAGGTTGGAAT
CTTGGTGGTCAAATGTTTTCTTGTTGCTCTATG-----TCTAGGTTGTCATAGACAACAACAATGATCATGTTAGAGCAA
GACAATGGAAATAGTAGAAGCATTGTATGCTACCAACTGTTTACA--GCCTGTACTCTGTTCCTTGAAGA-ATTAGCTAC
TTA--CAATAAGACATAATCTTTGGGCGATTTTGATG-ACTTCTCCATGATGACAATATCTTGCCAATTTTTCTGG-TAG
CC--CCCCATGGGCCCATTGCACGTTTATCCTGTATGTACCTTGCCTT-GGATTTTCTGGATTGCTCTTGTGTACTGGTG
TACTGATTAGTTAGTTGTGTTCTGTTGAACAACATGGGAGCATAACATGCTGCTATGCAGTCTGTCAGATCTAGATAAAT
TTCATACAA------------ATATGGGTGCTGAATTCTGATCAGTTCCGCATTATTCAAGCATTTTAGGGGATTTGATG
CAAGCAAGTAACACTAGATATAGTCTGATTTTGAAAATCTGTATGCACGTTATAGCGC-TTGTATTCATCTGGTCAAAAC
GGTAATGAACTGTATTT-----CACTTGT-TAAGGAACTCA
>chr7D_1788
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--------------------------------CTCTTAGATGGTTTAATCAGTTATGTTTATGTTGTGG-AAACCAAACT
ATTTGACAATTATGCATTTTAATTTTATGTCGATTGGTTAATGATATTTTCTTTCTCTAATGAGTTGTCTTATGATTGGT
GAAAATTATAATTTTTTGTGTCCCATGCTTGTTTGTTATTGTGACTAGGGAATATG-AATAATGCGCTTATAAAATCTAC
TCCGTCCATCCCAC--------------------------------TGGTGTAATCAAGTGTGTTTAGTGAACCAGCCCA
AATTGTAAGGAGGTTCTGGTGGTTGGGACGTGTGG-TATAAAGTTTAGAGCCTTGGATAGATTCAATACTTCTATGCACC
ATCTAGTTTACCTCATGGAGAAGCTGGTAATTATGTATGACTGGATAAATAAAACGTCGCATAAAATTGCAGGCTGGAAT
CTTGGTGGTCACATGTTTTATTGTTGCTCTATGGTAATTCTAGGTAATCATAGACAACAACAATGATC-----------A
GACAATGGAAATAGTAGAAGCATTGTATGCTACCAACATTTTATGCCACCTTCACTCTGTTCCTTGAAAA-ATTAGTTAC
TTA--CAGTAAGACATGATCTTTGGATGATTTGGATGAACTTTTCTGCGATGACCATATCTTGCCAAGTTATTTTGGTAG
CC--CCCCATGGCCCAATCACATGTTTATCCTGTACGTACCTTGCCTT-GGGG-TTCTTGATTGCTCTTTTGTACCGGTT
TACTGATTAGTTAGTTGTGTTCCGTTGAATAACTTGGGAGCATAACATGCTGCTATGCGGTCTACTAGTTCTAGCATTTT
GTCATACATACCTGAGTATATACATGGATGCCGAATTCTGATTAGTTCAACATTATTCAAGCATTCAA-GGGATTTGGTG
-AAGCAAATAACTCTAGATATAGTATGATTTTGAAAATCCATTTAGTGCTTGCACATAGTGGTGTTCATCTAGACAAAGT
GGAAATGAACTGTATTTGTGGTCACTTGG-TAAGGAACTCA
>chr7A_1788
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--------------------------------CTCTTAGATGGTTTAATCAGTTATGCTTATGTTGTGG-AAACCAAACT
ATTTGACAATTATGCATTTTAATTTTATGTCGACTGGTTAATGATATTTTCTGTCTCTAATGAGCTGTCTTATGATTGGT
GAAAATTATAAC-TTTTGTGTCCCATTC---TTTGTTATTGTGACTAGGGAATATG-AATAATGCGCTTATAAAATCTAC
TCCGTCCATCCCAAAGTAAGTGTCGAGGGAGTATGTGTTTGACCACTGTTGTCATCAAGTGTGTTTAGTGAACCAGCCCA
AATTGTAAGGAGGTTCTGGTGGTTGGGACGTGTGG-TATAAAGTTTAGAGCCTTGGATAGATTCAATACTTCTATGCACC
ATCTAGTTTACCCCATGGAGAAGCTGGTAATTATGTATGATTGCATAAATAAAACATCGCATAAAATTGTAGGCTGGAAT
CTTGGTGGTCACATGTTTTATTGTTGCTCTATGGTAATTCTAGGTAATGATAGACAACAACAATGATC-----------A
GACAATGGAAATATTAGAAGCATTGTATGCTACCAACCTTTTATTCCACCTTCACTTTGTTCCTTAAAAATATTAGCTAC
TTA--CAGTAAGACATGATCTTTGGATGATTTGGATGAACTTCTCTACGATGACCATATCTTGCCAAGTTATTTTGGTAG
CC--CCCCATGGCCCAATCACATGTTTATCCTATACGTACCTTGCCTT-GGGG-TTCTTGATTGCTCTTTTGTACCGGTT
TACTGATTAGTTAGTTGTGTTCCGTTGAATAACTTGGGAGCATAACATGCTGCTATGCGGTCTACCAGTTCTAGCATTTT
GTCATACATACCTGAGTATATACATGGATGCCGAATTCTGATCAGTTCAACATTATTCAAGCATTTCAGGGGATTTGATG
-AAGCAAATAACTCTAGATATAGTATGATTTTGAAAATCCATTTAGTGCTTGTACATAGTTGTGTTCATCTAGACAAAAT
GGAAATGGACTGTATTTGTGGTCACTTGGTTAAGGAACTCA
>SNPs
SS-S----S-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-S---
--S-------S-------S---------SSSS-S-S--SSSS-S-S------S------S--------------------
-------------------------S------------------------------------------------------
----------S--------------------------S-----------------------------------------S
-----------S----------------------------SSS-------------------------------------
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----S---------------------------------------------------------------------------
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-----------------------S--------------------------------------------------------
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--------------------S--------------------------------S--------S-----------------
--------------------S-----------------------------------------------------------
------------------------------------------S--------------------------S----------
--------------------S-----------------------------------------------------------
---S----------------------------------------------------------------------------
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--------S---------------------S------------------------------------------------S
----------------------------------------S-------S-------------------------------
--SS-------------------------S--------------------------------------------------
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--------------------------------------------S-----------------------------------
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>forward_291
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-------------------------------CGGTCCGTCTAGTGTCATCG-----------------------------
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>reverse_1781
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--------------------CGATGCCTACTACTCTTAGACCG-------------------------------------
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