>input_sequence_69815
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-------------------------------------------------------AAATCCGCTGTCGGAAGCC-----T
CCACTCCACTCCACTCCACTCTCTAGCAGCTCCTCAACATTCAACAAGCCACGAGCAGAGCCACCGCGGCCAGCGAGCGC
------GAGTGAGGCGCCGGCGTTCGATCGA----CGAGATGAGCGTGGTGGTCCTGGACGGGTCGACGGTGCGGTCCTT
CGTGGCCGACGAGGCGGCCTTCGCGCGCAGCGTGGATGCGCGCTTCGCCGCGCTCGACGCCAACGGCGACGGCGTGCTCT
CCCGCGCCGAGCTCCGCCGCGCGCTCGAGTCCTTCCGCCTCCTCGACGGCGCGGGCTTCGGCTCCGCCGAGCCGGCCCCG
CTCCCGGGCGAGGTCGCGGCCCTCTACGACGCCGTGTTCGAGCAGTTCGACGCTGACCACAGCGGCGCCGTGGACCGCGC
CGAGTTCCGCGGCGAGATGCGCCGCATCATGCTCGCCGTCGCCGACGGCCTCGGCTGCCAGCCGCTCCAGGTCGCCGTGG
ACGACAAGGGCGGCAGCTTCCTGCTCGAGGCCGCGGAGCACGAGGCCGCCATGATCGCCGCCAGGGTCCAGGAAGAACGC
GACAAGACCGCGGCCGAGGAGGCAGCCGACGGCAAGTGATGACGGCGCCGACGGCTCCACGGTGTGTA--CGTGTCAAGG
TGGTGACGTGGAGTGGCGCGTGGCGTGTACGTGTGAGACGAGTAGTGTGCCGCGTGCGTTTGTCCTGACTCC--TTAGTG
TAATGTACCGAGTATATTATGAAAAAA-----------------------------------------------------
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>chr5D_1_TraesCS5D01G464500
ACGGGAGCCGCGGTGCCACGTGAGCCGCGGCAGGAGGAGGATGCGATGGCTAATGCGCCGCGGGCAAAGTTGGCACTGGC
GACATGCAAGATCTGGACTATAGGTGCTTGTCTGAGAGGACGTTCAACCAATAGGTTGTGGTTATTATGACAATCGACCA
CATATGGTGCCTCAGCTATAGTTGCTCTTGGGTTCTCACGTTGAGGGTGCTTGGGGATGGCGACGCTTCACCGATTAGAT
GATCATTCGGACTCTGATCCACCTCAAACTCATCCGTTGGGACGGAGTCAATGGAGCTTCAATGTAGATTCATGACTTCC
AATGGGGCCACGAAGTTAGGTTTTTTTGCCGTGCGTGCGCACCAAGCAAATCTGCTATCAAGAGTCAGTCGCAGGTGTGG
CACAGTGGATGGATTGAAGGGTTTAGTGGCGACGGTTATAGTACTGCAGCGCCGATACTTAGAGACACGTGCTCGAAAAC
TTCCCGACCTTCATTAGCAGTGTCAGACTGGTCCTTTTTTTTACGGGGATGTCAGACTGGTCCTAGTAGGGGAGGGGCGA
CAAAGTGTGTCTTCAGCTCGTTTCGACGGAGGCGATGGTTGCTCGGTGGTCCAAGGATTTTAATATAATTTTTATAATAT
TTAAGGCACTTTATACCACGGATGAACCTTTCCGATAGATCATAC--TGAGGCCTTGTTTGAAGCCTGTAATTTTCGTTC
CCCTTGTTTGTACACCGAGCAATGGATAATGCA-----CTCTGCGTCGTCACGGTGTGCGGCGATCATATGAC-AAGCCA
TTTGCGAGGCAAAAACAATTCAAGGCTCAAGGGTGA------CTACTGAGCACCCACTGACCATTGACTACAATACACGT
GCTCCTCACCACGTACACACACAAG-GAAAATATCCGAAAGCACGACCCCACGACCACATCAAGCAGATAAACATGGCTC
CCAGAGGCCAAACTCAACACAAAAACCCATCCATCCACTGACCCACGGCAAAACCAAATCCGCTGTCGGAAGCC-----T
CCACTCCACTCCACTCCACTCTCTAGCAGCTCCTCAACATTCAACAAGCCACGAGCAGAGCCACCGCGGCCAGCGAGCGC
------GAGTGAGGCGCCGGCGTTCGATCGA----CGAGATGAGCGTGGTGGTCCTGGACGGGTCGACGGTGCGGTCCTT
CGTGGCCGACGAGGCGGCCTTCGCGCGCAGCGTGGATGCGCGCTTCGCCGCGCTCGACGCCAACGGCGACGGCGTGCTCT
CCCGCGCCGAGCTCCGCCGCGCGCTCGAGTCCTTCCGCCTCCTCGACGGCGCGGGCTTCGGCTCCGCCGAGCCGGCCCCG
CTCCCGGGCGAGGTCGCGGCCCTCTACGACGCCGTGTTCGAGCAGTTCGACGCTGACCACAGCGGCGCCGTGGACCGCGC
CGAGTTCCGCGGCGAGATGCGCCGCATCATGCTCGCCGTCGCCGACGGCCTCGGCTGCCAGCCGCTCCAGGTCGCCGTGG
ACGACAAGGGCGGCAGCTTCCTGCTCGAGGCCGCGGAGCACGAGGCCGCCATGATCGCCGCCAGGGTCCAGGAAGAACGC
GACAAGACCGCGGCCGAGGAGGCAGCCGACGGCAAGTGATGACGGCGCCGACGGCTCCACGGTGTGTA--CGTGTCAAGG
TGGTGACGTGGAGTGGCGCGTGGCGTGTACGTGTGAGACGAGTAGTGTGCCGCGTGCGTTTGTCCTGACTCC--TTAGTG
TAATGTACCGAGTATATTATGAAAAAAATCGTTTCAGATTCTCCTAGGGGCTTA-ACATTTGATTCACTGTTAAACTATG
GCTCCCAGCATGCTCACAAATGTTTACGCCTCTGCTTCTCAAAATTAGCGACCAATCATAAGTTCAACGAATTCATTGCC
AATAG--TTTGGCTACAGGTAGCAAACCAAGTACCGCTATTTTTATTTTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAACCAAGTTTACAAGAAAGTCCGGCCCTCCTGGGAACCAG
ACTGCCGTGCGGGGGTTGTTGCCGGAGATGCTCGCCGGAACACCTCCTTCCTCTCTCTCTCGTTCTCTCTCTCTCTCTGA
AAGTTCAGACGAAGAAGAACAGAGACAGGTAGTTTTTGTGCAGCTCGAGTTCTGCTGCGTTTTCTGTTAGCTTTATTCAT
GGATCGACAGGAAAAACGGATCGAGGATGACCCCCTCTACTGGATCGTGCCATCCCACGATCAGGGGCGTGCGCTCGCCG
CGAGCTACGGCCTCGGGATCGCACACACCGTGTCCTCAGGCTGGACTGAAACTGAACACCGAAAAAACTG
>chr5B_651
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----------TTATACCACGCGTTAACCTTTCCGATAGATCACACAGTGAGACCTTGTTTGAAGCCTGTAATTTTCTTTC
CCCTTGTTTGAGCACTGAGCAATGGATAAGGCACTACTCTCTGCGTCGTTACGGTGTGCGGCGATCACATGGTTT-GCCA
TTTGCGAGGCCAAAAAAATTCCAGGCTGAAGGGTGA------CTACTGAGTACCTACTGACCAGTGACTACACTACACGT
GCTCCTCACCACGTACACACAGAAT-GAAAATATCCGAAAGCACGACCCCACGACCACATCAAGCAGATAAACATGGCTC
CCGGAGGCCAAACTCAGCACAAAAACCCATCCATCCAC------------------------------------------
-----------------ACTCTCTAGCAGCTCCTCGACA------AAGCCACGACCAGAGCCACCGCGGCCAGCGAGCGA
GAGCGAGAGTGAGGCGCAGGTGTTCGATCGATCGACGAGATGAGCGTGGTAGTCCTGGACGGATCCACGGTGCGGTCCTT
CGTGGCGGACGAGGCGGCCTTCGCGCGCAGCGTGGACGCGCGCTTCGCCGCGCTCGACGCCAACGGCGACGGCGTGCTCT
CCCGCGCCGAGCTCCGCCGCGCGCTCGAGTCCTTCCGCCTCCTTGACGGCGCCGGCTTTGGCTCCGCCGAGCCGGCCCCG
CTTCCCGGCGAGGTGGCCGCGCTCTACGACGCCGTCTTCGAGCAGTTCGACGCCGACCACAGCGGCGCCGTCGACCGCGC
CGAGTTCCGCGGCGAGATGCGCCGCATCATGCTCGCCGTCGCCGACGGCCTCGGCTGCCAGCCGCTGCAGGTCGCCGTGG
ACGACGAGGGCGGCAGCTTCCTGCTCGAGGCCGCGGAGCACGAGGCCGCCATGATTGCCGCCAGGGTCCAGGAAGAACGC
GACAAGGCCGCGGCCGAGGAGGCAGCCGACGGCAAGTGATGACGGCGCCGACGGCTGCACGGTGTGTA--CGTGTCAAAG
GTGGAG----------------------ACGTGTGAGACGAGTGGTGTGCCGCGTGCGTGTGTCCCGACTCCTTTTAGTG
TAATGTACCGAATATTTTATGAATAAAATCGTTTCCGATTCTCCTAGGGGCTTTGACATTTGTTTCACTGTTAAACTATG
GCTCGCAGCATGCTCACAAATGTTTACGTCTCTGCTTCTCAAAATTAGCGACCAATCATAAGTTCGACGAATGCATTGCC
AATAGAGTTTAGCTACCGGTAGCAAACCAAGTACTGCTATTT--------------------------------------
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>chr5A_720
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-CCTTGTTTGAAGCCT--GCAATGGATAAGGCA---CTCTCTGCGTCGTTACGGTGTGCGGCGATCACATGGCTAAGCCA
TTTGCGAGGCAAGAAAAATTCCAGGCTGAAGAGTGACAATGACTACTGAGTACCTACTGACCATTGACTACACTACACGT
GCT-CTCAGCACGCACACGGAGAAGCGAAAATATCCCAAAGCATGACCCGACGACCACATCAAGCAGATAAACGTGGCTC
CCAGAGGCCAAACTCAACACAAAAAT----------------------------CAAATCCGCTGTCGGAAGTCTCCATT
CCACTCCACTCCACTCCACCCTCCAGCAGATCCTCAACA-------AGCCACGACCAGAGCTGCCGCGGC----GAGCGA
GAGCGAGAGCGAGGGGCCGGCGTTCGACCGA-CGACGAGATGAGCGTGGTGGTCCTGGACGGGTCGACGGTGCGGTCCTT
CGTGGCGGACGAGGCGGCCTTCGCGCGCAGCGTGGACGCGCGCTTCGCCGCGCTCGACGCCAACGGCGACGGCGTGCTCT
CCCGCGCCGAGCTCCGCCGCGCGCTCGAGTCCTTCCGCCTCCTCGACGGCGCGGGCTTCGGCTCCGCCGAGCCGGCCCCG
CTCCCCTCCGAGGTGGCCGCCTTCTACGACGCCGTCTTCGAGCAGTTCGACGCCGACCACAGCGGCGCCGTCGACCGCGC
CGAGTTCCGCGGCGAGATGCGCCGCATCATGCTCGCCGTCGCCGACGGCCTCGGCTGCCAGCCGCTCCAGGTCGCCGTGG
ACGACGAGGGCGGCAGCTTCCTGCTCGAGGCCGCGGACCACGAGGCCGCCATGATCGCCGCCAGGGTCCAGGAAGAACGC
GACAAGGCCGCGGCCGAGGAGGCAGCCGACGGCAAGTAATGACGGCGCCGACGGCTCCACGGTGTGTATACGTGTCAAGG
TGGAGACGTGGAGTGCCGCGTGGCGTGTACGTGTGAGACGAGTGGTGTGCCGCGTGGCGT--------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------SS-S------------------S--------S------------------------S---
----------S----S-------------S-------------------S-----------------S---S--------
---------------S-----S-----S----------------------S---S-----------------S-------
---------------------S----------------------------------------------------------
--------------------------------------SSSSSSSSSSSSSSSS------------------S-------
---------------------------------------SSSSSS---------S------------------------S
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------S-----------------------------S-------------------------------------------
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-----S--------S--S-----------------S-----------------S-----------------S--------
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-----S--------------------------------------------------------------------------
------S-------------------------------------------------------------------------
---S-----------S---------------------------S---------------------S--------------
-----------S---S-------S-----------S-----------------S--------S-----------------
----S-----------------------S------------------------------------S------S-------
----------S-----S-----------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_463
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-------------------------------------------CTGCAGCGCCGATACTTAGA-----------------
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>reverse_2450
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-------------------------------------------------TACAAGAAAGTCCGGCCCTC-----------
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