>input_sequence_69780
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-ATGGCTTCAAAGTTCTTCCTCCTTGCTCTTTTGGCTTTGTCGGCTTCTCATGCTCTTGCCTCGGACCCGGGCCAGCTCC
AGGATTTCTGTGTCGCTGACAAGACATCTCAAGGTA-TGTATAGTTA-ACATGCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTAGTGCC--------AATGCATAGCTGTTAACTGTTCGAAATTTGTATATGCATACCTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCGGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGCCGGGAAC
ACAAGCAACAAGCAAGGCTCCATTGTGACTGCAGTTAACGTGGCACAGATTGCTGGGCTGAACACTTTGGGCGTCTCATT
GGCTCGTGTTGATTACGCACCCTATGGTCAAAACCCACCACACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AAGGCTCACTATATGTTGGTTTCGTGACTTCAAACCCCGAGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTG
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATTGAAAACAACGAAGCGATAGCCATTGCGGCGCTGAGCAG
CAAGAACCCTGGTGTGATCACCATAGCCAATGCGGTCTTCGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATTGTAGACCATATCCAAGCTCAGTTCTAG------------------------------
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>chr1D_1_TraesCS1D01G054600
GTAAGCTGAAGCCACCGTCTAGGCAACATCTGTCGCTACTCATATCCAGTTGATGAAGAGATGCTGATAGTCCGGGCCTA
ATACCATAGACCTCGCAGTCAAGCCTAACATCTAAGACCTGAGACCCCAACAAGCCACTTGCCGGGTATGAGGCACACAC
CGGTCCGGCGCGCTCTCAGAGGCCGCCGCCGCCAACTGCCGCCACTCCATCTTCAGAGGTGTACTGACGCATCATCCTTG
CCCGGTCTAGTAAACGCATTCCATAACAAGGTAATTATTTGGTCACTCATATGCGGCAAGGTTGCCACGACACTTAAGGT
CAGCCCTTAATCGTCCCAGGCGAGAGACTGTGAACAGACTGATCAGGCTTTCTAGGTATCTTTCTAGTGTACAGTAGCTT
CCAAGTGCTAGTTGAAGAAAGAAAGAAAGAAGTTTGGATGAAGATGCAGCAGAGTGGTGCATACAATACAAGATAGAAAG
CTTTCCACTGGAACG----CGTCCGTGCTGGCCTGCTCCTGCACGGAAGTATTTTCTATTACTGTTTTTTTTAACTATTA
CCGTTTTGTTACTATTACAGCTGTGTTTACAAGTTAGCCCTTTAATAATGTGTTTAAGCCTTTACGTTGATGGCAGGATC
GCCAAGTTCCATCTGGTCCAAGTGTGGAGCCAAGACACGAGACAAGAGAGCCAGTACAAG-TATGAATATGACTTGTTCA
AACTATTCATGCAGAGAAATTAAAATACGGATTGGGATCTATTAGTTGGCCGTCACAGGAAGGCCGGTCAGGAACACGCT
TTAGACTTGG-AATTAGACAG---CTAGTGAAGACCATTTCCTTCTTATCCACAGGCACCCC-AACAAAACAAACACAAA
AGA------------TTTTCCTCCATGTCCCTATATATACCGATGTCGTC-CAACCCGTTGAAGCATCACTGT------C
GAGCACAATCACT-------TCTTCTCTACCT---GATCAAACACAC--TACATTTAGCGAGAATCAACGTTCGCATCCA
AATGGCTTCAAAGTTCTTCCTCCTTGCTCTTTTGGCTTTGTCGGCTTCTCATGCTCTTGCCTCGGACCCGGGCCAGCTCC
AGGATTTCTGTGTCGCTGACAAGACATCTCAAGGTA-TGTATAGTTA-ACATGCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTAGTGCC--------AATGCATAGCTGTTAACTGTTCGAAATTTGTATATGCATACCTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCGGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGCCGGGAAC
ACAAGCAACAAGCAAGGCTCCATTGTGACTGCAGTTAACGTGGCACAGATTGCTGGGCTGAACACTTTGGGCGTCTCATT
GGCTCGTGTTGATTACGCACCCTATGGTCAAAACCCACCACACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AAGGCTCACTATATGTTGGTTTCGTGACTTCAAACCCCGAGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTG
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATTGAAAACAACGAAGCGATAGCCATTGCGGCGCTGAGCAG
CAAGAACCCTGGTGTGATCACCATAGCCAATGCGGTCTTCGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATTGTAGACCATATCCAAGCTCAGTTCTAGATCGACATACACACCTAGTGGTTTGATTCA
TTTG-TCCTTACCAAAACAGTT-ATTATGCGAGTTTCTTTATGATGCAA----TTCTA--CTTTGTGGTTACGTTAATCA
AGTTTATAGAAAAGGAATTTTATTCTCTTTTTTTTTTGTGGAATAATTTTATTCTCTTTTGTGCTGGATATTATTTCCTT
GGTCATCTCAATTGGTAAAAGTAAACTGCCTAATAAGTTGTG--GGCTAACTTAACTGGC--------AAGTGGCATTAC
GGTTGTGTGTTCGTTCGCTTTTGTTCAAGTCACTTTGTAAACATAGAAAGGAAGTGCCCATGTGCTCAATGTATTCTTCA
TCGAGAATTCAAGTCACTT----TGTAAACATAAAAACAAAGGGCTCAAGTGTTAAAGCTATTCTTCATCGACAATTTT-
TATATGGTCCCTAAGAGGTAAGGGCAACTCTAACCGATCCCCTATCCGGTTGTAAGGGAGGATAAATCCGGTTATTCCCC
TCTACACCGCACCTAGTCGGT--CCCCCATAAACCGAATAGAGGAGGATAATTTATCCTCCTCCGCCGAAAAA-CCCTCC
AATCTCCTTAAATATCCTCACTGCGCGCGCGGCTGAGTAAAAGCGGCGCCCCTTCTCTCCCGCCCTTGGGCCGGCTCCAC
TCCCGCCACAACCACTATCACGCCACGCTGCTGCCATTGATGACCGGACCTCCCGCGGGAATGGATAGCCCGGACCCTTC
CCCCACCCCT--CTGGCTTG-------------TCACCGCCGAAAACAACCCTCACGCCGGTGTTCGCGGCAAAGAAAAG
CTTGGGGATAAG-AAAAAGTCCACTTGGTTCAAGCTCTGTCTCCAACTGCGACAAAGGCTGCCAGGGTGGCGACCGCCT-
CTTCGGTGACAA-----------CCTGTCTCTCCCGCCGGAGCCAAACAGGATAGAAAACCAACGACGGGGGCATCGGCC
CTCGTCGAGGAGGCCATGAAGTAGAAGAAGAAAAAGGCCACAATGGTGCCCAGTCCATGGCCGG
>chr1A_251
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----------TAAACGCTTTCCATAACAAGGTAATAATTTGGTCACTCATATTAGGCAAGGTTGCCACGACACTTAAGGT
CACTCATGTCTTGGCTCCACACTTGGTC---------ACTCATCAGGTTTTCTAGGTATCTTTCTACTGTAGTAT--CTT
CAAAGTGCTACTTGAAGAAAGAAAGAAAGAAGTTTGGACCAAGATGCAGCAGAGTGGTGCATACAA-----GAT------
--------------G----CGTCCGTGTTGGCCTGCTCCTGCACGGAGGTATTTTCTG-------------------TTA
CTGTTTTGTTACTGTTACAGCTGTGTTTACAAGGTAGCCCTTTAATAATGT-TTTAAGCCTTTAGGTTGATGGCAGGATC
GCCAAGTTCCATCTGGTCCAAGTGTGGAGCCAAGACACAAGACAAGAGAGCCAGTACAAG-TACGAATATGACTTGTTCA
AACCATGCATGCAGACAAATTAAAATACTGATTGGGATCTATTAGTTGGCCGTCACTGGAAGGCCGGCCAGGAACACGCT
TTAGACTTGG-AATTAGACAGCCACTAGTGAAGACCATTTCCTTCTTATCCACAGGCGCCCC-A-CAAAACAAACACAAA
AGA------------TTTTCCTCCATGTCCCTATATATACCGGTCTCCTTTCAACCCTTACAAGCATCACTGTGCAGCAC
GAGCACAATCACT-------TCTTCTCTACCT---GATCAAACACACACTTGATTTAGCGAGAATCAACGTTTGCATCCA
AATGGCTTCAAAGTTCTTCCTCCTTGCTCTTTTGGCTTTGTCAGCTTCTCATGCTCTTGCCTCGGACCCGGGCCAGCTCC
AGGATTTTTGTGTCGCTGACAAGACATCTCAAGGTA-TGTATAATTACACATGCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTAGTGCCAAACTGCCAATCCATAGTTATTAATTGCTCGAAATCTATATATGTATATGTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAATGACCGCAGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGTCGGGAAC
ACGAGCAACAAGCAAGGCTCCGTTGTGACTGCAGTTAACGTGGCACAGATTGCCGGGTTGAACACTTTGGGTGTCTCATT
GGCGCGTGTTGATTATGCACCTTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AAGGCTCACTATATGTTGGTTTCGTGACTTCGAACCCCGAGAACAAGTTGTTCTCAAAAGTGTTGAACAAAGGGGACGTG
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATTGAAAACAACGAAGCGATAGCCATTGCGGCGCTGAGCAG
CAAGAACCCTGGTGTGATCACCATAGCCAATGCGGTTTTCGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATTGTAGACCATATCCAAGCTCAGTTCTAGATCGACATGCACACCTAGTGGTTTGATTCA
TTTG-TCCTTACCAAAACAGTT-ATTATGCAAGTTTCTTTATGATGCAA----TTCTA--CTGTGTGGTTACGTTAATCA
AGTTTATAGAAAAGGAATTTTAT-----------------------------TCTCTTTTGTGCTGGATATTATTTCGTT
GGTCATCTCAATTGGTAAAAGTAAACTGCCTAATAAGTTGTGTGGGCTAACTTAACTGGC--------AAGTGGCATTAC
GGTTGTGTGTTCCTTCGCTTTTGTTCAAGTCACTTTGTAAACATAGAAAGGAAGTGCCCATGTGCTCAATCTATTCTTCC
TCGAGAATTCAAGTCACTT----TGTAAACATAAAATCGAAGGGCTCAAGTGTTAAAGCTATTCTTCATCGACAATTTTT
TAAATGGTCCCTAAGAGGTAAGGGCAACTCTAACCGATCCCCTATCCGGTTGTAAGGGAGGATAAATCCGGTTATTCCCC
TCTACACCGCACCTAGTCGCCCCCCCCCCTAAACCGAATAGAGGA------TTTATCCTCCTCCGCCGAAAAA-CCCTCC
AATCTCCTTAAATATCCTCACTGCACGC--GGCTGAGTAAAAGCAACGCCCCTT-TCTCCCGCCCTTGCGCCGGCTACAC
TCCTGCCACAGCCACTATCACACCCCACTGTTGCCATCGATGACCGGACCTCCCACGGGAATGGATAGCCCGGACCCTTC
CCCCACCCCT--CCGGCTTG-------------TCACCGCCAAAAACAACCCTCGCGTTGCCATTCGTGGCAAAGAAAAG
CTTGGGGATAAG-AAAAAGTCCACTAGGTTCAAGCTCTGTCTCCAACTGCGACAAAGGCTGCTAGGGTGGCGACCGCCT-
CTTCGGTGACAA-----------CATGTCTCTCCCGCCGGAGCCAAACAGGATAGAAAACCGACGGCAGGGGCATCGGCC
CTCGTCGAGGAGGCCATGAAGTAGAAGAAGAAAAAGGCCACAATGGTGCCCCGTCCATGGCCGG
>chr1B_251
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----------TAAACGCATTCCATAAGAAGGTAATAATTTGGTCACTCTTGTTAGGCAAGGTTGCCACGACACTTAAGGT
CAGCCTTTAATCGTCCCAGGCGAGAGACTGTGAACAGACTGATCAGGCTTTCTAGGTATCTTTCTAGTGTGTT---GCTT
CCAAGTGCTAGTTGAAGAAAGAAAGAAAGAAGTTTGGACGAAGATGCAGCAGAGTGGTGCATACAA-----GATAGAAAG
CTTTCCACTGGAACGCGTCCGGCCGTGCTGGCCTGCTCCTGCACGGAGGCATTTTCTATTAC------------------
------------------AGCTGTGTTTACAAGTTAGCCCTTTAATAATGTGTTTAAGCCTTTACCTTGATGGCAGGAAC
TCCAAGTTCCATCTGGTTCAAGTGTGGAGCCAAGACACAAGACAAGAGAGCCAGTACAAG-TACGAATACGACTTGTTCA
AACCATGGATGCAGAGAAATTAAAATACTGATTGGGATCTATTAGTTGGCCGTCACTGGAAGGCCGGTCAGGAACACGCT
TTAGACTTGG-AATTAGACAG---CTAGTGAAGCCCATTTCCTTCTTATCCAAAGGCGCCCCAA-CAAAACAAACACAAA
AGA------------TTTTCCTCCATGTCCCCATATATACCGGTCTCCTT-CAACCCTTAGAAGTATCACAGTGCAGCAC
GAGCACAATCACT-------TCTTCTCTACCT---GATCAAACACAC--TTGATTTAGCGAGAATATACGTTCGCAAAAA
AATGGCTTCAAAGTTCTTCCTCCTTTCCCTTTTGGCTTTGTCAGCTTCTCGTGCTCTTGCCTCTGACCCGGGCCAGCTTC
AGGATTTCTGCATCGCTGACAAGACATCTCAAGGTA-TGTATAATTACACATGCATACG----TGCA--GTGAAATATGC
CTAGTTACTTATTAGTGCCAAACTGCCAATGCATAGCTGTTAACTGTTCGAAATTCATATATGTATACCTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCGGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGCCGGGAAC
ACGAGCAACAAGCAAGGCTCCATTGTGACTGCAGTTAACGTGGCACAGATTGCTGGGCTGAACACTTTGGGTGTCTCATT
GGCTCGTGTTGATTATGCACCCTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AGGGCTCACTCTATGTTGGTTTCGTGACTTCTAACCCCGGGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTT
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATTGGAAACAACGAAGCGATAGCCATTGCAGCGCTGAGCAG
TAAGAACCCTGGTGTGATCACCATAGCCAATGCGGTTTTTGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATCGTAGAGCATATCCAAGCTCAATTCTAGATTGACATACAT--CTGGTGGTTTGATTCA
GTTCTTCCTTATCTAAACATTT-GTTTTGTGTGTTTCTTTACGATATCT----TTCTATTTTGTATGGTTATGTTAATTG
AGATTACAGAA---------------------------------------------------------------------
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>chr1B_251
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----------TAAACGCATTCCATAAGAAGGTAATAATTTGGTCACTCTTGTTAGGCAAGGTTGCCACGACACTTAAGGT
CAGCCTTTAATCGTCCCAGGCGAGAGACTGTGAACAGACTGATCAGGCTTTCTAGGTATCTTTCTAGTGTGTT---GCTT
CCAAGTGCTAGTTGAAGAAAGAAAGAAAGAAGTTTGGACGAAGATGCAGCAGAGTGGTGCATACAA-----GATAGAAAG
CTTTCCACTGGAACGCGTCCGGCCGTGCTGGCCTGCTCCTGCACGGAGGCATTTTCTATTAC------------------
------------------AGCTGTGTTTACAAGTTAGCCCTTTAATAATGTGTTTAAGCCTTTACCTTGATGGCAGGAAC
TCCAAGTTCCATCTGGTTCAAGTGTGGAGCCAAGACACAAGACAAGAGAGCCAGTACAAG-TACGAATACGACTTGTTCA
AACCATGGATGCAGAGAAATTAAAATACTGATTGGGATCTATTAGTTGGCCGTCACTGGAAGGCCGGTCAGGAACACGCT
TTAGACTTGG-AATTAGACAG---CTAGTGAAGCCCATTTCCTTCTTATCCAAAGGCGCCCCAA-CAAAACAAACACAAA
AGA------------TTTTCCTCCATGTCCCCATATATACCGGTCTCCTT-CAACCCTTAGAAGTATCACAGTGCAGCAC
GAGCACAATCACT-------TCTTCTCTACCT---GATCAAACACAC--TTGATTTAGCGAGAATATACGTTCGCAAAAA
AATGGCTTCAAAGTTCTTCCTCCTTTCCCTTTTGGCTTTGTCAGCTTCTCGTGCTCTTGCCTCTGACCCGGGCCAGCTTC
AGGATTTCTGCATCGCTGACAAGACATCTCAAGGTA-TGTATAATTACACATGCATACG----TGCA--GTGAAATATGC
CTAGTTACTTATTAGTGCCAAACTGCCAATGCATAGCTGTTAACTGTTCGAAATTCATATATGTATACCTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCGGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGCCGGGAAC
ACGAGCAACAAGCAAGGCTCCATTGTGACTGCAGTTAACGTGGCACAGATTGCTGGGCTGAACACTTTGGGTGTCTCATT
GGCTCGTGTTGATTATGCACCCTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AGGGCTCACTCTATGTTGGTTTCGTGACTTCTAACCCCGGGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTT
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATTGGAAACAACGAAGCGATAGCCATTGCAGCGCTGAGCAG
TAAGAACCCTGGTGTGATCACCATAGCCAATGCGGTTTTTGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATCGTAGAGCATATCCAAGCTCAATTCTAGATTGACATACAT--CTGGTGGTTTGATTCA
GTTCTTCCTTATCTAAACA-TT-GTTTTGTGTGTTTCTTTACGAT-----------------------------------
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>chr1D_597
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----------------------------------------TTTAATAATGTGTTTAAGCCTTTAGGTTGATGGCTGCATC
GCCAAGTTCCGTCTGGTTCAAGTGTGGAGACATGACACAAGACAAGAGAGCTAGTACAAGCTACGAATATGACCTGTTCA
AACCATA----CAGAGAAATTAAAAGAGAGGGTGAGATCTATTAGTTGGCCGTCACAGGAAGGCCGGCCAGGAACACGCT
TTAGACTTGGGAATTAGAAAG---CTAGTGAAGACCATTTCCT-----TCCACATGCGCACCAA-CAAAACAAACACAAA
AGA------------TCTTCCTCCATGTCCCTATATATACTGGTCTCCTC-CAACCCTTTGAAGCATCACTGTGCAGCCC
GAGCGCAAGCAGTTCTTCTCTCTTCTCTACCT---GATCAAACACAC--TTGATTTAGTGAGAATCAACGTTCGCATCCA
AATGGCTTCAAAGTTTTTCCTCCTTGCCCTGTTGGCTTTGTCAGCTTCTCATGCTCTTGCCTCTGACCCGGGCCAGCTTC
AGGATTTCTGCGTCGCTGACAAGACATCTCAAGGTA-TGTACAATTACACATTCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTAGTGCC--------AATGCATAGTTGTTAATTGCTCGAAATCTGTATATGTATATGTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCAGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGTCGGGAAC
ACGAGCAACAAGCAAGGCTCCGTTGTGACTGCAGTTAACGTGGCACAGATTGCCGGGTTGAACACTCTGGGTGTCTCATT
GGCGCGTGTTGATTATGCACCCTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AAGGCTCACTCTATGTTGGTTTCGTGACTTCGAACCCTGAGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGATGTG
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTCAACATCGGAAACAACGAAGTGATAGCCATTGCGGCGCTGAGCAG
CAAGAACCCTGGAGTGATCACCATAGCCAATGCGGTTTTTGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATCGTAGACCATATCCAAGCTCAATTCTAGATTGACATACAT--CTGGTGGTTTGATTCA
TTTGTTCCTTAACTAAACA-TTCATTATGTGTGTTTCTTTACGATATCG----TTCTA-TTTGTATGGTTATGTTAATTG
AGATTACAGAA---------------------------------------------------------------------
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>chr1D_597
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----------------------------------------TTTAATAATGTGTTTAAGCCTTTAGGTTGATGGCTGCATC
GCCAAGTTCCATCTAGTTCAAGTGTGGAGACAAGACACAAGACAAGAGAGCTAGTACAAGCTACGAATATGACTTGTTCA
AACCATG----CAGAGAAATTAAAAGAGAGGGTGAGATCTATTAGTTGGTCGTCACAGGAAGGCCGGCCAGGAACACGCT
TTAGACTTGGGAATTAGAAAG---CTAGTGAAGACCGTTTCCTCCATATCCACATGCGCACCAA-CAAAACAAACACAAA
AGA------------TCTTCCTCCATGTCCCTATATATACCGGTCTCCTC-CAACCCTTTGAAGCATCACTGTGCAGCAC
GAGCGCAAGCAGT-------TCTTCTCTACCT---GATCAAACACAC--TTGATTTAGTGTGAATCAACGTTTGCATCCA
AATGGCTTCAAAGTTTTTCCTCCTTGCCCTGTTGGCTTTCTCGGCTTCTCGTGCTCTTGCCTCTGACCCGGGCCAGCTTC
AGGATTTCTGCGTCGCTGACAAGACGTCTCAAGGTA-TGTACAATTACACAGTCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTAGTGCC--------AATCCATAGTTGTTAACTGCTTGAAATATGTATATGTATATGTGCAGTTTTTG
TCAATGGATTCGCATGCAAGGACCCAAAGACCACAGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGCCGGCAAC
ACAAGCAACAAGCAAGGCTCCATTGTGACTGCAGTTAACGTGGCACAGATTGCCGGGTTGAACACTTTGGGTGTCTCATT
GGCGCGTATTGATTATGCACCTTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCCGACAGTGTTGG
AAGGCTCACTCTATGTTGGTTTCGTGACTTCAAACCCTGAGAACAAGTTGTTATCAAAAGTTTTGAACAAAGGGGACGTG
TTTGTGTTTCCACAAGGCTTGATTCACT----------------------------------------------------
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>chr1A_603
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----------------------------------------------AATGTGTTTAATCCTTTAGGTTGATGGCTGCATG
GCCAAGTTCCATCTGGTTCAAGTGTGGAGACAAGACACAAGACAAGAGAGCTAGTACAAGCTACGAATATGACCTGTTCA
AACAATG----CAGAGAAATTAAAAGAGATGGTGTGATCTAATAGTTGGCCGTCACAGGAAGGCCGGCCAGGAACACGCT
TTAGACTTGGGAATTAGAAAG---CTAGTGAAGACCATTTCCTTCATATCCACATGCGCACCAA-CAAAACAAACACAAA
AGA------------TCTTCCTCCATGTCCCTATATATACCGGTCTCCTT-CAACCCTTTGAAGCATCACTGTGCAGCAC
GAGCGCAAGCAGT-------TCTTCTCTACCT---GATCAAACACAC--TTGATTTAGTGAGAATCAACGTTCGCATCCA
AATGGCTTCAAAGTTTTTCCTCCTTGCCCTGTTCACTTTGTCGGCTTCTCGTGCTCTTGCCTCTGACCCGGGCCAGCTTC
AGGATTTCTGCGTCGCTGACAAGACATCTCAAGGTA-TGTACAATTACACATTCATATG----TGCA--GTGAAATGTTC
CTAGTTACTTATTTGTGCC--------AATCCATAGTTATTAATTGCTCGAAATCTGTATATGTATATGTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCAGTGGTAGAGGACTTCTACTTCTCTGGCCTCCACATGGTCGGGAAC
ACGAGCAACAAGCAAGGCTCCGTTGTGACTGCAGTTAACGTGGCACAGATTGCCGGGTTGAACACTTTGGGTGTCTCATT
GGCGCGTGTTGATTATGCACCTGATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTGACAGTGTTGG
AAGGCTCACTCTATGTTGGTTTCGTGACTTCGAACCCTGAGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTG
TTTGTGTTTCCGCAAGGGTTGATTCACTTTCAGTTTAACATTGGAAACAACGAAGCGATAGCCATTGCGGCGCTAAGCAG
CAAGAACCCCGGTGTGATCACCATAGCCAATGCGGTTTTTGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
GCTTCCAGGTGGACAAGAACATCATAGACCATATCCAAGCTCAATTCTAGTTCAACATACAT--CACGTGGTTTGATTCA
TTTGTTCCTTAATTAAACA-TTTATTTTGTGTGTTTCTTTATGATATATATAGTTCTA--TTGTATGGTTATGTTACTCA
AGTTTATATTAAAGGAACAATAT-----------------------------TCTCTTTTGTGCTGGATATTATTTCCTT
TGTCATCTCCATTTTTTAAAGTAAACTGCCTAATAAGTCATG--GGCTGACTTAACTGCAAACTAGGGAAGTGGCATTAT
GGTTGTGTGTTTCTTCTATTTTGTTCAAGTCACTTTGTAAACATAAAAAGGAAGTGCTAATGTGCTCAATCTATTCTCCA
TCCAGAATTTAAGTCACTTTT-TTGTAAACATAAAAAGGAAGCTCTCAAGTGCTCAATCTATTCTTCATCAAGGATTTTT
GAAATGGCGCCTAAGAGGTAAG----------------------------------------------------------
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>chr1A_603
--------------------------------------------------------------------------------
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----------------------------------------------AATGTGTTTAATCCTTTAGGTTGATGGCTGCATG
GCCAAGTTCCATCTGGTTCAAGTGTGGAGACAAGACACAAGACAAGAGAGCTAGTACAAGCTACGAATATGACCTGTTCA
AACAATG----CAGAGAAACTAAAAGAGATGGTGTGATCTATTAGTTGGCCGTCACAGGAAGGCCGGCCAGGAACACGCT
TTAGACTTGGGAATTAGAAAG---CTAGTGAAGACCATTTCCTTCATATCCACATGCGCACCAA-CAAAACAAACACAAA
AGA------------TCATCCTCCATGTCCCTATATATACCGGTCTCCTC-CAACCCTTTGAAGCATCACTGTGCAGCAC
GAGCGCAAGCAGT-------TCTTCTCTACCT---GATCAAACACAC--TTGATTTAGTGAGAATCAACGTTCACATCCA
AATGGCTTCAAAGTTTTTCCTCCTTGCCCTGTTGGCTTTGTCGGCTTCTCGTGCTCTTGCCTCTGACCCGGGTCAGCTTC
AGGATTTCTGCGTCGCTGACAAGACATCTCAAGGTA-TGTACAATTACACATTCATACG----TGCA--GTGAAATGTTC
CTAGTTACTTATTTGTGCC--------AATCCATAGTTATTAATTGCTCGAAATCTGTATATGTATATGTGCAGTTTTTG
TCAATGGATTCGCATGCAAAGACCCAAAGACCGCAGTGGTAGAGGACTTCTACTTCTCTAGCCTCCACATGGTCGGGAAC
ACGAGCAACAAGCAAGGCTCCGTTGTGACTGCAGTTAACGTGGCACAGATTGCCGGGTTGAACACTTTGGGTGTCTCATT
GGCGCGTGTTGATTATGCACCTTATGGTCAAAACCCACCGCACCTTCACCCTCGTGCAACCGAGATCCTAACAGTGTTGG
AAGGCTCACTCTATGTTGGTTTCGTGACTTCGAACCCTGAGAACAAGTTGTTCTCAAAAGTTTTGAACAAAGGGGACGTG
TTTGTGTTTCCGCAAGGGCTGATTCACTTTCAGTTTAACATTGGAAACAACGAAGCGATAGCCATTGCGGCGCTAAGCAG
CAAGAACCCCGGTGTGATCACCATAGCCAATGCGGTTTTTGGATCCAAGCAAACCATCTCAGATGATATCCTGGCCAAAG
CCTTCCAGGTGGACAAGAACATCATAGACCATATCCAAGCTCAATTCTAGTTCAGCATACAT--CACGTGGTTTGATTCA
TTTGTTCCTTAATTAAGCA-TTTATTTTGTGTGTCTCTTTATGACATATATAGTTCTA--TTGTATGGTTATGTTACTCA
AGTTTATATTAAAGGAACAATAT-----------------------------TCTCTTTTGTGCTGGATATTATTTCCTT
TGTCATCTCCATTTTTAAAAGTAAACAGCCTAATAAGTCGTG--GGCTGACTTAACTGCAAACTAGGGAAGTGGCATTAT
GGTTGTGTGTTTCTTCTATTTTGTTCAAGTCACTTTGTAAACATAAAAAGGAAGTGATAATGTGCTCAATCTATTCTCCA
TCCAGCATTTAAGTCACTTTTTTTGTAAACATAAAAAGGAAGCTCTCAAGTGCTCAATCTATTCTTCATCAAGGATTTTT
GAAATGGCGCCTAAGAGGTAAG----------------------------------------------------------
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----------------------------------------------------------------
>chr2B_816
--------------------------------------------------------------------------------
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------------------------CTAGCGAAGAACAGTTCCTTCATATCCACATGCTCCCCGA-CAGAACAAACACAAT
GCTTTTCGATCCTCCTTTTCCTCAA--TCACTATATATAAGAGCCTCCTA-CAACCCTTCGAGGCATCACCGTGCAGCAT
CAGCACAATCACT-------AGCACTTTCCCTAGAGATTAAACACAC--TCAATTAAGTGAGAATCAACGCTCACATTCG
AATGGCGGCAAAGTTCTTCCTCATTGCCCTTCTGGCTCTGTCATTTTCCCGTGCTCGTGCCTCGGACCCGAGCCAGCTCC
AAGATTTCTGCGTCGCTGACAGGACATCCCAAGGTAATGTATAACCACACATGCGTACG----TGTGTGGTGAAATGTTT
GC-TGTAATTATCAATGCC--------AAT-CATAGTTGTTAACTCTTTAATATCATGTAATGTGCA--TGCAGTTTTTG
TCAATGGATTTGCCTGCAAGGACCCGAAGGCTGCGGAGGTAGAAGACTTCTTCTTCTCTGGCCTTCACATGTCCGGGAAC
ACGAGCAACAAGCAAGGCTCCGCTGTGACGGCGGTTAATGTGGCGCATATTGCTGGGCTGAACACTTTGGGCATCTCCTT
GGCTCGGGTTGATTATGCTCGATATGGTCAAAACCCACCCCACATCCACCCCCGTGCATCTGAGATCCTGACGGTGGTAG
AAGGCTCACTCTATGTTGGTTTCGTGACCTCGAACCCCGAGAACAAGTTGTTCTCAAAAGTTCTTAACAAAGGGGATGTT
TTTGTGTTTCCACAAGGGCTAATTCACTTTCAGTACAACTGCGGAACCAAAAAAGCTATAGCCATTGCGGCGCTGAGCAG
CAAGAACCCTGGAGTGATCACCATAACCAATGCGGTGTTTGGATCCAAGCCGTCCATCTCAGATGATATCATTGCCAAAG
CCTTCCAGGTGGACAAGAAGATTGTTGACCATATTCAAGCTCAGTTCTA-------------------------------
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>chr1B_975
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-------------------------------------------------------TAGTGAGAATTAACGTTCGCATCCA
AATGGCCTCAGGATTCTTCCTCCTTGTTCTTTTGGCTCTATCAGCTTCTCGTCCTCTTGCCTCCGACCCTGGCCAGCTCC
AGGATTTCTGCGTCGCTGACAGGACATCCCAAGGTA-TGTATAATCACACATGCGCGCATCACTACA--CTGAAACGTCT
AG-GTTACTTATTTGTGCC--------AATATGTAGTTGTTAACTGTTCAAAAACTGTGTATGTA--TGTGCAGTTTTCG
TGAACGGATTTGCATGCAAAGACCCAAAGACTGCCTTGGTAGAAGACTTCGTCTTCTCGGGGCTTCACATGGCTGGGAAC
ACGAGCAACAAGCAAGGCTCTTCTGTGACCGCAGTTAACGTCGCGCAGATTGCTGGATTGAACACTTTGGGCATCTCCCT
TGCTCGTGTTGATTATGCATCCCATGGTCAAAACCCACCGCATATCCACCCCCGTGCAAGTGAGATCCTGACTGTGCTAG
AAGGTTCGCTCTATGTTGGTTTCGTGACCTCGAACCCTGAAAACGAGCTGTTCTCAAAAGTTTTGAACAAAGGGGATGTG
TTTGTCTTTCCACAAGGGCTGATTCACTTCCAGTTCAACTATGGAACTAGCAAGGCGATAGCCATTGCGGCGCTGAGTAG
CAAAAACCCCGGAGTGATCACCATAGCAAATACGGTGTTTGGATCAAATCCATCCATCTCAGATGATATACTTACCAACG
CCTTCCAGGTGGACAAGAAGATGGTAGACCATATTCAAGCTCAATTCTAG------------------------------
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>chr6D_2178
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-----------------GTAAGGGCAACTCTAACCGATCCCCTATCTGGCACTAAGGGAGGATAAATTCGGTTATCCTCC
CTTACGCCGCACCTAGCCGAT----CCCCTAAAATGATTAGTGGAGGATATATTATCCTTCTCCGTCGCAAAAAAACCCC
GATCTCCCTAAATATCCTCACCGCACGCCCGGCTGAGGAATAGTGGCGCCTCCTCTCCCGCCTCCTCTT-----------
TCCCGCCACAGCCGCCTCCACGCCCTGCCACTGCCACCGATGACCGAACCACCCACCAGAATGGATACCCTGGACCCCGC
CAGCCACC-----------G-------------TCGCTGCCGGAAACGACCCTCGTGCCGCCGCCCGCGCTGAAGAAGAG
CTTGGGGATAAA-AAAATCGATCG--GGTTCAAGCTCCGGCTCCAACCGTGGCAAAGGCTGCCGGGGTGGAAAGC-CCTT
CTTCGGTGATGGTGCGCCGCCCTCCTACTGCTCCCCCCGCATCCAAACGAGCAAGAAAACCAATGGCGGTGGCACGGTCC
CTCGCCGAGGGGGCCGCGAAGAGGAAGAAGAAAAATGCCACAACGGCGTCCCGCCCACGGCTGG
>chr6A_2179
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------------------TAAGGGCAACTCTAACCGATCCCCTATCTGGCACTAAGGGAGGATAAATTTGGTTATCCTCC
CTTACGCCGCACCTAGCGGAT----CCCCTAAAATGATTAGTGGAGGATATATTATCCTTCTCCGTCTCAAAAAAAACCC
GATCTCCCTAAATATCCTCATCGCACGCTCGGCTGAGGAATAGTGGCGCCTCCTCTCTCGCCTCCTCTT-----------
TCCTGCCACAGCCGCCTCCACGCCCCGCCGCTGCCACTGATGACCGAACCACCCACCAGAATGGATACCCTGGACCC-GC
CAGCCACCGTCGCTAGCTTG-------------TCGCCGCCAGAAACGACCCCCGTGCGGTCGCCCGCGCTGAAGAAGAG
CTTGGGGATAAAGAAAGTCGACCG--AGTTCAAGCTCCGGCTCCAACCATGGCAAAGCCTGCCGGGGTGGAAAGC-CCT-
CTTCGGTGACGGTGTGCCGCCCTCCTGCTGCTCCCCCCGCATCTAAACGAGCAAGAAAACCAATGGTGGTGGCACCGTCC
CTCGCTGAGGAGGCCACGAAGAGGAAGAAGAAAAAGGCCACAACGG------------------
>chr2B_2181
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--------------------AGGCCAACTCTAACCGATCCCCTATCTGGCCGTAAGGGAGGATAAATTCAATTATCCTTC
TCTACGCCGCAACTAGCCAAT----CCCCTAAACCGAATAGAGGAGGATAATTTATCCTCCCCCATCGAGAAATCCCTCC
AATCTCCCTAAATATCCTCACCATGTGTCCGATTGAGTAAAAGTGGTGCCTCCCGTCTCCTGCCCTCGCGTCGGCTCCAT
TCCCACTGCAGCTGCCACCATGCCCCGCCGCCGCCACTGATGACCGACCCTTCTGTCAAAATGGATAGCCCGGACCCTTC
CGACACCCCA--CTGGCCATCGTTGTCGGCTTATTGCTGTAGGAAATGACCCCCGCACCACCGCTTGCACCAAAGAAAAG
CTTGTGGGGAAC-AAAGTCCACCG--GA--CAAGCTCCGGATCCAACCGCGGCAAAGGCCGCCGGGGTGGCGACTGCCT-
CTCCGGGGACAGCCCGCCGCCCGCCCGCCGCTCACGCTAGAGTCAAAAGAGCTAGCAAACCAACGGCGGCGGCATCGGCC
CTTGTTGAGGTGGTTGCGAAGAAGAGGAAGAAAAAGGTCACAACGATGCCCCATCCACGGCCGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS-------------------------S----------------SS--------------------------
-----S-----------------------------------------------------------------SSS-S----
--------------------------------------S---------------------------SSSSS---------
-----------------------------------------------S--------------SSSSSSSSSSSSSSS---
-S-----------S------------------------------------------------------------------
--------------------------------------S------------------------S----------------
---S--S---------------------S---------------------------------------------------
---------------------------------------------------------S------S---------------
------------------------------------------S-S--S---------S----------------------
--------------------------------------------------SS----------------------------
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-------------------------------------------S------------------------------------
---------------------------------------------------------------S----------------
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---------------S-----------------------S----------------------------------------
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------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--------------------------------------------------------------------------------
------------S---------------------------------------------------------S---------
--------------------------------------S-----------------------------------------
--S-----------------------------------------------------------------------------
-------------------S--------S---------------------------------------------------
----------------------------S---------------------------------------S-----------
----------S-------------S-------------------------------------------------------
------------------------------------------------------S-----SS------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------------------S--------------
---------------------------------------------------S------------
>forward_20
GTAAGCTGAAGCCACCGTCT------------------------------------------------------------
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>reverse_1717
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------------------------------------CTTCGGATCCAAGCAAACCA------------------------
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>forward_110
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----------CCTCGCAGTCAAGCCTAACA--------------------------------------------------
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>reverse_2093
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------------GTTCGCTTTTGTTCAAGTCACT----------------------------------------------
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----------------------------------------------------------------
