>input_sequence_69734
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--------------------------------------ATGGCTGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
GTGGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTCGCCAACTACATCCACTGGGACTATAC
GCAGGGCACCTACAAGCTGCAGAGCTACACGTATGAAT----CTGTTTCCGACTGATACACACAGTATATTCTACTAG--
--------------------------------------------------------------------------------
--------TAGCTAACCTCTGAG--------A----CGGGAAGATTTCTGATGTGGCAATGGCATG--GCATGGCGCACG
TA-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTCCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCGG---ACATCGTAAGTTGCT-----
-GCTGCTCTGGCTAGCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCCGATTCCCTTTGGTTAAGCACACCAAGCT----
--T------ATGATGATAGCCGCT---------------------------------ACGACGCGCAGGTGATCAGCATC
GTCCTGGCAAGCGGCGTTGGC----GCCGGGTTCGGTGCGACCAACGACGTTCTGCGCTACGTCCGGGCGAGCAAATGGG
AAGGCAGGCAGCAAGAGGAGCAGGCTCTCATCAATTACTACAACAGGGCGATCGTCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTCTCCATCTGCGCCACCGCCGTCTCCGCCAGGCTCCGCGCCAGGGCAATGAACGATGCTGAAGGTGGAGCCTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1B_1_TraesCS1B01G069700
GTGTAAAGTGTTTGAGTATGGACGCAGTGCAACACAGGGCAATTATACGAAGGGACCATGAGGTAGCCAAATAGATTACA
CATAAGCTGGCAGGCTAGATAGAGATCATGACGAGATAGTTCAACACCGGGACGGCCGAACCGACCATGACATATGGTTG
CAGATGTTGTGTCATGGCCTCGACGGGATTGTGGTCGCTGATACTATGTCAATTTAATACATGAGAATGATCGCATGTAG
TCATGACTCAGGAATTTAAGCATGCTGATGAACCTTATTATTTATTTTTCATACAGTAGAATCACAGATGCCCACATAGA
CGTACATACACTCATGCACGCGCACACACACATACATATCCCTATAAGCACCTTCGAAATACTATGATTGACGAGGTCAC
CACATGCGTCTAAGACTTGAATTCTGATGAGCTGGTTCCACCACAAGGAACCTAAACATTTGAGTTCGTGTTAATAAACC
TTATCACTAAATATATCGGTACCATGCCTCATGTTTGGTCCTCGATA-TCGACTATGCGCCTCGAATTATTTTTGTTGAT
GTGGCGATTTGATCTGTGGGCCGGTAGTAG-TCTAGTTGAGCAGT----GTTGGATGGAGAAAACGCCGGACGTGTAGCA
C-------------CGGTCGCGTTGTAGAGCTTCCTAGCAACATACATGTACCTTTCTTTGGCAGCTACGTGGAGAGCCA
GACCTTGCGGTGTCTGCGCCAGCTGCCGACCGGGGATGACCTCGACCGT-----------GAAATTGGTTCGCGCTTGCG
TCGGCGGACGTTGCGATGACAAGTGGCGCGGATAGGCAGCGTT--GTTGCATGCCCGGAGCTAAAATAAAGAC-AAGCTA
CAAACCACGCCCCGACGG-----CGGCCGTCTCTATGTTGGCGCGCCTGTC--------------TTCCGGTTAAAAAGG
CGGGCTCAAACC----AAGCTACAAGTA----CCGTAGGTATA----CGCTGACC-------GAGAGCACGAGCTAGGAG
CT-------AGATCGACAGCAGTTAGGATAGAGTAGAGATGGCTGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
GTGGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTCGCCAACTACATCCACTGGGACTATAC
GCAGGGCACCTACAAGCTGCAGAGCTACACGTATGAAT----CTGTTTCCGACTGATACACACAGTATATTCTACTAG--
--------------------------------------------------------------------------------
--------TAGCTAACCTCTGAG--------A----CGGGAAGATTTCTGATGTGGCAATGGCATG--GCATGGCGCACG
TA-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTCCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCGG---ACATCGTAAGTTGCT-----
-GCTGCTCTGGCTAGCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCCGATTCCCTTTGGTTAAGCACACCAAGCT----
--T------ATGATGATAGCCGCT---------------------------------ACGACGCGCAGGTGATCAGCATC
GTCCTGGCAAGCGGCGTTGGC----GCCGGGTTCGGTGCGACCAACGACGTTCTGCGCTACGTCCGGGCGAGCAAATGGG
AAGGCAGGCAGCAAGAGGAGCAGGCTCTCATCAATTACTACAACAGGGCGATCGTCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTCTCCATCTGCGCCACCGCCGTCTCCGCCAGGCTCCGCGCCAGGGCAATGAACGATGCTGAAGGTGGAGCCTG
ATCGGTCAGTTT-CACAC--AAAAACAAGGCGACTTCAGTTCATCCTTTCTACAATTGCCATATTCAGGCACTGCCAGCA
TG--GCGGTATGTTTGAAACAAGGTTTTGGTTACCGGTCGAAATTTCAAGATTTTCCATGGTTACCGCATATTTCCGCGC
C-ATCGATAAATCCTCATACCGAGCAAAAAATATCATTTTTTTGAAATTTTTGAATTTAAACGCTCCATTTGTAGTAAAG
TGCGTACGATCTAATTAATGCCATGAGAGTTGATTCTGACGT------AGCAACCTAGTTCCTGTTTTGACAGGTCTCTG
GTTCGAATGTTCGTTCATTCATTCAATTGAATTCAAAATTCAACTATAAAATTTGTTCGAAATATTCTCGGTATTCCCGG
TAACCGTGGTAACCACGTTTACCCGTCCTCCTGGGTAAAATTGCCTCATTATGTAACCAAAACCTTGGTTTGAAATGCAA
AATCTTTTCTTCCAATGGTTGAATTTCCACATTAAGGAATTATGAGACACTAGAAACGGGTCTTGCTATTTATTGATTCT
TTATTAGCTTGCAACTTTGCAGAGACCAATGATTATTCTCTCTGCTTTTCTTGTTGATCAACAGTCAGCTTGATCATATC
ATGAATCACTGAACTAACCGTGCCCGTGCACGTGGAGTCTGGTCGCCATGAGATCTCTTTGCCTTGTTAGCATGTTTTTT
TTT-GAAAATGAGAATTGCCCCCGGCCTCTGCATCTGAATGATGCATGCAACCATTTTATTAATTATTTGCAGACCTTAC
AAAGTAATACATTAAGTAGTCTGAAGCCACCATCTTAGCAACAACTGTCGCTACTCCTATCCACACCGACATCGCACCAA
GCCTAACATCTAAAGCCGGAGACCCCAATCAAGCCACATAGTGGGTTTGGGGTACATACCAGTCCGACACACTCTCATGT
GTCGTTGCCACCATCTTCCACGAATGCGTCTTCAGAGCAGTAACTAATTAATGC
>chr1B_1
GTGTAAAGTGTTTGAGTATGGACGCAGTGCAACACAGGGCAATTATATGAAGGGACCATGAGGTAGCCAAATAGATTACA
CATAAGCTGGCAGGCTAGATAGAGATCATGACGAGATAGTTCAACACCGGGACGGCCGGACCGACCATGACATATGGTTG
CAGATGTTGTGTCATGGCCTCGACGGGATTGTGGTCGCTGATACTATGTCAATTTAATACATGAGAATGATCGCATGTAG
TCATGACTCAGGAATTTAAGCATGCTGATGAACCTTATTATTTATTTTTCATACAGTAGAATCACAGATGCCCACATAGA
CGTACATACACTCATGCACGCGCACACACACATACATATCCCTATAAGCACCTTCGAAATACTATGATTGACGAGGTCAC
CACATGCGTCTAAGACTTGAATCCTGATGAGCTGGTTCCACCACAAGGAACCTAAACATTTGAGTTCGTGTTAATAAACC
TTCTCACTAAATATATCGGTACCATGCCTCATGTTTGGTCCTCGATA-TCGACTATGCGCCTCGAATTATTTTTGTTGAT
GTGGCGATTTGATCTGTGGGCCGGTAGTAG-TCTAGTTGAGCAGT----GTTGGATGGAGAAAACGCCGGACGTGTAGCA
C-------------CGGTCGCGTTGTAGAGCTTCCTAGCAACATACATGTACCTTTCTTTGGCAGCTACGTGGAGAGCCA
GACCTTGCGGTGTCTGCGCCAGCTGCCGACCGGGGATGACCTCGACCGT-----------GAAATTGGTTCGCGCTTGCG
TCGGCGGACGTTGCGATGACAAGTGGCGCGGATAGGCAGCGTT--GTTGCATGCCCGGAGCTAAAATAAAGAC-AAGCTA
CAAACCACGCCCCGACGG-----CAGCCGTCTCTATGTTGGCGCGTCTGTC--------------TTCCGGTTAAAAAGG
CGGGCTCAAACC----AAGCTACAAGTA----CCGTAGGTATA----CGCTGACC-------GAGAGCACGAGCTAGGAG
CT-------AGATCGACAGCAGTTAGGATAGAGTAGAGATGGCTGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
GTGGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTCGCCAACTACATCCACTGGGACTATAC
GCAGGGCACCTACAAGCTGCAGAGCTACACGTATGAAT----CTGTTTCCGACTGATACACACAGTATATTCTACTAG--
--------------------------------------------------------------------------------
--------TAGCTAACCTCTGAG--------A----CGGGAAGATTTCTGATGTGGCAATGGCATG--GCATGGCGCACG
TA-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTCCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCGG---ACATCGTAAGTTGCT-----
-GCTGCTCTGGCTAGCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCCGATTCCCTTTGGTTAAGCACACCAAGCT----
--T------ATGATGATAGCCGCT---------------------------------ACGACGCGCAGGTGATCAGCATC
GTCCTGGCAAGCGGCGTTGGC----GCCGGGTTCGGTGCGACCAACGACGTTCTGCGCTACGTCCGGGCGAGCAAATGGG
AAGGCAGGCAGCAAGAGGAGCAGGCTCTCATCAATTACTACAACAGGGCGATCGTCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTCTCCATCTGCGCCACCGCCGTCTCCGCCAGGCTCCGCGCCAGGGCAATGAACGATGCTGAAGGTGGAGCCTG
ATCGGTCAGTTT-CACAC--AAAAACAAGGCGACTTCAGTTCATCCTTTGTACTATTGCCATATTCAGGCACTGCCAGCA
TG--GCGGTATGTTTGAAACAAGGTTTTGGTTACCGGTCGAAATTTCAAGATTTTCCATGGTTACCGCATATTTCCGCGC
CCATCGATAAATCCTCATACCGAGTAAAAAATATCATTTTTTTGAAATTTTTGAATTTAAACGCTCCATTTGTAGTAAAG
TGCGTACGATCTAATTAATGCCATGAGAGTTGATTCTGACGTGTTCGTAGCAACCTAGTTCCTGTTTTGACAGGTCTCTG
GTTCGAATGTTCGTTCATTCATTCAATTGAATTCAAAATTCAACTATAAAATTTGTTCGAAATATTCTCGGTATTCCCGG
TAACCGTGGTAACCACGTTTACCCGTCCTCCTGGGTAAAATTGCCTCATTCTGTAACCAAAACCTTGGTTTGAAATGCAA
AATCTTTTCTTCCAATGGTTGAATTTCCACATTAAGGAATTATGAGACACTAGAAACGGGTCTTGCTATTTATTGATTCT
TTATTAGCTTGCAACTTTGCAGAGACCAATGATTATTCTCTCTGCTTTTCTTGTTGATCAACAGTCAGCTTGATCATATC
ATGAATCACTGAACTAACCGTGCCCGTGCACGTGGAGTCTGGTCGCCATGAGATCTCTTTGCCTTGTTAGCATGTTTTTT
TTTTGAAAATGAGGATTGCCCCCGGCCTCTGCATCTGAACGATGCATGCAACCATTTTATTAATTATTTGTAGACCTTAC
AAAGTAATACATTAAGTAGTCTGAAGCCACCATCTTAGCAACAACTGTCGCTACTCCTATCCACACCGACATCGCACCAA
GCCTAACATCTAAAGCCGGAGACCCCAATCAAGCCACATACTGGGTTTGGGGTACATACCAGTCCGACACACTCTCATGT
GTCGTTGCCATCATCTTCCACGAATCCGTCTTCAGAGCAGTAACTAATTAATGC
>chr1A_512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TGTTTGATCCTTGATAGTCGACTATGCGGCTCGATTTATTCTCGTTGAT
GTAGCAATTTGATCTGTGGG----TAGTTGATCTAGTTGAGCACAGCACGTTGGATGAAAAAAGCGTCGGACGTGTAGCA
TTGCTCTTGTGCCACGGTCGCGCTGTAGAGCTTCCTAGCAACATACATGTAGCTTTCTTTGGCAGCTACGTACAGAGCAA
GACCTTGCGGTGT--------------------------CCGCGTCCGT-----------GAAATTGCTGCGCGCTTGCG
TTGGCGGACATTTCGGTGACAAATGGCGCGGATAGGCAGCTGTGCA-TACATACCCGAAGCGAAAAT-AAGAC-AAGCTA
CAAACCACGCCCCGACGG-----CGGCCGTCTCT--GTC--------------------------TTC----------GG
CCGGCTCAAACC----AAGCTACAAGTAAGTTCCCTAGCTATAAGTTC-------------------------------G
CCGATCGAGAGCACGAGAGCAATCAGGATC-----GAGATGGCGGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
CTGGCGCGGCTGCTCATGATGGCCGTCCTGCTCATGGCCGTGCGCTTCGTTCTTGCCAACTACATCCAGTGGGACTATAC
ACAAGACCCCTACAAGCTCCAGAGCTACACGTATGTACTCCTCTGTCTCCAAT-----------GTAG------------
--------------------------CACTATATTCTATCTCCCT-----------------------------------
---------------CCTTTGAGAAGTATATA----CGGAACGATTTCTGATGTGGCATG----TG--GCATGGCGCGCG
TG-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGACGGCGGGGGGCATGCTGCAGATACCCGTCGCCATGTACCTACTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATCATCCTCGACATCAGCATGCACGCCG---ACATAGTGAGTTGCTAC---
-------------------CTACCGTAATTTCTCGTGCAAAAGCTCCTGATTCCCTTTGGTGAATGGTTAT--GGT----
--T------ATGACAATTGCCGCT---------------------------------ACGACGCGCAGGTGATCAGCGTC
GTGCTGGCAAGCGGCGTCGGT----GCCGGGTTCGGCGCGACCAACGACGTTCTGCGCTACGTCCGGGTGACCACATGGG
AAGGCGGGCAGCAAGCGGAGCAGGCTCTCATCAACTACTACAACAGGGCGATCGTCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTCTCCATCTGCGCCACCGTCGCCTCCGCCAGGCTCCGCGCCAGGGCGACAAACGATTCTCAAGGTGGTGCCTG
ATCGATCAATTC-CACAC--AAGACCAAGATGACCTCAGTTCAACCTTTGTA---TTGCCATATTCAGGCACT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1D_514
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TTTGATCCTTGATACTCCACTATGCGCCTCAATTTATTCTCGTTGAT
TTAGCGATTTGATCTGTGGG----TAGTTG-TCTAGTTGAGCAGT----GTTGGATGAAAAAAACATCGGACGTGTAGCA
TTGCTATTGTGCCACGGTCCAACTTTAGAGCTTCGTAGCAACATACATGTACCTTCCTTTGGCAGCTACGCACAGAGGCA
GACCTTGCGGTGT--------------------------CCTCGTCAGCTGCCGACCTGGGAAATTGCTGCGCGCTTGCG
TCGGCGGACACTTCCACGACAAATGGCGCGGATAGGCAGCGTTTCGTTGCGTGCCCGGAGCTAAAATGAGGACAAAGCTA
CAAACCACGCCCCGACGG-----CGGCCGTCTCT--GTCCGCGCGTCTGTGTTGGTACTTGGTAGTTG----------GG
CCGTCTCAAACC----AAGCTACAAGTA----CCTTAGCTATA----CGCTGATC-------GAGAGCAGGAGCTAGGAG
CT-------AGATCGGCAGCAGCTAGGATC-----GAGATGGCCGTGTCACGGCAGACAGGGTGGATCGCCGCTGGCCTC
CTCGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTGTCCAACTACATCCACTGGGACCATAC
ACAGGGCATCTACAAGCTCCAGAGCTACACGTATGTATTCCTCTGTATCCGAT-----------GTATATTCTAGTTCTA
GC-TAAGCCAGCGCGTTGTATTACTGTACTAGTGTTACT-------AGTACTACATACTGCGTCGCTAGCTC--------
--------TAGCTAACCTCTGAG--------A----CGGGACGAGTTCTGATGTGGCATGGCAATG--GCATGGCGAACG
TA-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGGCGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTGCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCCG---ACATAGTAAGCTGCT-----
-GCTCTG-------GCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCCGATTTCCTTCGGCTAAGTAGAACAAGGT----
--T------ATGATGATTGCCGCT---------------------------------ACAACGCGCAGGTGATAAGCGTC
GTGCTGGCAAGCGGGGTCGGCGGCGGCCGGGTTTGGCGCGACCAACGACGTTCTGCGCTACGTCCGGGCGAGCAAATGGG
AAGGCAGGCAGCAAGAGGAGCAGGCTCTCATTAACTACTACAACAGGGCGATCGTCCCAGTCGTGTTCCTCCTCGTGGGC
ATGGTCCTCTCCATCTGCGCCACCGTCGTCTCCGCCAGGCTCCGCGCCAGGGCGATAAATGATTCTGAAGTTGGAGCCTG
ATCCATCAATTT-CACAC--AAAAACAAGGCGACTTCAGTTCATCCATTGTA---TTGCCATATTCAGGCACTGCCAGCA
TG--GCGCTATG--------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1D_636
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------CGGTCGCGCTGTAGAGCTTCCTAGCAACATATATGTAGCTTTCTTTGGCAGCTACGTACAGAGCAA
GACCTTGCGGTGT--------------------------CCGCGTCCGT-----------GAAATTGCTGCGCCCTTGCG
TCGGCGGACATTTCGGTGACAAATGGCGCGGATAGGCAGCTGTGCA-TACATACCCGAAGCGAAAAT-AAGAC-AAGCTA
CAAACCACGCCCCGACGG-----CGGCCGTCTCT--GTCCGCGCGTCTGTC--------------TTC----------GG
CCGGCTCAAACC----AAGCTACAAGTAAGTACCGTAGCTATAAGTGCGCCGATC-------GAGAGCACGAG-------
---------------AGAGCAATCTGGATC-----GAGATGGCGGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
CTGGCGCGGCTGCTCATGATGGCCGTCCTGCTCATGGCCGTGCGCTTCGTTCTTGCCAACTACATCCAGTGGGACTATAC
ACAAGACCCCTACAAGCTCCAGAGCTACACGTATGTACTCATCTGTCTCCAAT-----------GTAG------------
--------------------------CACCATATCCTA-CTCTCT-----------------------------------
---------------CCTCTGAGAGGTATATA----CGGAACGATTTCTGATG------TGGCATG--GCATGGCGCGCG
TG-CAGGTACGTGGTCGTGTCGGCCGTCGTGGGGACGGCGGGGAGCATGTTGCAGATACCCGTCGCCATGTACCTGCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATCATCCTCGACATCAGCATGCACGCCG---ACATAGTGAGTTGCTACGTA
--------------------TACCGTCATTTCTCGTGCAAAAGCTCCTGATTCCCTTTGG-------TTAT--GGT----
--T------ATGACAATTGCCGCT---------------------------------ACGACGCGCAGGTGATCAGCGTC
GTGCTGGCAAGCGGCGTCGGC----GCCGGGTTCGGCGCGACCAACGACGTTCTGCGCTACGTCCGGGTGACCACATGGG
AAGGCGGGCAGCAAGCGGAGCAGGCTCTCATCAACTACTACAACAGGGCGATCGTCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTGTCCATCTGCGCCACCGTCGTCTCCGCCAGGCTCCGCGCCAGGGCGACAAACGATTCTCAAGGTGGTGCCTG
ATCGATCAATTC-CACAC--AAAACCAAGATGACCTCAGTTCATCCTTTGTA---TTGCCATATTCAGGCACTGC--GCA
TG--GCGCTATGTCTGA---------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1D_739
GACCC---------------------------------------------------------------------------
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-------------------------------------------GAGCGT-----------GAATTTGCTGTGAGCTTGCG
TCGGCGGACGTTTCGATGACAAATGGCGTGGATAGGCAGCGTTGCA-TGG----CCGGAGCTAAAATAAAGACAAAGCTA
CAAACCACGCCCCGACGGGACGGCGGCCGTCTCT--GTTTGCGCGTCTGCC--------------TTG----------GG
CCGGCTCAAACCAATTAAGCTACAAGTA----CCGTAGCCATA----CGCCGATGGAGACTGGAGAGCACGAGCTAGGAG
CTGATCGATCGATCGAGAGCAATTAGGATC-----GAGATGGCGGTGTCACGGTGGACGGGGTTTATCGCCGCCGGCCTC
CTGGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTGGCCAACTACATCCATTGGGACCATAC
ACAGGGCATCTACAAGCTCCAGAGCTACACGTATGTACC---CTGTATCCGAT-----------TTATATTCTAGTTCTA
GC-TAAGCCAGCGCGTAGTACTAATGTACTAGCTAGTGTAC-------TACCACGTACTGCGTCGCTAGCTC--------
--------TAGCTAACCTCTGAG--------A----TGGGACGAGTTCTGATGTGGCATGGCAGTG--GCATGGCGCACG
TA-CAGTTATGTGGTCGCGTCGGCCGTCGTGGGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTGTTGT
GCAAGAGCAAAAGGGCGATAACCAGCGCCATCATCCTCGACATCAGCATGCGCGCCG---ACATAGTAAGCTGCT-----
-GCTCTG-------GCTATGC----------------------CTCCTGATTCCCTTTGG-------TCAA--GTT----
--C------ATGCCAACGATTCGTAGACAGGGTTATGAGCTTATGATGCTTGCT--------GCGCAGGCGATCAGCGTC
GTGCTGGCAAGCGGCGTCGGC----GCCGGGTTCGGCGCGACCAACGACGTTCTTCGCTACGTCCGGGCGGGCGAATGGG
ACGGCAGGCAGGAAGACAAGCTGGCTCTCGTCAACTACTTGAACA-GGCGATCATCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTGTCCAACTGCGCCACCGTCGTCTCTGCCAGGCTCTGCGCCAGGGCGACAAACGATTCTGAAGGTGGTGTCTG
ATCGATCAACTC-CACAGAAAAAAACAAGGTGACTTCA------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1A_744
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------CGACCGT-----------GAACTTGCTGTGAGCTTGCG
TCGGAGGACGTTTCGATGACAAATGGCGTGGATAGGCAGCGTTGCGTTGCATGCCCGGAGCTAAAATAAAGACAAAGCTA
CAAACCACGCCCCGACGGGACGGCGGCCGTCTGT--GTTTGCGCGTCTGTC--------------TTG----------GG
CCGGCTCAAACCAATTAAGCTACAAGTA----CCGTAGCCATA----CGCCGATGGAGACTGGAGAGCACGAGCTAGGAG
CTGATCGATCGATTGAGATCAATTAGGATC-----GAGATGGCGGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
CTGGCGCGGCTGCTCATGATGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTGGCCAACTACATCCATTGGGACCATAC
ACAGGGCGTCTACAAGCTTCAGAGCTACACGTATGT-CTCCTCTGCATCCGAT-----------GTAA------------
--------------------------TACTAGTGTCTA-GTGCTCTCC-------TACTGCGTCGCTAGCTCTTTGAGCG
GCTAGCTTTAGCTAACCTCTGAG--------A----CGGGACGATTTCTG-TG------TGGCATG--GCATGGCGCACG
TACCAGTTATGTGGTCGCGTCCGCCGTCGTGGGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATATACCTGCTGT
GCAAGAGCAAAAGGGCAATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCCA---ACATAGTAAGCTGCT-----
-GCTCTG-------GCTATGGCTCATAT-------------------CGATTCCCTTTGG-------TCAA--GTT----
--C------ATGCCAACGATTCCTAGACAAGGTTATGAACTTATGATGCTTGGT--------GCGCAGGCGATCAGCCTC
GTGCTGGCAAGCGGGGTCGGC----GCCGGGTTCGGCGCGACCAACGACGTTATGCGCTACGTCCGGGCGGGCGAATGGG
ACGGCAGGCAGGAAGAGAAGCAGGCTATCGTCAACTACTTGAACAGGGCGATCATCCCCGTCGTGTTCCTCCTCGTAGGC
ATGGTCCTGTCCATCTGCGCCACCGTCGTCTCCGCCAGGCTCCGCGCCAGGGCGACAAACGATTCTGAAGGTGGTGTCTG
ATCGACCAACAC-CACAC--AAAAACAACGCAACTTCA------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_906
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AGG
CCGGCTCAAACC----AAGCTACAAGTA----CCTTAGCTATA----CTCTCATC-------GGGAGCAGGAGCTAGGAG
CT-------AGATCGGCAGCAGCTAGGATC-----GAGATGGCCGTGTCACGGCGGACGGGGTGGATCGCCGCCGGCCTC
CTCGCGCGCCTGCTCATGGTGGCCGTCCTGCTCATGTCCGTGCGCTTCGTTCTGTCCAACTACATCCATTGGGACCATAC
ACAGGGCATCTACAAGCTCCAGAGCTACACGTATGTACTCCTCTATATCCGAT-----------GTATATTCTAGTTCTA
GCTTAAGCCAGCGCGTAGTACTACTGTACTAGTGTTACT-------AGTACTACATACTGCGTCGCTAGCTC--------
--------TAGCTAACCTCTGAA--------AAGCACGGGACGAGTTCTGATGTGGCAT-----TG--GCATGGCGCACG
TA-CAGTTATGTGGTCGCGTCGGCCGTCGTGGGGGCGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTGCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCCG---ACATAGTAAGTTGCTGCTCT
GGCTATG-------GCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCTGACCCCCTTTGG-------TTAA--GTA----
--CTCCTATATGCGAACGACTCGTGGACATGGTTATGATAATTTCATCTTGCATGCCACTGCGCGCAGGTGATCAGCGTC
GTGCTGGCAAGCGGCGTCGGC----GCCGGGTTCGGCGCGACCAACGACGTTCTGCGCTACGTCCGGGCGAGCAAATGGG
AAGGCAGGCAGCAAGAGTAGCAGGCTCTCATCAACTACTACAACAGGGCGATCATCCCCGTCATATTCCTACTCGTAGGC
ATGGTCCTCTCCATCTGCGCCACCGTCGTCTCCGCCAGGCTCCGCGCTAGGGTCATAAACGATTCTGAAGGTAGAGCCTG
ATGGATAAACTCTCACAC--AAAAACAAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1A_960
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------GAGCTAGGAG
CT-------AGATCGGCAGCAGCTAGGATC-----GAGATGGCCGTGTCACGGCGCACAGGGTGGATCGCCGCCGGCCTC
CTGGCACGCCTGCTCATGGTGGCCGTCCTGCTCATGTCGGTGCGCTTCGTTCTGTCCAACTACATCCATTGGGACCATAA
ACAGGGAATCTACAAGCTCCAGAGCTACACGTATGTACTCCTCTATATCCGAT-----------GTATATTCTAGTTCTA
GC-TAAGCCAGCGCGTAGTACTACTGTACTAGTGTTACTACTTACTAGTACTACATACTGCGTCGCTAGCTC--------
--------TAGCTAACCTCTGAG--------AAGCACTGGACGAGTTCTGATGTGGCATAGCAATG--GCATGGCGCACG
TA-CAGGTATGTGGTCGCGTCGGCCGTCGTGGGGGCGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTGCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATGATCCTCGACATCAGCATGCACGCCGCCGACATAGTAAGTTACTGCTCT
GGCTATG-------GCTAGCTACCTTAATTTCTCGTGCAAA-GCTCCTGATCCCCTTTGG-------ATAA--GTACTCG
TAC------ATGCCAACGACTCGTGGACATGGTTATGATAATTTCATCTTGCATGCCACTACGCGCAGGTGATCAGCGTC
GTGCTGGCAAGCGGCGTCAGC----GCCGGGTTGGGCGCGACCAACGACGTTATGCGCTACATCCGGGCGAGCAAGTGGG
AAGGCAGGCAGCAAGAGAAGCAGGCTCTCATCAACTACTACAACAAGGCGATCATCTCCGTCGTGTTCCTCCTTGTAGGC
ATGGTCCTTTCCATCTGTGCCACCATCGTCTCCGCCAGGCTCCGCGCTAGGGCCATGAATGATTCTGAAGGTGGAGCCTG
ATCGATCAATTT-CACAC--AAAAACAAGTTGGA-----TTCATCCTTTGTA---TTGCCCTATTCAGGCACTATCAGCA
TGTGGCGCTATGT-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1D_1197
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------TAGCTAACCTCTGAG--------A----CGGGACGGTTTCTGATGTGGCATGGCATGGGCGCATGGCGCACG
TA-CAGGTACGTGGTCGCGTCGGCCATCGT-GGGACGGCGGGGAGCGTGCTGCAGATACCCGTCGCCATGTACCTGCTGT
GCAAGAGCAAAAGGGCGATACCCAGCGCCATAATCCTCGACATCAGCATGCACGCTG---ACATAGTAAGCTGCTGCTCT
GGCTATG-------GCTA----------------------------CTGATTCCCTTTGG-------TCAA--GTT----
--C------ATGCCAACGATTCCTAGACAAGGTTATCAACTTATGATGCTTGCT--------GCGCAGGCGATCAGCGTC
GTGCTGGCAAGCGGCGTCGGC----GCCGGGTTCGGCGCGACCAACGACGTTCTTCGCTACGTCCGGGCGGGTGAATGGG
ACGGCAGGCAGGAAGACAAGCGGGCTCTCGTCAACTACTTGAACAGGGCGATCGTCCCCGTCGTCTTCCTCCTCGTAGGC
ATGGTCCTGTCCATCTGCGCCACCGTCGTCTCCGCCAGGCTCCGCGCCGTGGCGACAAACGATTCTGAAGGTGGTGTCTG
ATCGACCAACAC-CACAC--AAAAACAACACGACTTCA------------------------------------------
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>SNPs
-----------------------------------------------S--------------------------------
----------------------------------------------------------S---------------------
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----------------------S---------------------------------------------------------
--S-----------------------------------------------------------------------------
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---------------------------------------------S----------------------------------
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-------------------------------------------------S---S--------------------------
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------------------------S-------------------------------------------------------
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--------------------------------------------------S-----------------------------
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-------------S-------------------------S------------------------------S---------
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----------------------------------------S---------------------------------------
----------S--------------S----------------------------
>forward_926
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---------------------------CGTCTCTATGTTGGCGCGC----------------------------------
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>reverse_2921
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----------------------------------------GTGGGTTTGGGGTACATACCA-------------------
------------------------------------------------------
