>input_sequence_69656
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------------------------------------ATGGAGCCGAGCATGGCGCCGCGGAGGCTATGGCACGTGGTGCG
CGCCGTGCTGTTCATGCTCCGCAAGGGCATGTCCAAGCGGAAGTTGTCCATGGACCTCCAGCTCCTCCTCCACCGCGGCA
AGATCGCCGGCAAGGCCCTCAGCCGACTCATGAGCGCCAACGGCCACCATGACCAGGCCGCCTCCAGGTCAGCCGCGGAG
GCACCTCCGCCGGCGTCGTTGTCGCGTCGCACCCTCGACCCCGCGCTCGCCGTTTACGGCCCGCGCGGCGCCGGCCGCGA
GGTGGAGTTCAGCTGCAGCAACACCCCGTCCTACCCGCCCATCCAACTCATCCCCGCCAAGCGCCGCCGCCGCAACAACC
GCCGCACCCACCGCGGCGCCAACGGCGCGGAGCCAGGGTGGTACAACTACGACGCGGCGGACATTGCCAAGGTCTTCGAG
GTCCTCAACGACGAGCAGCTGCTGAAGGAGGTCGTCGGCGACGACGGTGCGGCGCCCCTCGCCGTGGTGGCGACGCCGTC
CCCCGCGCTTTGGTCGAGCTTCGGCCGCAGCCCGGCGCCGGTGAGGCAGCTGCGGATCACCGACTCGCCGTTCCCGGTGA
GGGACGACGCGGCGGATCTGGAGGGCGCGCTGGTGGACCGCGAGGCGGACGAGTTCATCAAGAAGTTCTACGACCAGCTG
CGCAGGCAGCAGAACCTCGCCGCCGCCACCCCGGAGTACGGCTACGCGGGTCCGGCTGCCGGCGTCGCGTACTAG-----
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>chr7B_1_TraesCS7B01G271800
TAGAGGAAGGACCCCGACAAATCAGCCCTCCGGGGGAGAAAAGCTCACCTCTATGTTAAAGATGGCTGAAAAAAATCCTC
--------ATTCCTATCAGTTTTAGGGTAAAATGGGACAAGTGCTGCCATGCAACATTAGAGGCATGCCATGTGAGCCCC
ACATGCCCCCTTTGCGTGACCAGGGTGCGTGGGCCCCACAGGAGGCCTCCTGGCCCAAGTATGGCCCCGTGGCTCTCTTC
TCGTAGAAAACTGACATTATGAATTTTTGCTATTTTTTCGAGTTCCAAAAAGTCATTTTCTCCATCGGATTGCATTTTGG
TGCTTTTCTGCAA-TTTTTCGCCAATTG-CCCTCCTCCGTTGCTACATGCAAATTAAGAGGAAAAAGAATAAGAATGA-T
GTGATAAATGCAAAACATGAATAATTATAAGCATTTTATAATAAGATATAGTGGTGCAAAATGGATGTATCAGGTTTTGA
CTATGTCGTCTTGGCTGTCCAAGTAGAAGACGCCCCAGTTCTTGGCTATCTGTAGTCT-----------GCCCCCTTAGT
ATGAACCCTCGCGACCTTGATCTCCTACTCATGGGTGACCTGAACTTGTCCTAAACTTGATCTTATA-------------
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----------------------------------------TAATTTTTATGTGTGCATCTACAATGTTAACATAGGTTAT
CGAAAAAAGATTGTGGTTCATAGGCCTATTGGGGTGCGACGAACAGGTCTAAGTGACTCTGTTTTGACACGAGTGAGTGA
GGAATCCAAGCGACCCGTTCTTGTACTACAAGCGGCAGCTTGCAGCAAGCACTGCAGCCAAAAGCAATCGCAAACACGAA
GCTCCCACCACTGACTAAAATATCATAAAATAAACCCCATTAGCCATTTCTGTTCCATTATTACCTCCCTTTAAATACCC
CCTCCACTCCACCCTCCTCTACTCGTGCTAAAACCCCACAGCAGCAAAGCATTCCCAACGAAGACAAG-AATCCTCTCTC
ACTCACTCCTCAGTCAGTCCTTCCACACAGAGAGCGATGGAGCCGAGCATGGCGCCGCGGAGGCTATGGCACGTGGTGCG
CGCCGTGCTGTTCATGCTCCGCAAGGGCATGTCCAAGCGGAAGTTGTCCATGGACCTCCAGCTCCTCCTCCACCGCGGCA
AGATCGCCGGCAAGGCCCTCAGCCGACTCATGAGCGCCAACGGCCACCATGACCAGGCCGCCTCCAGGTCAGCCGCGGAG
GCACCTCCGCCGGCGTCGTTGTCGCGTCGCACCCTCGACCCCGCGCTCGCCGTTTACGGCCCGCGCGGCGCCGGCCGCGA
GGTGGAGTTCAGCTGCAGCAACACCCCGTCCTACCCGCCCATCCAACTCATCCCCGCCAAGCGCCGCCGCCGCAACAACC
GCCGCACCCACCGCGGCGCCAACGGCGCGGAGCCAGGGTGGTACAACTACGACGCGGCGGACATTGCCAAGGTCTTCGAG
GTCCTCAACGACGAGCAGCTGCTGAAGGAGGTCGTCGGCGACGACGGTGCGGCGCCCCTCGCCGTGGTGGCGACGCCGTC
CCCCGCGCTTTGGTCGAGCTTCGGCCGCAGCCCGGCGCCGGTGAGGCAGCTGCGGATCACCGACTCGCCGTTCCCGGTGA
GGGACGACGCGGCGGATCTGGAGGGCGCGCTGGTGGACCGCGAGGCGGACGAGTTCATCAAGAAGTTCTACGACCAGCTG
CGCAGGCAGCAGAACCTCGCCGCCGCCACCCCGGAGTACGGCTACGCGGGTCCGGCTGCCGGCGTCGCGTACTAGGAGCT
TATATTAGCTGCCTACGTGCCGATCAAAGCTTCCC----TA-------TAGGTGTTAGCTACTTCCCGCATGCATGTC--
-TTTTGTTCCAAGTGTGAAGTGTGAACCTACTTTGGCTCCAGTACATATGTGTTTGTGATCTTGTGCATAGATCAAGCAT
ATGTTTGTACGTAGAGAGCTTAATTACAGTACTG-CTCTAATAAGTTTCTTGGACCT----GTGAGATTTTTC-GTGTTT
AATCAGTTAGAT---CCATGCATGTGTGTTAATTACTGGTTCACGACTACTACTAGTAGGTAACAAGATCGCACACCTTA
GTCCGACTACTACTGGTTCACGACTACTACCAGTCCGGCGCACTCCTCAACCAGGACACCTGCCGGATATGAGGCCGCCG
CAGCCACCTACCACCAATCCATCTTCAGAGTTGTGTTGCATGTATCGTGTCAGGTCTCTTTGCCATCGACGCCACCACAA
CGCCCGACAACGTCGTCCTCCTGCGCGAGTTCATCCTCCCACAGCGAACTTCGAATCTGCACTGCGCCACGCCGTCAAGA
TCCGTTGCCATCAGTGTGTAGGATGAAGCACCGCTTCACCAAAGAATCTGTCCTCTGATCCCTCGATCACGTGTGTACCT
CCAAAAATGACACAGTGGCCATGTATATGCGCTGTGTATGATAGACTAGCCGATCGAGCTTGTGGCTTTGTGCTTGTGAT
TGATCGAATTCAAACAAGGGTGTATCAGTGCTTCAGTCAGAATGTTCGTAGCTGATTTTGTTGTCGCACACCTCGGTGCC
AGTACCAGTACCACAACACAGCGACAGTAGTAGTAGAGCAACTTTCCAGAATTTCTTCAGTTGTT---TCGTCTTGTCCT
TGGCTACAGTGGATTCACGTATTGGTTCTGGAGAATCGATCGACCTGTCAAACATCGGAGGATATCTGATATATCAATCT
CAGTTAATTGTTTTGGACA--AGTATAGTACACTGCTTAGCTTCCAGTGAGATCGATAGATGT
>chr7D_1
TAGAGGAAGGATCCCGACAAATCAGCCCTCTGGGGGAGAAAAGCTCACCTCTATGTTAAAGATGGCGGAAAAAAAATCCT
CGATAATTATTTCTGTCAGTTTTAGGGTAAAATGGGATCAGTGCAGCCATGCAACATTAGAGGCATGCCATGTGAGCCCC
ACATGCCCCCTTGGCATGACCAGGGCGCGTGGGCCCCATAGGGGGCCTCCTGGCCCAAGTATGGCCCCGTGGCTCTCTTC
CCGTATAAAACTGACATTCTAAATTTTTGCTATTTTTACGAGTTCCAAAAAGTCATTTTCTCCACCGGATTTCATTTTGG
TGCTTTTCTGCAA-TTTTTCGCAAATTG-CCCTCCTCCGTTGCAACATGCAAATTAAGAGGAAAAAGAATAAGAATGA-T
GTGACAAATGCAAAACATGAATAATTGTGAGCATTTTATAATAAGATATAGTGGTGCAAAATGGATGTATCAGGTTTCGA
CTATGTCGTCTTGGTTGTCCAAGTAGAAGATGCCCCAGTTCCGAGCTATCTGTAGTCT-----------GCCCTCTTAGT
ATGAACCCTCGCGACCTTGATCTCCTACTCATGGATGACCTTAACTTGTCCTAAACTTGATCTTATA-------------
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----------------------------------------TAATTTTTATGTGTGCATCTACAATGTTAACATAGGTTAT
CGAAAAAAGATTGTGGTCCATTGGCCTATTGGGGTGCGACGAACAGGTCTAAGTGACTCTGTTTTGACACGAGTGAGTGA
GGAATCCAAGTGAACCGTTCTTGTACTACAAGCGGCAGCTTG-AGCAAGCACTGCAGCCAAAAGCAATCGCAAACACGAA
GCTCCCACCACTGACTAAAATATCATAAAATAAACCCCATTAGCCATTTCTGTTCCATTATTACCTCCCTTTAAATACCC
CCTCCACTCCACCCTCCCCTACTCGTGCTAAAACCCCACAGCAGCAAAGCATTCCCAACGAAGACAAACAATCCTCTCTC
ACTCGCTCCTCAC----TCCTTCCACACAGACAGCGATGGAGCCGAGCATGGCGCCGCGGAGGCTATGGCACGTGGTGCG
CGCCGTGCTGTTCATGCTCCGCAAGGGCATGTCCAAGCGGAAGCTGTCCATGGACCTCCAGCTCCTCCTCCACCGCGGCA
AGATCGCCGGCAAGGCCCTCAGCAGACTCATGAGCGCCAACGGCCACCACGACCAGGCTGCCTCCAGGTCAGCCGCGGAG
GCACCTCCGCCGGCGTCCTTGTCGCGCCGCACCCTCGACTCCGCGCTCGCCGTCTACGGCACGCGCGGCGCCGGCCGCGA
GGTGGAGTTCAGCTGCAGCAACACCCCGTCCTACCCGCCCATCCAGCTCATCCCCGCCAAGCGCCGCCGCCGCAACAACC
GCCGCACCCACCGCGGCGCCAACGGCGCGGAGCCAGGGTGGTACAACTACGACGCGGCCGACATTGCCAAGGTCTTCGAG
GTCCTCAACGACGAGCAGCTGCTGAAGGAGGTCGTCGGCGACGACGGTGCGGCGCCCCTCGCCGTGTTGGCGACGCCGTC
GCCCGCGCTGTGGTCGAGCTTCGGCCGCAGCCCGGCGCCGGTGAGGCAGCTGCGGATCACCGACTCGCCGTTCCCGGTGA
GGGACGACGCGGCGGATCTGGAGGGCGGGCTGGTGGACCGCGAGGCGGACGAGTTCATCAAGAAGTTCTACGACCAGCTG
CGCAGGCAGCAGAACCTCGCCGCCGCCACCCCGGAGTACGGCTACGCGGGTCCGGCTGCCGGCGTCGCGTACTAGGAGCT
T-----AGCTGCGTACGTGCCAACCAAAGCGTCCA----TATAAGTATTAGGTGTTAGCTACTTCCTGCATGCATGTG--
-TTTCGTTCCAAGTGTGAAGCGTGAA----CCT--GCTCCAGTACGTATATGTTTGTGATCTTGTGCATAGATCAAGC--
ATGTTTGTATGTAGAGAGCTTAATTAATTACAGTACTCTAATAAGTTTCTTGGAGCT----GTGAGATTTTTCTGTGTTT
AATTAGTTTGATGATCCATGCATGTA-----TATATTACTAGTTCACGACTGCTAGTAGGTAACAAGATTCACACCTTCC
GATGTATATGTAT-------------------------------------------------------------------
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--ATCGAATGCAAACAAGGATGGCTCTCAGTGATTCA------GTCCGTAACTGGTTTTGTTGTCGTACACGTCGGTG--
----CCAGTACCACAACACAGCGACAG---TAGTAGAGCAACTTTCCAGAATTTCTTCAGTTGCTCGATCGTCTTGTCTT
TGGCCACAGGGGATTCGCGTATTGGTTCCGGAGAATCGATCGGCCTGTCAAACATCGGAGGATATCTGATATCTCAATCT
CACTTGATTGTGTTTTGGACCAGTACAGTACACTGCTTACCTTCCATTGAGATCGATAG----
>chr7A_1
TAGAGGAAGGATCCCGATAAATCAGCCTTTGGGGAGAGAAAAGCTCACCTCTCTGTTAAAGATGGTGGC-AAAAAATCCT
CGATAAATATTTCTGTCAGTTTTAGGGTAAAATGGGAACGGTGCTTCCATGCAACATTAGAGACATGGCATGTGGGCCCC
ACATGCCCTCTTGGCGTGGCCAGCGCGTGTGGGCCCCACAAGGGGCCTCCTGGCCCAAGTCTGGCTCCGTGGCTCTCTTC
CCATATAAAATTGGCATTCTAAATTTT-GCTATTTTTCTGATTTAT------TCATTTTCTCCAACGGATTTCATTTTGG
TGCCTTTTTGCAATTTTTTGGCCAGTTGCCCTTCCTCCGTTGCGACAAGCAAATTAAGAGCAAAAAGATATAATAACGGT
GTGATAAATGCAAAACATGAATAATTATGAGCATTTTATAATAAGATATAGTAGTGCAAAATTGACGTATCATTTTTCGA
CGTTGTCGTCTTAGTTGTCCAAGTAGAAGATGCCCCAGTTCCTTGTGTCCTCGGGCTATTTGCTGCCCGGCCCCCTTAGT
ATGAACCCTCACGACCTTGATCTCCTGCTAATGGATGACCTGAACTTCTCCTAAACTTGATCTTATAGTTGTGGATTACT
CGGGCTCCCCCATATTTTGTGGGCAGCCACTTTCCTCCTAAGAGTGTTAGGGTAGAGCCCATTTTAGGCGTCCTTCCAAA
TGAGGAAAGGCCATATGTGGTAGCTAGAACGGGGTCCGAATGACTTCATTTCAAGTCTGCATGGTGCGTATGGGAGAGTT
TTTGCCTCCCATTGTCAGTCTCCTCTTTCTGCTTCTTCGACTTCTTTGCCGACACTTTCACCTCTTAGTTCACTAATGTT
GGCGGTTGGCGTCAAATGCATTTAAAAAATAAAAAAAATCTGATTGTGAATATACCAAAATAGATGTCTTTGTGTGCCAA
GTCGTCAGAAACAATGAAATAGCAGGATCCCATAGATGGTAGGGTGTTGAGTTGGTGGCTATAACACGACAAAAAATGGT
TAGAATTGCTAATTTGAAGCAGGGTAGACAACTTAGGTCCTAGGGTGGAGCAATATCACAAGGTTGTGGGGAGGCAATTA
CAACGAGACATCGACAGAAGGGAGACGAAGATCACCCAGTTATCAGCCCAAAGTTCGGCCCAAAAAAGAATAAAGTTACA
TTAAGGTCCATGTATTACTAAGAGTATATTGACTTTGAAAATAATAGGTTTAAAATCTCTAATCAAAATATTTGGCCAGG
TCGGCTTTAAGATCCGTCGGATTGTTATAATTATACACAGTCCCTCGATAGTTAAGTGTGTGTGTGGTTACTTCGTCAAC
CCCCGAAGCTTCGTAAATCTGGTCTTCAGTAGAGGTTGCGTAATTTTTATGTGTGCACCTACAATGTTAACATAGGTTTC
CG-AAAAAGATTGTGGTGAATTGGCCTTTTGGGGCGTGTAAGTGAGCTCTTTC----------TTGACAGGAGTGAGTGA
GGAATCCAAGTGACCCGTTCTTGTC---CAAGCAGCAGCTTGCAGCAAGCAATTCAGCCAAAAGCAACTGCAAACACGAA
GCTCCCACCACTGATTAAAATATCGCAAAATAAACTCCATTAGCCATTTCTCTTCCATTATTACCTCCCTTTAAATAGCC
TCTCCACTGCACCCTCCTCAACTCGTGCTAAAACCCCACAGCAGCAAAGCATTCCCAACGAAGACAAG-AATCCTCTCTC
AC----TCCTCAGTCGGTGCTTCCACACAGACAGCGATGGAGCCGAACATGGCGCCGCGGAGGCTGTGGCACGTGGTGCG
CGCCGTGCTGTTCATGCTCCGCAAGGGCATGTCCAAGCGGAAGCTGTCCATGGACCTCCAGCTCCTCCTCCACCGCGGCA
AGATCGCCGGCAAGGCCCTCAGCAGGCTCATGAGCGCCCACGGCCACCACGACCAGGCCGCCTCCAGGTCGGCCGCGGAG
GCACCTCCGCCGGCGTCGTTGTCGCGCCGCACCCTCGACCCCGCGCTCGCCGTCTATGGCCCGCGCGGCGCCGGCCGCGA
GGTGGAGTTCAGCTGCAGCAACACCCCGTCCTACCCGCCCGTCCAACTCATCCCCGCCAAGCGCCGCCGCCGCAACAACC
GCCGCACCCACCGCGGCGCCAACGGCGCGGAGCCAGGGTGGTACAACTACGACGCGGCCGACATTGCCAAGGTCTTCGAG
GTCCTCAACGACGAGCAGCTGCTGAACGAGGTCGTCGGCGACGGCGGTGCGGCGCCCCCCGCCGTGGTGGCGACGCCGTC
CCCCGCGCTGTGGTCGAGCTTCGGCCGCAGCCCGGCGCCGGTGAGGCAGCTGCGGATCACCGACTCGCCGTTCCCGCTGA
GGGACGACGCGGCGGATCTGGAGGGCGGGCTGGTGGATCAGGAGGCGGACGAGTTCATCAAGAAGTTCTACGACCAACTG
CGCAGGCAGCAGAACCTCGCCGCCGCCACCCCGGAGTACGGCTACGCGGGTCGGGCCGCCGGCGTCGCGTACTAGGAGCT
ACACTC----GCCTACGTGCCGATCGAAACGTCCATGCATA-------TAGGTGTTAGCTACTTCCCGCGCGCATGCATC
TTTCCGTTCCAAGTGTGAAGTGTGAACCTGCCT--GCTCCAGTACATATATGGTTGTGATCTTGTGCATAGACCAAGC--
ATGTTTGTACGTAGAGAGCTCACTTACTATC---ACTCTAATAACTTTCTTGGAGCTAGCTGTGAGATTTTTC-GTGTTT
GATCAGTTGCTGTAGATCCATATGCATGTACTATATCACTAGTTCACGACTACTAGTAGGTAACAAGATTGCACAACCT-
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>SNPs
-----------S------------------S-----------------------------------S--------SS-SS
-----------S--S----------------------SS-----------------------------------------
------------S------------S----------------S-------------------------------------
S----S------------S-S----------------S--------------------------S------S--------
-------------------------------------------S------------------------------------
----------------------------S------------------------------------------------S--
--------------S---------------S----------S-S------------------------------------
----------------------------------S---------------------------------------------
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-----------------S---S----------------------------------------------------------
----------S---------------------------------------------------------------------
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----S----------S---------------S------------------------------------------------
-------------------------------------------S------------------------------------
-----------------------S-------------------------S------------------------------
--------------------------S--------------------------S--------------------------
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----------------------------------------------------------S---------------------
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---------S----------------------------------------------------------------------
---------------------------S----------------------------------------------------
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-SSS-S------------------------S---S------------------------------------------S--
----S------------------------S-S-SS--------------S----------------------------SS
---------------------------SS-SSSS--------------------S-------------------------
--------S----------------S---SSSS--S-SS-SSSSS--S---------------------S---------S
-SSSS-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------S---------S--SS--SSS-SSSSSSSSSSSSS--S----S---S-----------S----S------SS
SSSS-----------------------SSS---------------------------------S--------------S-
----S----S------S-----------S-------------S-----------------------------S-------
--S--S-----S--SSSS-------S-------------S------S------------SSSS
>forward_524
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------------------------AGAAGACGCCCCAGTTCTTG------------------------------------
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>reverse_3005
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--------------------------------------------TCGTGTCAGGTCTCTTTGCC----------------
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