>input_sequence_69653
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-----ATGGACGTCTCAGCCACCGGAGCAGGCGCGAAGGCCAAGAAGGGCGCCGCAGGGCGCAAGGCCGGCGGCCCAAGG
AAGAAGTCCGTGTCGAGGTCCGTCAAGGCCAGGCTCCAGTTCCCGGTCGGCCGCATCGGGCGCCTGGTTTTTAATTTCAG
TTTCAGAAAAATTTCAGCACCAACCAAAATCACTGAAATTCAATGAATTTCAGTGATTTCAGTTTCCATTTCAGCCAAAT
GACCGAAATATTCACTTGAATTCAAATTTTTTTTAATTTTAAAAAATATTTTGAAATATATTGGAATTGTTGTGCTATAT
TGAAATTGCTGAAATATTTTGACCGAAATTTAATATTTCAGTGTCTGCTGAAATTACTGAAATTCAGTGGATTTCATCGA
AATCCCACTGAAAGTGAAAACCATGATCGGGCGGTACCTCAAGAAGGGCCGGTACGCGCAGCGCATCGGTACCGGAGCTC
CCGTCTACCTCTCGGCCGTCCTCGAGTACCTCGCCGTCGAGGTGCTGGAGCTCGCCGGCAACGCCGCCAAGGACAACAAG
AAGAGCCGCATCATCCCGAGGCACCTGCTGCTCGCCGTGAGGAACGACGAGGAGCTCGGGAAGCTGCTGGCAGGCGTCAC
CATCGCGCATGGCGGCGTGGTGCCCAAGATCAACCCGGTGCTGCTCCCCAAGCGGACGGCGGAGAAGGCGCCCAAGGAGG
GCAAGTCGCCCAAGAAGGCCGCCAAGTCCCCCAAGAAGGCTTAG------------------------------------
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>chr7B_1_TraesCS7B01G050300
TACATATAGAAATGAGAAAACTTAATTTATATACAACAAAA-TGCACTTGTGCCAATGCCATAATAAAGCCGACACTTCA
TATAT-AAAAAAGGCACTTATGCCAAAGGATGTGTAGCTGCCACCACGTGTGCGTAGCTACCACCATGCATGGGAAATCG
CCTCTCTTTGACTTATACATCGAATTGTCCATCAATCGAATCATCCAACACG---------TGATCTCCTTACCGATAAA
TCTACATGTTCAATCTTCTCTGTTAATGCACACACATATCTTCCATACAAATTTGCATCCATTGATGC---GATTTTTTT
TCAAGAATACGCCAAAGGAGTACACTAGCTTTATAGAAGATAGAAAATATTTACAAAAGGTTACAACAAGGTGTAGATTA
CCACGAATCGGCAACCCC----------------------------CACTACTCGCAATATCTTAGCACTCCGGACCTCC
CCGCTAAAGTCCACAAGCGTAAATCCTCGAAAATGAGTTGGACCATGCCCCACACATCGCATATGGTGCCTGTGCCCAAT
ACGCGTCCGTTCCGTTGCTTCCATACCGTCCGTTCCGTTGTGGAGAATTGATCTCTATCATAT--TTTTCGTTGAGCTTG
ATCTCTATCATATCTGAGTGACGCTTGGCAGTTGCTACCTACCCACCCACGCCGCGAAATTCAGCGCTTGGCTGCCACCC
CTTCCCCCAAAATCTCCTCACCGTACGCGGGAAAACGGAGGCGCAAAATTCTCCGGCCTCCAAAATCCCCTCGCACCTGA
TTGGTCCAACCGTGCTTCCCACGGATCGCTCCTCCCA-GACCGCATCGAGACCGTCCACGCCCTCCCCATCCCACCACCC
AACGACCGCCCCCACGGATCGACAGGCGCACCATGGCCGCCGTCCGCACCGTTTGAATACTCTGGCCGTCTCGCCGCATT
TCCCACCAGTCCAGAGCTCGCCATCCCAATCTCTCAGCACCAAACATCTTCTCTTCCGCGCCTCGACGAGCATCAGCGGC
TAGCCATGGACGTCTCAGCCACCGGAGCAGGCGCGAAGGCCAAGAAGGGCGCCGCAGGGCGCAAGGCCGGCGGCCCAAGG
AAGAAGTCCGTGTCGAGGTCCGTCAAGGCCAGGCTCCAGTTCCCGGTCGGCCGCATCGGGCGCCTGGTTTTTAATTTCAG
TTTCAGAAAAATTTCAGCACCAACCAAAATCACTGAAATTCAATGAATTTCAGTGATTTCAGTTTCCATTTCAGCCAAAT
GACCGAAATATTCACTTGAATTCAAATTTTTTTTAATTTTAAAAAATATTTTGAAATATATTGGAATTGTTGTGCTATAT
TGAAATTGCTGAAATATTTTGACCGAAATTTAATATTTCAGTGTCTGCTGAAATTACTGAAATTCAGTGGATTTCATCGA
AATCCCACTGAAAGTGAAAACCATGATCGGGCGGTACCTCAAGAAGGGCCGGTACGCGCAGCGCATCGGTACCGGAGCTC
CCGTCTACCTCTCGGCCGTCCTCGAGTACCTCGCCGTCGAGGTGCTGGAGCTCGCCGGCAACGCCGCCAAGGACAACAAG
AAGAGCCGCATCATCCCGAGGCACCTGCTGCTCGCCGTGAGGAACGACGAGGAGCTCGGGAAGCTGCTGGCAGGCGTCAC
CATCGCGCATGGCGGCGTGGTGCCCAAGATCAACCCGGTGCTGCTCCCCAAGCGGACGGCGGAGAAGGCGCCCAAGGAGG
GCAAGTCGCCCAAGAAGGCCGCCAAGTCCCCCAAGAAGGCTTAGGGAGGCCCGCTGATTTGTGTCAGTATGTAATAAGCT
GTTCGCCTAGCGGCATCGATGTAATGTTTGTTGTTAATGAAAAAAAATGTCAGAAATCTCTGACTTTGGTACTCCTCTTC
GCGAAATTCAGCGGTCGGCCGCAT--------------------------------------------------------
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-------------------------------------------------------CGATTGTCAGGCGAAAGGTCTAATC
CTTCTCTTCGCCTCCTAAGCCTGATTTTAATTGTTTGGTTCAACAGAACATCAAAAGTG---------------------
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----------------------------------------CTACTGATGAACGCCAAATTTTGCTTTAGGAAGTATATAT
TCCTTGATTCAATTGTAGAAACTGAGTAATTAGCGACTTGCAAAATTTCTTGAGCTAATTATGTGTTTTTGACTGCTATT
AATCTGTTCATATCATAGATACCTGTGTGCAAGTG-TTATGCTATCAATTTTAGATTTTTGAGCATCTCCATAGATGA--
--TGTAAAATGCATTATTAAATTATGCTTTGAATAAAATTTACATCATCA----------------------AAACATCT
AT--TCCAACAGACGATGTGG---AGGGCACTAGTGTTGAGCTCCAACAGGTGATGTAAAATAGGGCAGCCACACAACAA
CCGCTCCACAATTTCATACATATTGGA-CCAAATAACAACAAAATCATCTCAAATTGATC------------------AT
AAATCATCTCAAAATAAATCCTAAATCATCTAAAATAAACACTAAATCATCTCAAACAAATCATCATCAATATTCGAAGA
TGGTAGCCGTGCCGATCACAGAGGCCTCTCATCCTGTCTCGTTGATGCGTGCGGATAAGGGGTTGCCCGTAATTTCGGCG
AGGTGGCGCAAGCAACGCCGACCGAAGCAACAACTGCTCGGCTCGTTCACCACGGTCGTGCACCTGCCCGCGGTAGCTCC
GACGACCGGAAGACCTACTTCGGACGACGGCCACGTGCTACTGGAGCCATCACGGGCGCCGGCGCTCCGGCCAACAGACA
AATCGACCGGAACTCTGCTCGGCGGCGGATCCAAATTGGCGCTATGGAGGGACCTCCGGTGGCTGTC
>chr7A_1
TACAAG-AGAAATAAGAAAACTTAATTCATATACAACAAAAATGCACTTGTGCCAATGCCATAAGAAAGCTGACACTTCA
TATATAAAAAAAGGCACTTATGCCAAAGGATGTGTAGCTGCTACCATGTGTGCGTAGCTACCACCATGCATAGGGAATCG
TCTCTCTTTGACTTATACATCAAGTTGTCCATCAATCGAATCATCCAACGCATGATCTGCATGATCTCCTTACCGATAAA
CCTACCTGTTCAATCTTCTCTGTTAATGCACACCCGT-TCTTTCAAACAAATTTGCATCCATTTATGTGGAGATTTTTTT
TCAAGAGTACGCCAAAGAAGTACATTAGTTTTATAGAAGACAGAAAATATTTACAAGAGATTACAACAAGGTGTAGATCA
CCACAGACCGGCAACCCCACCAACTCCACTCCGAACCCATCTAGCCCACTACTCGCAATATCTTAGCACTCCGAACCTCC
CTGCTAAAGT---------------CTCGAAAATGAGTTGGACCATGCCCCACACATTGCATATGGTGTCTGTGCCAAAT
ATGCGCCCGTTCTGTTGCTTCCATAGCGTCCGTTCCGTTGCGGAGATC-GATCTCTATCATATACTTTTCGTTGAGCTTG
ATCTCTATCATATCTGAGTGACGCTTGGCAGTTGCCACCTACCCACCCACGCCGCGAAAATCAGCGCTTGGCTGCCACCC
CTTCCCCCGAAATCTCCTCACCGTACGCGGGAAAACGGAGGCTCAAAGTTCTCCGGCCTCCAAAATCTCCTCGCACCTGA
TTGGTCCAACCGTGCTTCCCACGGATCGCTCCTCCCCCGACCGCATCTTGACCGTCCACGCCCTCCCCATCCCACCACCC
AACCGCCACGCCCACGGATCGACAGGCGCACCACGGCCGCCGTCCGCACCGTTTAAATACTCCGGCCGTCTCGCCGCATT
CCCCACCAGTCCAGAGCTCGCCATCCCAATCTCTCAGCACCAAACATCTTCTCTTACGCGCCTCGACGAGCATCAGCGGC
TAGCCATGGACGTCTCAGCCACCGGAGCAGGCGCGAAGGCCAAGAAGGGAGCCGCAGGGCGCAAGGCAGGCGGCCCCAGG
AAGAAGTCGGTGTCGAGGTCCGTCAAGGCCGGGCTCCAGTTCCCGGTTGGCCGC--------------------------
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-------------------------ATCGGGCGGTACCTCAAGAAGGGCCGCTACGCGCAGCGCGTCGGCACGGGCGCCC
CCGTCTACCTCGCGGCCGTCCTCGAGTACCTCGCCGCCGAGCTGCTGGAGCTCGCCGGCAACGCCGCCAAGGACAACAAG
AAGAGCCGCATCATCCCGAGGCACCTGCTGCTCGCCGTCAGGAACGACGAGGAGCTCGGGAAGCTGCTGGCCGGCGTCAC
CATCGCGCACGGCGGCGTCGTGCCCAAGATCAACCCGGTGCTGCTCCCCAAGCGGACGGCGGAGAAGGTGCCCAAGGAGG
GCAAGTCGCCCAAGAAGGCCGCCAAGTCCCCCAAGAAGGCTTAGGGAGGCCCGCTGATTTGCGTCAGTATGTAATAAGCT
GTTCGCCTAGCGGCATCGATGTAATTTTTGTTGTTAATGG--AAACATGTCAGACATCTCTCTGACTTTGTTATATTTTG
TGCTTTGTTATCTGTTCTTGGTGCTAGTACTATGGAGGATATTTAAATTTGTGCGGTAGGCTGATTGGAATCTGCTGATT
TTGGTATTATGGAGGGCAGCGTAGCCTGCTCTCGGCACCAAAGTTAGCTTCTCTGCGCTTAGCACGTTGCACGGTACTCG
CCATAGCCGGCTCGCCCAAGAAGGAAGGATCTGGCGGGGGCTGAGGGCAACGAGCCGATTGTTTGGGGAAAGGTCTAATC
CTTCTT-----CTCCTAAGCCTGATTTTA-TTATTTGGTTCAACAGAAGCATCTCCACTAGAAGATGTATATGCAAAAAT
ACTAACTATTTTTGCATCTCTGAGGCCCCAAAGCATCTTAAAAAATACATCTTTGCCTTCTGAAAATGTAAAATACAACA
CCTCACGATGAAATTTGCATCTATGCCGACCGGAGATGTAAAAAGGGTAGCCACGTGCTAACTGCCAACTGCCGTTTCTT
TTCGTTTTTGTGCGACCGTCGCTCGTGTGCCTCCTGCCTCTCACCGCCACCATGGCCGACGCCGATGACCTCGCCGCCTT
CTGTGACTCCGTCGCCGATGCCCTGACCCACCTCGTCACGCCCGCCATCTCCACGCAAACTTTCCCCAATCCGGCCTTCG
ACACCATGCCGGTGTCTCGGATTTGCCACACCCTGGCCGGTCGTCGTCGTGCTGAAGGCACCTGCAAAGAAGCGGCGGGC
CTCCAAGCCACGTGGTGGAGGCGTGAATCGGCCGGTAGCCGGTTTTACATTTCTTGTTTACATCTTTTATTGGAGTTGTT
CTTTTATATCTCCGTTTTGCATCATCTGTTGGAGTTGGCCTCTTTCTAGAGATGCAAAAGGCACTTTTTGGAGATGTAAA
TTTTTACATCTCCAAATCTGCATCTTCTATTGGAGATGCTCTAATGATGAACG--------------------------T
TCTTTGATTCAATTGTAGAAATTGAGTAACTAGCAACTTGCAAAATTTCTTGAGCTAATTATGTGTTTTTGACTGCTATT
AATCCATTCATATCAGAGTCACCCGTCTGCAAGTGATTGTGCCATCAATTTTAGATTTTTGAGCGTCTCCAATAGAAGAT
GGTGTAAAATACATTATTAAATTGTGCTTTGAGTAAAATTTACATCATCAAAAAGCGGTTTTGTACATCATCAAAACATC
TATCTTCAACAGATGATGTAAAATACAGCACTAGT-----GCCCCAATAGGTGATGTAAAATAGGGCAGCCACACAATAA
CCGCTCCGCAATTTCATACATATTTGAACCAACTGACATCA---------------------------------------
AAATCATCTCAAAATAAATCACAAATCATATCAAATAAATATTAAATCATCTCAAACAAATCATCATCAATATTTGAAGA
TGGTAGCCATGCCGGTCACAGAGGCCTCTCACCCA-CCTCGTTGACGCGTGCCGATAGGGGTGTGCCCGTAATTTTGGCG
AGGTGGTGCAGGCGACGCCGACCGAAGCAGCAAGCCCTCGGCTTGGTCGCGGCGGCCGCGCACATGCCCGTGATAGCTCA
GATGGCCCGAAGACCTACTCCGGACCACGACCACGAGCTTCGGGAGCCATCACGGGCGCCGACGCTCCAGCCAACAGCTG
AATCGGCCCAAACTCTGCGCGGCGGCGGATCCAAAT-------------------------------
>chr1A_2163
GAGCATCT------------------------------------------------------------------------
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-------------------------------------------------------------------TCAATCGATGA--
--TGTAAAATACATCACCAAATTGTGCTTCGAGTAAAATTTACATCACCA----------------------AAAACCTC
CAACTCCAACAGATGATGTAAAATAGGGTACTAGT-----GCTCCAATAAGTGATATAAAACAGGGCAGCTGCACAACAA
CCGCTCCACAATTTCATACACATTTCAACCAAATAACATCAAAATCATCTCCAATAAATCCTAAATCATCTTAAAATCAT
AAATCATCTCAAAATAAATCCTAAATCATCTCAAATAAATCCTAAATCATCTCAAACAAATCATCATCAATATTCGAAGA
TGGTAGTCAAGCGAGTCATAGAGCCTCTCCT--CTGCCTCGTTGACGCGTACCAGTAGGGGGCTGCCCGTAATTTCGGCG
AGGCGGCGCCCGCGATGCCGACCGAAGCAGCGGCCGCTCGGCTTGGTCGCGGCGGTTGCGCACCTGCCCGCAGTAGCTCC
GGCGGCTAGAAGACCTACGACGGACGACGACCACGAGCTCCAGGAGCCATCACAGGCGTCGGCGCTCCGGCCAACAGCCG
AATCAGCCGAAACTCTGCGCAGTGGCGGATCCAAATCGGC---------------------------
>SNPs
----SSS------S-------------S------------------------------------S-----S---------
-----------------------------------------S----S------------------------S--S-----
S--------------------S-S-------------------------S-S----------------------------
S----S---------------------------S-S-S----S--S-----------------S---S------------
------S----------S------S---S-----------S---------------S--S------------------S-
----SS-S-----------------------------------------------------------------S------
-S--------SSSSSSSSSSSSSSS--------------------------------S----------S-------S---
-S---S------S------------S--------------S-----SSS-------------------------------
-----------------------------------S-----------------------S--------------------
--------S---------------------------------S----S-------------------S------------
------------------------------------S----------SS-------------------------------
---SS--S-S-----------------------S--------------------S-------S-----------------
S------------------------------------------------------S------------------------
-------------------------------------------------S-----------------S--------S---
--------S---------------------S----------------S------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S------------S----S--S--S--S-
-----------S------------------------S----S--------------------------------------
--------------------------------------S--------------------------------S--------
---------S--------S-------------------------------------------------S-----------
-------------------------------------------------------------S------------------
-------------------------S-------------SSS---S--------S------SSSSS-SSSSSSSS-S--S
SSSSSSS-S-S-S--SSSSS-SSS--------------------------------------------------------
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--------------------------------------------------------------SS--S-------------
-----SSSSSS------------------S--S---------------SSSSSSSSSSS---------------------
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-------------------------------------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSS-
--S------------------S-------S----S---------------------------------------------
----SS---------S--SS---S--S-----------S---S---------------------S-------S-------
----------S------------S--------S------------------------------------------SSSSS
SS-----------S-----SS--------------SSSSS-------S--------------------------------
------------------------S-------------S------------S---SS-----------------------
-------------------------------S-------S----------------------------------------
--------S-----S----------------S----S--------S------S----S----S-----------------
----------S--S---------------S----S--------S-S--S-SS------S---------------------
----S--S-----------S---------S-----S---S-S-----------------------------------S-S
-----S---S--------S-----------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_788
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------------------------------------------------TTCTCCGGCCTCCAAAATCC------------
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>reverse_3525
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----ACCGGAAGACCTACTTCGGA--------------------------------------------------------
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