>input_sequence_69582
--------------------------------------------------------------------------------
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---------------------------------------------AGCGGCGGACATACTCGTTGCTCTCCGCTTGGAAT
TGAGACGGTCCACGCCGGCCGATCGAATGTGGACGGAGAGGAGGGCGAGGAGGAGCAGTTCCATGGCCGGCGGCGGAGGA
GGGCGGGCGCGCGGCGCGGAGGGGAAACGGGCGGCGCCGCAGGGGCAGAGGGCGCCCGCCGCGACCGCGGGGTACTTCAC
GGCGGAGCTGGCCGTACTGTTCCTCTGCCTGACCGCGCTGCTGGTGTTCCTGCCGCTGGTCCTGCCGCCGCTCCCGCCCC
CGCCGTCGCTGCTGCTGCTGGTCCCCGTGGGGCTTATGGCCGTCCTAGTCGCGCTGGCGTTCGTGCCGTCCGACAGCCGG
AGCATCGCCTCGTCGTGCCATTGAAGAGGACAGCGCGCGGTAGTAGGAGTGGAGAAATCATTTTGCTTTTTGTTTTG---
----ATCGACAGTTTTG-TTAACTGCTAACACGATCCATGTAGAGAAACCAGAGCATTATTTAATCAGGTGCGACCGTCA
AAGAACACATTTTGTGCGT-AAGGATTTATCCAACTATTTTGTCGAAACTAGGATTTGTCAAGTGTTAGTGCTGAGTTAG
GTCATTTCGAC-----AGCCACAAATTTCCTTCTGCATCTGTTCACGCATACGGACATAAGAGATCGTCGTCCAACGCTA
TTTTATACTCTCTCCGTTCCATAATATAAAAGTATTTTTGACACAGCATTTGGGTAAAAAATGTTCTTATTCAAAAATGC
TCTTATACGTTCTTATTAAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr1D_1_TraesCS1D01G260800
ATCCAGCCCCAGCCAACTTGCGCTCGCTCGCCTTTACCATAGAGATATGCAAACACGCCGCGCGCCTATATATATCGTAA
GAAAAGCCGCTGCTCTCTGAACC---------GCTGATACGCTGATACGATCCTGGGAGTACAGCACGGTCGCCTTGTTT
AATCGGCCAGAAATATCCGGTGCATGCACAAAATCCATGGCTTCC----GGTCTGATTATCTTTATCTT-GATCTTGCCA
TGTCCCTGCCAAGGCCCAACGGGA---GGGAGTATCGGTGAAGAGATACTGCACATCTCGCCTGAGATCTTGCAACGACC
GGTTATCAATCCAGCCAGTACATCGAGGCCCTTACCGGAAACTAATTACT---CCCTCTGTTCGAAAATACTTGTCGGAG
AAATGGATGTAT-----------------------------------TATAATTTTAAATACATTCATTTTTATTCATTT
TCT-----------ACGACAAGTAATTTTGGACGAAGAGAA---TACTAAAGAACTTCAAATTATCCTTACTGAAGACTG
TCAACATGGCATAATTACACCCCATTAGA-------------TAGCTAGCACCCCACCCGATAAGTCTCAAAGAGACTAC
GAGACGAGATTGTTGGACGGACGGGATTC--TCTCGGCAGGGGGGAGGAACCTGCATAACCTTAACAACACTAAATCGGC
GGCCATGTGAGGCTGTCTCGTCTGCTTGCATCACCGGGAGGAAAAGCAGCCATCAAAGGATGACCAGCTGACCGTAGGTG
CCAAAG-CGCCCGATACATTGCACCCGGGCCTCCAAATCTTCAGGGTCTGCCCCCCAACACAGGCCAATTGGCCGACGGG
TACACTTGCGCATCCGGGGCAGCCGATCGACCCCGCACTCGCGCAGCCACGCCCACACCCACGCCACCAGTATCTGTCCT
TGGCCATTGTGCCGCCCGAATTCAGAGCCATCTTCGATCACAATCCATTGCAACAAGTAGCGAGCCCTTCTGGTTAGTCC
CTATATGTACCACGTACAAGTTGTCTGCTGCTGATACAATCAGGCAGCGGCGGACATACTCGTTGCTCTCCGCTTGGAAT
TGAGACGGTCCACGCCGGCCGATCGAATGTGGACGGAGAGGAGGGCGAGGAGGAGCAGTTCCATGGCCGGCGGCGGAGGA
GGGCGGGCGCGCGGCGCGGAGGGGAAACGGGCGGCGCCGCAGGGGCAGAGGGCGCCCGCCGCGACCGCGGGGTACTTCAC
GGCGGAGCTGGCCGTACTGTTCCTCTGCCTGACCGCGCTGCTGGTGTTCCTGCCGCTGGTCCTGCCGCCGCTCCCGCCCC
CGCCGTCGCTGCTGCTGCTGGTCCCCGTGGGGCTTATGGCCGTCCTAGTCGCGCTGGCGTTCGTGCCGTCCGACAGCCGG
AGCATCGCCTCGTCGTGCCATTGAAGAGGACAGCGCGCGGTAGTAGGAGTGGAGAAATCATTTTGCTTTTTGTTTTG---
----ATCGACAGTTTTG-TTAACTGCTAACACGATCCATGTAGAGAAACCAGAGCATTATTTAATCAGGTGCGACCGTCA
AAGAACACATTTTGTGCGT-AAGGATTTATCCAACTATTTTGTCGAAACTAGGATTTGTCAAGTGTTAGTGCTGAGTTAG
GTCATTTCGAC-----AGCCACAAATTTCCTTCTGCATCTGTTCACGCATACGGACATAAGAGATCGTCGTCCAACGCTA
TTTTATACTCTCTCCGTTCCATAATATAAAAGTATTTTTGACACAGCATTTGGGTAAAAAATGTTCTTATTCAAAAATGC
TCTTATACGTTCTTATTAAAAACGCTCTTATATTATGGCATGGGAGGAGTATATATCTGTCAATAAATTCAAATTCAAAC
GTACTTCTATCCACACAGCGTGCCGGATCGGATCGCCTGATCAC------------AAC----AAAAAAGGCAACTATGC
TTAGTTTTTACATGCCCGAATCCAAAAGAATATCAGTCTGGTAGTCCGTGCA--TTTCTGCCCTGCCGGACCGGCAATCC
CAGTCGTCTGCTCCCT---AATCAAGGTGGTGTCGCCGCCGCCGCGTAGGCAGCCTCCGCCTCCTCGTCCACGTCCGCGT
ACGCCTCCGCCGCGTCCTCGCCGTCCACCGCCGCCAACTACTGATCTTTCTACCACTGCAACATCTAATAGCGGACGGAT
GGCATGATGGTTCTTGCGTCGACATCCAAAGAGTCCACATTCAAGGTCAACATCTTGGCCTCCTCCGCATTGGCGGCGAT
CTTCACCTTCTTTTCATTGAGCATGGCCTTTCTCTCTTCGATCATGGTCCTCCTCTTTTCGAGCTTGAG-----------
--------------------------------------------------------------------------------
-----------------------TTTCTTGTCCGTCGCCTCCATCAACAGTTTGAACCTCTCC------TTCTCCTCCTT
GATGTCCGACTGCTTCACGCATGCCTC--CTCCTTCTTTACCAAGATGTTCTTGAACCTCTTCATCAGCTTGGCCGCCGC
ACCTTCCCACTTTGCCCTCTCCACCTCCCACTTCTTCCTGTCCGTCCTCATAACCCCCACCTCCTCCCTCGCCTCCGTCG
TGGGTGATGTCGAGCATCTCCCTGTGCGGGTCGTTGTACGCTGACTCCCCCGCTCTAGGCATTGCAGCGAACAACGTGCG
GGCAACCATGTGCTCCCCGCCCACCGTCCGTGCTCGGACGAGCTGCGGGGAAGAATACTCGGAGAAGAGCGGCGCCGCGT
TAACATAGATGATGTAAGGCACTGTTGAGGGAGTCCTGGACTAAGGGGTCCTCGGGCGTTCGGCCTGTTATCCATGGGCC
GGATTGATGGGCTGTGAAGACATGAAGGCCGAAGACTGTACCC
>chr1A_1
ATCCAGCCCCAGCCAACTTGCGCTCGCTCG-CTTTACCATAGAGATATGCAAACACGCCGCGCACC--TATATATCGTAA
GAAAAGCCGCTGCTCTCTGAACCCAGCTGCATGCTAATACGCTGATACGATTCTGGGAGTACAGCACGGTCGCCTTGTTT
AATCGGCCAGAAATATCCGGTGCATGCACAA--TCCATGGTTTCC----AGTCTGATTATCGTTAGCTTTGATCTTGTCA
TGTCTCTGGCTCTCTGCCACTACCAAGGGGAGTATCAGCGAAGAGATACTGCACATCTCGCTTCAGATCTTGCAACGACC
GGCTACCAATCCAGCCAGTACATCGAGGCCATTACCGGAAACTAATTACTACTCCCTCCGTTCCTAAATATTTTATCTTT
CTAGAGATTTGAACAAATGACTACATACGAAGCAAAATGAGTGAATCTACACTCTAAAATATATCTATATAAATCCGTAT
GTGAAATCTCTAAAAAGACAAATATTTCGAAACGGAGAGAGTACTACTAAAGAACTTCAAATCATCCTTACTGGAGACTG
TCAACAGGGCATAATTACACCCCATTAGCTACGCTATCTATCTAGCTAGCACCCCACCCGATAAGT---AAAGAGACCAC
GAGACGAGATTGTTGGACGGACGGGATTCTCTCTCGGCAGGGGGGAAGAACCTGTATAACCTTAACAAGACTGAATCGGC
GGCCATGTGAGGCTGTCTCGTCTGCTTGCATCACCGGGGGGGAAAGCAGCCATCAAAGG-TGACCAGCTGACCCTAGGTG
CCAAAGGCGTCCGATACATTGCACCCGGGCCTCCAAATCTCCAGGGTCTGCCCCCCAACACAGGCCAATTGGCCGACGGG
TACACTTGCGCATCCGGGGCAGCCGATCGACCCCGCACTCGCGCA------CCCACGCCCACACCACCGGTATCTGTCCT
TGGCCATTGTGCCGCCCGAATTCAGAGCCATCTTCGATCACAATCCATTGCAACAAGTAGCAAGCCCTTCTGGTTAGTCC
CTATATGTACCACGTACAAGTAGTCTGCTGCTGATACAATCAGTGGCATACTACTTGCTCTCGGG-TCTCCGCTTGGAAT
TGGGACGGTCCGCG----GCGATCGAATGTGGACGGAGAGGAGGGCGAGGAGGAGCGGTTCCATGGCCGGCGGCGGAGGA
GGGCGGGCGCGCGGCGCGGAGGGGAAACGGGCGGCGCCGCAGGGGCAGAGGGCGCCCGCCGCGACCGCGGGGTACTTCAC
GGCGGAGCTGGCCGCGCTGTTCCTCTGCCTGACCGCGCTGCTGGTGTTCCTCCCTCTGGTCCTGCCGCCGCTCCCGCCGC
CGCCGTCGCTGCTGCTGCTGGTCCCCGTGGGGCTTATGGCCGTCCTGGTCGCGCTGGCGTTCGTGCCGTCCGACAGCCGG
AGCATGGCCTCGTCGTGCCATTGAAGAGGACAGCGCGCGGTAGTAGGAGTGGAGAAATCATTTTGCTTTCTTGTTTTTGA
TTGAATTGACAGTTTTG-TTAACTGCTAACACGATCCATGTAGAGAAATCAGAGCATTATTTAATCACGTGCGACCGTCA
AAGAGTACATTTGGTTCGTCAAGGATTTATCCAGCAATTTTGTCGAAACTAGGACTTGTCAAGTGTTAGTGCTGAGTTAC
GTCATTTCCAC-----ACCCACAAATTTCCTTCCGCATCTGTCCATGGATACGGACGTGGGAGACCATCATCCAAGGCTA
TTTTGTACTTTCTCTGTCTC-------------------GACGCTACACTAGTGCAAAAAATGTTTTT------------
----------------------------TATATTATGGGACGAAGAAAGTATATATCTGTCAGTAAATTCAAATTCAAAC
GTATTTCTATCCACACAGCGCGCCGGATCACACCAACACCGGATCGCATGCCTGATCACAAAAAAAAAAGACAAGTATGC
TTAGTCTTTACATGCCCGAATCCAAAAGAATATTAGTCTTACAGTCCATGCA--TTTCTGCCCTGCCGGACCGGCAATCC
CAGTCGTCTGCTCCTC---GATCAAGGTGGTGTTGTCGCCGCCGCGTAAGCAGCCTCCACC------TCCTCGTCCGCGT
ACGCCTCCGCCGCGTCCTCATCGTCCGCCGCCGCCAACTACTAATCTTTCTGCCGCTGCAACATCTGATAGCGGACGGAT
TGCTCGATGATTCTTGCGTCGACATCCAAAGAGTCCACCTTCCAGGTCAACATCTTGGCCTGCTCCGCATTGGCGGCGAT
CTTCACCTTCTTTTCCTTGAGCGCGGCCTTTTCCTTTTCGATCATGATCCTCCTCTTTTTAAGCTTGAG-----------
--------------------------------------------------------------------------------
-----------------------TTTCTTGTCCGTCACCTCCATCAACAGTTTGAACCTCTCTGCCTTCTTTTCCTTCTT
GATGTCCGACCGCTTCACGCATGCTCCTCCT---TCTTTACCAAGATGTTCTTAAACCTCTTCGTCAACTTGACAGCTGC
ACCTTCCCGCTTCGCCCTCTCCACCTCCCACTTCTTCCTGTCTGTCCTCATAACCCCT-CCTCCTCCATCGCCTTCGTCG
TGGATGATGTCGAGCATCTCCCTGTGCGGGTCGTCGTACGTCGGCTTCCCCGCTCTAGGCATTGCAGTGAACAGCGTGCG
GACACCCATCTGCTTCCTGCCTGTCGTCCGTGCCCGAACGAGCTGCGAAGAAGAATACT-------GAGCGGCACCGCAT
TAACATTGATGATGTAAGGCACCGT-------------------------------------------------------
-------------------------------------------
>chr1B_1
ATCCAGCCCCAGCCAACTTGCGCTCGCTCG-CTTTACCATAGAGATATGCAAACACGGCGCGCGCC--TATGTATCCTAA
GAAAAGCCGCTGCTCTCTGAACCCAGCAT-ATGCTGATACGCTGATACGATTCTGGGAGTACAGCACGGTCGCCTTGTTT
AATCGCGCAGAAATATCCGGTGCATGCACGA--TGCATGGTTTCCGGCCGGTCCGACTATCGTTAGCT-TGATCTTGTCT
TGCCCCTGCCAAGGCCCAACGGGA---GGGAGTATCGGTGAAGAGATACTGCACATCTCGCCTGAGATCTTGCAACGACC
GGCTATCAATCCAGCCAGTACATCGAGGCCATTACCGGAAACTAATTACTAG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------TACTAAAGAACTTCAAATCATCCTTACTGGAGACTG
TCAACAGGGCATAATTATACTCCATTAGGTAAGCTAGCTATCTAGCTAGCACCCCACCCGATAAGA---AAAGAGACCAC
GAGACGAGATTGTTGGACGGGCGGGATTCTCTCC--GCAGGGGGGAGGAACCTGCATAACCTTAACAAGACTGAATCGGA
GGCCATGTGAGGCTGTCTCGTCTGCTTGCATCACCAGTGGGAAAAGCAGCCATCAAAGGATGACCAGCTGACCCTAGGTG
CCAAAG-CGCCCGATACACTGCACCCGGGCCACCAAATCTTCAGGGTCTGCCCCCCAACACAGGCCAATTGGCCGACGGG
TACAGTTGCGCATCCGGGGCATCCTATAGACCCCGCACTCGCGCAG------CCACGCCCACGCCACCAGTATCTGTCCT
TGGCCATTGCGCCGCCCGAATTCAGAGCTATCTTTCATCACATTCCGTTGCAGCAAGTAGCAAGCCCTTCTGGTTAGTCC
TTATATGTACCACGTACAAGTTGTCTGCTGCTGATACAATCAAGCAGTGGCGGACATACTCGTTGCTCTCCGCTTGGAAT
TGGGACAGTCCACG----CCGATCGAATGTCGACGGAGAGCAGGGCGAAGAGGAGCGGTTCGATGGCCGGCGGCGGAGGA
GGGCGGACGCGGGGCGCGCAGGGGAAACGGGTGGGGGCGCAAGGGCAGGGGGCGTCAGCCGCGACCGCGGGGTACTTCAC
GGCGGAGCTGGCCGTGCTGTTCCTCTGCCTGACCGCGCTGCTGGTGTTCCTGCCGCTGGTCCTGCCGCCGCTCCCGCCGC
CGCCGTCGCTGCTGCTGCTGGTCCCCGTGGGGCTTATGGCCGTCCTACTCGCGCTGGCCTTCGTGCCGTCCGACAGCCGG
AGCATCGCCTCGTCGTGCCATTGAAGAGGACGACGCGCGGTAGTAGGAGTGGAGAAATAATTTTGCTTTTTGTTT-----
TTGAATTGACAGTTTTTTTTAACTGCTAACACGATCCATGTAGAAAAATCAGAGCTTTATTTAATCACGTGCGACCGTCA
AAGAATACATTTTGTGCGTCAAGGATTTATCCAACTATTTTGTAGAAACTAGGATTTGT-AAGTGTTAGCCTTGAGTTAG
GCCATCTCCAAGGGCAATCCGTAAATTTTGTCCCGCATCTGTAT-------------------------ATTCAACGCTA
TCCTGTATATACCCGCCAAATAGGCGGGTATTCCTCCTTTAAAAATAATA------------------------------
----------------------------------------------------ATAACTGCCAATAAATTTAAATTTAAAT
GTATTTTGATCCACACAACGCGCCGGATCGCAT-GTCCGATCAC------------CACAACAAAAAAAGGCAAGTATGC
TTAGTTTTTAC----CCGAATTCAAAAGAACACGAGTTTGACAGTCTGTGCA--TTTCTGCCCTGCTGGACCGGCAATTC
CTGTCGTCTGCTCCCT---GATCAAGGGGGTCCCGCCGCT---GTATAGGCAGCCTCCGCCTCCTCGTCCACAACCGTGT
ACGCCTCGGCTGCGTCCACGTCGTCCGCCGCCGCCAACTACTGATCTTTCTGTCGCTGCAACATCTGGTAGCGGGCGGAT
TGCACGATGATTCTTGCGTCGGCATCCAAGGAGTCCCCATTCAAGGTCAACATCTTGGCCTCCTCCACATTGGTGGCGAT
CATCACCTTCTTTTCCTCGAGCGTAGCCTTTCTCTCTTCGATCATGGTCCTCCTCTCTTCGAGCTTGAGCTTCCCGTCCG
TCGCCTCCATTAATAGTTTGAACCTCTCCGCCTTCTTCTCCCTCTTTTCCTCGAGCGCGGCCTTCCTGTCTTCGGTCATG
GTCATCCTCTCTTCGAGCTTGAGCTTCTTGCCCGCCGCCTCCATCAACAGTTTGAACCTCTCCGCATTCTTCTCCTACTT
GATGTCCGACCGCTTCACGCATGCCTG--CT---CCTTCGCCAAGATGTCCTAGAACCTCTTCGTCAGCTTGGCCGCCGC
ACCTCCTTGCTTCGCCCTCTCCTCCTCCCACTTCTTCTTGTTCGTCCTCATAG--CCC-CCTCCTCCCTCGCCTCTGTCA
CGGATGATGTCGAGCAACTCCCTGTCCGAGTCGTCGTACGTCGGCTCCCCCG--CTAGGCATTGTAGTGAACAACGTGCG
GGCACCCATCTGCCCCCCACCCGTCGTCCATGCCTGAATGAGTTGTGGCGAAGAATACTCGAAGAACAGCGGCACCGCGT
TAACATTAACGATGTAAGGCACCGT-------------------------------------------------------
-------------------------------------------
>chr2D_1809
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TTCGAATTCAAAT
TTAGTCCAATTCACACAGCGCGCAGGATCACAT-GGCCGATAAC------------AAT--CAAAAAGAGACAAGTATGC
TTAGTTTTTACAAGCCCGAATCCAAAAGAATATCAGTCCGACAGTCCATGAAATTTTCTGACCTATCGGACCGGCAATCC
CAGCCCTCTACTCCAC---GATCAAGGTGTTGTCGCCGCCACTGTAAACAA--------------------CCTCCACCT
CCGCCTCTCCCGCGTCCTCATTGTCCGCCGCCGCCA---ACTGATCTTTCTGCCGCTGCAACATCTGGTAACAGACGGAT
TGCATGATCATTCTTGCGTCGACATCCAAAGAGTCCACATTCAAGGTCAACATCTTGGCGTCCTCCGCATTGGCGGCGAG
CTTCACCTTCTTTTCCTCGAGCCCGGCCTTCTTCTCTTTGATCATGGTCCTCCTCACTTCGAGCTC--------------
--------------------------------------------------------------------------------
--------------------GAGCTTCTTGTCCGTCGCCTCCATCAACAATTTGAACCTCTCAGCCTTTTTCTCCTCCTG
GAGGTCCGAGCGCTTCACGCATGCCTT--CTCCTTCTTCGACAAGATGTCCTCGAACCTCTCCGTCAGCTTGGCCGCCGC
ACCTTCTCGCTTCGCCCTCTCCTCCTCCCGCTTCTTC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3A_1833
CACACCA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------GCGCTGGACCGCAT-GCCCGATCAC------------AAC--CAAAAAGAAACAAGTATGG
TTAGTTTTTACATGCTTGAATCCAAAAGAATATTAGTCCGATAGTCCTTGCATTTTT--GCCCCGCCGCATCGGCAATCC
CAGTCGTCTGCTCCTCCCCGGTGAAGGTGGTGCCGTCACCACCGCGTAGGCAGCCTCCGCC------TCCGCATCCGCGT
ACGCTTCCATCGTGTCCTCGCTGTCCGCCTCCGCCA---AATGATCTTTCTACTGCTGCAGCATCTGGTAGCGGACGGAT
TGCACAATGATTCTTGTGTAGGTATCCAAAGAGTCCACATTCAGGGTCAACATCTTGGCCTCCTTTGCATTGGCGGCGAT
CTTCACCTTCTTTTCCTCAAGCGTGGCCTTTCTCTCTTCAATCATGGTCCTCCTTTTTTCGAGCTT--------------
--------------------------------------------------------------------------------
--------------------GAGCTTCTTGTCCGTTGCCTTCGTCAACAGTTTGAACCTCTCTGCCTTCTTCTACTCCTT
GATGTCCGAGCTCCTCACGCATGCCTC--CTCCTTTTTCGCCAAGATGTTCTCGAACATCTCCGTCAGCTTGGTCGCTGC
TCCTTCTCTCTTCGACCTCTCCTCCTCCCACTTCTTCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_1843
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCCGGACTGCAT-GCCCGATCAC------------AAC--CAAAAAGAAGCAAGTATGC
TTAGTTTTTACATGCTTGAATCCAAAAGAATATCAGTCTGGCAGTCCGTGCATTTCT--GCCCCGCCGCACCGACAATCC
CAGTCGTTCCCTCCTCCCTGGCCAAGGTGGTGTCGTCACCACCGCATAGACAACCTCTGCC------CCCGCGTCCGCGT
ACGCTTTCGCAGCGTCCTCGCCGTCCGCCTCCGCCA---AATGATCTTTCTACTACTGCAGCATCTGGTAGCGGATGGAT
TGCACGATGATTCTTGCGTAGGTATCCAAAGAGTCCACATTCAGAGTCAACATCTTGGCCTCCTTTGCATTGGTGGTGAT
CTTCACCTTCTTTTCCTCGAGCGTGGCCTTTCTCTCTTCGATCATGGTCCTCCTTTCTTCGAGCTT--------------
--------------------------------------------------------------------------------
--------------------GAGCTTCTTGTCCATCGCCTTCATCAACAGTTTGAACCTCTTCGCCTTCTTCTACTCCTT
GATGTCTGAGCTCCTCACGCATGCCTC--CTCCTTCTTCGCCAAGATTTTCTCGAACATCTCCGTCAGCTTGGTCGCAGC
ACCTTCTCGCTTCGCCCTTTCCTCCTCCCACTTCTTCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3A_1861
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------ATCAC------------AAC--CAAACAAAGCCAAACATGC
TTAGTTTTTACATGTCTGAATCTAAAAATACATTAGTCCGGTAGTCCGTGCATTTCT--GCCGTGTCGGACCGGCAATCC
CAGCAAGCTGCCCCCC---GATCAAGGAGGTGCCGTCTCCACCGCACAGACAGCCTT------------CGCGTCTGCGT
CCGCGTTCGCCGCATCCTCATCTTCCGCCGCCGCCA---ACACATCTTTCTGCCGCTGCAACATCTGGTAGCTGACGGAT
TGCACGATCATTCTAGCATCGGCATCCAAAGAGTCGACATTCAAGGTCAATATCTTGGCTTCCTCCGCATTGGCGGCGAT
CTTCACCTTCTTTTCCTCGAGTGCAGCCTTCCTCTCTTCGATCATGGTCCTCCTCTCTTCAAGCTTGAT-----------
--------------------------------------------------------------------------------
-----------------------CTTCTTCCCCGTCACCTCCATCAACTGTTTGAACCTCTCTGCCTTCCTCTTCTCCTT
GATATCCGAGCGCCTCACGCATGCCTC--CTACTTCTTTGCCAAGATGTCCTCGAATCTCTTCGTCAGCTTGGCCGCCGC
ACCTTCTCGCTTTGCCCTCTCCTCCTCGCACTTCTTTCCT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr4D_1909
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------AAAATAACATTAGTCTGGCAGTCCGTGCATTTCT--TGCCTGCCGAACCGGCAATCC
TAGCTATTTCCTCCCC---GATCAAGGTGGTGTCGTCGTCGCCGCGCAGGCAGCCTGCACC------TCCGCGTCCGCGC
ACGCCTCGGCCGCATCCTTGCCATCCACTGCCGCCA---ACTATTCTTTCTGTTGCTGCAATATCTGGTAGCGGACGGAT
TGTAAGATGATTCTTGCGTTAGCATCTAAAGAGTCCATATTCAAGGTCAACATCTTGGTCTTCTCCGCTTGGGCGGCGAT
CTGCAACTTCTTTTCCTCGAGCGCGACCTTCCTCTGTTCGACCATGGTCCTCCTCTCTTCCAGCTTGAT-----------
--------------------------------------------------------------------------------
-----------------------CTTCTTATCCGTCGCCTCCATCAACAGTTTGAACCTCTC------------CTCCTT
GATGTTCGAGTGCTTCACACATGCCTC--ATCCTTCTTCGCCAAGATATCTTCGAACCTCTCTGTTAGCTTGGTCGTCGC
ACCTTCTCGCTTCACCCTCTTCTCCTCCCACTTCTTC-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
------------------------------S-----------------------------------SS------------
---------------------------------------------------S----------------------------
-------------------------------SS-------S--------------------S---S-----------S--
--------------------------------------------------------------------------------
--S---------------------------S---------------------------S----SS-----S--SSSSSSS
SS-SS---S-SS-------------------------------------S-S-S-S-----S--SS--S-SS--S-S-S-
SSS------------S-----S--S--SSSS---S-----S---------------------S----------S------
------S---------------------S-------------------------------------SSS--------S--
--------------------------------------------------------------------S---S-------
--------------------------------------S----------------------------------S------
--------------------------------------------------------------------------------
----------------------------------------------SSSSS-----S-----------------------
-------------------------------------------------------------S------------------
-----------------------------------------------S--------------------------------
--S-----------SSSS--------------------------------------S-----------------------
--------------------------------------------------------------------------------
---------------S--------------------------------------------------------------S-
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
------S-----------------------------------------S------------------S------------
-----S--------------------------------------------------------------------------
--------S--------S---------------S--------S--S-S--------S-SS----S-S--S----------
----S----S----S--SS-SSSSSSSSS-SSSS-SS--------S----S-S-S----------S--SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S-S-SSSSS---------------------------------
---S----------------S---------S------S------------------------------------S-----
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
------------------------------------------------------------------S-------------
S--------S----------------------------------------------------------------------
---------------S------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------S-------------------------------------------------S---------------------
---S------------------------------S-----SS-S-----------------------S------------
----S----S------------SS---------S--S-----------S------------S-----------S------
------S---------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_794
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AAAGGATGACCAGCTGACCG------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_2910
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------GGAGTCCTGGACTAAGGGGT-------------------------------
-------------------------------------------
