>input_sequence_69520
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--------------------------------------------------------ATGGCTACATCAGAACCGGTACAG
GAAAGCTGGGAGCTGGAACCCAGTAGGCCTCGGGTCCTCCTTGCTGCTTCAGGGAGTGTAGCTGCTATAAAATTCGAGAG
CCTCTGTCGTGTCTTCTCCGAGTGGGCGGAAGTCCGAGCTGTGGCGACCAAGTCATCATTGCACTTTATTGAGAGATCAT
CTCTGCCTAGCGACGTCATTCTTTACACTGATGATGATGAGTGGTCTACCTGGACGAAGATAGGAGACGAGGTTCTGCAC
ATAGAGCTGCGGAAGTGGGCAGACATCATGGTGATCGCCCCCTTATCAGCAAACACTCTGGCCAAGGTCTGTAATCTCTT
CTTCCATGAACCGTTAGATTCGATGTCGCATCCCTGAATCAGTTAAGAGAACAGCAAGCTGCTCTTGTCCCAGCACAAGC
TGACATTTCATTAGTTTCACAGATCGCTGGTGGGTTATGCGACAACCTCCTGACATGCATAGTGCGGGCGTGGGACTACA
AGAAGCCGATCTTCGCCGCTCCAGCCATGAACACCTTCATGTGGAACAACCCGTTCACGGCGCGCCACATCGAGACGATC
AACCAACTCGGGATTTCCTTGGTCCCACCCACCACGAAGAGGCTGGCCTGCGGCGACTACGGGAACGGCGCGATGGCTGA
GCCTTCACAGATCCATACGACCGTGAGGCTCGCGTGCAAGTCACATACGTTCGGCACGGGCAATTCACCCGCGATCCCTT
CCAGCAGCCACCCTGTCTAG------------------------------------------------------------
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>chr7A_1_TraesCS7A01G162200
CTGACTTCTGTGGTAACTTGCCACGATGATCGTGGATGTGCAATCACAGCCACCACAACTTTGATAGTCTTGGTTAGCTT
TGCTAAGTT-CTGGTTACC--AGAATTCCTTATTAATTTTAGAAACTTGAATCATACCAACAATATCTTTGATGGTTTCA
TGCCATGCATCCATCATTGACTTGATGAGAGTACGAAAGTCCCAGCATCTCCAGCAACCATCAAGAGTCAACCACACTCA
GCCAAATACTGCAAACTGTAGAAAATGCCAAATTGTTAATTATGACGACTAGCATTGGAGCCCAAATGTCAATATGGTAA
AATTGTAGAAAGGAAACAACAAGTTCCATCCGCATGGTGTTCTTGTGTGTGTGAAAAATAACCCAGGAAATGCTAGATGC
AACTTCCTTATTTGGACATGAGCTTCTGAAGTAGCTGAAACATGGTAGCGTTGGATTTATTTCGTAACATAAAC-CTGGG
AAATCCGACAATTATCATACAGGAACTTGTGAATGCATGTACACATTTGGTCTTCAGATACAGAATGTATGCTATATTGA
TAGTAACATCAGGTGTCAGATTATTAGTTTGATTATCTCGTGTTACCTTGCCGTTCCAGTGTCTACTTCTCTCAAAT-GT
ACATTTGACCCTATTAGAAGATGTAAATGATGAATTCGAGCTATTAATTATGTTTTTATGGATGTGAATGTGTTCCCGCA
TG--------CAGTGCAACCAAACTGCAC--CAGTCAGACCGACAATACTTAATTTCTGTGTTGATGATAAAACAGATGA
AGACGTATCATTCTCTGAGCGATACTAGATATATTTCAGGGCCGCTTGAATTTTGGGACAACACAA-ATATTGTTTGCTT
CTTCGGAACGATTTTTCCTCTTGATTTTCTTTATTTTGATTCCAGAGTATGCACTGTGGATCATGTTTTCCTGTACCAGC
ATAAATCCTCTGAATACCTGTAATTCAAATGCAGTTGAGCAATCCAAGTGAAGCAGATGGCTACATCAGAACCGGTACAG
GAAAGCTGGGAGCTGGAACCCAGTAGGCCTCGGGTCCTCCTTGCTGCTTCAGGGAGTGTAGCTGCTATAAAATTCGAGAG
CCTCTGTCGTGTCTTCTCCGAGTGGGCGGAAGTCCGAGCTGTGGCGACCAAGTCATCATTGCACTTTATTGAGAGATCAT
CTCTGCCTAGCGACGTCATTCTTTACACTGATGATGATGAGTGGTCTACCTGGACGAAGATAGGAGACGAGGTTCTGCAC
ATAGAGCTGCGGAAGTGGGCAGACATCATGGTGATCGCCCCCTTATCAGCAAACACTCTGGCCAAGGTCTGTAATCTCTT
CTTCCATGAACCGTTAGATTCGATGTCGCATCCCTGAATCAGTTAAGAGAACAGCAAGCTGCTCTTGTCCCAGCACAAGC
TGACATTTCATTAGTTTCACAGATCGCTGGTGGGTTATGCGACAACCTCCTGACATGCATAGTGCGGGCGTGGGACTACA
AGAAGCCGATCTTCGCCGCTCCAGCCATGAACACCTTCATGTGGAACAACCCGTTCACGGCGCGCCACATCGAGACGATC
AACCAACTCGGGATTTCCTTGGTCCCACCCACCACGAAGAGGCTGGCCTGCGGCGACTACGGGAACGGCGCGATGGCTGA
GCCTTCACAGATCCATACGACCGTGAGGCTCGCGTGCAAGTCACATACGTTCGGCACGGGCAATTCACCCGCGATCCCTT
CCAGCAGCCACCCTGTCTAGCCGATGCAG---T-GGTCGATATGTTCACTTCAGGTGTTCAAGAGCTTAGTGTTTCGCGT
TTTCTGTGCCGGCCCATGTCTGGGTGTAAGGAGTGGAGAGTATCATCAGGTGTTTGTTTGTCGGTGATGTCTGTGTTAAC
CAACGTGTCGTACCTATGGAACATGGATCAGTATATTTGTTACTGTACTAGAGA-TG-----------------------
-------------------------------------------------------------TTAGGGCGTAGAGATTCAG
GAAATG----TTGTTCCAGCCATA-----ATGTTATGTTATCTGTGGATGAATCTGCTTCCGTCGTTG---TTCTGAATT
TTACTGTGATGGTTTGCAAATG--ACCCCAGCTGGGACTCATCAGCAAGAGGCAAAATTCTCTTTCCCCATTTTGGTGCT
GGACA-------CTGCACGTCTGCACTATCAGGATCGGAACAATGTGAGAATGTGACGTGGCGCAAGAAAGTGCTCTGGT
GAATCAGAAGCTGTGACTGGGCAACAAGATAAGATAAGTCCAAATCCAGATAAGCATCAGGTGGAGGTTGCGGGTTCAGT
TCAGTCACCGTCGTGGCCTTCTTGCTACTCCTTAGTTGCTAC----------------------CACCAGTAACAGGAAC
GTTTTGGTTTCGTAGCCC--ACAAGACCACACGGGTTGTGGTAGAGAGATGAATGGTTGGTGCAGTGTTGACGCGTCTGG
ATAAACGGATAATCGTGTCCGCTCCAGCGCGTCAGAATTTCGTA-TTTTGCGAGTAAATGAAACTCCAAGAAAATGCAGT
GAAGTGGCGGCCATGGAATTATAGTTGGAACATTTCAACCAAAATCCGT--GAAAGAGAGAGAGAGAGAGAGAGAGGGGC
CTTT-----TGAGGTGTTTTGCGGCGTAGAAAATTCCGAATCACAACTAAATGATGAACCTGATAAACCCTCAAATAATA
ATAAAAAAACCAACTTAAGGGCTAATCCTCGTTGACATTTTTATAGAAGAAACTCCACAAGCATCATATGTCCGAGTCGG
GATTCGTACTCAGATGGGCTGGCAGCAATCTCAGCTGCCCAG
>chr7D_2
-TGACTTCTGTGGTAACTTGCCACGATGATCGTGGCTGTGCAATCACAACCACCACAATTTTGT----------------
--CTTAGTTCCTAGTGAAC--AGAGTTCTTTATCAGTTTTAGACACTTGAATCATACTAACAATATCTTTGATAGTTTCA
TGACATGCATCCATGAATGACTAAATGAGAGTATGAGAATCCCAGCGTCTCCAACAACCATTAAGAGTCAACCTAAGTCA
ATCAAATAGTGCAAAATGTAGAAAAGGCCAAATTGCTAAGTATGGTGACTAGCATTGGAGCTCAAATGTCAAT--GGTAA
AATTGTAGAAAGGAATCAACAAGTCCTAGCCGCATAAC------------------------------------------
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---------------------------------------------TTTGGTCTTCAGATACAGAATGTGTGCTATAATGA
TAGTAACATCAGGTTTCAGATTATTACTTTGATTACCTCATATTGCCTTACCATTCCAGTGTCTACTTCCCTCAAATAGT
ACATTTGACCCTATTAGAAGATGTAAATGATAAATTGGAGCCGTTGGTTATGTTTTTAAGGATGTCAACGTGTTCCCTCA
TG--------CAGTGCAACCAAACTGCACCTCAGTCAGACCGACAACACTTAATTTCTGTGTTGATGAT--TACAGATGC
AGACGTATCATTCTCTGAGTGGTACTAGATATATTTCAGGG-CGCTTGAATTTTGGGACAACATAACATATTGTTTGCAT
CTTTCAAATGATTTTTCTTCTTG---------ATTTTGATTCCAGAGTGTGCACTGTGGATCATGTTTTCCTGTACCAGC
ATAAATCCTCTGAATACCTGTAACTCAAATGCAGG---GCGATCCAAGTAAAGCAGATGACTACATCAGAACCGGTACAG
GGAAGCTGGGAGCTGGAACCCAGCAGGCCTCGGGTCCTCCTTGCTGCTTCAGGGAGTGTAGCTGCTATAAAATTCGAGAG
CCTCTGTCGTGTCTTCTCCGAGTGGGCGGAAGTCCGAGCTGTGGCCACCAAGTCATCATTGCACTTTGTTGATAGATCAT
CTCTCCCTAGCGACGTCATTCTTTACACTGATGATGATGAGTGGTCTACCTGGACGAAGATAGGAGACGAGGTTCTGCAC
ATAGAGCTGCGGAAGTGGGCAGACATCATGGTGATCGCCCCCTTATCTGCAAATACCCTGGCCAAGGTCTGTTGTCTCTT
CTTCCATGAACCGTTAGATTCGATGTTGCATGCCTGAATCAGTTAAGAGAACAGCAAGCCGCTCTCGTTCCAGCACAGAC
TGACATTTCATTAGCTTCACAGATCGCTGGTGGGTTATGCGACAACCTCCTGACGTGCATAGTGCGAGCATGGGACTACA
AGAAGCCGATCTTCGTCGCGCCAGCCATGAACACCTTCATGTGGAACAACCCGTTCACGGCGCGCCACATCGAGACGATC
AGTCAACTCGGCATTTCCCTGGTCCCGCCCACCACGAAAAGGCTGGCCTGCGGCGACTACGGAAACGGCGCGATGGCTGA
GCCCTCGCAGATCCACACGACCGTGAGGCTCGCGTGCAAGTCGCAGACGTTCGGCATGGGCATTTCGCCTGCGAACCCTT
CCAGCAGCCGCCCTGTCTAGCTGATGCGATGATGGGTCAGTGTGTTCAGGTGTTTAT-------GCTTAGTACTTGAGTT
CTTCTGTGCCGC-------------------------------CAACATCTGGGTGTTTATCGGCGATGTCTGTATTGAC
CCAACATGTAGTACCT------ATGGATCAGCATATTTGTTACTGTAGTAGATGTTACTCCCTCCGTCCCATAATATAAG
AGCGTTTTTTACACTAGTGTAGTGTCAAAAATGCTCTTATATTATGGGACAGAGGTACTTATTAGGCCATAGAGACTGAG
GAATTGATG-TTATTCCAGCCACAGTGTTATGTTATGTTATCTATGGATGAATCTGCTTCCGTTGTTTCTCTTCTGAATT
TTACTGGGATGCTTTGCAAATG--ACTCCAGCTGGAACTCGTCGGCAAGAGGCAAAATTCTCTTTCTCCATTTTGGTGCT
GGACA-------CTGCACGTCTGCACTGTCAGGATCGGAGCATTGTGTGAACGTGACGTGTCCCGGCAAAGTGCTCGGGT
GAATCAGAACCTGTGACCAGGCAACGAGATAAGATAAGTCCAAATCCAGATAAGCATCAGGTGGAGGTTGCGGATTCAGT
TCAGTCACCGTCTTGGCCTTCC--------------TGCTAC----------------------CAGCAGTAACAGGGAC
GTTTTGGTTTCGTAGCCCCCACAAGGCCACAC-GGTTGTGGTAGAGAGATGAATGGTTGGTGCAGTGTTGACTCGTCCGG
ATAAACGGATAATCGTGTCCACTCCAGCGCGTCAGAACTTCGTATTTTTGCGAGTAAATGAAACTCCAAGAAAATGCAGG
AAAGAGGCGGCCATGAAATTATAGTTGGAATATTTCAACCAAAATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGC
CTTTGAGTTTGAGGTGTTTTGCGGCGTGGAAAATTCCGAATCGCAAATAAATGGTGAACCTGATAATTGCCCAAATAATA
AAAACAAAA-----------------------------------------------------------------------
------------------------------------------
>chr7B_2
-TGACTTCTGTGGTAACATGCCACGATGATCGTGGCTGTGC-------ACCACCACAACTTTGATAGTCTTGGTCAGCGT
TGCTTAGTTCCTTGTGAGTCAAGAATTCCTTATCAATTTTAGACACTTGAATCATACTAAAAACATCTTTGATGGTTTCA
TGCCATGCATCCATGAATGACTCAATGAGAGTATGAGAATCCCAGCGTTTCCAGCAACCATCAAGAGTCAACCAAACTCA
CCCAAATTGTGCAAATTGTAGACAA-GCCAAATTGCTGAGTATGGCGACTAGCATTGGAGCCCAAATGTCAATGTCATTG
CA--GTACAGAAGAAACAATTAGTCCCATCCGCATGGTGTTCCC--GTGTGTGAAAAGTAACCCAGTAAACGCTAGATGC
AGCTTCCGTA-TTGGACATGAGCTACTGGAGTAGCTAAAACATGGTAGCTTTC-ATTTATTTCGCAACATAAAATCTGGG
AAATTAGATAATTATCATACTGGAACTTGTGAATGCAT------------------------------------------
--GTAACACCAGGTTTCAGATTATTAGTTTGATTATCTCGTATTGCTTTGCCATTCCAATGTCTACTTCTCTCAAAT-GT
ACATTTGACCATATTAGAAGATGTAAATGATAAATTGGAGCAGTTAGTTATGTTTTTAAGGATGTCAATGTGTTCCCTCA
TGCTGTCATGCAATGCAACAAAACTGCACCTCAGTCAGACTGACAACATTTAGTTTCTATGTTGATGAT--AACAGATGC
AGACGTATCGTTCTCTGAGTGGTACTAGATAAATTTCAGGGACACTTGAATTTGGGGACAACATAACATATTGTTTGCTT
CTTTCAAATG-TTTTTCTTCTTGAATTTCTTTATTTTGATTCCAGAGTGTGCACTGTGGATCATGTTTTCCTGTACCAGC
ATAAATCCTCTGAATACCTGTAACTCAAACGCAGG---GCGATCCAAGTAAAGCAGATGACTACATCAGAACCGGTACAG
GAAAGCTGGGAGCTGGAACCCAGCAGGCCTCGGGTCCTCCTTGCTGTTTCAGGGAGCGTAGCTGCTATAAAATTCGAGAG
CCTCTGCCGTATCTTCTCCGAGTGGGCAGAAGTCCGAGCTGTGGCCACCAAGTCATCATTGCACTTTGTTGATAGATCAT
CTCTGCCTAGCGACGTCATTCTTTACACCGATGATGATGAGTGGTCTACCTGGACAAAGATAGGAGACGAGGTTCTACAC
ATAGAGCTGCGAAAGTGGGCAGACATCATGGTGATCGCCCCCTTATCAGCAAACACCCTGGCCAAGGTCGGTTGTCTCTT
CTTCCATGAACCGTTAGATTCGATGTTGCACCCCTGAATCAGTTAAGAGAACAGCAAGCTGCTCTTGTCCCAGCACAGAC
TGACATTTCATTAGCTTCACAGATCGCCAGCGGGTTATGCGACAACCTCCTGACGTGCATTGTCCGAGCATGGGACTACA
AGAAGCCGATCTTCGCCGCGCCAGCCATGAACACCTTCATGTGGAACAACCCGTTCACGGCGCGCCACATCGAGACGATC
AACCAACTCGGCATTTCCCTGGTCCCGCCCACAACGAAGAGGCTGGCCTGCGGCGACTACGGAAACGGCGCGATGGCTGA
GCCCTCGCAGATCCACACGACCGTGAGGCTCGCGTGCAAGTCGCAGACGTTCGGCATGGGCATTTCGCCTGTGAACCCTT
CCAGCAGCCGCCCTGTCTAGCTGATGCGATGAT-GGTCACTATGTTCAGGTGTTTAT-------GTTTAGTACTTGAGTT
-TTCTGTGCCGC-------------------------------CCACATCTGGGTGTTTATCGGTGATGTCTGTACTGAC
CCAACATGTAGTACCT------ATGGATCGGCATATTTGTTACTGTAGTAGATGTTA-----------------------
-------------------------------------------------------------TTAGGGCATAGAGACTGGG
GAGATGCTGGTTGTTCCAGCCATA-----ATGTTATGCTATCTATGGATGAATCTGCTTCCGTT---------CTGATTT
TTACTGTGATGGTTTGCAAATGTGACTCCAGCTGAGGCTCGTCAGCAAGAAGCGGAATTCAGTTTCTCCGTCTTGTGGTG
GACACCTGCAGTCTGCACGTCTGCACTGTCAGGATCGGATG---GTGCGAATGTGACGTGGCGCGAGAAAGTGCTCTGGT
GAATCAGAACCTGTGACCAGGCAACAAGATAAGATAAGTCCAAATCCAGATAAGCATCAGGTGGAGGTTGCGGATTCAGT
TCAGTCACCGTCCTGCCCTTCT--------------TGCTACTCCTAGTTGCCTACCAGCACTACACCAGTAATAGGGAC
GTTTTGGTTTCGTAGC----------------------------------------------------------------
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>SNPs
S----------------------------------S------------S-------------------------S---S-
----S-------S--S-S---------------S---------S-------------S----------------------
--------------S-S-----SS---------S--S-S-------S---------------------------S-----
S-------S------S---------S---------S---S----S----------------------------S------
------------------------S-----------------SSSS-----------S--------S---S---------
-S-----S--S-------------S---S-------S------------S--SS----------S--------S------
----SS--S-----------S-----------------SSSSSSS-----------------------S-------S---
--------------S--------------------------S--S-------S---------------------------
-------------------------------S----S----SS---S-----------S------S-----------S--
----------------------------------------------S----------------------SS--------S
-------------------S-S-------------------S---------------------S----------------
---SSS--S--------S------S-----------------------S-------------------------------
-----------------------S----------SSSS--S--------S---------S--------------------
-----------------------S--------------------------------------------------------
---------------------------------------------S---------------------S----S-------
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--------------------------------------------------------S---------------SS------
--------------------------S--------------------------------------------------SS-
--------------S---------------------------------------S-----------S--S----------
-------------------S------------------------------------------------------------
-----------S------S-------S-----------------------------------S-----------------
---S--S--------S--------------------------S--S----------S-----S---S--S----S-----
---------S-----------S-----SS---------SS--------SS-SSSSSSSSSSSSS-------SS--SSSS-
S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--SS--SS-----S--------------S--S--
-S-SSSSSSSSSS-SSSSSSSS---------S---------------S----SS--S-----------------------
--------------------------------------------------------------------S------S-S--
-------------------------------------------S-------------------S---S------------
--------------------------S-------------S-------------------------S-------------
---------------------------S-----------S--S----S----------------S---------------
---------S-------SS------------------------------------------------------S------
------------S---------SSSSSSSSSSSSSS-----------------------------------------S--
-------------------------S------S---------------------------------------S----S--
--------------------S----------------S-----------------------------------------S
S---S----------S--------------S---------------S-S----S----------------------S---
---------------------------S--------------S---S------S------------SSS-S---------
-S--S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_365
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-------------------------CCATCCGCATGGTGTTCTTG-----------------------------------
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>reverse_2227
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------------------------------------------------------------------CCCATTTTGGTGCT
GGACAC--------------------------------------------------------------------------
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