>input_sequence_69498
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----------------------ATGGAGGAGTACTCAGCGTCCTCCTCCCAGCGCGGTGGCGGTGGCGGCCGCGGGGAGC
TGCAGGGCCCGCGCCCGGCGCCGCTCAGGGTCCACAAGGACTCGCACAAGATCAAGAAGCCGCCCGCCTCGCAGGTGCGG
CAGCCGGTCATCATCTACACGGTGTCGCCCAAGGTCGTGCACGCCAACCCCGGCGAGTTCATGTCCGTCGTGCAGCGCCT
CACCGGCGCCTCCTCGTCATCCTCCTCACTCCCGCCGCCGCCACAGCCGTCGCTCCCGTTCCCGTTCTTCCCCCAGCAGT
CCTCGTCCTCCATGCTCCCGCCGGCGTTACCGCAAACGCTGCCGTTCCCGTTCCAGCTCCA---AGCATCTGGGCCGCAG
GCGCACGAGGGCGCGCTGCTGCAGCATCAGCACTCGCCTGCCGCGCGCCTCGCCGCATTCGAGCAGGCGTCGGCGCCGGC
CGGACGGAGTACCGGTGTTCATCGTGGAGGGCTCCCGCCGCTGCCGGGCATCCTATCTCCGGTTCCGGGATCTCTCCCGG
CGATCCCGCCGGGCTTCTTCTCTCCGCCGCCCGGCGGAGCTGGCGGTGGCATCAACCTGTTCGGCGAGCTGATCAGCCCG
GCATTCCATGGCCACGGCGCGTTAACTGGC---ACCACCGCCGGTGCAAGTCCTACACCAATGTCGTTACAGTATTTCCC
AGCTGCAGCTGCGCCGTCGCCGTCGACCCCCTACTATTGGGATCTCTTCAACAACGACCCAAACCACCTATAA-------
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>chr7D_1_TraesCS7D01G323700
AGACTGGCTCAAGTCAGAATCTGCGCAGGTAGATCCATCGAT-----GCATATTCCAGCAGATACATTTAATCTAGCTAG
CTACATGCATGGGCCCGTTGCTCCACCTCTGCACTTTCATAATCCTGCAACAACACACCTTCGAATCAAAAATTCCTAGC
-------TAGCTAGGTTACAAAATACCTAGAGTATCTGCAATAAGTTAACTCTTAGTTTAGCTAAAT--GAAATTTGCAC
CTCACCAACCGCCACTGATAAAACACTATAATAATCAACCGTTGTTTAAGTCCATGCCCGACTAATCCTGGAAAATCCTG
CAGTTACGGTCAAAAAAACTAATCCTGGAAAATACGGATTAAATATTAATGAACCGTGGAAGCTTCTTCTGTTCTTGGAG
CTAGAGAACGACAGAGCAACCAGCCTCAATATACGTACACA--------------TCGAGAGACATGAATATATCTGACC
CGGTTCTTCGGTCGTCAGTGCCAGTCAAATCTCAGATAGACAAGAAACAGAGGGGGATTGCACCGCAGCAATCCGGAATT
TGGCGCCTTCCCATGCATGCGTGCGTCACGTCCGTCACCTTTTGGCTGCCTTGCTTGGACGTGTTCAAACTTCAAAGTTA
CGTAGTGAGA-GGCGAAAAAAAGGCTTCTTTATA----------------------------------------------
------------------------------------------------------TGATATTGCAATCGAATGCTTTCTTG
ACCTATTACACGCCCATAATTCGCAGTATCAAATCCTAATGAATCCTACTTTTTTAGTAGTTTTTTCGTCTCCCTGCTCC
CAGTCCATCCCGAACTTGGT----CGCCGTCGTGGCTGATCTCCTTTCAGCTGCCACCTCTATATATACATGGCTCCACT
AGAGA-----GGAGAGGAGACACGCACGTACTACTGCTGCTCAACTTTGACACTTGAAGAACGTTTCTCACTAACGCATC
GGTCGATCCATCTCTGCTTTCGGTTCAACGCCGGCCGGCGACGTCGACCAGCTATCTATCTAGCTAGCGAGCTCGTGGCA
TCGA----TCGATCGATCGAACATGGAGGAGTACTCAGCGTCCTCCTCCCAGCGCGGTGGCGGTGGCGGCCGCGGGGAGC
TGCAGGGCCCGCGCCCGGCGCCGCTCAGGGTCCACAAGGACTCGCACAAGATCAAGAAGCCGCCCGCCTCGCAGGTGCGG
CAGCCGGTCATCATCTACACGGTGTCGCCCAAGGTCGTGCACGCCAACCCCGGCGAGTTCATGTCCGTCGTGCAGCGCCT
CACCGGCGCCTCCTCGTCATCCTCCTCACTCCCGCCGCCGCCACAGCCGTCGCTCCCGTTCCCGTTCTTCCCCCAGCAGT
CCTCGTCCTCCATGCTCCCGCCGGCGTTACCGCAAACGCTGCCGTTCCCGTTCCAGCTCCA---AGCATCTGGGCCGCAG
GCGCACGAGGGCGCGCTGCTGCAGCATCAGCACTCGCCTGCCGCGCGCCTCGCCGCATTCGAGCAGGCGTCGGCGCCGGC
CGGACGGAGTACCGGTGTTCATCGTGGAGGGCTCCCGCCGCTGCCGGGCATCCTATCTCCGGTTCCGGGATCTCTCCCGG
CGATCCCGCCGGGCTTCTTCTCTCCGCCGCCCGGCGGAGCTGGCGGTGGCATCAACCTGTTCGGCGAGCTGATCAGCCCG
GCATTCCATGGCCACGGCGCGTTAACTGGC---ACCACCGCCGGTGCAAGTCCTACACCAATGTCGTTACAGTATTTCCC
AGCTGCAGCTGCGCCGTCGCCGTCGACCCCCTACTATTGGGATCTCTTCAACAACGACCCAAACCACCTATAAATGCATC
TGCAAGACTGCGTGTGGTCAGCAAGTTACACGCGTGGCTACTACTCCATATAGTACGTATAT--------GATCGATTGA
TTTCCATTTCCATGCATATGCGTCGCC-------GTCTGACAGAATTAGTAG-TTTTTTGGGGGAGAGAAACATGATTAG
TAGCTATCTTATACATTTGGCATT-GATGAGATGTGATAGGAGCGAAGACATTAAGAGCAAGTTAGATCG-------ATA
GATAGGCTAAGTCAGCTGGTACTGCTCATTACCCGCA----TGCTAGCTGCAACGAAGCTTCATCCAAGCTAGCAAGCTC
GTGTCTGCTCTGCTACCTTAGTCAGCTGGTATATGTTTGCACCCCAACTT----TGGAGGTGATCGATGATAGAGAATTA
GACAGAGATCATATGGAAGACTCTCAACTGATGTATATTCATTATTTCTTATACATAATTAAAGATAGACATAAATAATG
CTCAGTGCTAGTATGCCATTCATTTGTAACAGAAATGGGATTGATTTTCTATAATTAATAATCCTCGTGGTTTTCATAAA
GTAATTACCTCATGTTTACGCGTGCATGATCACGATTGATTGATATATTCTTGGAGCATCTCTAGCCGATCACATTATAA
TTTAGCCCCTTACATCTTAACTCATTATATTTGATCAGCTAAAAAATGGTTCTTAGTCGAACCCCTAAAACTTAACTCCC
TAAAAGAAACATTTGCCAATTCTTCTTAGCTTCTGTATA--CACACTAAATTTCAACTACATATTTGCACACATATTAAA
TTAGAATTTAATAATCAAAGTTCACACAATTCACAAATATTATAATTAAT-TTTAAGTTCATAAATCAAATTATTATTCA
AATTGAAACACACGAAAGGGTCCAAATGAAGTAAAGAGCATGATAGAAGCACAACAATCAAGTGGTGCTATCGAGTTGCT
ACTAATGCTCAGCACGATCATCTTGGAGCTGGGTATGAACTTCTCGGTTCGCGATGCTTCGCCGTGTG
>chr7A_1
AGACTGGCTCAAGTCAGAATCTGC--AGGTAGATCCATCGATATGATGCATATTCCAGAAGATACAGTTAATCTAGCTAG
CTACATG----GGCCCGATCCTTCACCTTTGCACTTTCATAATCCTGCAACAACACATGTTCGATTCAAAAATTAATCAA
AGCCGCTTAGCTAGGTAACAAA-TACCGAGAGTATCTGGAATATGTTAACTCTTAGTTTAGCTATAAGCGAAATTTGCAC
CTCACCAACCGCCACTGATAAAACACTATAATAATC-ACCGTTGTTCAAGTCCATGCCCGACTAATCCTGGAAC------
-------------------------------ATACGGATTAAATATTAATCAACCGTGGAAGCTTCTTCTGTTCTTGGAG
CTAGAGAACGACAGAGTAACCAGCCACAATATACATACACA--------------TCGAGAGACATGAATATATCTGACC
CGGTTCTTTGGTCGTCAGTGCTAGTCAAATCTCAGATAGACAAGAAACAGAGGGGGATTGCGCCGCAGCAATCCGGAATT
TGGCGCCTTCCCATGCATGCGTGCGTCACGTCCGTCACCTTTTGGCTGCCTTGCTTGGACGTGTTCAAACTTCAAAGTTA
GCTTGTGAGAGGGTGAAGAAAAGGTTTCTTTATA----------------------------------------------
------------------------------------------------------TGATATTGCAATCGAGTGCTTTCTTG
ACCTATTACACGCCCATAATTCGCACTATCAAATCCTAATGAATCCTACTTTTTTAGTAGTTTTTGCGTCTCCCTAT---
---TCCCTCCCGAACTTGGT----CGCCGTCGTGGCTGATCTCCTTTCAGCTGCCATCTCTATATATACATGGCTCCACT
AGAGAAGAGAGGAGAGGAGACACGTACGTACTACTGCTGCTCAACTTTGACACTTGAAGAACGTTTCTCACTGACCGATC
GGTCGATCCATCTCTGCTCTCGGTTCAACGCCGGCCGGCGACGTCGACCAGCTATCTAGCTAGCGAGCGAGCTCGTGGCA
TCGGTCGGTCGATCGATCGAACATGGAGGAGTACTCAGCGTCCTCCTCCCAGCGCGGTGGCGGTGGCGGCCGCGGGGAGC
TGCAGGGCCCGCGCCCGGCGCCGCTCAGGGTCCACAAGGACTCGCACAGGATCAAGAAGCCGCCCGCCTCGCAGGTGCGG
CAGCCGGTCATCATCTACACGGTGTCGCCCAAGGTCGTGCACGCCAACCCCGGCGAGTTCATGTCCGTCGTGCAGCGCCT
CACCGGCGCCTCCTCGTCATCCTCCTCACTCCCACCGCCGCCACAGTCGACGCTCCCGTTCCCGTTCTTCCCGCAGCGGT
CGTCGTCTTCCATGCTCCCGCCGGCGTTGCCGCAAACGCTGCCGTTCCCGTTCCAGCTCCAGCAAGCATCTGGGCCGCAG
GCGCACGAGGGTGCGCTGCTCCAGCATCAGCACTCGCCTGCCGCGCGCCTCGCTGCCATCGAGCAGGCGTCGGCGCCAGC
CGCACGGAGCACCGGTGTTCATCGTGGAGGGCTGCCGCCGCTGCCGAGCATCCTGTCTCCGGTGCCGGGATCTCTCCCGG
CGATCCCACCGGGCTTCTTCTCTCCGCCGGCCGGCGGAGCTGGCGGTGGCATCAATCTGTTCGGCGAGCTGATCAGCCCG
GCATTCCATGGCCACGGCGCGCTAACCGGC---ACCACCGCCGGTGCAAGTCCTACACCAATGTCATTACAGTATTTCCC
CGCTGCAGCTGCGCCGTCGCCGTCGACCCCCTACTATTGGGATCTCTTCAACAACCACCCAAACCACCTATAAATGCATC
TGCAAGACTGCGTGTGGTCAGCTAGTTACACGCGTGGCTACTACTCTATATAGTACGTATATCGGTATATGATCGATTGA
TTTCCATTTCCATGCATATGCGTCGCC-------GTCTGACAGAATTGGTAG-TTTTTTAGGGGAGAGAAACAGGATTAG
TAGCTATCTTATACATTTGGCATT-GATGAGATGTGATAGGAGCGAAGACATTAAGAGCAAGTTAGATAG-------ATA
GATAGCCTAAGTCAGCTGGTACTGCTGATTACCCGCA----TGCTAACTGCAACGAAGCTTCATCCAAGCTAGCAAGCTC
GTGTCTGCTCTGCTACG-TAGTCAGCTGGTATATGTTTGCACCCCAACTT----TGGAGGTGATCGATGATAGAGAATTA
GATAGAGATCATATGGAAGACTCTCAACTGATGTAT--TCATTATTTCTTATACATAATTGAAGATAGACATACATAATG
CTCAGTGCTAGTATGCCATTCATTTGTAACAGAAGTGTGATTGATTTTCTATAATTAATAATCCTCGTGGTTTTCATAAA
GTAATTACCTCATGTTTAAGCGTGCATGATCACAATTGATTGATATATTCATAGAGCATCTCTAGCCGATCACCTTATAA
TTTAGCCCCTTACATCTTAACTCATTATATGTGATCAGCTAAAAAATGGTTCTTAGCCCAATCCCTAAAACTTAACTCCC
TAAAA-AAACATTTGCCAATTCGTCTTAGCTTCTGTATATACACACTAAATTTCAACTACATATTTGCACACATATTAAA
TTACAATTTAATAATCAAAGTTCACACAATTCATAAATATTATAATTAATATTTAAGTTCATAAATCAAATTATTATTCA
AATTCAAACACACAAAAGGGTCCAAAAGAGCAC---------ATAGAAGCACAACAATCAAGTGGTGCTATCGAGTTGCT
ACTAATGCTCAGCACGGTCATCTTGGAGTTGGGTATGAACTTCTCGATTCACAATGCTTCGCCGTGTG
>chr7B_1
AGACTGGCTCAAGTCAGAATCTGC--AGGTAGATCCATCGAT-----GCATATTCCAGAAGATACAGTTAATCTAGCTA-
-------CAGGGGCCCGTTCCTCCACCTTTGCACTTTCATAATCCTGCAACAACACACCTCCGAATCAAAAATTAATCGA
AGCCTCTTAGCTAGGCTACAAA-TACGGAGAGTATCTGGAATATGTTAACTCTTAGTTTAGCTATAAGCGAAATTTGCAC
CTCACCAACCGCCACTGATAAAACACTACAATAATCAACCGTTGTTTAAGTCCATGCCCGACTAATCCTGGAA-------
------------------------------AACACGGATTAAATATTAATCAACCGTGGAAGCTTCTTCTGTTCTTGGAG
ATAGAGAACGACAGAGCAACCAGCCGCAATATACATACACAAACACAATCGAGACTCGAGAGACATGAATATATCTGACC
CGGTTCTTCGGTCGTCAGTGCTAGTCAAATCTCAGATAGGCAAGAAACAGAGGGGGATTGCACCGCAGCAATCCGGAATT
TGGCGCCTTCCCATGCAAGCGTGCGTCACGTCCGTCACCTTTTGGCTGCCTTGCTTGGACGTGTTCAAACTTCAAAGTTA
GCTAGTGAGA-GGTGAACAAAAGGTTTCTTTATATGATCAAAAATGCTAGACATACAAAGATTTGTAAAAGCCTGTAAAC
TATTTTCATCTAACAACCAATCACAAACCTCTTACCCCCTGATTTTCCGTTATATGATATTGCAATCGAGTGCTTTCTTG
ACCTGTTACACGCCCATAATTCGCAGTATCAAATCCTAATGAATCCTACTTTTTC--TAGTTTTTTCGTCTCCCTGCTCC
CAGTCCATCCCGAACTTGGTCGCGCGCCGTCGTGGCTGATCTCCTTTCAGCTGCCACCTCTATATATACACTGCTCCACT
AGAGAGGAGAGGAC-----ACACGTACGTACTACTGCTGCTCAACTTTGACACTTGAAGAACGTTTCTCACTGACCCATC
GGTCGATCCATCTCTGCTTTCGATTCAACGCCGGCGGGCGACGTCGACAAGCTATCTAGCTAGCTAGCGAGCTCGTCGCA
CCGA----TCGACCGATCGATCATGGAGGAGTACTCAGCGTCCTCCTCCCAGCGCGGTGGCGGTGGCGGCCGCGGGGAGC
TGCAGGGCCCGCGCCCGGCGCCGCTCAGGGTCCACAAGGACTCGCACAGGATCAGGAAGCCGCCCGCCTCGCAGGTGCGG
CAGCCGGTCATCATCTACACGGTGTCGCCCAAGGTCGTGCACGCCAACCCCGGCGAGTTCATGTCCGTCGTGCAGCGCCT
CACCGGCGCCTCCTCGTCATCCTCCTCACTCCCGCCACCGCCACAGCCGTCGCTCCCGTTCCCGTTCTTCCCGCAGCAGT
CGTTGTCCTCCATGCTCCCGCCGGCGTTGCCGCAAACGCTGCCGTTCCCGTTCCAGCTC---CAAGCATCTGGGCCGCAG
GCGCACGAGGGCGCGCTGCTGCAGCAGCAGCACTCGCCTGCCGCGCGCCTCGCTGCCGTCGAGCAGGCGTCGGCGCCGGC
CGGACAGAACACCGGTGTTCATCGTGGAGGGCTGCCGCCTCTGCCAAGCATCCTATCTCCGGTGCCGGGATCTCTCCCGG
CGATCCCGCCGGGCTTCTTCTCTCCGCCGCCCAGCGGAGCTGGCGGTGGGATCAACCTGTTCGGCGAGCTGATCAGCCCG
GCATTCCATGGCCACGGCGTGTTAACCGGTACTACCACCGCCGGTGCAAGTCCTACACCAATGTCGTTACAGTATTTCCC
CGCTGCAGCTGCGCCGTCGCCGTCGACCCCGTACTATTGGGATCTCTTCAACAACCACCCAAACCACCTATAAATGCATC
TGCAAGACTGCGTGTGGTCAGCTAGCTACACGCGTGGCTACTACTCTATATAGTA------------TATGATCGATTGA
TTTCCATCTCCATGCATGCGTCGCCCGTCTGCAGGGCTGAGAGAATTAGTAGCTTTTTTGGGGGAGAGAAACAGGATTAG
TAGCTATG-TATACATTTGGCATTTGATGAGATGTGATAGGAGCGAAGACATTAAGAGCAAGTTAGATACAGTAGATATA
GATAGCCTAAGTCAGCTGGTACTGCTCATTACCCGCATGCATGCTAGCTGCAAGGAAGCTTCATCCAAGCTAGCAAGCTC
ATGTCTGCT-TGCTACCTTAGTCAGCTGGTATATGTTTGCGCCCCAACTTAATTTGGAGGTGATCCATGATAGAGAATTA
GATAGAGATCATATGGAAGACTCTCAACTGATTTAT--TCATTATTTCTTATACATAATTAAAGACAGACATACATAATG
CTCAGTGCT-GTATGTCTTTCATTTGTAATAGAAATGGGTTTGATTTTCTA----TAATAATCTTCGTGGTTTTCGTAAA
GTAATTACCTCATGTTTACGCGTGCATGTTCAC----GATTGATATATTCGTAGTGCATCTCTAGCTGATCCCCTTATAA
TTTGGTCCCTTACATCTTAACTCGTTATATTTGATCAGCTAAACAATGGTTCTT--------------------------
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>SNPs
------------------------SS--------------------------------S-------S-------------
---------S---------S--------S---------------------------------------------SS-S-S
----------------------S----S----------S----S--------------------S-S-------------
-------------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S-----------------------------
-------------------------S--------S---------------------------------------------
---------------------S----------------------------------------------------------
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SS-----------S---S------S-------------------------------------------------------
---------------------------------------------------------------------S----------
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------------------------S-----------------------------------------------S--S----
----------------------------------------------------------S---------------------
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------------------------------------------------S-------------------------------
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------------------------------------------------------------------------S-------
-S--------------------------S---------------------------------------------------
-----------------------------------------------------S--SS----------------------
---------S-----------------------S------------S----------------S----------------
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--------------------------S-----------------------------------------------------
S------------------------------------------------------S------------------------
----------------------S-----------------------S---------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------S-----------
-----S--------------------------------------------------------------------------
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--S---------------------------------SS-----------------------------------S------
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---------------------------------S----------------S-S--------------------S------
--------------------------------------------------------S-S--S------------------
-----S----------------S---------------------------------------------------------
---S-----------------------------S----------------------------------------------
----S--------S------------S--SSSSSSSSSSSSS--------------------------------------
----------------S-----------S-----------------S---S-S---------------
>forward_26
------GCTCAAGTCAGAATCTGCGC------------------------------------------------------
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>reverse_1943
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----------------------AAGTTACACGCGTGGCTACT--------------------------------------
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