>input_sequence_69466
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----------------------------------------ATGGCGACCGTCGGGTTCGGGCCGTACAGCGTCGCCACAG
CGAGCGAGAAGAACGAGCCGACGAGGCCGCTCGCCTACCCGTCCCCGTCCGTTCACCCGGCGACCGACGAGGACATCGAG
GTCCAGGATGCCGCCGCGACCACCGGCAAGCGCCCGCGCTCCACGCAGTGCTTCTGCGGCCGCCGGTCCGTGCTCTGCTG
CAGCGGCTGCTGCGTGGCCTCCGTGGTCATTGCCGGGATCGTCGCCCTCGTGCTCGCCCTCACCGTGTTCAAGGTCAAGG
ACCCCGTCTTCACCATGAACCGCGTCACCCTGGAGGACGTCGACGGCGACTTCCTCGGCGCGGACGAGCGGCACCCGGTG
TCCGTCAACGCCACCCTCAATGCCGACATATCCATCAAGAACCCGAACGTGGCCTCGTTCAGCTACGACCGGAGCGAGAC
GAACTTCTACTACAAGGGGGAGACGGTCGGCGTGGCGTACGCCCCCGACGGCGAGGTCGGCGCCGACCGGACCGTGCGGA
TGAACGTCACGCTCGACGCGCTCGCCGACCGGATCTCCCCCAACATCAATGTCACCGACCTCATCTTCGGCCAGAGCCAG
GACTACGACCTCACCAGCTACACGGAGATCAGCGGGAGAGTGAGCGTGCTGGGGATCTACAAGAGGGACCTCGACATCAA
GGTGAACTGCTCTATTACCTTGGAGGTCAGCGCCTTTAGCTCAGTGCAGAGTAAAACTACCGACTGCGTTGCAAACGTGA
AGTAA---------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G313300
TCCTCCTCCTCCTCCTTGCGCTGCTCCTCCTTGATGGAGGTTTGCATGGCCACCGCCAACGCAGGCTGGTAGGTAGCCTC
CTCCTCCTTCTCCGGTTTGACCAATGGGGGCGGCGGGGGGTTGTGTGGTGGCACTGGACGCCGCGACAACGTTTCTCTTT
GTGCTCGAGGGCAAACCTGACCTCCCAATCGGGAGAGTCTGGCGTATAGGCAGGAAGCCGGCGCTGCTCCGGCGTCAGGA
GCTCGCGGCGCGCCGTACCTCCTCATCATGAGCCCACTGCGACCACAACACCGCTAGCACGAGAATCCGTTGCAGATCCA
GATGTCAATCGTGCGGCAGGGTGACATCTGGGTACGGCAGCGGCTGCCGGTACTGCTAGTGCCACTGCGCCTGGTGCATC
GGAATGTGTAGTCGCTGCCTCACAGGGCGTCCAGGTACCGCCGCCGGCGGTGGTAGTGGAGGCATGCGGGACGAGCTGGC
GGCGGGGGCGAGCTAGAGGCATGAGGCCGCGGTGGACAAAAAGAAGACGCGTGGCGCGTTCGTTCGTGTCCGCGTCGACG
CAAACTTAAACCTGAAATGTGTCACCGTGGACATCTAGCAAACATGTTTTAAATTTGGGTCGGCACGATTGAGCCGGTGT
TTTTGTACGTTTCGACCCAGCGGGCGGGGAATTGGTTGGTCAAGTTGCTCTAACGGCGTCTTTTTCATCACATCGTAGGT
GGAGTCAACTTGTACCAACGGAAGCCTGCATGCTTCATTTATTAACCGGCAATCCACAAGCCTGCCAAGTCCAGCGGGCG
GGGCGCGTTTGCTCTGTTCCGTCAGTCTCACAGAACGAACAGCAACTACGTACATGCCGCGCCCGGCCCGCCCAACACGA
CTTGTGCAAAATCCACCATAGTATAACAAGACGAGACCACGCCATTTGGCGACGGACCAGACTACCCTCCCATACCTGCT
TGCTCAGGTCTTTGGTCCACAGTTCCATTCCACGTACGCCATGGCGACCGTCGGGTTCGGGCCGTACAGCGTCGCCACAG
CGAGCGAGAAGAACGAGCCGACGAGGCCGCTCGCCTACCCGTCCCCGTCCGTTCACCCGGCGACCGACGAGGACATCGAG
GTCCAGGATGCCGCCGCGACCACCGGCAAGCGCCCGCGCTCCACGCAGTGCTTCTGCGGCCGCCGGTCCGTGCTCTGCTG
CAGCGGCTGCTGCGTGGCCTCCGTGGTCATTGCCGGGATCGTCGCCCTCGTGCTCGCCCTCACCGTGTTCAAGGTCAAGG
ACCCCGTCTTCACCATGAACCGCGTCACCCTGGAGGACGTCGACGGCGACTTCCTCGGCGCGGACGAGCGGCACCCGGTG
TCCGTCAACGCCACCCTCAATGCCGACATATCCATCAAGAACCCGAACGTGGCCTCGTTCAGCTACGACCGGAGCGAGAC
GAACTTCTACTACAAGGGGGAGACGGTCGGCGTGGCGTACGCCCCCGACGGCGAGGTCGGCGCCGACCGGACCGTGCGGA
TGAACGTCACGCTCGACGCGCTCGCCGACCGGATCTCCCCCAACATCAATGTCACCGACCTCATCTTCGGCCAGAGCCAG
GACTACGACCTCACCAGCTACACGGAGATCAGCGGGAGAGTGAGCGTGCTGGGGATCTACAAGAGGGACCTCGACATCAA
GGTGAACTGCTCTATTACCTTGGAGGTCAGCGCCTTTAGCTCAGTGCAGAGTAAAACTACCGACTGCGTTGCAAACGTGA
AGTAACCGATCATTTGCTTATCAGGGTCAGGAAGCCCCTCCTGTTTCTTTTTGTTCTCTATATATCCTCCATTTCTTTCT
CT----ACTGTTTTGAGATGGATCCTCCTTTTCTTTGACCCATGTATCGTTATGTAATTATTACTCCTTCCATACGAAAA
TACTTGTC---------------ATCAGGGTGTTCCACTTTATAAAAGGATAGAAATCAGTTGCTTAGGCCAGTTATTGT
CCACTTGACAGAACAAGAGCAAACCTACAAATTCGATTTCTAGACAGACTGGTAGGTTAACAACCTTGTTTTTTGTAGTC
CTTTTGCTGACGAATGCTCTTTCTAGTATTTTCTCGCTTCATCTCCGTCATCTCTCACGAACAGTAACCTTTTTTGATCG
TGACACTC-GATCACTAAAATTTACAAAAAGCATTAAGCATGCTGCATCGAGGTACTGTACAAAGATGAGATAAGTCACC
ACTGAAAAGGAAAGAGATAAACCATGCGGAAGGCATGGTGAGCA---ATTTCAAGACTCAAAAAAATGTGACAAGATTTC
AA-TAAAACATGGAGAGTTGTTAGATGTTGGGATTTATGATGTGTTTGGTTAGGGGGTATATTCACTCGTGATCCTTCAC
ACCTTGGCGTGCCAGATGAGTCCCCTCATACTCGCAGGGAATGCCACCTTTGAGTAAAAGGGGTTTCCCCTTATTTCTAT
TAATAGAAACCATTAGGCTGGTCATAGTGAGGAGTAACTTAAACTAGTAATATGCATATGTTATTAGTCTATATATTACT
ACCTTCATAGTGGGTAGTAATATATATGAATGGTAACATGCAAGTCTTCATTAATTGAGATATAGACTCATTTTGCCTCA
GGGTGCGTTATGTTACAGTAACATATTATGTTACCACAAACATCTCTTTCCTCATTAACTCCATGCCACATAAACAATTA
TTTCTTGGGATGTGTTATGTTACTACCTAAGTTATTCCCACTATGGCTAGCCTTAGGAGTTCATTACAC
>chr3A_702
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-------------------------------------------------------------TTTTCATCACGTCGTTGGT
GGAGTCAACTTGTACCAACGGAAGCCTGCATGCTTCATTTATTAACCGGCAATCCACAAGCCTGCCAAGTCCACCGGGCG
GGGCGCGTTTGCTCTGTTCCGTCAGTCTCACAGAACGAACAGCAAC-ACGTACATGCCGCGCCCGGCCCGCCCAACACGA
CTTGTGCAAAATCCACCGTAGTATAACAAGACGAGACCACGCCATCTGGCGACGGACCAGACGACCCTCCCATACCTGCT
TGCTCGGGTCTTTGGTCCACAGTTCCATTCCACGTACGCCATGGCGACCGTCGGGTTCGGGCCGTACAGCGTCGCCACAG
CGGGCGAGAAGAATGAGCCGACGAGGCCGCTCGCCTGCCCGTCCCCGTCCGTCCACCCGGCGACCGATGTGGACATCGAG
GTCCAGCATGCCGCCGCGACCACCGCCAAGCGCCCGCGCTCCACGGGGTGCCTCCGCGGCCGCCGGTCCGTGCTCTGCTG
CGGCGGCTGCTGCATGGCCTCCGTGGTCATCGCCGGGATCGTCGCCCTCGTGCTCGCCCTCACCGTGTTCAAGGTCAAGG
ACCCCGTCTTCACCATGAACCGCGTCACCCTGGAGGACGTCGACGGCGACTTCCTCGGCGCGGACGAGCGGCACCCGGTG
TCCGTCAACGCCACGCTCAACGCCGACATCTCCATCAAGAACCCGAACGTGGCCTCGTTTAGCTACGACCGGAGCGAGAC
GAACTTCTACTACAAGGGGGAGACGGTCGGCGTGGCGTACGCCCCCGACGGCGAGGTCGGCGCCGACCGGACCGTGCGGA
TGAACGTCACGCTCGACGCGCTCGCCGACCGGATCTCCCCCAACGTCAACGTCACCGACCTCATCTTCGGCCAGAGCCAG
GACTACGACCTCACCAGCTACACGGAGATCAGCGGGAGAGTGAGCGTGCTGGGGATCTACAAGAGGGACCTCGACATCAA
GGTGAACTGCTCCATTACCTTGGAGGTCAGCGCCTTTAGCTCAGTGCGGAGTAAAACTACGGACTGCGTTGCAAACGTGA
AGTAACCGATCAT-TGCTTATCAGGGGCAGGACGCCCCTTCTGTTTCTTTTTGTTCTCTATATATCCTCCCTTTCTTTTT
CTTCACACTGTTTTGAGATGGATCCTCCTTTTCTTGGACCTATGTATCGTTATGTAATTATTATTATTATTAGTTACCTT
TTAGGGGATTTTCATATAATTATATCAGGGTGTTCCACTTCATGAAAGGATAGAAATCAGTTGCTTAGGCCAGTTATTGT
TCACTTGACAGAACAAGAGCAAAGCTACAAAATCGATTTCTAGACAGACTGGTAGGTTAACAACCTTG-TTTTTGTAGTC
CTTTTGCTGACGCATGCTCTTTCTAGTATTTTCTCGCTTCATCTGCGCCATCTCTCATGAACAGTAACCTTTTTTTATCG
TGACTCTCGGATCACAAGAATTTACAAAAAGCATTGAGGTCGCGT-ATCGAGGTAGTGTTGAAAGATTAGATAAGTCACG
GCTAAAA---AAAGAGATAAACCATGCGGAAGGCATGGTGATGTACTATTTCAAGACTCAAACAAATGTGACAAGATTTC
AAATAAAACATGGGGAGTTGTTAGACGTTGGGTTTTGTGATGTGTTTGATTAG---------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S----S---
-------------------------------------------------------------------------S------
----------------------------------------------S---------------------------------
-----------------S---------------------------S----------------S-----------------
-----S--------------------------------------------------------------------------
--S----------S----------------------S---------------S--------------S-S----------
------S------------------S-------------------SS----S--S-------------------------
-S-----------S----------------S-------------------------------------------------
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--------------S-----S--------S-----------------------------S--------------------
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--------------------------------------------S----S------------------------------
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------------S----------------------------------S------------S-------------------
-------------S------------S-----S------S------------------------------S-------S-
-----------------------------------S----S----------------------S-SS-SSS-SSSSSSSS
-SSSS-SS--------------------------------S--S------------------------------------
S----------------------S-------S------------------------------------S-----------
------------S-------------------------------S--S---------S-----------------S----
----S----------S-S-----------------S--SSS--SSS---------S---SS------S-----------S
S--S---SSS-------------------------------SSS------------------S-----------------
-------------S-----------S------S---S-----------S----SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_535
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-----------------------------------ACAAAAAGAAGACGCGTGGC-------------------------
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>reverse_2390
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---------------------------------------------------------------------TGATCCTTCAC
ACCTTGGCG-----------------------------------------------------------------------
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