>input_sequence_69440
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------------------------------------------ATGTCCACTGATGGTATGTACAAATATCTCTTCCAAGT
ATATGACGAAGGGATTTGATA--GGCAGATAAAAAAATGGAGTCTAATGATGGATCATCTGATTCATCAAGTGAAACAAT
CAATGAAATAGAAAATCATCCAAAATGTCGCTATATGACACCAAATGAGATTGTTTGGCGCTTTCCAGAGAGAATGAAGA
TTGATTCAGTGTCTAGGTTCCCC---------GTCATAAAGAAAAGCTTCTCAGTTGACAATGCACAAGTGTTACCTTCT
ACAAAGGTTGGCTAATTTCTTTTCATTCAAAGAGTATGTT---CTTCCTAATTTTAACC--ATATTACCTACTACATACA
AAGTACTAACTTGAAACATGAAATACTTCCAGCCATCTCCATGCAAAGAAATGATGACCCATCCATCTTCAAAGAATATC
GAGAGGTTTGCCATCAATCACAAAAAAGCATTTACATTCTCTATCTAAACATCGCCGACCCAACAATT-TTATTTTCGCA
GTGCGATGACCCTTACACCAGAGGATGCAA--------ACAATACTACACCTCCCTCTTGCCAACCCGCAACTAATGTCA
TTGAGAAACAAAAAAATGGGTAATAGTTTTAAAACTCTCCGCA----TAAATCGACCGGTTCAGATTCAACATGAAATTC
AAATGACGTTTTTTTTTTCATAGGTACTCTTTGGCTAAGATGAGCATTGAACTTTCAGAAGATGAAACCACCAACACAGA
GATTATTGGGCAATCGGGACATGCGAGGGAAAAATGA-------------------------------------------
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---------
>chr1A_1_TraesCS1A01G257100
ATCTGCTTTCATTTAAGGCAATTTTGTACGCATGCTTTGCAAAGATGGATAGCGCTGAAAATTCTTATACAAATCATGGT
ATCCGGTCAGTCCCACGCGGTCGTGGGCGCCCCCATCGTCAGTCACAATTAGAGACACCTTACATGCTTATGGTTGCTGA
AATATTTTTGTATGTGTTAAGCCAGTAATTTATTTTGCATTGTTTACCTCTGTTTTTAAGGTTCACGAAGCTACTGACCC
TGAAAGAGTGGTGATGCGAGTGAGATTCTGAGAGGTAACTTTTGTTCTCTCAAACACATTCCATGTTAGAAAGATATTAA
TTGTCTTAGACGACCTAGACTACATGAAACACATTCTATGTTAGAAAGACATCAATGGTCCACCTTCTTTCTATCGGAAA
AACAGGAAGGTCTCAATTTTCTTATTGGTTGGACCATTGTATTTAGTTATATTGTTATATA-TGGTCTCAATTATATTTG
TAAGCAATGTACCATATATCAG-TTTTTCATTTAGTAAAGAAGTGATCTTATCTACCCGCAAAAAAAAGAGATCCTATCT
TTATGAATTTCTCAGATTGCTCTCATATCAAAAGGAGCTCGACGTTATGCTTCACAGATCTCTTCCTGCTCGGACTGGAT
TCATTGCTTCATAGGTATCTTGCAGCTTGCATTGGTATGAACACACTCACTGCTGAATTTAATTAGTTACACTTGATGAG
CATATGCACCTTCTATTTATTTCAGTGCATATTACATAGTAAAATACCATATAAATTTCTTCCTCTTGATTATTCCATTC
TATTTATTTGTTCAAACATATTGGCTATGATCTACTTCAAGGCATCCTGGTAGGCATTTAGTCTCACGTAGTAATGAGCA
CCCTCGCCGTCAATCACAACATGTTGTCACACCCTTGAAATAGAGGCCAGTTAGGATAATACAAAAGTATTACCCTAAAG
ATTTCTATGAGCAAGCCACTATTAGAGAATGTGTTCCTCACAATGTCCACTGATGGTATGTACAAATATCTCTTCCAAGT
ATATGACGAAGGGATTTGATA--GGCAGATAAAAAAATGGAGTCTAATGATGGATCATCTGATTCATCAAGTGAAACAAT
CAATGAAATAGAAAATCATCCAAAATGTCGCTATATGACACCAAATGAGATTGTTTGGCGCTTTCCAGAGAGAATGAAGA
TTGATTCAGTGTCTAGGTTCCCC---------GTCATAAAGAAAAGCTTCTCAGTTGACAATGCACAAGTGTTACCTTCT
ACAAAGGTTGGCTAATTTCTTTTCATTCAAAGAGTATGTT---CTTCCTAATTTTAACC--ATATTACCTACTACATACA
AAGTACTAACTTGAAACATGAAATACTTCCAGCCATCTCCATGCAAAGAAATGATGACCCATCCATCTTCAAAGAATATC
GAGAGGTTTGCCATCAATCACAAAAAAGCATTTACATTCTCTATCTAAACATCGCCGACCCAACAATT-TTATTTTCGCA
GTGCGATGACCCTTACACCAGAGGATGCAA--------ACAATACTACACCTCCCTCTTGCCAACCCGCAACTAATGTCA
TTGAGAAACAAAAAAATGGGTAATAGTTTTAAAACTCTCCGCA----TAAATCGACCGGTTCAGATTCAACATGAAATTC
AAATGACGTTTTTTTTTTCATAGGTACTCTTTGGCTAAGATGAGCATTGAACTTTCAGAAGATGAAACCACCAACACAGA
GATTATTGGGCAATCGGGACATGCGAGGGAAAAATGACATCGTCAAGGTGCATGCAATCACAAGAATAATGCTGCACAAG
AATACTATTGTTTTTAGCAACATGAACGACATAGAAGAGATG--------CACCTACGAGCTACACTACTACCTTTCTAC
ATAAAATT-AGTTACATCCTTGCTTGAATTGTAATCCTGACAAACTCACGTTATTACTATTTCCAAATGACCCTATGCAT
ATTACCTATGCAATTATTAAGTCTGAATTGTGAAGTCTATGGGTGATATGTACTTTACAGAGCCGATTATCTGTATTTTA
CTTCACTAGTTCTCAAATCTATTAACCTTGATGGTTCAATAAATATACAAATATATACTTCCTTTCATGATTTGAATTAT
TTATCAGCACATCAATTATCCTC--TACAAAATCCCGCAGCAACGCACGGGGTATCAACTAGTTCCATAAGTTTCAAGCA
ATGTACGCGGAGGGGGTGCAAATCTGCACGGTATCATCCTTCTGAAGGTGAGTGAAAACTTTTTTCCACCATCCCACAAT
GGAGCTTGTGTCGAGGGCATGTCGAGCAGCAAATTGGTTGGTGGAGCTGAAGTAGTGCCAGACCTCCTTGTCATAGGGCA
CAAGAGGATGAGGTGAGCGGCAGTCTCAAGGACTTGATTACAGTTGCAGCAGCGATCATGATGATCCCAGTTCCGATGTT
GTAGTCTGTCGGCAGTCCATAATCTATTTTGCAACAACGTCCACATGAAGAATTTCACTTTAGCTTCCGCCTTA-ATCTT
CCAAACACTATCCAACACCAATATAGGGATCCTTGTCTTGAACTGAATATCATAGGCCGATTTGGCTGAGTAGTTGTTGT
TTGAAGTAAGAGTCCAAACTAGAGAATTATCCTCCATGCTAGGAAGGATACCAGATTGTACCGACTCCACTTTCGTCCAT
AAACATAGGAAATCCTCGAGTGTAGCAACATCATCCATCGTATTTAAACCTCTCATCCATCTGCCGTCAGTGAGTGCATG
ATAGATTGT
>chr6B_1
ATCTGCTTCCAT---AGGCAATTTTGTACGCATGCTTTGCAAAGATGGATAGCGCCGAAAATTCTTATACAAATCATGGT
ATCCGTTCAGTCCCACGTGGTCGTGGGCGCCCCCATCGTCAGTCACAATTAGAAACACCTTACATGCTTATGGTTGCAGA
AATATTTTTGTATGTGTTAAGCCAGTAATTTGTTTTGCATTGTTTACCTCTGTTTTTAAGGTTCACGAAGCTACTGACCC
TGAAAGAGTGGTGATGCGAGTGAGATTCTGAGAGGTAATTTTTGTTCTTTCAAACACATTCCATGTTAGAAAGATATTAA
TTGTCTTAGACGACCTAGACTACATGAAACACATTCTATGTTAAAAAGACATCAATGGTCCACGTTCTTTCTATTGGAAA
AACAGGAAGGTCTCAATTTTCTTATGGGTTGGACCATTGTATTTAGTTATATTGTTATATAATGGTCTCAATTATATTTG
TAAGCAATGTACCACATATCAGTTTTTTCATTTAGTAAAGAAGTGATCTTATCT--------------------------
TTATGAATTTCTCAGATTTCTCTCGGATCAAAAGGAGCTCGACGTTATGCTTCACAGATCTCTTCCTGCTCGGACTGGAT
TCATTGCTTCATAGGTATCTTGCAGCTCGCATTGGTACGAACACACTCACTGCTGAATTTAGTTAGTTACACTTGATGAG
CATATGCACCTTCTATTTATTTCAGTGCATATTACATAGTAAAATACCATATAAATTTCTTCCTCTTGATTATTCTATTC
TATTTATTTGTTCAAACATATTGGCTGCAATCTACTTCAAGGCATCCTGGTAGGCATTTAGTCTTACGTAGTAATGAGCA
CCCTCGCCGTCAATCACAACATGTTGTCACGCCCTT-AAATTGAGGTCAGTTAGGATAATACAAAAGTATTACCCTAAAG
ATTTCTATGAGTAAGCCACTATTAGAGAATGTGTTCCTCACAATCTCCACTGATGGTACGTACAAATATCTCTTCCAAGT
ATATGACAAAGGGATTTGATA--GGCAGAT-AAAAAATGGAGTCTAATGATGGATCATCCGGTTCATCAAGTGAAACAGT
CAATGAAATAGAAAATCATCCAGAATGTCGCTATATGACACCAAATGAGATTGTTTGGCGCTTGCCAGAGAGAATGAAGA
TTGATTCAGTATCCAGGTTCCCCGTAAGTTATGTCATAAAGAAAAGCTTCTCGGTTGACAATGCACAAGTGTTACCTTCT
ACAAAGGTTGGCTAATTTCTTTTCATTCAAAAAGTATGTT---CTTCCTAATTTTAACC--ATATTACCTACTACATACA
AAGTACTAACTTGAAACATGAAATACTTCCAGCCATATCCATGCAAAGAAATGATGACCCATCCATCTTCGAAGAATATC
GAGAGGTTTGGCATCAATCCCAAAATAGCATTTACATTCTCTATCTAAACATCGCCGACCCAACAATT-TC-TATTCGCA
GTGCGATGACCCATACACCAGAGGATGCAA--------ACAATACTACACCTCCCTCTTGCCAACCCGCAACTAATGTCA
TTGAG---AAAAAAAATAGGTAATAGTTTTAAAACTCTCCGCA----TAAATCGGTTGGTTCAGATTCAACATGAAATTC
AAATGATGA-TTTTTTTTCACAGGTACTCTTTGGCTAAAATGAGCATTGAACTTTCAGAAGATGAAACCACCAAAAAAGA
GATTATTGTGCATTTAGGACATGCGAGGGAAAAATGACATTGTCAAGGTGCATGCAATCACAAGAATAATGCTGCACAAG
-------------TTAGCAACATGAACGACATAGAAGAG------------ACCTACGAGCTACACTACTACCTTTCTAC
ATAAAATTTAGTTACATCCTTGCTTCAATTGTAATCCCGACAAACTCATGTTATTACTATTTCCTAATGACCCTATGCAT
ATTACCTATGCAATTATTAAGTCTGAATTGTGAAGTCCATGGGTGATATGCACTTTACAGAGCTGATTATTTGTATTTTA
ATTCAATTGTTCTCAAATCTATTAACCTTGATGGTTCAATAAATATACAAATATATACTTCCTTTCATGATTTGAATTAT
TTATCGGCGCATCAATTATCATC--TACAAAATCCCGCAGCAACGCGCGGGGTATCAACTAGT-----------------
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>chr5B_1
ATCTGCTTCCAT---AGGCAATTTTGTACGCATGCTTTGCAAAGATGGATAGCGCCGAAAATTCTTATACAAATCATGGT
ATCCAGTCAGTCCCACGTGGTCGTGGGCGCCCCCATCGTCAGTCACAATTAGAAACACCTTACATGCTTATGGTTGCAGA
AATATTTTTGTATGTGTTAAGCCAGTAATTTGTTTTGCATTGTTTACCTCTGTTTTTAAGGTTCACGAAGCTACTGACCC
TGAAAGAGTGGTGATGCGAGTGAGATTCTGAGAGGTAATTTTTGTTCTTTCAAACACATTCCATGTTAGAAAGATATTAA
TTGTCTTAGACGACCTAGACTACATGAAACACATTCTATGTTAAAAAGACATCAATGGTCCACGTTCTTTCTATTGGAAA
AACAGGAAGGTCTCAATTTTCTTATGGGTTGGACCATTGTATTTAGTTATATTGTTATATAATGGTCTCAATTATATTTG
TAAGCAATGTACCACATATCAGTTTTTTCATTTAGTAAAGAAGTGATCTTATCT--------------------------
TTATGAATTTCTCAGATTTCTCTCGGATCAAAAGGAGCTCGACGTTATGCTTCACAGATCTCTTCCTGCTCGGACTGGAT
TCATTGCTTCATAGGTATCTTGCAGCTCGCATTGGTACGAACACACTCACTGCTGAATTTAGTTAGTTACACTTGATGAG
CATATGCACCTTCTATTTATTTCAGTGCATATTACATAGTAAAATACCATATAAATTTCTTCCTCTTGATTATTCTATTC
TATTTATTTGTTCAAACATATTGGCTGCAATCTACTTCAAGGCATCCTGGTAGGCATTTAGTCTTACGTAGTAATGAGCA
CCCTTGCCGTCAATCACAACATGTTGTCACACCCTT-AAATTGAGGTCAGTTAGGATAATACAAAA-----------AAG
ATTTCTATGAGTAAGCCACTATTAGAGAATGTGTTCCTCACAATCTCCACTGATGGTACGTACAAATATCTCTTCCAAGT
ATATGACAAAGGGATTTGATA--GGCAGAT-AAAAAATGGAGTCTAATGATGGATCATCCGGTTCATCAAGTGAAACAAT
CAATGAAATAGAAAATCATCCAGAATGTCGCTATATGACACCAAATGAGATTGTTTGGCGCTTGCCAGAGAGAATGAAGA
TTGATTCAGTATCCAGGTTCCCCGTAAGTTATGTCATAAAGAAAAGCTTCTCGGTTGACAATGCACAAGTGTTACCTTCT
ACAAAGGTTGGCTAATTTCTTTTCATTCAAAAAGTATGTT---CTTCCTAATTTTAACC--ATATTACCTACTACATACA
AAGTACTAACTTGAAACATGAAATACTTCCAGCCATATCCATGCAAAGAAATGATGACCCATCCATCTTCGAAGAATATC
GAGAGGTTTGCCATCAATCCCAAAATAGCATTTACATTCTCTATCTAAACATCGCCGACCCAACAATT-TC-TATTCGCA
GTGCGATGACCCATACACCAGAGGATGCAA--------ACAATACTACACCTCCCTCTTGCCAACCCGCAACTAATGTCA
TTGAG---AAAAAAA-TAGGTAATAGTTTTAAAACTCTCCGCA----TAAATCGGTCGGTTCAGATTCAACATGAAATTC
AAATGATGA-TTTTTTTTCACAGGTACTCTTTGGCTAAAATGAGCATTGAACTTTCAGAAGATGAAACCACCAAAAAAGA
GATTATTGTGCATTTAGGACATGCGAGGGAAAAATGGCATTGTCAAGGTGCATGCAATCACAAGAATAATGCTGCACAAG
-------------TTAGCAACATGAACGACATAGAAGAGATG--------CACCTACGAGCTACACTACTACCTTTCTAC
ATAAAATTTAGTTACATCCTTGCTTCAATTGTAATCGCGACAAACTCATGTTATTACTATTTCCTAATGACCCTATGCAT
ATTACCTATGCAATTATTAAGTCTGAATTGTGAAGTCCATGGGTGATATGCACTTTACAGAGCTGATTATTTGTATTTTA
ATTCAATTGTTCTCAAATCTATTAACCTTGATGGTTCAATAAATATACAAATATATACTTCCTTTCATGATTTGAATTAT
TTATCGGCGCATCAATTATCATC--TACAAAATCCCGCAGCAACGCGCGGGGTATCAACTAGTT----------------
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>chr7B_990
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-------------------------------TGTTCCTCACAATGTCCACTGATGGTATGTATAAATACATTTT-CAAGT
ATGTGAAGAAATGTTTTTATTTTGCCAGAT-AAAAAATGGAGTGTAATGTTGGATCATCGGATTCATTAAGTGAACCAGT
CAATGAAATAGGTAATCATCTAGAATGTTGCTATATTTCACCAATTGAGGTTGTTTGGCGCTTGCCGAAGAGAATGGAGA
TTCATTCAGTATCTAGGTTCTCCAAGTGTTATGTCACGAAGAAAAGCATCTCAGTTCACAATGCGCCAATGTTGCCATCT
GCAAAGGTTAGACAGTTTCTATTAATGCAAAGAGTATCTTCTTTTTCCTAATTTCAACAATATATTACCTAT-------A
AAATATGAACCTTAACCATGAAGTACTTCCAGCCATCTCCAAGCAAAGAAAAGATGATTCATCCATCTACAAAAAGTATC
AAGAGGTTTGCCATCAATCACAAATTAGGAGTTACAAGCTCTATCTAAACATTGATGACCCAACT-TTTGC-TATTTTCA
GTGCGATCATCAACGGACCAAAGGACT--------CAAACAACATTACACCACCCTCTTGCCAACCTGCGGCTATTGTCA
TCGAGAAAAAACAAAATATGTAATAGTTTTGAAATTCTCAATATAACTAACTCAATCAGTTCAGATTGAACATGAAATTT
AAATGACCA----TTTTTCGCAGGTACTCTTTAGATAAAAGGAGCATTCAACTTACAGAAGGCGAAACCACCAACAAAGA
TATCATTGTGCAATCAGGCCAAGCAAGGGAAACATAACATCATTAAGATGCATGCAAGCATCAGAATAAAGTTGCAAAAA
TAAAGT----TGTTTTTCAACATGCAGGACATCGTCAAAGATGCA-----------------------------------
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>chr6B_998
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---------------------------------------ACAATGTCCACTAATGGCATGTACAAATATAACTT-CAAGT
ATGTGACGAAAGGATTTGATT--GCCAGATCCAAAGATGGACTCTAATACTGGATCATTTGACTCATCAAGTGAAACAGT
CAATGAAATAGAAAATCATCCAAAATGTCGCTATATGACACCAAATGAGGTTGTTTGGCGCTTGCCAAAGAGAATGAAGA
TTGATTTAGTATCGAGCTCCACCATAAGTTATGTCATAAATTAAAGCTTCTCAAATGATAGTGCACAAATGTTACCCTCT
ACAAAGGTTAGAC---TTCTGTTCATTCAAAAAGTATGTTATTCTTCCTAACTAAAACC--ATATTACCTAC-------A
AAAAACTAACTTGAATCATGAAATACTCCCAGCCATCCCCAAGCAAAGAAATGATGACCCATCCATCTTCAAAAAGTATA
CAGAGGTTTGCCATCAGTCACAACGTAGAATTTACAAGCTCTATTGAAACATCGCTGACCCAAT-ATTTGT-TATTCACA
GTGCGATGATCCATACACCAGAGGGCTTC--------AACAATACTGGACCTTCCTCATGCGAACGCACAACTATTTTCA
TTGAGAAAAAAAGT-ATAGGTAATACTTTTAAAACTCTATATA----TAAATTGATGGGTTCAGATTCAACATGAAACCA
AAATG-----TTTTTTTTCACATGTACTCTTTAGCTGAAAGGAGCATTG----TGCAGAAGATAAAACCATCA-------
GATTGTTGTGCAATCAGGATAGGCGATGGAAACATAACATTTTCAAGATGCATGCAATCACAAGAATGATGTTGCACAAG
AATAATGTTGA-TTTAACAACATGAAGTACATTGACGAGATGCATGCAAGCACCTACGAGCTGCACTGTCTTC---ATAC
CAAAAATG-AGTTACATCGCCGCTTAAATTGTAATCGTGACAAACTTGCTTTATTACCATTTCATGATTACCCTAT----
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>chr4A_1349
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------TAACTTGAAACATGAAATACTTCCAGCCATCTCCATGCAAAGAGATGATGACCCATCCATCTTCAAAGAATATC
AAGAGGTCTGCCATTAAGCACAAAATAGCATTTACATTCTCTATCTAAACATGGCCGACCCAATAATTTTC-TATTCGCA
GTGCAATGACCCATACACCAGAGGATGCAATCATGCAAACAATACTACACCTCCCCCTTGCTAACCCACAACTAATGTGG
TTGAGAAACAAGAAAATAGGTAATAATTTTAAAACTATCCGCA----TAAATCGATCGGTTCAGATTCAATATGAAATTC
AAATGATGA-TTTTTTTTCACAGGTA-TCTTTGGCTAAAATGAGCATTGAACTTTCAGAAGATGAAACCACCAATAAAGA
AATTATTGTGCAATCAGGACATGCGAGGGAAAAATGACATCGTCAAGGTGCATGCTATCACAAGAATAATGCTGCACAAG
AATACTGTTGTTTTTAGCAACATGAACGACATAGAAGAGATG--------CACCTACTAGCTACACTACTACCTTTATAC
ATAAAATT-AGTTACATTCTCGCTTAAATTGTAATCCCAACAAACTCACGTTATTACTATTTCCTAATGACCCTATGCAT
GTTATATATGCAATTATTAAGTCTGAATTGTGAAGTCTATGGGTGATATGCACTTTACTGAGCTGATTATTTGTATTTTA
CTTCAATTGTTCTCAAATCTACTAACCTTGACGGTTCAATAAATATACAAATATATATTTCCTTTCATGATTTGAAATAT
TTATCAGTGCATCAATTATTCTTTATAAAAAATTCCGCAGCAACGCTTGGGGTATCAACTAGT-----------------
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>chr1D_2181
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--------------------------------------------------------------TTCCATAAGTTCCAAGCA
ATGTACGCGGAGGGGATGCAAATTTGCACGGTGTCATCCTTCCGATGGTGAGTGAAAACTTTCTCCCACCAT-CCACAAC
TGAGCTTGCGTCGAGGGCATGTCGAGCAACAAATTAGTTGGTGGAGCTGAAGTAGTGCCAGACCTCCTTGGTATAGGGCA
CAAGAGGATGAGGTGAGCGGCAGTCTCAAGGACTTGATCACAGTTGCAGCAGCGATCGTGATGATCCTAGTTTCGATGTT
GTAGTCTGTCGGCAGTCCATAATCTATTTTGCAGCAACGTCCACAGGAAGAATTTCACTTTAGCTTTCGTCCGTGATCTT
CCAAACACTATCCAACACCGGTATAGGGATCCTTGTCTTGAACTGAATGTCATAGGCCGATTTGGCTGAGTAGTTGTTGT
TTGAAG----AGTCCAAACCAGAGAATCATCCTCCGTGCTAGGAAGGATAACAGATTGTACCGACTGCACTTTTGTCCAT
AAACATAGGAAATCCTCAACTGTAGCAACATCATCCATCCTATTTAAACCTCTCATCCATCTGTTGTCAGTGATTGCATG
ATAGATTGT
>SNPs
--------S---SSS----------------------------------------S------------------------
-----------------S-----------------------------------S-----------------------S--
-------------------------------S------------------------------------------------
--------------------------------------S---------S-------------------------------
-------------------------------------------S-------------------S----------S-----
-------------------------S------------------------------------------------------
--------------S---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
------------------S-----SS------------------------------------------------------
---------------------------S---------S-----------------------S------------------
---------------------------------------------------------------------------S----
--------------------------SSS-----------------------------------S---------------
------------------------------------S----S----S---------------------------------
-----------S--------------------------------------------------------------------
------------------------------S-------------------------------------------------
---------------------------------------------------------------S----------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------------------------------------------S-S------
------------S-------------------------------------------------------------------
-----------------S-------------------------------------S------------------------
--------SS----------S-----------------S-------------------------------------S---
--------S------S----------------------------------------------------------------
------S-------------------------------------------------------------------------
-------------------------S--------------------------------------S---------------
--------------------------------------------------S------------S------S---------
-----S-S------------------------------------------------------------------------
--------S-------------------------------------S--------------------------S------
---------------S-------S--------S---------S--S----------------S-S-------S------S
S-------S-------------------S------S----------------------------------SS--------
--------------------------------------S------------------S---------S----S-------
---------------------------------S-----------S--------------------S--S-SSS------
-------------------SS---------------------------S-------------------------------
------SSSS---------S-------S-------S--------------S---------------S------S------
-----------------S-S-------------------S-----------------------SS--------S------
---------
>forward_56
------------------------------------TTGCAAAGATGGATAGCGCT------------------------
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>reverse_1776
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---------------GGGACATGCGAGGGAAAAATG--------------------------------------------
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>forward_1512
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----------------------------------------------------TCGCCGACCCAACAATTTTA--------
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>reverse_2439
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--------------------------------------TACAGTTGCAGCAGCGATCA----------------------
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---------
