>input_sequence_69377
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------------------------------------------------------------------------------AT
GGCGACCATGGCCGGGCGCTACTGCTGCAGCTAC---AGCTCGCCCTCTGCCTCTGCGCCGCCGCCCCATCGGCAGCGCG
GGCCTCCGCTGCAGCCGCGACCCACGGGAGGACGGGGAAGGGGACTCCGGCGGCCGAGCCTACGGGCGGTCGCGTCGGCG
GCGGCGGAGCCCGTGAAGGCTGCCACCGACGCCGAGTTCTTCCAGCCCGCCGACTCGAGGCCCATCATGCTCTTCGACGG
CGTGTGCAACCTCTGCAACGGCGGCGTCCGGTTCGTGCGGGAGCACGACCCCGGCCGGAGCATCAGGTACATCCCCCTCC
AGAGCGACTCCGGGAGGAAGCTCCTGCGCAGGTCCGGCAGAAGCCCCGACGACATCTCCAGCGTCGTCCTCGTCGAGAAG
GACAGGTAACCAAACCGAGTCTGGTCGAGCTGCTCTGCCTTTGTCCATCGACATCAGCCATGGCCAAGTGTGGTGAGAAA
TGTTCTTTGCCCCT-CAGGTCATACATCAAGTCTGACGCCGTGCTGAGGATAATGGAGTACCTGAACCTGCCGTTCCCGC
AGCTCGCCGCGTTCCTCAAAATTGCCCCTTTGTAAGCTCAATTCACACACACACACTGCATGCTTTCAATTGAACCACTG
CAATTGCA-----AACTACTAATTCGTGGCGATGCCATGGCTAGGTTTGTGAGGGACTTCGCCTACGACAACGTCGCGAA
CAACCGGTATGTGGTTTTCGGCCGGTCAGAGA------------------------------------------------
--------------------------------------------------------------------------CAGAAT
CATGCGAGATACTCTGA---------------------------------------------------------------
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------------------------------------------------------------------
>chr3B_1_TraesCS3B01G148400
GATCATATATCTTGGCCAGCAATGCTGCCATGAACCTTCTCCACATTTATCATCATGTACTCTCAACTTTCCTCTTTTAA
CCTTGGTGTGTGTAGAGATTAGGACATCCACGGTGGAAATAAACGACGAATCGAGAGGCCGCCCATTCCAAAAGGCTAAG
GTAAGAGAG-----------------TAACAACAGTTTGGCTTA-CTCTTTGTCTGTCAATG--TGCTAATTCTCTTATG
TATGAAGTTCCACTTCTCGACAAGTAAAACTGACTCGGCGACTGATTCATGCAGATTGAGATAGAGTTGGGAAAGAGCGA
GAAATTCGACGAGTTGATGGCCTCTGCTGCGGCAGATGCCGAAGAAGGCGAGGAGGAGGCCTGAAGAACCAAACAAAGCC
GTAGCGACCACATCCTGTTGCTCTACTTTGTTATCGCTGTTGTTTAAAAC-TTCAAAACCAATGCACCAGACATGGCGTG
TGTTCTTGTTTAACTTGTATTTTCGTAGTGTCAGTGTTTGTGAACTCTTTGGCAGATGAT-AATCAGTTTCGTGTGCATT
TCTT-TCTCCGAACTGCTG-------------GCTGGAAGTAATCTTTTTCGCGTGTGCTCCGTTTGGTCCT--AATCCG
GAGAGGCTCTACGTTTGTAATTTTGTTGATTGATACCACTATGGTGCGAATGCAGGCGCTGTGTTTCTCATGTAATTTTC
TTTTTGAGCATCATAAACTTTATTCATCAAATGATAGCTAAATCGTTTACATAATGATGAAGAATAAAGTCAGGGATGAC
AGTTTCCCATGCTTCAGACTTGCCAGAACTAATACAACGTTTCTCATGTAATTTTAGTTTGGAATGTGAAATTCTGGAAG
CAAATCCGCTCGGCTGCAAGCCCGTTTTACCCCGGCCAAAATTACCCGTTGCTGGACGTGCCACGTAGCCTCAGGCGCAC
CGTGCCTTCGGCTCTGAAGAGAAATGAAGCTTGGACAAGCCACTGCACAGCAGATACACGAGAGAAGGGAAGGAGGCGAT
GGCGACCATGGCCGGGCGCTACTGCTGCAGCTAC---AGCTCGCCCTCTGCCTCTGCGCCGCCGCCCCATCGGCAGCGCG
GGCCTCCGCTGCAGCCGCGACCCACGGGAGGACGGGGAAGGGGACTCCGGCGGCCGAGCCTACGGGCGGTCGCGTCGGCG
GCGGCGGAGCCCGTGAAGGCTGCCACCGACGCCGAGTTCTTCCAGCCCGCCGACTCGAGGCCCATCATGCTCTTCGACGG
CGTGTGCAACCTCTGCAACGGCGGCGTCCGGTTCGTGCGGGAGCACGACCCCGGCCGGAGCATCAGGTACATCCCCCTCC
AGAGCGACTCCGGGAGGAAGCTCCTGCGCAGGTCCGGCAGAAGCCCCGACGACATCTCCAGCGTCGTCCTCGTCGAGAAG
GACAGGTAACCAAACCGAGTCTGGTCGAGCTGCTCTGCCTTTGTCCATCGACATCAGCCATGGCCAAGTGTGGTGAGAAA
TGTTCTTTGCCCCT-CAGGTCATACATCAAGTCTGACGCCGTGCTGAGGATAATGGAGTACCTGAACCTGCCGTTCCCGC
AGCTCGCCGCGTTCCTCAAAATTGCCCCTTTGTAAGCTCAATTCACACACACACACTGCATGCTTTCAATTGAACCACTG
CAATTGCA-----AACTACTAATTCGTGGCGATGCCATGGCTAGGTTTGTGAGGGACTTCGCCTACGACAACGTCGCGAA
CAACCGGTATGTGGTTTTCGGCCGGTCAGAGA------------------------------------------------
--------------------------------------------------------------------------CAGAAT
CATGCGAGATACTCTGAATTGCTGCCATAGAT-AGCACCTCGGTGCTCCTGCTTATAT--TATAGATAGAAGAATGGACA
TATTGC--GAAGTTGTAGGCATGACAGATATGAGATGGCATGAACCGCCATC--ATTACTACCAATCCAATCTTAGCACT
GCTACCCTG-CCTCATGTGGCGCTCACCTACGGTAAGCATTTCTGCACTTACTCCTCTGTC-TATGTCCAAGCACTATGT
TCACAACGGAGAGCGCTGGGGTCAA-AGGCCG------------------------------------------------
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--------------------------------CGGAACCGTACTTGTGGCTTCACCGTGCCCGCGACGCGTCCTTGGGCA
TTTAGGATTTTGGCTTTTGTTGGGGCCGTGTGGTTGGCCCAAGAGAGGTCAACGTTGTGGAGAAAAATCCCGTGGCACGG
CGCGCTTTTGCTGCACAGGATCTGGATGGCCTCTTGCTCCGAGGACGTCCCCCGGATGTTGATGAACCTCGCGTCTGTTA
TGGCCACACCACCTTCCTGCAAACGCAGCCAATATGG-TTTCAGT----------------------------TGAGGTA
--GTGGTGGTGACTGAATTCAATTGAGTGGGTTTCCTCACCCGTTCTGGACAGTTTGCCTGGGGGCAATAGAACTGGTCA
ATGTCGATAGGATACCGTACTTCAGTCATGTTGAGGTCCCTGAAAAGGAACGTGTTCGCTTTGCCTCGCCCTCCCTGCAT
TTCTCATAACATCATTATAAGTTTGGGGAACATACTACATGGCGTA-----------------------TGCATGCAACC
ATCAGTTGG----TATCTTT-GAACTGATGCAAGGCACACACAT----------------GCATGTAGATGCGGCTTCAG
TGTTACCTGCCACGATTTGATCCTGACACCGGTCATCGTACTAAAGAAGTTGCAGTTGGATAGTGTAATTCTTTCCACCA
GCGCTGGTTTTTCACCGGCACCTCCAAGGCTTCCCACACTACACAACAA---GATCAGAAAAGCC-ACCTTCCTCAATGT
GATATGCTACTCACTAGAGAATGCTTATCAGAAATATATTATGCACTTGGTCAGCACAGGCCTGCA
>chr3D_5
----ATATATCGTGGGCAGCATTGCTGCCATGAACATTCTCCACATTTGTCATTATTTACTCTGAACTTTCCTCTTTTAA
CCTTGTCGTGTGTAGAGATTAGAACATCCACGGTGGAAATAAACGACGAATCGAGAGGCCGCCCATTCCAAAAGGCCAAG
GTAACAGAGAAGAAGAAACGATGTTTTATCAGCAGTGTGCCTTATTTCTTTGTTTGTCAATATATGCCAGTTCTCTTATG
TATGAAGTGTTACCG-----------AGACTGACTTACCTATGGATTCACACAGATTGAGATAGAGTTGGGAAAGAGCGA
GAAATTCGACGAGTTGATGGCCTCTGCTGCGGCAGATGCCGAAGAAGGCGAGGAGGAGGCCTGAAGAACCAAACAAAGCC
GTAGCGACTGCATCCTGTTGCTCTACTTTGTTATCGCTGTTGTTTAAAACTTTCAAAACCAATGCACGAGACATGGCGTG
TGTCCCTGTTTAACTTGTATTTTCGTAGTGTCAGTGTTTGTGAACTCTTTGTCTGATGAT-AATCTGTTTCGCGTGCATT
TCTT-GCTCCAAACCACTGGCTGGTTCGTATTGCTGGAAATAATCTTTTTCGCGTGTGCTCCGTTTGGTCCTATAATCTG
GT--GGCTCTACGTTTATAATCTTGTTGATTGATATTACTATGGTGCGAATGTACAGGCTGTGCTTCTCATGTAATTTTA
TTTTCCGTTTGGAC------------------------------------------------------------------
---------------------------------------------------------TTTGGAATGTGAAATTCTGGAAG
CAAAT----------GCAAACCCGTTTTACCCTGGCC-AAATTACCGGTTGCTGGACGTGCCACGTAGCCTGATGCGCAC
CGCGCGTTGGGCTGCGAAGAGAATGAAGCTTCAAACAAGCCACCGCACAGCAGGTACACGAGAGGAAGGAAAGAGGCGAT
GGCGACCATGGCCGGGCGCTACTGCTGCAGCTACTACAGCTCGCCC------TCTGCGCCGCCGCCCCAGCGGCAGCGCG
GGCCTCCGCTGCAGCTGCAACCGGCGGGAGGACGAGGACGGGGACTCCGGCGACCGAGCCTACGGGCGGTCGCGTCGGCG
GCGGCGGAGCCCGTGAAGGCGGCCACGGACGCCGAGTTCTTCCAGCCCGCCGACTCGAGGCCTATCATGCTCTTCGACGG
CGTGTGCAACCTGTGCAACGGCGGCGTCCGGTTCGTGCGGGAGCACGACCCCGGCCGGAGCATCAGGTACGTCCCCCTCC
AGAGCGACTCCGGGAGGAAGCTCCTGCGCCGGTCCGGCAGAAGCCCCGACGACATCTCCAGCGTCGTCCTCGTCGAGAAG
GACAGGTAACCATCGCC-------TCTAGCTGCTCTGCTATTGTCAATGGACATCAGCCATGGACCAAGT--GTGAGAAA
TGTTTTTTGGAAGTGCAGGTCATACATCAAGTCTGATGCCGTGCTGAGGATAATGGAGTACCTGAACCTGCCGTTCCCGC
AGCTCGCCGCGTTCCTCAAAATTGCCCCCCTGTAAGCTCAATTCACA----------------TTTCAACTGAACCACTG
CAATATAAGTAGCAATTACTGATTCGTTGCGATGCCATGGCTAGGTTTGTGAGGGACTTCGCCTACGACAACGTCGCGAA
CAACCGGTATGTGGTGTTCGGCCGGTCAGAGA------------------------------------------------
--------------------------------------------------------------------------CAGAAT
CATGCGAGATACTCTGAATTGCTGCCACAGAT-AGCACCTCGGTGCTCCTGCTTATATATTATAGATAGAAGAATGGCCA
TACATTGAGAAGTTGTAGGCATGACAGATATGAGATGGCATGAACCACCATCATATTACAACCAATCCAATTTTAGCACT
GCTACCCTG-CCTCACGTGTCGCTCACCTACGGTAAGCATTTCTGCACTTGCTCCTCTGTCTTATGTCCAAGCACTATGT
TCACAACGGAGAGCACTGGGGATCAGAGGCCG------------------------------------------------
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--------------------------------CGGAAGCGTACTTGTGGCTTCACCGTGCCCGCGACGCTTCCTTGAGCA
TTTAGGATTTTGGCTTTTGTTGGGGCCGTGTGGTTGGCCCAAGAGAGGTCCACGTTGTGGAGAAAAATCCCGTGGCACGG
CACGCTTTTGCTGCACAGGATCTGGATGGCCTCTTGCTCCGAGGACGTCCCCCGGATGTTGATGAATCTCGCGTCCGTTA
TGGCCACACCACCTTCCTGCAAACGCAACCAATATGATTTTCAGTTTCAATC-GTTGTCTTTCAGGATGCATCTGATGTA
--GTGGTGGTGACTGAATTCAATTGAATTGGTTTCCTCACCCGTTTTGGACAGTTTCCCTGGGGGCAATAGAACTGGTCG
ATGTCGATAGGATACCGTACTTGAGTCATGTTGAGGTCCCTGAAAAGGAACGTGTTCGCTTTGCCTCGCCCTCCCTGCAT
TTCTCATAACATCAT-ATAAGTTTGGGGAACATACTACCA--------------------------TGGTGTATGCAACC
ATCAGTTGG----TATCTTTTGAACTGAT----GGCACACACAT----------------GCGTGTAGATGCGGCTTCAG
TGTTACCTGCCACGATTTGATCCTGACACCGGTCATCGTATTGAAGAAGTTGCAGTTGGATACTGTAATTCTTTCCACCA
GCGCTGGTTTTTCACTGGCACCTCCAAGGCTTCCCACACTACACAATAA---GATCAAAAAAGCC-ACCTTGCTCAATGT
GATATGCTACTCACTAGAGAATGCTCATCGG-AATATATTTTGCACTTGGTCAGCACAGGCCTGCA
>chr3A_46
---------------------------------------------TTTATCATTATGTGCTCTGAACTTTCCTCTTTTAA
CCTTGATGTGTGTAGAGATTAGGACATCCACAGTGGAAATAAATGACGAATCTAGAGGCCGCCCATTCCAAAAGGCCAAG
GTCAGAGAA-----------------GAACAACAGTTTGGCTTGTCTCTTTGGTTGCCAGTG--TGTCATTTCTCTGATG
TATGAAATTCGACTTA---ACAACTAAAACTGACATGGATATATGTTCACGCAGATTGAGATAGAGTTGGGGAAGAGCGA
GAAATTCGACGAGTTGATGGCCTCTGCTGCGGCAGACGCCGAAGAAGGCGAGGAGGAGGCCTGAAGAACCAAACAAAGCC
GTAGCGACCGCATCCCGTTGCTCTACTTTGTTTCCGCTGTTGTTTAAAAC-TTCAGAACCAATGCATGAGACATGGCGTG
TGTCCCTGTTTAACTTGTATTTTCTTAGTGTCAGTGTTTGTGAACTCTTTGGCAGATGATGAATCTGTTCCGCGTGCATT
TTTTTTCTCCAAACCGCTG-------------GCTGGAAATAATCTTTTTCGCGTGTGCTCTGCTTGGTCCC--AATCTG
GT--GGCTCTACGTTTATAATGTTGTTGATGGATACCACTATGGTGCAAATGCAAGCGCTGTCCTTCTCATGTAATTTT-
--------------------------------------------------------------------------------
-------------------------------------------------------AGTTTGGAATGTGAAAGTCTGGGAG
CAAATCCGCTCGGCTGCAAGCCCGTTTTACCCTGGCCA-AATTACCCGTTGCTGGACGTGCCACGTAGCCTCAGGCGCAC
CGTGCGTTCGGCTCCGAAGAGAATGAAGCCTCAA-CAAGCCACTGCACAGCAGATACACGGGAGAAACGAAGGAGGCGAT
GGCGACCATGGCCGGGCGCTACTGGTGCAGCTAC---AGCTCGCCT------TCTGCGCCGCCGCCCCAGCGGCAGCGCG
GGCCTCCGCTGCAGCCGCGACACACGGGAGGACGGGGAAGGGGACTCCGGCGACCGAGCCTACGGGCGGCCGCGTCGGCG
GCGGGGGAGCCCGTGAAGGCGGCCACGGACGCCGAGTTCTTCCAGCCCGCCGACTCGAGGCCCATCATGCTCTTCGACGG
CGTGTGCAACCTCTGCAACGGCGGCGTCCGGTTCGTGCGGGAGCGCGACCCTGGCCGGAGCATCAGGTACATCCCCCTCC
AGAGCGACTCCGGGAGGAAGCTCCTGCGCCGGTCCGGCAGAAGCCCCGACGACATCTCCAGCGTCGTCCTCGTCGAGAAG
GACAGGTAACCATCGCC-------TCTAGCTGCTCTGCTATTGTTAATGGACATCAGCCATGGACCAAGT--ATCAGAAA
TGTTGTTGCT--GTGCAGGTCCTACATCAAGTCTGAAGCTGTGCTGAGGATAATGGAGTACCTCAACCTGCCGTTCCCGC
AGCTCGCCGCGTTCCTCAAAATTGCCCCTCTGTAAGCTCAATTCACACACACACG--GCATGCTTTCAATTGAACCACTG
CAATTGCA-----AACTACTAATTCTTGGCGGTGCCATGGCTAGGTTTGTGAGGGACTTCGCCTACGACAACGTCGCGAA
CAACCGGTATGTGGTGTTCGGCCGGTCAGAGACAGAATCATGCGAGATACTCTGAATTGGTGCCGCAGATAAGCACCTCA
GTGCTCTTGCTTATAGTATTATAGATAGAAGAATGGCCATACATTGAGAAGTTGTAGGCATGACAGATATGAGACAGAAT
CATGCGAGATACTCTGAATTGATGCCGCAGATAAGCACCTCGGTGCTCCTGCTTATATATTATAGATAGAAGAATGGCCA
TACATTGAGAAGTTGTAGGCATGACAGATATGAGATGGCATGAACCACCATC--ATTACAACCAATCCAATTTTAGCACT
ACTACCCTG-CCTCACGTAGCGCTCACCTATGGTAAGCATTTCTGCACTTGCTCCTCTGTC-TATGTCCAAGCACTATGT
TCACGACGGAGAGCACTTCTGATCAGAGGCCA------------------------------------------------
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--------------------------------CGGAAGCGTACTTGTGGCTTCACCTTGCCCGCGACTCTTCCTTGGGCA
TTTAGGATTTTGGCTTTTGTTGGGGCCGTGTGGTTGGCCCAAGAGAGGTCCACGTTGTGGAGAAAAATCCCGTGGCATGG
CACGCTTTTGCTGCACAGGATCTGGATGGCCTCTTGCTCCGAGGACGTCCCCCGGATGTTGATGAATCTTGCGTCCGTTA
TGGCCACACCACCTTCCTGCAAATGCAGCCAATATGG-TTTCAGT----------------------------TGAGGTA
--GTGGTGGTGACTGAATTCAATTGAGTGGGTTTCCTCACCCGTTCTGGACAGTTTCCCTGGGGGCAATAGAACTGGTCG
ATGTAGATAGGATACCGTACTTCAGTCATGTTGAGGTCCGTGAAAAGGAACGTGTTCGCTTTGCCTCGCCCTCCCTGCAT
TTCTCATAACATCAT-ATAAGTTTGGGGAAAATACTACCA--------------------------TGGTGTATGCAACC
ATGGGTTGG----TATCTTT-GAACTGAC----GGCACACACAT----------------GCATGTAGATGCGGCTTCAG
TGTTACCTGCCACGATTTGATCCTGACACCGGTCATCGTATTAAAGAAGTTGCAGTTGGATACTGTAATTCTTTCCACCA
TCGTTTGTTTTTCACCGGCACCTCCAAGGCTTCCCACACTACACAATAA---GGTCAAAACAGCTAACCTTGCTCAATG-
--TATGCTACTCAGTAGACAATGCTTATCAGAAATATCTTATGCACTTGGTAAGCACAGGCCTGCA
>chr3B_1874
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-----------------------------------------------CCATC--CTTACAGCCAATCCAATTTTAACACC
ACTACCCTGACCTTACATGGCGCTCACCTAAGGTAAGAATTTTTGCAC-TGCTCCTCTGTC-TATGTCCAAGCACTATGT
TCACAACAAAGAGCACTCGGGATCAACGGCCC------------------------------------------------
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--------------------------------AAGAACTGCACTTGTGGCTTCACCTTGCCCGCGACGCTCCCATGGGCA
TTCATAATCTTGGCTTTTGGTGGAGCAGTGTGTTTACACCATGATAGGTCGACATTATCGAGATAGATGTCGTGGCACGG
CACGCTATTGCTGCACATGATCTTGATAGCCTCTCGCTCGGAGGACGTCCCATGGATGTTGATGAACCTCGCGTCCGTTA
TGGCCACACCACCTTGCTGCAAAGGCAACCAATATAA-TTTCAGTCTCAACC-ATTGCCCTGAAGATGGAGCGGTCAA--
-TGTGGTGGTGACTGAG-----TTGAGTAGGTTTCCTTACCCGTTCTGGACAGTTTCCATGTGGACAATAGAACTGGTCG
ATGTCGATAGGATGTTGGACTTCAGTCATGTTGAGGTCCCTGAAAATGAATCCGCTCGCTTTGCCTTGCCCGCCCTGCAT
TT---ACAACATCAT-ATATGTTATCAGGGGAATTAATAGTGGTATATATGCCTATGGCTT-GCAGTGGTGTGTGCAACC
ATCAGTTGA----TATCTTT-GATCTGATGCAAGGCACACACATGCACAACACAGAGAAGGCATGTAGATGCTGCTTCAG
TGTTACCTGCCAAGATTTGATCCTGACACCGTTCGTCGTGTTAAAGAAGTTGCAGTTGGATACTGTAATCCTCTCCACCA
TCGCTGGGCCTTCACCAGCACCTCCAAGGCTTCCCACACTACATAACAA---GA--------------------------
------------------------------------------------------------------
>chr3D_1874
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-----------------------------------------------CCATC--CTTACAGCCAATCCAATTTTAACACC
ACTACCCTGACCTTACATGGCGCTCACCTAAGGTAAGAATTTTTGCAC-TGCTCCTCTGTC-TATGTCCAAGCACTATGT
TCACAACGAAGAGCACCGGGGATCAACGGCCCGG----------------------------------------------
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-------GAAGAGCACTGGGGATCAGCGGCCCAAGAACCGCACTTGTGGCTTCACCATGCCCGCGACGCTCCCATGGGCA
TTCATAACCTTGGCTTGTGGTGGAGCAGTGTGTTTACACCATGATAGGTCGACATTATCGAGATAGATGCCGTGGCACGG
CACGCTTTCGCTGCACATGATCTTGATGGCCTCTCGCTCGGAGGACGTCCCGTGGATGTTGATGAACCTCGCGTCCGTTA
TGGCCACACCACCTTGCTGCAAAGGCAACCAACATAA-TTTCAGTCTCAACC-ATTGCCCTGAAGATGGAGCGGTCAACA
ATGTGGCGGTGACTGAGTTGAGTA----GGTTTTCCTTACCCGTTCTGGACAGTTTCCTTGGGGGCAATAGAACTGGTCG
ATGTCGATAGGATGTTGGACTTCAGTCATGTTGAGGTCCCTGAAAATGAATCCGTTCGCTTTGCCTTGCCCTCCCTGCAT
TC---ATAACATCAT-ATATGTTACGAGGGGAATTAATAGTGGTATATATGCCTATGGCTTTGCAGCGGTGCGTGCAACC
ATCAGTTGA----GATCTTT-GAACTGATGCAAGGCACACACATGCACAACATTGAGAAGGCATGTAGATGCTGCTTCAG
TGTTACCTGCCACGATTTGATCCTGACACCGCTCGTCGTATTGAAGAATTTGCAGTTGGATACTGTAATCCTCTCCACCA
TCGCTGGGCCTTCACCGGCACCTCCAAGGCTTCCCACACTAAATAATAACAAGATAAAAAAAGC----------------
------------------------------------------------------------------
>chr3A_1874
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-----------------------------------------------CCATC--CTCACATCCAATCCAATTTTAACACT
ACTACCCTGACCTTACATGGCGCTCACCTAAGGTAAGAATTTTTGCAC-TGCTCCTCTGTC-TATGTCCAAGCACTATGT
TCACAACGAAGAGCACTGGGGATCAACGGCCCGAGAACCACACTTGTGGCTTCACCGTGCCCGCGACGCTCCCATGGGCA
TTCAGAACCTTGGCTTTTGGTGGAGAAGTGTGTTTACACCATGATAGGTTGACATTGTCGAGATAGATGTCGTGGCGTCA
ACGGCCAGCCACTCGTCATCGCCTTTCATGTTGCGGATGTCAACGCTCCCATCAACATGCTCAATGAGACGGTAGGAGCG
GAAGAGAAGCGCAAAGTAGGTGCGCCAAGCGTTGTAGGAAGGGGAGTCGAGCTCGAGGATGACGGGAACATGGTCCTTGA
TGGGAAGTTCGTTGAGACGGTCGGAGGTGAACGCAAGGACGGTGGTGGAGCTGCCGAGGGAGGAGTTGGATCCCACCATG
ATGATGCAAACGGCGGCGGCTGGGGGAAGGCTTTAGGGTTTGGCGGCAGCGGCGGCTTGGGAGAGAGCAGCGGTGGCGGC
CGCGTGTGAGGGTTAGGGTTTTGGTGCGGCAGCGGCGGCTTGGGAGAAGTGGCGGTGGCGGCGGTGGCTTGGGGAGCAAG
CAGCGGCGCCAGGAGAGAGGAGGCGGCCACGGCGTGAGACGCGGCGGCGGCCTAGGGCAGAAGCGATGGAGATCGGTAGA
AAACTGATACCATGTAGAAGACTATAGGATGCAACTCGATTGTATTCATTGGAGTCTGTTACAATATATACAGGTGGTGT
CTTGCGTGATAAGCCAACTGACTCTACAATATCTCTAGGAATCAGCTTTACAAGGTTAGAGATAATATGAGAATCAGTCG
GTAATAAATACAGAGATATCACGGTTCAACAGAGAAAACAATGATTTTCAAATTGCGACGAATCCGAACAAGAACCGTAG
AAAATGGCACTCACTTCGTCCTATTCACACTTGTAGAAAATCCATCCGGAATGTTTCGGCGTGCTCGAGATGAGGCGCAA
CACCAGCTGCGAGCAATGATCACAGTTGATGACCGGTAGAGGTACACCGACTAGTTGTTGGGAAATGGCTGAGCCCGGGT
GACGGGGGACGGGACGATGTCTGTGGTCGATCGACGCTTGAGATGCAAGCGGCAAGAGAGGACATACCAAGAGGCGGCAG
GGGAGCGGTCGAGGTGGATGCATGGTTTGGTTTCCGTCAAATCCCTCCAAAACGTAATGACACCTTGGTTGCGTCGAATC
TGATGGTGGCGGCGACTGCCGTAGTTCCGTCAATTTAGGCACCGCCAACGATGAGAACCGACTGAATCGAGGTGGGGGAG
GAGCGCGGAAGGTGCTATGGGGAGTCGTCGATGGCTCGTGGTGGACGGCGGAGGCATGTAGGGCGACGCCAGAGTGGATG
CGATGCAGGGTGGGGAGGGTGTGGCCAAGGGGGAGAGGAACGTTTTTTACTCCGTGGGTGGGTGGCCGAGTATATTTAAG
AGTCTGGACGTCCAAGGAGGATAATTGTTACTCCTCGGGATCGGTTAGGTGCAGGTTAGAGAAGTAAAAGTGAAATTTTA
CTCCTCTTTAGCTTTTTAGGGGATCGGTTTGAGATGCTCCAAGGCTTTGAACAACTCATGGTGTCTAGAGAGATGTTTAG
TAAAATAGGCTGAGTTTTTCTCAAGCACTAGTGCTTATTTCTACAGAAGGGGTACCTAATTAATCCTCTATCCTTTACAT
ATAAGCACGGTGCTTAAAAAAACGGTTTATTTCTCTAGATACTTCCTAAGCACCTTGCATTGTACAAGGCATAAGGGCTT
CCGTGAGGGAAGACTAAATCTTATATTTTCCTCATGAACATTGATTATATATAGCTTTTAATAGTTCTTATAGATGATCT
ACCCAATATGATTGGTGGAGCTATCGGGACTTCAGGCATGTCCACAATCACTAGATCAATAAGAGTTGGACATCCATAAC
TTTGAACAACATACATTGTGCTTGATGCCTACAACTTGTGTGTATGTGTAGTCGGCCATAACTACCATCCTTACAGCCAA
TCCAATTTTAACACTACTACCCTGACCTTACATGGCGCTCACCTAAGGTAAGAATTTTTGCACTACTCCTCTGTCTATGT
TCACAACGAAGAGCACTGGGGATCAACGTCCCAAGAACCGTACTTGTGGCTCCACCGTGCCCGCGACGCTCCCATGGGCA
TTCAGAGCCTTGGCTTTTGGTGGGGCAGTGTGCCTACAACAGGATAGGTCGACATTATCGAGATAGATGTCGTGGCATGG
CACGCTATTGCTGCACATGATCTTGATAGCCTCTCGCTCGGAGGACGTCCCATGGATGTTGATGAACCTCGCGTCGGTTA
TGGCCACACCACCTTGCTGCTAAGGCAACCAATATAG-TTTCAGTCTCAACCAATTGCCCTGAAGATGGAGCGGTCAA--
-TGTGTTGGTGACTGAG-----TTGAGTAGGTTTCCTTACCCGTTCTGGACAGTTTCCATGCGGGCAGTAGAACTGGTCG
ATGTCGATAGGATGTTGGACTTCAGTCATGTTGAGGTCCCTGAAAATGAATCCGCTCGCTTTGCCTTGCCCTCCCTGCAT
TC---ATAACATCAC-ATATGTTATCAGGGGAATTAACAGTGGTATACACACACACACACACACACAC---------ACC
ATCAGTTGATATCTATCTTT-GAACTGATGCAAGGCACACACATGCACAACATAGAGAAGGCATGTGGATGCTGCTTCAG
TGTTACCTGCCACGATTTGATCCTGACGCCGTTGGTCGTATTGAAGAATTTGCAGTTGGATACTGTAATCCTCTCCACCA
TCGCTGGGCCTTCACCAGCACCTCCAAGGCTTCCCACACTACATGACAA---GATAACAAAAG-----------------
------------------------------------------------------------------
>SNPs
SSSS-------S---S-----S-------------S-----------------S---------S----------------
-----S----------------------------------------------------------------------S---
-----------------------------------------------------S-------------S-S----------
----------S----SSSS----S-----------S---S-SS------S------------------------------
--------------------------------------------------------------------------------
---------S---------------------------------------------------------S------------
---S-S-----------------------------------------------------------S------S-------
----------S---S------------------------S--------------------------------------S-
-SSS------------S----S--------------------------------S--------S---------------S
----SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
--------------------------------S-----------------------------------------------
-----S--------S--------SSS-SS--SSS--------------------------------S-------------
----------------------------------------------SSSSSS-----------------S----------
----------------------------------------------------S---------------------------
--------------------S-----S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
------------SSS-SSSSSSSS--S-----------SS-----S--S--------------S-S-SSSSS--------
----S----SSSS-----------------------S-------------------------------------------
-----------------------------S------------------------SSS-----------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S-------------------------------------------------S--
--SSSS----------------------------------------S------------S-----------S--------
---------------S----------------------------------S-----------------------------
--------------S------SSS--------------------------------------------------------
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---------------------------------------------------------------------S----------
--------------------------------------------------S-----------------------------
-S-------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------S----------------------S
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---------------S-----------------------SS-SSSS----------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------S-----------------
---------------------------------------------------------S-------------S--------
------------------------------------------------------------------
>forward_824
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----TCCCATGCTTCAGACTTGCC--------------------------------------------------------
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>reverse_4761
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----------------------------------------GGCGTATGCATGCAACCATC--------------------
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------------------------------------------------------------------
