>input_sequence_69277
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--------------------------------------------------------------ATGGCTGGGCGTGGACTT
TTAGCTGCAGGTTTGGTC---CTCCTCGCCGCCGTCGCCCCGGCCTACGCCGCGGACTACACCGTCGGCGACTCGTCGGG
CTGGGCTAGCGGCGTGGACTACAGTACCTGGGCAAGCGACAAAACCTTCACCGTCGGTGACACGCTCGGTACGTGGTGCA
GTACGACGATCATTGCTAGTACCAACGGTTCTCTTATTGATATTGGA---CCTCAAGTAGAGCACAGCCCTACCAGTTTG
ACAAAATGGTTCATGTACTGTAGTCCTCCAGTACGTACTTA---------------------------------------
---------------------------CTGATTAGTTT-CTTTGTGTGCTTGCAGTGTTCCAGTACGGCGCGTCGCACAA
CGTGGCGGAGGTGGGGTCGTCGGACTACAGCGCCTGCTCCGCCACCAACTCCATCCAGTCGTTCAGCGACCAGGACACCA
AGGTCACGCTCACCAAGCCCGGCACGCGCTACTTCATCTGCGGCGTCAGCGGCCACTGCTCCGGCGGCATGAAGCTCGCC
GTCAAGGTCGCCCCCGCAGCCGCCACCACGCCCACCCCGGCCACCTCGCCCGACGCGCCTTCGGCGACACCCTCCACGCC
TTCGGAGACGCCCTCCACGCCTTCGGAGACGCCCTCGACGTCCACGACCCCTGCCGGGGCGACAACTGCGCCTTCCTCGT
CCAAATCAGCGGACAGCGTCGGCGGGGCCAGCGGTGTCGAGGCCCGCTCTGTGATGGGCTCTCTGGTTGGGGCCGCGGGC
CTTGTCGGCCTCGCCCTGATGGGCTAG-----------------------------------------------------
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----------------
>chr6D_1_TraesCS6D01G224500
TCCGTTGTACACAGTACTTTTAGTTCAGCATGGTTATTTAAGACAAACTGGGTGATCCAGCAGAGCTCCTGATCCAGCCC
AGCCCACGTCCAGCCCAGTTGTAATTCGGCAAGGCTGCTAACAACGATGCCTACCACCTCACCTCACCTTACCTTATACC
TCACCTAAAGCTAATCAATGATCGGAGGACGAAGATCAAGGTCAA-ACAAGAAATGCACATGCATGAATTAGAATGATTG
GTTTGTTCAACGGTTCAACCAACATTTGCCACCTAGCTGTCTTCTCCTTGTACTTTCTTTGACCTCTTTCGGCTACTGAA
AGAGCTTTCTTTCCAAATTATGCACATTTG-TACAAACGGTCTATTTGTTATGTCATCTGTTTTGCGTTCCTTGATGTTC
TATTATCAAATTATTACACATGC-TTTTCAGTTCAGACAGTTCTATAAAAAATGATGGTACTGCCTCTTCGGTTCCATAA
TATAAAAGCATTTTTAGCGCTAGTGTAGTGCCAAAAACAATCTTATATTATAAGACGGAAGAAGTAGTAGCAAAGAAAAT
TTACCCTGCTAATTTGCGGTTGCTGATATTCGCGCATTAATTA---AACTTGTACCAACCTCTAACATGAAATTAGCTGG
TCAATATGAGCGTTGAAGCC----------AAAAAAGTGGCTGTAACGACTGATGAACATTGCTTTCTTTAGCGCTAACG
TATTTGACGTGATAGTGTGATCAACTAAACCCCATCGGTATCAGTGTAGCCCGCTTGGCACTAGTGATTTGTTCAAGGAA
TCAGGGTCGGGGGACGGTAGAGTTGTTGACGAGCACAACTAACCCAACTGCACCCGAACAAACCAAACCAAATCGCGTTA
GTCAGTATACTAACTGCACCGCTTCGCTGAGCCTATATAGCCAGTAACCGCGGGTCCATCACCTGCCATCCTTGTACTCG
CATTGCA------CAGCAAAGTCTCCAAGAATTCAAAGCCTCCAAGACCTTAACTTGATATCATGGCTGGGCGTGGACTT
TTAGCTGCAGGTTTGGTC---CTCCTCGCCGCCGTCGCCCCGGCCTACGCCGCGGACTACACCGTCGGCGACTCGTCGGG
CTGGGCTAGCGGCGTGGACTACAGTACCTGGGCAAGCGACAAAACCTTCACCGTCGGTGACACGCTCGGTACGTGGTGCA
GTACGACGATCATTGCTAGTACCAACGGTTCTCTTATTGATATTGGA---CCTCAAGTAGAGCACAGCCCTACCAGTTTG
ACAAAATGGTTCATGTACTGTAGTCCTCCAGTACGTACTTA---------------------------------------
---------------------------CTGATTAGTTT-CTTTGTGTGCTTGCAGTGTTCCAGTACGGCGCGTCGCACAA
CGTGGCGGAGGTGGGGTCGTCGGACTACAGCGCCTGCTCCGCCACCAACTCCATCCAGTCGTTCAGCGACCAGGACACCA
AGGTCACGCTCACCAAGCCCGGCACGCGCTACTTCATCTGCGGCGTCAGCGGCCACTGCTCCGGCGGCATGAAGCTCGCC
GTCAAGGTCGCCCCCGCAGCCGCCACCACGCCCACCCCGGCCACCTCGCCCGACGCGCCTTCGGCGACACCCTCCACGCC
TTCGGAGACGCCCTCCACGCCTTCGGAGACGCCCTCGACGTCCACGACCCCTGCCGGGGCGACAACTGCGCCTTCCTCGT
CCAAATCAGCGGACAGCGTCGGCGGGGCCAGCGGTGTCGAGGCCCGCTCTGTGATGGGCTCTCTGGTTGGGGCCGCGGGC
CTTGTCGGCCTCGCCCTGATGGGCTAGGCAAGAGACTGTGCTTTGTTTCCCTTCTCCGAATTGTCCAGTCCGCGTTTCC-
----------------------------------TTCTTCCCGCCGAGTTGCACACTGTGTGCTA-----TGGCTCCTCT
TTATCTGGGGCCTTTTCATTTGTGCTCTGTTCTGTTCTGTGG-TAGATCCTCCGATTCGACCGCTACTCGTGCTTGTACG
AGCACTTTGAAATATAGACTCTCCATGCCTGTG--TTGTGACGTGTCTTGCGAAATCGTGTTATCGGAT-----------
----------------------------GTACGCGTGCATGCTGGCGTGGGGATCCGACGGTCCACGTGAAGATGATTTG
TATTACCGCCGGTACTTGTAAGGTACACGTCTATTGAACACAAAAGTTTAGATAATCAATAT-ATACCATATTAAAAAAA
AGTAAACTTACAAAACTATGTAGAGTCATATATGTGCATAATGTAGATGTGGGTTTAATTCTCGTAACATTTAGTTGTGT
CACACCCGTTTGATTTGCCCTTAAATTCAA-AA-ACT-CTCGTTTTTGTCCAAGCTCGTTTGGTCCTCTTATACTTTTGT
CCTTTGACCGTTTGACCGACATTTTGAAAAC-TTCATAACGGATTCATACTAACTCTGAAAAA-TATAAATAAGATATCA
AAATGTTTAC-AAAAGCATCACCTAT---------------GCATTCATGAAAAAA-GTGTTGG----------------
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----------------------------------------------------AAAGTTCCC-ATCTCAGTTTGAGCTCAT
ATGATCACATCATGAACAGTAAAAT-CCA-AAAAAGATGATAATACATTCA-AAAAATCAAG-AAATTTTTTGTGTCAAA
CATTGATAAATGTTTTGAGTGATTTTAAAGTTTCATCATGTAATGACATTCATGGAAGTCGTGGCAAAAAA---ACTA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGCTGATTT--G-TTTTTTTGCCACGACTGTCATGTATGCCATTCCA
TGATGAAACTTTCCAAGCGCTCAAAAAAATCGTCAATGTTTGCCATAGAAAAAATTCAGAATTTGATGAATTTTTTATCA
TTTTTTGGGATTTT--
>chr6A_1
TCCGTTGTACACAGTACTTTTAGTTCAGTGCGGTTATT-AAGACAAACTGAGTGATCCTGCAGAGCTCCTGA--------
--------TCCAGCCCAGTTGTAATTCGGCAGGGCTGCTAACAACGATGCCTACCGCCTCACCTCACCTTACCTTATACC
TCACCTAAAGCTAATCAATGATCGGAGGACGAAGATCAAGGTCAATACAAGAAATGCACATGCATGAATTAGAATAATTG
GTCTGTTCAACGGTTCAACCAACATTTGCCACCTAGCTGTCTTCTCCTTGTACTTTCTTTGACCTCTTTCGGCTACTGAA
AGAGCTTTCTTTCCAAATTATGCACATTTACTACAAACGGTCTATTTGCTATGTCATCTGTTTTGCGTTCCTTGATGTTC
TGTTATCAAATTATTACACATGTTTTTTCAGTTTAGACAGTTCTATTAAAAATGGTACCA--------------------
-------------------------------------------------------------------TAGCAAAGGAAAT
TTACCCTGCTAATTTGCAGTTGCTGATATGTGGGCATTAATTATTTAACTTGTACCAACCTCTAACATGAAATTAGCTGA
TCAATATGACTATATGAGTGTTGAAGCCAAAAAAAAGTGGCTGTAACGACTGATGAGCATTGCTTTCTTTAGCGCTAACG
TATTTGATGTGATAGTGTGATCAACTAAACCCCATCGGTATCGGTGTAGCCCGCTTGGCACTAGTGATTTGTTCAAGGAA
TCAGGGTCGGGGGACGGTAGAGTTGTTGACGAGCACAACTAACCCAACTGCACCCGAACAAACCAAACCAGATCGCGTTA
GTCAGTGTACTAACTGCACCGCTTCGCTGAGCCTATATAGCCAGTAACCGCGGGTCCATCACCTGCCATCCTTGTACTCA
CATTCCAGCTCCACAGCAAAGTCTCCAAGAATTCAAAGTCTCCAAGACCTTAACTTGCTATCATGGCTGGGCGTGGACTT
TTAGCTGCAGGTTTGGTCCTCCTCCTCGCCGCCGTCGCCCCGGCCTACGCCACGGACTACACCGTCGGCGACTCGTCGGG
CTGGGCTAGCGGCGTGGACTACAGCACCTGGGCAAGCGACAAGACCTTCACCGTCGGTGACACGCTCGGTACGTGGCGCA
GTACTACGATCATTGCTAGTATCAACGGCGCTCTTAGTGATAGTACTGGCCCTCAAGTAGAGCACAGTGCTACCGGCTTG
GCAAAATGGTTCGTGTACGTGCCAGCGCAGGCATGACTTGTTCGCCGGTGCACGTATTGTGTAGGCCGGCTTTCG-----
-------------TTGTGTAGGCCGACCTGACTGGTTTCCCATGTGTGCGTGCAGTGTTCCAGTACGGCGCCTCGCACAA
CGTGGCGGAGGTGGGGTCGTCGGACTACAGCGCCTGCTCGGCCACCAACTCCATCCAGTCGTTCAGCGACCAGGACACCA
AGATCACGCTCACCAAGCCCGGCACGCGCTACTTCATCTGCGGCGTCAGCGGCCACTGCTCCGGCGGCATGAAGCTCGCC
GTCAAGGTCGCCCCCGCAGCCACCGCCACGCCCACCCCGGCCACCTCGCCGGACGCGCCTTCGGCGACACCCTCCACGCC
TTCGGAGACGC---------------------CCTCGACGTCCACCACCCCGGCCGGGGCGACAACGGCGCCTTCCTCGT
CCAAATCAGCGGACAGCGTTGGCGGGGCCAGCGGTGTCGAGGCCCGCTCCGTGATGGGCTCTCTCGTTGGGGCCGCGGGC
CTTGTCGGCCTCGCCCTGATGGGCTAGGCAAGAGGCAGTGCTTTGTTTCCCTTCTCCGAATTGTCCAGTACACGTTTT--
--------------------------------TTTTCTTCCCGCCGAGTTGCACACTGTGTGCTACTA--TGGCTCCTCT
TTATCTGGGGCCTTTTCATTTGTGCTCTGTTCTGTTCTGTGG-TAGATCCTCCGATTCGATCACGACTCGTGCTTGTACG
ACCACTTTGAAATATAGATTCTCCATCTGTCTGTCTTGTGACGTGTCTTGCGAAATCGTGTTATCGGAT-----------
----------------------------GTACGAGTGCATGCTGGCGTGGGGATCC------------------------
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>chr6B_82
--------------------------------------------------------------------------------
-GCCCACGTCCAGCCCAGTTGTAATTCTGCAAGGCTGCTGACAACGATGCCTACCACCTCACCTCACCTCACCTC--ACC
TCACCTAAAGCTAATCAATCATCGGAGGACGAAGATCAAGGCCAATAGACG-AATGCACATGCATGAATTAGAGTAATTG
GTTTGTTCAACGGTTCAACCAACATTTGCCACCTAGCTGTCTTCTCCTTGTACTTTCTTTGACCTCTTTCAGCTACTGAA
GGAGCTTTCTTTCCAAATTATGCACATTTCCTACAAACTGTCTATTTGTTATGTCATCTGTTTTGCATTCCTTGATGTTC
TGTTATCAAATTATTACACG------------TTAGACAGTTCTATTAAAAATGATGGTAC-------------------
----------------------------------------------------------------TAGTAGCAAAGAAAAT
TTACACTGCTAATTTGTAGTTGCTGATATTTACGCATTAATTATTTAACTTGTACCAATCTGTAACATAAAATTAGCTGG
TCAATATGAGTGGTGAAACC----------AACATAGTGGCTGTAACGACTGATGAATATTGCTTTCTTTAGCGCTAACG
TATTTGATGTGATGGTGTGATCAACTAAACCCCATCGGTATCAGTGTAGCCCGCTTGGCACTAGTGATTTGTTCAAGGAA
TCGGGGTCGGGGGACGGTAGAGTTGTTGACGAACACAACTAACCCAACTGCACCCGAACAAACCAAACCAAATCGCGTTA
GCCAGTATACTGACTGCACCGCTTCGCTGAGCCTATATAG-CAGTAACCGCGGGTCCATCACCTGTCATCCTTGTACTAG
CAT------TCCACAGCAAAGTCTCCAAGAATTCAAAGCCTCCAAGACCTTAACTTGCTATCATGGCTGGGCGTGGACTT
TTAGCTGCAGGTTTGG---TCCTCCTCGCCGCCGTCGCCCCGGCCTACGCCGCGGACTACACCGTCGGCGACTCGTCGGG
CTGGGCTAGCGGCGTGGACTACAGCACCTGGGCAAGCGACAAAACCTTCACCGTCGGTGACACACTCGGTACGTGGTGCA
GTACTAGGATCATTGCTAGTATCAACGGTGCTCTTGGTGATACTGGA---CCTTAAGTAGAGCACAGTGCTACCAGCTTG
GCAAAAGGGTTCATGTACACGCCAGCGCATGCATGACTTGTTCGCCGGTGCACTGTAGTAGTAGCAGCAGCAGCAGCTAG
CAGTACGGCGCTATTGTTTAGGCCGACCTGATTGATTT-CCATGTGTGCGTGCAGTGTTCCAGTACGGCGCGTCGCACAA
CGTGGCGGAGGTGGGGTCGTCGGACTACAGCGCCTGCTCTGCCACCAACTCCATCCAGTCGTTCAGCGACCAGGACACCA
AGATCACGCTCACCAAGCCCGGCACGCGCTACTTCATCTGCGGCGTCAGCGGCCACTGCTCCGGCGGCATGAAGCTCGCC
GTCAAGGTCGCCCCCGCGGCCACCACCACGCCCACCCCGTCCACCTCGCCAGAC---------------------ACGCC
TTCGGAGACGCCCTCCACGCCTTCGGAGACGCCCTCCACGTCCACGACCCCGGCCGGGGCGACAACGGCGCCTTCCTCCT
CCAAATCAGCGGACAGCGTCGGCGGGGCCAGCGGCGTCGAGGCCCGCTCCGTGATGGGCTCTCTGGTTGGAGCTGCAGGC
CTTGTCGGCCTCGCCCTGATGGGCTAGGCAAGAGGCAGTGCTTTGTTTCCGTTCTCCGAATTGTTCAGTTCACGTTTTCT
TCTTCCCTTGCCTCAAAAAAAAAAAAAAAACGTTTTCTTCTTCCCGAGTTGCACACTGCGTGCCTCCCCGTGGCTCCTCT
TTATCTGGGGCCTTTTCATTTGTGCTCTATTCTGTTGTGTGGTTAGATCCTCCCATTCGATCGGGACTCGTGCTTGTATG
ATCACTTTGAAATATGGACTCTCCATGTTGGTG--CTGTGACGTGTCTCGCCAAATCTTGTTATCTTTTCTTTTTTTTGA
GATAGGCCAAATCGTGTTATCAGATGTAGTACGAGTGCATGCTGGCGTGGGGATCCGACACTCCACGTGATTAACTAGCC
AGTACTA----------GTAATGTACACGTGTATTAAACATGAAAGTTTAGATAATCATCGACATACCATATTAT-AAAA
AGTAAACTTACAAGTGTG----GAGTCATATATGTGCATAATGTAGATGTGGGTTTAATTCTCGTA--------------
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>chr6D_2213
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----------------------------------------------------------------------TTAGTTTTGT
CACACCCGTTTGATTTACCCCTAAATTCAAAAA-GCC-CTCGTTTCTGTCCAAGCTCATTTGCTGCTGTTATGCTTTTGC
CCTTTGACCGTTTGACCGACACTTTGAAAAC-TTCATAACAAATTCATACTAACTCCAAAAAA-TGCGAATAAGATATCA
AAATGTTTAG-AACAACATCACCTATATGTTCATGCCATTTGCATTCATGAA-AAAAGTGTTCA----------------
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----------------------------------------------------AAAGCACCC-ACCTTAGTTTGAGCTCAT
ATAATCTTAGCATGACTAGTAAATT-ACG-AAAAAAATGATTTTTTTTTAA-AAAAATTGA--ATTGTTTTTCTGGCAAA
CATTGACAAATGTTTTGAGTGATTATGAAGATTCATCATTAAATGACATTCGTGGAAGTCGTGGCAAAAAAAAAACTA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGCTGATTTT-GTTTTTTT-GCCACAATTTCCATCTATGTCATTCCC
TTATAAAACTTTCCAAGCGCTAAAAACATTCTTCAATGTTTTCCACACAAAAAATTCAGAATTTTTTGATTTTTTATCAT
TTTTTTGAATTTT---
>chr6D_2213
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----------------------------------------------------------------------TTAGTTGTGT
CACACCCGTTTTATTTGCCCCTAAATACAAAAA-ACC-CTCATTTCTATCCAAGC-----CGCTCCACTTATGCTTTTAC
CCTTTGACCGCTTGACCGACATTTTGAAAAC-TTCATAACGAATTCATACTAACTCCGAAAAA-TACAAGTAAGATATCA
AAGTGTTCAAAAAAAACATCATCTATATGTGCATGTCATTTGCATTCATGAA-AAAAGTGTTCA----------------
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----------------------------------------------------AAAGC-CCC-ATCTCAGTTTGAGCTCAT
ATGATCTTAGCATGAATAGTAAAAT-TCAAACAAAGTGATAAAAATTTAAA-AAATTCTGA------TTTTTTTGGCAAA
CATTGACAAATGTTTTGAGTGATTACAAAGTTTCATCATGAAATGACATTCGTGGAAGTTGTGGCAAAAAA---ACTA--
AA-TTGATGCTTCAAAGCAAAAGCATTTTGGAGTGTTGATTTT-GTTTTTTTC--CATGACTTCCATCTATGTCATTCCC
ATATGAAAATTTCCAAGCGCTGAAAACATTTGTCAATG------------------------------------------
----------------
>chr6D_2213
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----------------------------------------------------------------------TTAGTTGTGT
CACACCCGTTTGATTTGCCCCTAAATTCAAAAA-AAAACTCGTTCCTACCCAAGCCCGTTTGCTCCACTTATGCTTTTGC
CCTTTGAC--------CGACACTTTGAAAAC-TTCATGACAAATTCATACTAACTCCCAAAAC-TGCAAATAAGAAATCA
TTTTTTTTAG-AAAAACATCACCTATATGTGCATGCCATTTGCATTCATGAC-AAA-GTGTTCG----------------
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----------------------------------------------------AAAGTCCCC-ATCTCAGTTTGAGCTCAT
ATGATCTCAGCATGAATAGTAAAAT-CCC-AAAAAATGATAAAAAATTCATCAAATTCTGA--ATTTTTTCTATGGCAAA
CATTGACGATTTTTTTGAGCGCTTGGAAAGTTTCATCATGGAATGGCATACATGACAGTCGTGGCAAAAAA---AC-A--
AA-TCAGCACTCCAAAATGCTTTTGTTTTGGAGCATCAATTTA-G-TTTTTTTGCCACGACTTCCATGAATGTCATTACA
TGATGAAACTTTAAAATCACTCAAAACATTTATCAATGTTTGACACAAAAAATTTCTTG--ATTTTTTGAATGTATTATC
ATCTTTTTTGGATTTT
>chr6B_2213
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----------------------------------------------------------------------TTAGTTGTGT
CACACCCGTTTGATTTGCCCC-AAGTTTAAAAA-ACC-CTCGTCTCTATCCAAGCTCGTTCGCTCCACTTATGCTTTTGC
CCTTTGACCGTTTGACCGACACTTTGAAAAC-TTCATAATGAATTAATACTAACTCCGAAAAA-TGCAAATAAGATATCA
AAATGTTCAG-AACAACATCACCTATATGTGCATGCCATTTGCATTCATGAA-AAAAGTGTTCA----------------
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----------------------------------------------------AAAGC-CCCCATCTTAGTTTGAGCTCAT
ATGATCTCAGCATGAATAGTAAAAT-T--AAAAAAATGATAAAA-ATTCAAAAAATTCTGA--ATTTTTTGTGTGGAAAA
CATTGACAAATGTTTTTAGCACTTGGAAAGTTTTATAAGGGAATGCCATAGATGGAAATTGTGGCAAAAAA---ACAA--
TA-TCAGCACTCCAAAATGCTTTTGTTTTGGAGCATCAATTTAGTTTTTTTTTGCCACGACTTCCAAAAATGCCATTTCA
TGATGAATCTTTATAATCACTCAAAACATTTGTCAATGTTTGCCACAAAAACAATTCA----------------------
----------------
>chr1B_2213
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----------------------------------------------------------------------TTAGTAGTGT
CACACCCGTTTGATTTGCCCCTAAATTCAAAAA-ACC-CTCATTTCTTTCCAAGCCTGTTCGCTCCACTTATTTTTTTGC
CCTTTGACCATTTGACTGACACTTTGAAAAC-TTCATAATGAATTCATACTTTCTTTAAAAAA-TACAAATAAGATATCA
AAATGTTCAG-AAAAGTATCACCTATATATGCATGTCATTTGCATTCATGAG-AAAAGTGTTCA----------------
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----------------------------------------------------AAAGCGCCC-ATCTCAGTTTGAGCTCAT
ATGATCTTAGCATGAATAGTAAAGT-TCAAACAAAATGATAAAACATTCAAAAAATTCTGA--ATTGTGTGTGTGGAAAA
CATTGACAAATGTTCTAAGTGATTATAAAGTTTCATTATGAAATGATATTCATTAAAGTCGTGG-AAAA---AAACTA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGTTGATTTT-G-TTTTTTTGCCACGACTTCCATCTATGTCCTTCCC
TTATAAAACATTCCAAGCACTGAAAATATTTGTCAATATTTTCCACAAAATCAATTAAGATTTTTTTTGAATTTTTTATC
GTTTTGTTTGAATTTT
>chr5D_2213
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----------------------------------------------------------------------TTAGTTGTGT
CACACCCGTTTGATTTGCCCCTAAATTCAAAAA-ACC-CTCGTTTCTGTCCAAGCCCGTTCGCTCCACTTATGCTTTTGC
CCTTTGACCGTTTGACCGACACTTTGAAAAA-TTCATAACAAATTCATACTAACTCCAAAAAA-TACAAATAAGATATCA
AAATGTTCAG-AAAAACATCACCTATGTGTGCATGCCATTTGCATTCATGA--AAAAGTGTTCA----------------
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----------------------------------------------------AAAGCCCCC-ATCCCAGTTTGAGCTCAT
ATGATCTTAGCATGAATAGTAAAAT-TCAAACAAAATGATAAAAAAATTTA-AAAAATTCTG-AATTTTTTTGTAGCAAA
CATTGACAAATGTTTTTAGCACTTGGAAAGTTTCATAAGGGAATGACATAGATGGTAGTCATGGCAAAA---AAAAAACA
AAATCAACACTCCAAAATGC-TTTGTTTTGGAGCATCAATTTA-GTTTTTTTTGCCACGACTTCCATGAATGTCATTTCA
TGATGAAACTTTATAATCACTCAAAACATTTGTCAATGTTTGCCGCACAAAAAATTAG--AATTTTTTGAATTTTTTATC
ATTTT-----------
>chr1B_2214
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-----------------------------------------------------------------------TAGTTGTGT
CACACCCGTTTGATTTGCCCCTAAATTCGAAAA-ACC-CTCATTCCTATCCAAGCTCGTTTACTCCTCTTATGCTTTTGC
CCTTTGACCGTTTGACCGTCACTTTGAAAAG-TTCATAACGAATTCATACTATGTCATAAAAAATTCAAATAAGATA-CA
AAATGTTCAA-AAAAATGTCACCTATATCTGCATGCCATTTACATTCATGAC-AAAAGTGTTGG----------------
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----------------------------------------------------AAGGCCCCC-ATCTCAATATGAGCTCAT
ATGATGTCAACATGAATAATAAAAT-CCAAAAAAATTGAAAACACATTAAA-AAATTCCGA--ATTCTTTTACTGGCAAA
CATTGACAAATGTTTTGACTGATCGCAAAGTTTCATCATGGAATGACATTTATGGAAGTCATGGCGAAA---AAAACA--
AAATCAACACTCTAAAATGCTTTTGTTTTGGAGCATCAATTTT-A-TTTTTTTGCCATGACTTCCATGAATGCCATTCCT
TGATGAAACTTTGCGATGACTCAAAACATTAGTCAATATTTGACACTAAAAATATTCAGAATTTTTTGAATCTATTTCCA
TTTTTT----------
>chr1B_2214
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-----------------------------------------------------------------------TAGTTGTGT
CACACCCGTTTGATTTGCCCCTAAATTAAAAAA-AAC-CTCGTTTCTGTCCAAGCTCGTTTGCTCCTCTGATGCTTTTGT
CCTTTGACCCTTTGAACGTCACTTTAAAAAC-TTCATAACAAATTCATACTAACACAGAAAAA-TTCAAATAAGATATCA
AAATGTTCAG-AAAAACATCACCTATATCTCCATGTCATTTACATTCATGAA-AAA-GTGCTGGAAGGTCTGTTGGGGAA
CGTAGCAGAAATTCAAAATTTTCCTACGTGTCACCAAGATCTATCTATGGAGAAACCAGCAACGAGGGGAAGGAGAGTGC
ATCTACATACCCTTGTAGATCACTAAGCGGAAGCGTTCAAGTGAACGGGGTTGATGAAGTCGTACTCGTCGTGATTCAAA
TCACCGATGATCAAGTGCCGAACGCACGTCACCTCCGCGTTCAACACACGTACAGCCCGGTGACGTCTCCCACGCCTTGA
TTCAGCAAGGAGAGAGGGAGAGGTTGAGGAAGACTCCATCCAACAGCAGCACAACGGCGTGGTGGTGGTGGAGGAGCGTG
GCAATCCAGCAGGGCTTCGCCAAGCACCATGGGAGAGGAGGAGTAGGGAGAGAGGTAGGGCTGCGCCAGAACTTCGTGTA
TAGCTCCCATGCGCCTCCCCACTATATATAGGGGTGGAGGGGCTGGTTTCTTGCCCTCCAAGTCCATTGGGGCGTTGTCC
AAGGTGGGAGGAAAGAAATCTCATTATTTCCTTCCCCACCGATTGTTATCCCCCCTTTTTAGGGATCTTGATCTTATCCC
TTCGGGATATGATCTTATTCCTTCTAAGGGGGGATCTTGGTGCGCCTTGACCAGGGGTGTGGGGCCTTGACCCCACTACC
CACGTCCATGTGGGTCCCCCCATGCAGGTGGGCCCCACTCCGGAACCTTCTAGAACCTTTCCGGTACAATACCGAAAAAT
CCCGAACATTTTCCGGTGGCCAAAATAGGACTTCCCATATATAAATCTTTACCTCCGGACCATTCCGGAACTCCTCGTGA
CGTCCGGGATCTCATCCGGGACTCCGAACAACATTCGGTAACCACATACAAACTTCCTTTATAACCCTAGCGTCATCGAA
CCTTAAGTGTGTAGACCCTACAGGTTCGGGAGACATGTAGACATGACCGAGACGTTCTCCGGTCAATAACCATCAGCGGG
ATCTGGATACCCATGATGGCTCCCACATGTTCCACGATGATCTCATCGAATGAACCACGATGTCAAGGACTTAATCAATC
CCGTATTCAATTCCCTTTGTCTATCGGTATGTTACTTGCCCGAGATTCGATCGTCGGTATCCAATACCTTGTTCAATCTC
GTTACCGGCAAGTCACTTTACTCGTTCCGTAACACATCATCCCGTGATCAACTCCTTGGTCACATTGCGCATATGATGAT
GTCCTACCGAGTGGGCCCAGAGATACCTCTCCGTTTACACGGAGTGACAAATCCCAGTCTCGATCCGCATAAAACAATAG
ATATTTTCGGAGATACCTGTAGTGCACCTTTATAGTCACCCAGTTACGTTGTGACGTTTGATACACCCAAAGCACTCCTA
CGGTATCCAGGAGTTACACGCTCTCTTGGTCGAAGGAAGAGATACTTGACATTGGCAAAGCTCTAGCAAATGAACTACAC
GATCTTTTGTGCTAGTCTTAGGATTGGGTCTTGTCCATCACATCATTCTCCTAATGATGTGATCCCGTTATCAACGACAT
CCAATGTCCATAGCCAGGAAACCATGACTATCTATTGATCACAACGAGCTAGTCAACTAGAGGCTCACTAGGGACATATT
GTGGTCTATGTATTCACACGTGTATTACGATTTCCGGATAATACAGTTATAGCATGAATAAAAGACAATTATCATGAACA
AGGAAATATAATAATAATACTTTTATTATTGCCTCTAGGGCATATTTCCAACAAGGTCCCC-ATCTCAATTTGAGCTCAT
ATGATGTCAGCATGAATAGTAAAAT-TCAAAAAAAATGGAAATAGATTCAA-AAAATTCTGAATATTTTTA-GTGTCAAA
TATTGACTAATGTTTTGAGTCATCGCAAAGTTTCATCAAGGAATGGCATTCATGGAAGTCATGGCAAAA---AAATAA--
AA-TTGATGCTCCAAAACAAAAGCATTTTAGAGTGTTGATTTT-GTTTTTTTCGCCATGACTTCCATAAATGTCATTCCA
TGATGAAACTTTGCGATCAGTCAAAACATTTGTCAATGTTTGCCAGTAAAAGAATTCGGAATTTTTTAATGTGTTTTCAA
TTTTTTTGGATTTT--
>chr5B_2214
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TAATTGTGT
CACACCCGTGTGTTTTGCCCCTAAATTCAAAAA-ACC-CTCGTTTCTGCCCAAGCTCGTTTGCTCTTCTTATGCTTTTGC
CCTTT-ACCATTTGACCGCAACTTTGGAAAC-TTCATAATGAATTCATACTAACTTAGAAAAA-TACAAATAAGATATCA
AAATGTTTGG-AAAAACATCACCTATATGTGCATGTCATTTGCATTCATGAC-AAAAGTGCTGA----------------
--------------------------------------------------------------------------------
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----------------------------------------------------AAAGTCCCT-ATCTCAGCTTGAGCTCAT
ATGATGTTAACAAGAATAGTAAATGATGAAAAAAATTGAAAATAGATTCAA-AAAAATTTA--AATTTTTTTGTGGCAAA
CATTGAAAAATGTTTTGAGAGATTGCAAAGTTTCATGAGGAAATGACATTCATGGAAGTCGTGGAAAAA---AAGGAA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGCTGATTTT-TTTT-------CACGACTTCCATGAATGTCATTCCC
TGGTGAAACTTTATAAGTGCTCAAAACATTAGTCAATGTTTTCCACGAAAATAATTCAGAATGTTTTTGATTTTTTT---
----------------
>chr5A_2214
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-----------------------------------------------------------------------TAGTTGTGT
TACACCCGTTTGATTTGCCCTTAAATTCAAA-A-ACC-CTCGTTTTTGTTCAAGCTCGTTTGTTCCTCTTATAGTTTTGC
CCTTTGACTGTTTGATCGTCACTTTGAAACC-TTCATAACGAATTGATACTAACATAGAAGAA-TGCAAATAAGATATCA
AAATGTTCGG-AAAAACATCACCTGCATGTGCATTTCATTTACATTCATGAC-AAAAGTGTTGG----------------
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----------------------------------------------------GAAGTACCC-ATCTCAGTTTGAGCTCAT
ATGATGTCAACATGAACAGTAAAAA-TCAAAAGAAA-------------------AATCTG--GTCTTTTTGGTGGAGAA
AATG--CAAATGTTTTTAGTGATCAGAAAGTTTCATCAGGGAATGACATTCGTAGAAGTCGCGGCAAAA---AAGCAA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGTTGATTTT-TTTTTTT--GCGAAGACTTCCATGAATGTCATTCCC
TGATGAAACTTTATATGAGCTCAAACCATTAGTCATTGTTTGC-------------------------------------
----------------
>chr4D_2214
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-----------------------------------------------------------------------TAGTTATGT
CTCACTCGGTAG-TTTACCCCTAATTTCCAA-AAACC-CTCGGTTCTGCCCAAGTCACTTTGCTCCTCTTATGCTTTTGC
TATTTGATTGGTTGATCATCACTTTGAAAACTTTCATAACAAATCCATACTAACTCAGAAAAA-TGCAAA-AAGTTATCA
AAATGTTTAG-AAAAACATCACCTATATGTGCATGTCATTTGCATTCATGAA-AAAAGTGTTGG----------------
--------------------------------------------------------------------------------
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----------------------------------------------------AAAGTCCCA-ATCTAATTTTGAGCTCTT
ATGATTTCAACATGAACAGTAAAAT-CTT-AAAAATTGAAAACAAATTCTA-GAAATTCTAAAAAATTTTCATGGCCAAC
TATTGACCAACGTTTTAAGTGCTTGCCAAGTTTCATGAGGGAATGACATTTGTGGAAGTCATGGCAAAA---A---AA--
AA-TTGATGCTCCAAAACTAAAGCATTTTGGAGTGCTCATTTTATGTTTTT--TCCACGACTTCCACGAATGTCATTCCC
TAATGACACTTGGCAAGCACTCACAACATTGGTCAATGTTTGCCACAAAATATTTTTAGAATTGTTAGAATTTGTTTTCA
ATTTTTTTAGATTTT-
>chr2B_2215
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------------------------------------------------------------------------AGTTGTGT
CACACCCGTGTGTTTTGCCCCTCAATTCAAA-AAACC-CTCATTTCTGTCCAGGCTCGTTTGCTTCTCTTATGTTTTTGC
CCTTTGATCATTTGACCGCAACTTTGAAAAC-TTCATAACAAATTCATACTAACTCAGAAAAA-TGCAAATAAGATATCA
GAATATTCTG-AAAAACATCACCTATA-GTGCATGTCATTTGCATTGATGAC-AAAAGTGCTGA----------------
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----------------------------------------------------GAAGTGCCT-ATGTCAGTTTGAGCTCAT
ATGATGTCAGCGTGAATAGTAAATGATGAAAAAAATTGAAAACAAATTCAA-AAAATTCTGATATTTTTTCTGTGGCAAA
CATTGACAAATGTTTTGAGAGATTGCAAAGTTTCATGAGGAAATGACATTAATGGAAGTCGTGGAAAAA---AAGGAA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGCTGATTTTGTTTTTTT--GCCACGACTTCCATGAATGTCATTCCC
TGGTGAAACTTTATAAGTGCTGAAAACATTAGTCAATGTCTGCCACAAAAATAATTTAGATTTT----------------
----------------
>chr3D_2248
TTCG----------------------------------------------------------------------------
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-----------------------------AA-A-ACC-CTCGTTCCTGCCCAAACCACTTTGCTCGTGTTATGCATTTGC
CCTTTGACCATTTGACCATCACTTTCAAAAA--TCATAAAAAATTCATACTAATTCCAAAAAA-TGTGAATAAGATATCA
AAATGTTCAG-AAAAACATCACCTATACGTGCATGTCATTTGCATTCATGAA-AAT-GTGTTAGAAGGT-----------
--------------------------------------------------------------------------------
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---------------------------------------------------------TCCC-ATCTCCGATTGGGCTCCT
ATGATCTCACCATGAATAGTAAAAT-ACAAAAAAATTGAAAACAATTCTAA-AAATTCTATA-AAAAAATTGGTGGCAAA
CAATGACCAATGTTTTGAGTTCTTGCCAAGTTTAGTAAGGGAATGCCATTTGTGGAAGTCGTGGTAAAA---AAACAA--
AA-TTGATGCTCCAAAACAAAAGCATTTTGGAGTGCTAATTTTGTTTTTTG--GCCACGACTTCCATGAATGTCATTCCC
TGGTGAAACTTGGCAAGCACTCAAAACATTGGCGAATGTTTGCCACAAAACATTTTAAGAATTTTTAGAATTTTTTTCAG
GTTTT-----------
>SNPs
----------------------------SSS-------S-----------S-------S-------------SSSSSSSS
S-------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-S--------------------S----------S------------S--------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
-----------------S------------S-------------------------------------------------
----------S---------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
----S----------------S-------S------S-----S------------------------SS-------S---
S-----------------SSSSSSS-S-SS-S-S-SSS-SS---------------------------------------
---------------------------------S------SS-------S------------------------------
---------------------------------------S----------------------------------------
--S-----------------------------------------------------------------------------
---------------------S----------------------------S-----------------------------
---------------------------------------------------S--------------S-------------
-------------------------------------------------S------------------------------
----------------------------------S-S--------------------------------S-S-----S--
--------------------------------------------------------------------------------
------------------------------------------------------------S---S---------------
-S-------------------------SS---------------------------------------------------
---------------------------------S-------------------------SS---------SS-SSSSSSS
SS-SSSSSSSSSSSSSS----S--------S----S----SS----------------SSSS------------SS----
-------------SSS-SSSSS--------------------------------------------SSSS----------
------------------------------------S-------------------------S-----------------
-----------------------------------------S--------------------------------------
---------S------------------------------------------S---------------------------
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------S--S-----------------------------------S---S------------------------------
------S-----------------S---------------S---------------------------------------
--------------------------------------------------------------SS----------------
--------------------------S-S----------------S-S----------------SS----------S---
----------------
>forward_77
---------------------------------------------------------CAGCAGAGCTCCTGATCCAG---
--------------------------------------------------------------------------------
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----------------
>reverse_1145
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------TACCTGGGCAAGCGACAAAA------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_476
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------GGTACTGCCTCTTCGGTTCC----
--------------------------------------------------------------------------------
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----------------
>reverse_1810
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGTGATGGGCTCTCTGGTTG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>forward_1277
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TAGAGCACAGCCCTACCAGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_2244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---TACCGCCGGTACTTGTAAGG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
