>input_sequence_69264
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-----------------------------------------------------ATGGCTGCTGATCGGCGCCACCCGGCG
GTGAACGACGTGTACCTGACGCTCGTCGGCGCCAGCAACACCCTCGCCGACGTCCAGCGCCGCCTTGACCTCGAGTTCCG
TGCCTCCTACCCCGACCATGTTAGTAATCAAACTCCCCTTCCTCTCCTCTCTAGCCGCTTCCTTCCATGACAGGATCTGG
GTGACGGTTTCATTCAGGCAAACCCGGCGAAACTGGTAGGGCGAGTGAAGCGGGTGCAAGAGGAGGTGGCTGCGCTCAAG
GATCTCTGCCGCGACCTCCTCGCCCAGAAGCAGGTCAGTCAGATCCCCTTCTCGAATCCTCCACACCTTCTTCCAGGTTT
ACTGATCCCGTGATCCTGCGTGCGTGTGCAGGAGCTGATCGACATGATGCGCACGAGCCTGGCTGCGCAGCGGAGCGCCA
CACAACGGCTGCTCGCCTCCTCCGGGCTGCCCCTCATGACCGACGACGAGGAGGCCGCCTACGCCAGCCTCAAGCAGGTG
ACCCCCCACCCAAAAAACCCGCAATCTAGCTACAGGCCGTGAGAGATCTGATGAATTTGTTCGCTACTCTTTGTTTACGT
TGCAGGTGATCGACGAGTGGACTGATCAGCTGAAGCCAATGGCAGGTAGGTTTTCTTTGCTTTGCAGCAGTTCGTTGGAT
TTTGTGATGGGGAACTCACTCCAACTGGCCGTGGTTTCACTTGCAGGGGGTCCGGATGGGGAGAATGAAGACACCAACCA
GATCCTCTTCTCCGCAATCCTTTAG-------------------------------------------------------
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>chr2B_1_TraesCS2B01G172000
AGATATCTGCAAATTGCTTAATTCAGAACGTCTACTCTTAAGCCATGTAGATCTGGTTATCAAATGCTGACTTATTCAGT
AACTTTGCTCGCCACTTTTTTTCTTGTTTGTTGTCATCAAGCCGTGGCTTTGTTGTATTTTTTGTGTTGTGCAAATCATT
GGTTTACAGTCTATATATAAAATTGACTTGGATATGCGGTTGGATTCTGGCCAACATTTTCAATTGGTGGTTCCTCTAGG
AGCTTTATTGTTGGTTTGTGGCTGATGATTATTAGTGCGATGCAACTGGGGTGCTCTACTACAGGTTCTCTTCATAAAAG
GGCACTGTGGAAGTTATGCATTTGGTACAAATTAAATGCCTTTGGATAGCTAGTGAATTCTTCTAAGTTGCTCCTGTGTT
GCTTTAGCTTAACAATCAACCTTAGGTTTTAATGCAATGTAATGTGTTCTTTTAACTATGATAT---TCATTACATCAGT
TAGTCGCAAGAAAAGCAATTTCTGCTATAGTTGTTCAGTTCATATATGCGAAAGCTTATCTGTGAAATCATACCTTTGGT
ATTGGATTTGCTTACTACAAGCAGTACTATTTGTGATTCCCTGATACCGCCTAATATACAATTTCGTAGCGCTAGAAGTG
TATTTTTCACCTAGCAACGACTAAATACTACTCCCTCCGTCCGGAAATACTTGTCGGAGGAATGGATGTATCTAGATGTA
TTTTAGTTCTACATACATCCATTTTTATGCATTTCTCCGACAAGAATTTCTGGACGGAGGGAGTA--------TTTCCTT
ATATTACCGTTACAGTAGAATCATAACGCCCGAATTTCATTCATTTTTCTAACTAAAGATGAAATGATATAATTGCGTCA
TCACTAACCAATATACCTTAGGTTT-CCTTGCAGGATAGTGGGATCCCCTTCCATCC-CAATTTAAAAGCCAAGCGCTAG
CAGTGGCTGGAAGAAGAGATCCCTGCTTTCACTTCCATTGACCCAAACAAATCATGGCTGCTGATCGGCGCCACCCGGCG
GTGAACGACGTGTACCTGACGCTCGTCGGCGCCAGCAACACCCTCGCCGACGTCCAGCGCCGCCTTGACCTCGAGTTCCG
TGCCTCCTACCCCGACCATGTTAGTAATCAAACTCCCCTTCCTCTCCTCTCTAGCCGCTTCCTTCCATGACAGGATCTGG
GTGACGGTTTCATTCAGGCAAACCCGGCGAAACTGGTAGGGCGAGTGAAGCGGGTGCAAGAGGAGGTGGCTGCGCTCAAG
GATCTCTGCCGCGACCTCCTCGCCCAGAAGCAGGTCAGTCAGATCCCCTTCTCGAATCCTCCACACCTTCTTCCAGGTTT
ACTGATCCCGTGATCCTGCGTGCGTGTGCAGGAGCTGATCGACATGATGCGCACGAGCCTGGCTGCGCAGCGGAGCGCCA
CACAACGGCTGCTCGCCTCCTCCGGGCTGCCCCTCATGACCGACGACGAGGAGGCCGCCTACGCCAGCCTCAAGCAGGTG
ACCCCCCACCCAAAAAACCCGCAATCTAGCTACAGGCCGTGAGAGATCTGATGAATTTGTTCGCTACTCTTTGTTTACGT
TGCAGGTGATCGACGAGTGGACTGATCAGCTGAAGCCAATGGCAGGTAGGTTTTCTTTGCTTTGCAGCAGTTCGTTGGAT
TTTGTGATGGGGAACTCACTCCAACTGGCCGTGGTTTCACTTGCAGGGGGTCCGGATGGGGAGAATGAAGACACCAACCA
GATCCTCTTCTCCGCAATCCTTTAGAGAGAATGAAAACTTCTTGAGCATCGAACGATTTCTCTGTTGGAAGTTTTTCCTT
CCATCTTGTGTGCGTTTTTAGCAGATTGCGATGGGCTTGTCAATTAGTGTCTTGTTGAGTGTATATGAGAAAAACAGTGT
TGATTTCTTGGTTTGGGATGTTATTCCTGTTATGTATTTACATCCAGTGTTCTGCACACAGTTTTCTAGCTGGCTCATCA
TGCAGTGTATTTA-------------ACTCATCAGCTCTAACCACAAAAAAA-GATAGATTCGTGAGCGTCGTTCACTTT
TTTTTATGAGTAT-GAAGAAACATGGCAATGCATGTTTTGTTCTCTTTGTGCCTTTTCAAAAGCTAAATTGCACGAATCC
TAATGTGATTAAGATAATGTTGTCATTGGCATGGTTTAGAATCTGATCATTTTCCAACTCTTTTTTT--GAGAAATTGTC
TTTTAAAGATGAAAGAGCATGCTTATGTGTCTTAACTGTTAAAGGGCAGTTGGTGATACATTGGATGCCTGGCTGTGGCG
GATGAAGTGAGGTGAGAACATCTGTTGTGGCGCAGGAGAAAGCAGGCAATGCTGTGGCATGATGTCATCACGTGGTGCTA
GGGAAAAATCAATTATGGATGATCTAATGACACTGATACAATGACAACAATCGTCCAAATGTCTGTGTCTACTTCCTGCA
CCTGCTTGTTGAATGCCTGCTCCAAGCTTGTTGAATGCCTGCTCCATGTTCGGTAAAAATGATCGCCTTAGTTTTGCTGG
AAGACATGTGCTGCCTGTGCTTCATTTCATTAATATAGTATCAACCAGCTTGGCATGTATTCAGTTTTAATGAAGTGTT-
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--------------CTTATAATTGTGCAGGTGATGGGGGCAGAAGCTATTTTGGTCAACC-TCATCCACCTCTTGCTGTT
CCAGCGAAGTTTTG----TCTGCAAAGAAGACTAGGTAATCTGATAAGAGCTCATTGTTTATGATATTTAAATTTTGTGA
TTCAAATGATTTTTCATGCCCA
>chr2D_1
AGATATCTGCAAATTGCCTAATTCAGAACGTCTACTCTTAAGCCATGTAGATCTGGTTATCAAATGCTGACTTATTCAGT
AACTTTGCTCGCCACTTT-TTTCTTGTTTGCTGTCATCAAGCCGTGGCTTTGTTGTATTTTTTGTGTTGTGCAAATCATT
GGTTTACAGTCTATATATAAAATTGACTTGGATATGCGGTTGGATTCTGGCCAACATTTTCAATTGGTGGTTCCTCTAGG
AACTTTATTGTTGGTTTGCGGCTTATGATTATTAGTGCGATGCAACTGGGGTGCTCTACTACAGGTTC---TCATAACAG
GGCACTGTGGAAGTTATGCATTTGGTACAAATTAAATGCCTTTGAATAGCTAGTGAATTCTTCTAAGTTGCTCCTGTGTT
GCTTTAGCTTAACAATCAACCTTAGGTTTTAATGCAATGTAATGTGTTCTTTTAACTATGATGATACTCATTACATCAGT
TAGTCGCAAGAAAAGCAATTTCTGCTATAGTTGTTCAGTTCATATATGCGAAAGCTTATCTGTGAAATCATACCTTTGGT
ATTGGATTTGCTTACTACAAGCAGTACTATTTGTGATTCCCTGATACCGTCTAATATACAATTTCGTAGCGCTAGAAGTG
TATTTTTGACCTAGGAACGACTAAATAC----------------------------------------------------
---------------------------------------------------------------TA--------TTTCCTT
ATGTTACCATTACAGTAGAATCATAACGCCCGAATTTCATTCATTTTTCTAACTAAAGATGAAATGATATAATTGCGTCA
TTACTAACCAATATAGCTTAGGTTTT-CTTGCAGGATAGTGGGATCCCCTTCCATCCCCAATTTAAAAGCCAAGCGCTAG
CAGTGGCTGGAAGAAGAGATCCCTGCTTTCACTTCCATTGACCCAAACAAATCATGGCTGCTGATCGGCGCCACCCGGCG
GTGAACGACGTGTACCTGACGCTCGTCGGCGCCAGCAACACCCTCGCCGACGTCCAGCGCCGCCTTGACCTCGAGTTCCG
TGCCTCCTACCCCGACCACGTTAGTAATCAAACTCCCCTTCCTCTCCTCTCTAGCCGCTTCCTTCCATGACAGGATCTGG
GTGACGGTTTCATTCAGGCAAACCCGGCGAAACTGGTAGGGCGAGTGAAGCGGGTGCAAGAGGAGGTGGCTGCGCTCAAG
GATCTCTGCCGCGACCTCCTCGCCCAGAAGCAGGTCAGTCAGATCCCCTCCTCGAATCCTCCACACCTTCTTCCAGGTTT
ACTGATCCCGTGATCCTGCGTGCGTGTGCAGGAGCTGATCGACATGATGCGCACGAGCCTGGCTGCGCAGCGGAGCGCCA
CGCAACGGCTGCTCGCCTCCTCCGGGCTGCCACTCATGACCGACGACGAGGAGGCCGCCTACGCCAGCCTCAAGCAGGTG
ACCCCCCACCCAAAAAACCTGCAATCTAGCTACAGGCCGTGTGAGATCTGATGAATTTGTTCGCTACTCTTTGTTTACGT
TGCAGGTGATCGACGAGTGGACTGATCAGCTGAAGCCAATGGCAGGTAGGTTTTCTTTGCTTTGCAGCAGTTCGTTGGAT
TTTGTGATGGGGAACTCACTCCAATTGGCCGTGGTTTCACTTGCAGGGGGTCCGGATGGGGAGAATGAAGACACCAACCA
GATCCTCTTCTCCGCAATCCTTTAGAGAGAATGAAAACTTCTTGAGCATCGAACGATTTCTCTGTTGGAAGTTTTTCCTT
CCATCTTGTGTGCGTTTTTAGCAGATTGCGATGGGCTTGTCAATTAGCGTCTTGTTGAGTGTATATGAGAAAAACAGTGT
TGATTTCTTGGTTTGGGATGTTATTCCTGTTATGTATTTACATCCAGTGTTCTGCACACAGTTTTCTAGCTGGCTCATC-
------------A-------------ACTCATCAGCTCTAACCACAAAAAAAAGAGAGATTCGTGAGCGTCGTTCACT--
TTTTTATGAGTAT-GAAGAAACATGGCAATGCATGTTTTGTTCTCTTTGTGCCTTTTCAAAAGCTAAATTGCACGAATCC
TAATGTGATTAAGATAATGTTGTCATTGG-ATGGTTTAGAATCAGATCATTTTCCAACTTTTTTTTTGTGAGAAATTGTC
CTTTAAAGATGAAAGAGCATGCTTATGTGCCTTAACTGTTAAAGGGCAGTTGGTGATACATTGGATGCCTGGCTGTGGCG
GATGAAGTGAGGTGAGAACATCTGTTGTGGTGCGGGAGAAAGCAGGCAATGCTGTGGCATGATGTCATCACGTGGTGCTA
GGGAAAAATCAATTATGGATGATCTAATGACACTGATACAATGACAAAGATCGTGCAAATGTCTGTGTCTACTTCCTGCA
CCTGCTTGT----------------------TGAATGCCTGCTCCATGTTCGGTAAAAATGATCGCCTTAGTTTTGCTGG
AAGACATGTGCTGCCTGTGCTTCATTTCATTAGTATAGTATCAACCAGCTTGGCATGTATTCAGTTTTAATGAAGTGTT-
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--------------CTTATAATTGTGCAGGTA------GCAGAAGCTATTTTGGCCAA-C-TCATCCACCTCTTGCTGTT
CCAGCGAAGTTTTG----TCTGCAAAGAAGACTAGGTAATCTGATAAGAGCTCATTGTTTACGATATTTAAATTTTGTGA
TTCAAATGATTTTTCATGCCCA
>chr2A_1
AGATATCTGCTAATTGCCAAATTCAGAATGTCCACTCTTAAGCCATGCAGATCTAGCTACCAATTGCTGGATTATTCAGT
GACTTTGCTTGCCACTTT-TCTCTTGTTTGCTGT-ATCAAGCCGTGGCTTTGTTGTATTTTTTGTGTTGTGCAAATCATT
GGTTTACAGTCTATATAG--AATTGACTTGGATACTCGGCTGGATTCTGGCCAACATTTTCAATCGGTGGTTCCTCTAGG
AACTTTATTGTTGGTTTGTGGCTGATGATTATTAGTGCGATGCAACTGGGGTGCTCTACTACAGGTTCTCTTCATAAAAG
GGCACTGTGGAAGCTATGCATTTGGTACAAATTAAATGCCTTTGGATAGCTAGTGAATTCTTCTAAGGTGCTGCTGTGTT
GCTTTAGCTTAACAATCAACCTTAGGTTTTAATGCAATGTAATGAGTTCGTTTAACTATGATAT---TCATTACATCATA
CAGTTGCAAGAAAAGCAATTTCTGCTATAGTTCTTCAGTTCATATATGCGAAAGCTCATCTGTGAAATCTTACCTTTGGT
ATTGGATTTGCTTACTATAATCAGTACTATTTGTGATTCCCGGATACTGTCTAATATACAATTTCGTAGTGCTAGAAATG
TATTTTTGACCTAGCAACGACTAAATAC----------------------------------------------------
---------------------------------------------------------------TATCTTGGGATTTCCTT
ATGTTCTGG-TACAGTAGAATCATAACGCCCGAACTTCATTCATTTTTCTAACTAAAGATGAAATGATATAATTGTGTCA
TTACTAACTAATATAGCTTAGGTTTTCCTTGCAGGATAGTGGGATCCCCTTCCATCCCCATTTTAAAAGCCAAGCGCTAG
CAGTGGCTGGAAGAAGAGATCCCTGCCTTCACTTCCATTGACCCAAACAAATCATGGCTGCTGATCGGCGCCACCCGGCT
GTGAACGACGTGTACCTGACGCTCGTCGGCGCCAGCAACACCCTCGCCGACGTCCAGCGCCGCCTTGACCTCGAGTTCCG
TGCCTCCTACCCTGACCACGTTAGTAATCAAACTCCCCTTCTTCTCCTCTCTAGCCGCGTCCTTCCATAACAGGATCTGG
CTGACGGTTTCATTCAGGCAAACCCGGCGAAACTGGTAGGGCGAGTGAAGCGGGTGCAAGAGGAGGTGGCTGCGCTCAAG
GATCTCTGCCGCGACCTCCTCGCCCAGAAGCAGGTCAGTCAGATCCCCTTCTCGAATCCTCCACACCTTCTTCTAGGTTT
ACTGATCCCGTGATCCTGCGCGCGTGTGCAGGAGCTGATCGACATGATGCGCACGAGCCTGGCTGCGCAGCGGAGCGCCA
CGCAACGGCTTCTCGCCTCCTCCGGGCTGCCCCTCATGACCGACGACGAGGAGGCCGCCTGCGCCAGCCTCAAGCAGGTG
ACCCCCCACCCAAAAAACCCGCAATCTAGCTACAGGTCGTGAGAGATCTGATGAGTCTGTT-----CTCTTTGTTTACGT
TGCAGGTGATCGACGAGTGGACTGATCAGCTGAAGCCAATGGCAGGTAGGTTTTCTTTGCTTTGCAGCAGTTCGTTGGAT
TTTGTGACGGGGAACTCACTCCAACTGGTCGTGGTTTCACTTGCAGGGGGTCCGGATGGGGAGAATGAAGACACCAACCA
GATCCTCTTCTCCGCAATCCTTTAGAGAGACTGAAAACTTCTTGAGCATCGAACAATTTCTCTGTTGGAAGTTTTTCCTT
CCATCTTGTGTGCGTTTTTAGCAGATTGCGACGGGCTTGTCAATTAGCGTCTTGTTGAGTGTATATGAGAAAAACAGTGT
TGATTTCTTGGTTTGGGATGCTATTCCTGTTATGTATTTACGTCCAGTGTTCTGCACACAGTTTTCTAGCTGGCTCATC-
------------ATGCATTATATTTAACTCATCAGCTCTAATCACAAAAA-AAGAGAGATTTGTGAGCGTCGTTCACT--
TTTTTATGAGTATGGAAGAAACATGGCAATTCATGTTTTGTTCTCTTTGTGCCTTTTCAAAAGCTAAATTGT--GAATCC
TAATGTGATTAAGATAATGTTGTCATTGGCATGGTTTAGAATCTGACCATTTTCCAACCTTTTTTTGTTGAGAAATTGTC
CTTTAAAGATGAAAGAGCATGCCTATGCGGCTTAACTGTTAAAGGGCAGTTGGTGATACATTGGATGCCTGGCTGTGGCG
GATGAAGTGAGGTGAGAACATCTGTTGTGGTGCGGGAGAAAGCCGGCAATGCTGTGGCATGATGTCATAATGTGCTGCTA
GGGAAAAATCGATTATGGATGGTCTAATGATACTGATACAATGACAATGATCGTGCAAATGTCTGTGTCTACTTCCTGCA
CCTGCTTGT----------------------TGAATGCCTGCTCCATGTTCGGTAAAAATGATCGCCTTAGTTTTGCTGG
AAGACATGTGTTGCCTGTGCTTCATTTCATTAGTATAGTATCAACCAGCTTAGCATGTTTTCAGTTTTAATGAAGTGTTC
CTCTTAGGGAAAATTTTGCTTTTGCCACTCTAGATTTTGCCAATTTTCCTTATGCCACTCTAGATTTTGACATTTCACTT
CTGCCACTCTTAGTTTTTGACAATTATCACAATTGTCATTCCCGTGGCAAAAGCAAAATTTTCAGAGTGGCATTTGTGAT
AATTGTCAAAAGGTAAGAGTAGCAAAAACAAAACAAAATTATTTTGCTTTTGCCACTGAATGACAATTGTGATAATTATC
AAAAACTAAGAGTGGCAAAAGTGAAATGTCAAAATCTAGAGTGGCATAAGGAAAATTGGCAAAATCTAGAGTGGCAAAAA
CAAAATTTTCTCTTCTTATAACTGTGCAGGTGATGGGGGCAGAAGCTATTTTGGCCAA-CCTCATCCAGCTTTTGCTGTT
CCAGCGAAGTTTTATCTTTCTGCAAAGAAGACTAGGTAATCCAATAAGAGCTCATTGTTTACGATATTTAAATTTTGTGA
TCCAAATGATTTTTCATGTCCA
>SNPs
-----------------S--------------------------------------------------------------
------------------S-----------S-------------------------------------------------
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-S------------------------------------------------------------------------------
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-------------------------------------------------S------------------------------
-------S--------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
--S-----------------------------------------------------------------------------
-S-------------S----------------------------------------------------------------
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------------------S-------------------------------------------------------------
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-S------------------------------------------------------------------------------
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-----------------------------------------------S--------------------------------
-------------------------------------------------------------------------------S
SSSSSSSSSSSS-------------------------------------------S----------------------SS
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-----------------------------------------------------------S--------------------
S----------------------------S--------------------------------------------------
------------------------------S--S----------------------------------------------
-----------------------------------------------SS-----S-------------------------
---------SSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------
--------------------------------S-----------------------------------------------
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------------------------------------------------------S---S---------------------
-------------------------------------------------------------S------------------
----------------------
>forward_688
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----------------------------TACTCCCTCCGTCCGGAAAT--------------------------------
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>reverse_2506
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-------------------------GCTTGTTGAATGCCTGCTCC-----------------------------------
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